-
1
-
-
0031909497
-
Function of H2-forming methylenetetrahydromethanopterin dehydrogenase from Methanobacteriutn thertnoautotrophicutn in coenzyme F420 reduction with H2
-
Afting, C, Hochheimer, A., and Thauer, R. (1998). Function of H2-forming methylenetetrahydromethanopterin dehydrogenase from Methanobacteriutn thertnoautotrophicutn in coenzyme F420 reduction with H2. Arch. Microbiol 169,206-210.
-
(1998)
Arch. Microbiol
, vol.169
, pp. 206-210
-
-
Afting, C.1
Hochheimer, A.2
Thauer, R.3
-
2
-
-
0025333468
-
Cloning, sequence determination, and expression of the genes encoding the subunits of the nickel-containing 8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacteriutn thertnoautotrophicutn delta H
-
Alex, L. A., Reeve, J. N., Orme-Johnson, W. H., and Walsh, C. T. (1990). Cloning, sequence determination, and expression of the genes encoding the subunits of the nickel-containing 8-hydroxy-5-deazaflavin reducing hydrogenase from Methanobacteriutn thertnoautotrophicutn delta H. Biochemistry 29, 7237-7244.
-
(1990)
Biochemistry
, vol.29
, pp. 7237-7244
-
-
Alex, L.A.1
Reeve, J.N.2
Orme-Johnson, W.H.3
Walsh, C.T.4
-
3
-
-
0037119593
-
Proterozoic ocean chemistry and evolution: a bioinorganic bridge
-
Anbar, A. D., and Knoll, A. H. (2002). Proterozoic ocean chemistry and evolution: a bioinorganic bridgeScience 297, 1137-1142.
-
(2002)
Science
, vol.297
, pp. 1137-1142
-
-
Anbar, A.D.1
Knoll, A.H.2
-
4
-
-
67149096055
-
Genomic characterization of Methanomicrobiales reveals three classes of methanogens
-
doi:10.1371/journal.pone.0005797
-
Anderson, I., Ulrich, L. E., Lupa, B., Susanti, D., Porat, I., Hooper, S. D., Lykidis, A., Sieprawska-Lupa, M., Dharmarajan, L., Goltsman, E., Lapidus, A., Saunders, E., Han, C, Land, M., Lucas, S., Mukhopadhyay, B., Whitman, W. B., Woese, C, Bristow, J., and Kyrpides, N. (2009). Genomic characterization of Methanomicrobiales reveals three classes of methanogens. PLoS ONE 4, e5797. doi:10.1371/journal.pone.0005797
-
(2009)
PLoS ONE
, vol.4
-
-
Anderson, I.1
Ulrich, L.E.2
Lupa, B.3
Susanti, D.4
Porat, I.5
Hooper, S.D.6
Lykidis, A.7
Sieprawska-Lupa, M.8
Dharmarajan, L.9
Goltsman, E.10
Lapidus, A.11
Saunders, E.12
Han, C.13
Land, M.14
Lucas, S.15
Mukhopadhyay, B.16
Whitman, W.B.17
Woese, C.18
Bristow, J.19
Kyrpides, N.20
more..
-
5
-
-
0032446788
-
Molybdenum-free nitrate reductases from vanadate-reducing bacteria
-
Antipov, A. N., Lyalikova, N. N., Khijniak, T. V., and Lvov, N. P. (1998). Molybdenum-free nitrate reductases from vanadate-reducing bacteria. FEBS Lett. 441,257-260.
-
(1998)
FEBS Lett
, vol.441
, pp. 257-260
-
-
Antipov, A.N.1
Lyalikova, N.N.2
Khijniak, T.V.3
Lvov, N.P.4
-
6
-
-
23944459271
-
Characterization of molybdenum-free nitrate reductase from haloalkalophilic bacterium Halotnonas sp strain AGJ 1-3
-
Antipov, A. N., Morozkina, E. V., Sorokin, D. Y., Golubeva, L. L, Zvyagilskaya, R. A., and Lvov, N. P. (2005). Characterization of molybdenum-free nitrate reductase from haloalkalophilic bacterium Halotnonas sp strain AGJ 1-3. Biochemistry 70, 799-803.
-
(2005)
Biochemistry
, vol.70
, pp. 799-803
-
-
Antipov, A.N.1
Morozkina, E.V.2
Sorokin, D.Y.3
Golubeva, L.L.4
Zvyagilskaya, R.A.5
Lvov, N.P.6
-
7
-
-
0345863540
-
Metabolism of inorganic N compounds by ammonia-oxidizing bacteria
-
Arp, D. J., and Stein, L. Y. (2003). Metabolism of inorganic N compounds by ammonia-oxidizing bacteria. Crit. Rev. Biochem. Mot Biol. 38,471-495.
-
(2003)
Crit. Rev. Biochem. Mot Biol
, vol.38
, pp. 471-495
-
-
Arp, D.J.1
Stein, L.Y.2
-
8
-
-
80054823349
-
Dual pathways for copper uptake by methanotrophic bacteria
-
Balasubramanian, R., Kenney, G. E., and Rosenzweig, A. C. (2011). Dual pathways for copper uptake by methanotrophic bacteria. J Biol. Chem. 286, 37313-37319.
-
(2011)
J Biol. Chem.
, vol.286
, pp. 37313-37319
-
-
Balasubramanian, R.1
Kenney, G.E.2
Rosenzweig, A.C.3
-
9
-
-
34547752024
-
Structural and mechanistic insights into methane oxidation by particulate methane monooxygenase
-
Balasubramanian, R., and Rosenzweig, A. C. (2007). Structural and mechanistic insights into methane oxidation by particulate methane monooxygenase. Ace. Chem. Res. 40, 573-580.
-
(2007)
Ace. Chem. Res.
, vol.40
, pp. 573-580
-
-
Balasubramanian, R.1
Rosenzweig, A.C.2
-
10
-
-
43049098834
-
Copper methanobactin: a molecule whose time has come
-
Balasubramanian, R., and Rosenzweig, A. C. (2008). Copper methanobactin: a molecule whose time has come. Curr. Opin. Chem. Biol 12,245-249.
-
(2008)
Curr. Opin. Chem. Biol
, vol.12
, pp. 245-249
-
-
Balasubramanian, R.1
Rosenzweig, A.C.2
-
11
-
-
77952093872
-
Oxidation of methane by a biological dicopper centre
-
Balasubramanian, R., Smith, S. M., Rawat, S., Yatsunyk, L. A., Stemmler, T. L., and Rosenzweig, A. C. (2010). Oxidation of methane by a biological dicopper centre. Nature 465, 115-119.
-
(2010)
Nature
, vol.465
, pp. 115-119
-
-
Balasubramanian, R.1
Smith, S.M.2
Rawat, S.3
Yatsunyk, L.A.4
Stemmler, T.L.5
Rosenzweig, A.C.6
-
12
-
-
34248655667
-
The bacterial metallome: composition and stability with specific reference to the anaerobic bacterium Desulfovibrio desulfuricans
-
Barton, L. L., Goulhen, F., Bruschi, M., Woodards, N. A., Plunkett, R. M., and Rietmeijer, F. J. M. (2007). The bacterial metallome: composition and stability with specific reference to the anaerobic bacterium Desulfovibrio desulfuricans. Biometals 20, 291-302.
-
(2007)
Biometals
, vol.20
, pp. 291-302
-
-
Barton, L.L.1
Goulhen, F.2
Bruschi, M.3
Woodards, N.A.4
Plunkett, R.M.5
Rietmeijer, F.J.M.6
-
13
-
-
77954639120
-
Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context
-
Bartossek, R., Nicol, G. W., Lanzen, A., Klenk, H. P., and Schleper, C. (2010). Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context. Environ. Microbiol. 12, 1075-1088.
-
(2010)
Environ. Microbiol.
, vol.12
, pp. 1075-1088
-
-
Bartossek, R.1
Nicol, G.W.2
Lanzen, A.3
Klenk, H.P.4
Schleper, C.5
-
14
-
-
0035140081
-
Influence of Ni, Co, Fe, and Na additions on methane production in Sphagnum-dominated Northern American peatlands
-
Basiliko, N., and Yavitt, J. B. (2001). Influence of Ni, Co, Fe, and Na additions on methane production in Sphagnum-dominated Northern American peatlands. Biogeochemistry 52, 133-153.
-
(2001)
Biogeochemistry
, vol.52
, pp. 133-153
-
-
Basiliko, N.1
Yavitt, J.B.2
-
15
-
-
0000455076
-
Adsorption and uptake of nickel in Methanothrix concilii
-
Baudet, C, Sprott, G. D., and Patel, G. B. (1988). Adsorption and uptake of nickel in Methanothrix concilii. Arch. Microbiol. 150, 338-342.
-
(1988)
Arch. Microbiol.
, vol.150
, pp. 338-342
-
-
Baudet, C.1
Sprott, G.D.2
Patel, G.B.3
-
16
-
-
3042513819
-
Nitrosomonas europaea expresses a nitric oxide reductase during nitrification
-
Beaumont, H. J. E., Van Schooten, B., Lens, S. I., Westerhoff, H. V., and Van Spanning, R. J. M. (2004). Nitrosomonas europaea expresses a nitric oxide reductase during nitrification. J Bacterial 186, 4417-4421.
-
(2004)
J Bacterial
, vol.186
, pp. 4417-4421
-
-
Beaumont, H.J.E.1
Van Schooten, B.2
Lens, S.I.3
Westerhoff, H.V.4
Van Spanning, R.J.M.5
-
17
-
-
0041318860
-
Insights into the respiratory electron transfer pathway from the structure of nitrate reductase A
-
Bertero, M. G., Rothery, R. A., Palak, M., Hou, C, Lim, D., Blasco, E, Weiner, J. H., and Strynadka, N. C. J. (2003). Insights into the respiratory electron transfer pathway from the structure of nitrate reductase A. Nat. Struct. Biol. 10,681-687.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 681-687
-
-
Bertero, M.G.1
Rothery, R.A.2
Palak, M.3
Hou, C.4
Lim, D.5
Blasco, E.6
Weiner, J.H.7
Strynadka, N.C.J.8
-
18
-
-
18844481026
-
A marine microbial consortium apparently mediating anaerobic oxidation of methane
-
Boetius, A., Ravenschlag, K., Schubert, C. J., Rickert, D., Widdel, E, Gieseke, A., Amann, R., J0rgensen, B. B., Witte, U., and Pfannkuche, O. (2000). A marine microbial consortium apparently mediating anaerobic oxidation of methane. Nature 407, 623-626.
-
(2000)
Nature
, vol.407
, pp. 623-626
-
-
Boetius, A.1
Ravenschlag, K.2
Schubert, C.J.3
Rickert, D.4
Widdel, E.5
Gieseke, A.6
Amann, R.7
J0rgensen, B.B.8
Witte, U.9
Pfannkuche, O.10
-
19
-
-
77952061155
-
Biochemistry: getting the metal right
-
Bollinger, J. M. (2010). Biochemistry: getting the metal right. Nature 465, 40-41.
-
(2010)
Nature
, vol.465
, pp. 40-41
-
-
Bollinger, J.M.1
-
20
-
-
33748600673
-
Heavy metals in bog waters: an alternative way to assess atmospheric precipitation qualityGlob
-
Bragazza, L. (2006). Heavy metals in bog waters: an alternative way to assess atmospheric precipitation qualityGlob. Planet. Change 53, 290-298.
-
(2006)
Planet. Change
, vol.53
, pp. 290-298
-
-
Bragazza, L.1
-
21
-
-
0034049124
-
A novel type of catalytic copper cluster in nitrous oxide reductase
-
Brown, K., Tegoni, M., Prudencio, M., Pereira, A. S., Besson, S., Moura, J. J., Moura, I., and Cambillau, C. (2000). A novel type of catalytic copper cluster in nitrous oxide reductase. Nat. Struct. Biol. 7, 191-195.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 191-195
-
-
Brown, K.1
Tegoni, M.2
Prudencio, M.3
Pereira, A.S.4
Besson, S.5
Moura, J.J.6
Moura, I.7
Cambillau, C.8
-
22
-
-
0018924387
-
Oceanographic distributions of cadmium, zinc, nickel, and copper in the North Pacific
-
Bruland, K. W. (1980). Oceanographic distributions of cadmium, zinc, nickel, and copper in the North Pacific. Earth Planet. Sci. Lett. 47, 176-198.
-
(1980)
Earth Planet. Sci. Lett.
, vol.47
, pp. 176-198
-
-
Bruland, K.W.1
-
23
-
-
34249279832
-
Did the Proterozoic Canfield Ocean cause a laughing gas greenhouse
-
Buick, R. (2007). Did the Proterozoic Canfield Ocean cause a laughing gas greenhouseGeobiology 5, 97-100.
-
(2007)
Geobiology
, vol.5
, pp. 97-100
-
-
Buick, R.1
-
24
-
-
0020800205
-
Precipitation, chelation, and the availability of metals as nutrients in anaerobic digestion
-
Callander, I., and Barford, J. (1983a). Precipitation, chelation, and the availability of metals as nutrients in anaerobic digestion. I. Methodology. Biotechnol. Bioeng. 25, 1947-1957.
-
(1983)
I. Methodology. Biotechnol. Bioeng
, vol.25
, pp. 1947-1957
-
-
Callander, I.1
Barford, J.2
-
25
-
-
0020800178
-
Precipitation, chelation, and the availability of metals as nutrients in anaerobic digestion
-
Callander, I., and Barford, J. (1983b). Precipitation, chelation, and the availability of metals as nutrients in anaerobic digestion. II. Applications. Biotechnol. Bioeng. 25, 1959-1972.
-
(1983)
II. Applications. Biotechnol. Bioeng.
, vol.25
, pp. 1959-1972
-
-
Callander, I.1
Barford, J.2
-
26
-
-
79960619274
-
Model of the molecular basis for hydroxylamine oxidation and nitrous oxide production in methanotrophic bacteria
-
Campbell, M. A., Nyerges, G., Kozlowski, J. A., Poret-Peterson, A. T., Stein, L. Y., and Klotz, M. G. (2011). Model of the molecular basis for hydroxylamine oxidation and nitrous oxide production in methanotrophic bacteria. FEMS Microbiol. Lett. 322, 82-89.
-
(2011)
FEMS Microbiol. Lett.
, vol.322
, pp. 82-89
-
-
Campbell, M.A.1
Nyerges, G.2
Kozlowski, J.A.3
Poret-Peterson, A.T.4
Stein, L.Y.5
Klotz, M.G.6
-
27
-
-
33846987885
-
Molecular diversity of nitrite reductase genes (nirK) in nitrifying bacteria
-
Cantera, J. J. L., and Stein, L. Y. (2007a). Molecular diversity of nitrite reductase genes (nirK) in nitrifying bacteria. Environ. Microbiol. 9, 765-776.
-
(2007)
Environ. Microbiol.
, vol.9
, pp. 765-776
-
-
Cantera, J.J.L.1
Stein, L.Y.2
-
28
-
-
34548665995
-
Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea
-
Cantera, J. J. L., and Stein, L. Y. (2007b). Role of nitrite reductase in the ammonia-oxidizing pathway of Nitrosomonas europaea. Arch. Microbiol 188, 349-354.
-
(2007)
Arch. Microbiol
, vol.188
, pp. 349-354
-
-
Cantera, J.J.L.1
Stein, L.Y.2
-
29
-
-
0035350952
-
Dissimilatory nitrite reductase genes from autotrophic ammonia-oxidizing bacteria
-
Casciotti, K. L, and Ward, B. B. (2001). Dissimilatory nitrite reductase genes from autotrophic ammonia-oxidizing bacteria. Appl. Environ. Microbiol 67,2213-2221.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 2213-2221
-
-
Casciotti, K.L.1
Ward, B.B.2
-
30
-
-
15244339396
-
Phylogenetic analysis of nitric oxide reductase gene homologues from aerobic ammonia oxidizing bacteria
-
Casciotti, K. L, and Ward, B. B. (2005). Phylogenetic analysis of nitric oxide reductase gene homologues from aerobic ammonia oxidizing bacteria. FEMS Microbiol Ecol 52, 197-205.
-
(2005)
FEMS Microbiol Ecol
, vol.52
, pp. 197-205
-
-
Casciotti, K.L.1
Ward, B.B.2
-
31
-
-
0034128057
-
Analysis of genes encoding an alternative nitrogenase in the archaeon Methanosarcina barkeri 221'
-
Chien, Y. T., Auerbuch, V., Brabban, A. D., and Zinder, S. H. (2000). Analysis of genes encoding an alternative nitrogenase in the archaeon Methanosarcina barkeri 221'. J. Bacteriol 182, 3247-3253.
-
(2000)
J. Bacteriol
, vol.182
, pp. 3247-3253
-
-
Chien, Y.T.1
Auerbuch, V.2
Brabban, A.D.3
Zinder, S.H.4
-
32
-
-
79955069864
-
Modularity of methylotrophy, revisited
-
Chistoserdova, L. (2011). Modularity of methylotrophy, revisited. Environ. Microbiol 13,2603-2622.
-
(2011)
Environ. Microbiol
, vol.13
, pp. 2603-2622
-
-
Chistoserdova, L.1
-
33
-
-
14844340576
-
A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea
-
Chistoserdova, L., Vorholt, J. A., and Lidstrom, M. E. (2005). A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea. Genome Biol. 6, 208-213.
-
(2005)
Genome Biol
, vol.6
, pp. 208-213
-
-
Chistoserdova, L.1
Vorholt, J.A.2
Lidstrom, M.E.3
-
34
-
-
32244436303
-
Spectral, kinetic, and thermodynamic properties of Cu(I) and Cu(II) binding by methanobactin from Methylosinus trichosporiutn OB3b
-
Choi, D. W, Corbin, J., Do, Y. S., Semrau, J. D., Antholine, W E., Hargrove, M. S., Pohl, N. L., Boyd, E. S., Geesey, G., Hartsel, S. C, Shafe, P. H., McEllistrem, M. T., Kisting, C. J., Campbell, D., Rao, V., de la Mora, A. M., and Dispirito, A. A. (2006). Spectral, kinetic, and thermodynamic properties of Cu(I) and Cu(II) binding by methanobactin from Methylosinus trichosporiutn OB3b. Biochemistry 45, 1442-1453.
-
(2006)
Biochemistry
, vol.45
, pp. 1442-1453
-
-
Choi, D.W.1
Corbin, J.2
Do, Y.S.3
Semrau, J.D.4
Antholine, W.E.5
Hargrove, M.S.6
Pohl, N.L.7
Boyd, E.S.8
Geesey, G.9
Hartsel, S.C.10
Shafe, P.H.11
Mcellistrem, M.T.12
Kisting, C.J.13
Campbell, D.14
Rao, V.15
de la Mora, A.M.16
Dispirito, A.A.17
-
35
-
-
0141838951
-
The membrane-associated methane monooxygenase (pMMO) and pMMO-NADH: quinone oxidoreductase complex from Methylococcus capsulatus Bath
-
Choi, D.-W., Kunz, R. C, Boyd, E. S., Semrau, J. D., Antholine, W E., Han, J.-I., Zahn, J. A., Boyd, J. M., De La Mora, A. M., and DiSpirito, A. A. (2003). The membrane-associated methane monooxygenase (pMMO) and pMMO-NADH: quinone oxidoreductase complex from Methylococcus capsulatus Bath. J Bacterial 185, 5755-5764.
-
(2003)
J Bacterial
, vol.185
, pp. 5755-5764
-
-
Choi, D.-W.1
Kunz, R.C.2
Boyd, E.S.3
Semrau, J.D.4
Antholine, W.E.5
Han, J.-I.6
Zahn, J.A.7
Boyd, J.M.8
De La Mora, A.M.9
Dispirito, A.A.10
-
36
-
-
0000506468
-
Molybdenum in the northeast Pacific Ocean
-
Collier, R. W (1985). Molybdenum in the northeast Pacific Ocean. Limnol Oceanogr. 30, 1351-1354.
-
(1985)
Limnol Oceanogr
, vol.30
, pp. 1351-1354
-
-
Collier, R.W.1
-
37
-
-
0029845048
-
Soil microorganisms as controllers of atmospheric trace gases (H2, CO, CH4, OCS, N2O, and NO)
-
Conrad, R. (1996). Soil microorganisms as controllers of atmospheric trace gases (H2, CO, CH4, OCS, N2O, and NO). Microbiol Mol Biol Rev. 60, 609-640.
-
(1996)
Microbiol Mol Biol Rev
, vol.60
, pp. 609-640
-
-
Conrad, R.1
-
38
-
-
77955516282
-
Microbial metalloproteomes are largely uncharacterized
-
Cvetkovic, A., Menon,A. L., Thorgersen, M. P., Scott, J. W, Poole Ii, F. L., Jenney, F. E. Jr., Lancaster, W. A., Praissman, J. L., Shanmukh, S., Vaccaro, B. J., Trauger, S. A., Kalisiak, E., Apon, J. V., Siuzdak, G., Yannone, S. M., Tainer, J. A., and Adams, M. W W. (2010). Microbial metalloproteomes are largely uncharacterized. Nature 466,779-782.
-
(2010)
Nature
, vol.466
, pp. 779-782
-
-
Cvetkovic, A.1
Menon, A.L.2
Thorgersen, M.P.3
Scott, J.W.4
Poole Ii, F.L.5
Jenney Jr., F.E.6
Lancaster, W.A.7
Praissman, J.L.8
Shanmukh, S.9
Vaccaro, B.J.10
Trauger, S.A.11
Kalisiak, E.12
Apon, J.V.13
Siuzdak, G.14
Yannone, S.M.15
Tainer, J.A.16
Adams, M.W.W.17
-
39
-
-
0027944948
-
Characterization and determination of the redox properties of the 2[4Fe-4S] ferredoxin from Methanosarcina barkeri strain MS
-
Daas, P. J. H., Hagen, W R., Keltjens, J. T., and Vogels, G. D. (1994). Characterization and determination of the redox properties of the 2[4Fe-4S] ferredoxin from Methanosarcina barkeri strain MS. FEBS Lett. 356, 342-344.
-
(1994)
FEBS Lett
, vol.356
, pp. 342-344
-
-
Daas, P.J.H.1
Hagen, W.R.2
Keltjens, J.T.3
Vogels, G.D.4
-
40
-
-
78650987950
-
Rapid evolutionary innovation during an Archaean genetic expansion
-
David.L.A.,and Alm.E.J. (2010).Rapid evolutionary innovation during an Archaean genetic expansion. Nature 469, 93-96.
-
(2010)
Nature
, vol.469
, pp. 93-96
-
-
David, L.A.1
Alm, E.J.2
-
41
-
-
70350134633
-
Deep-sea archaea fix and share nitrogen in methane-consuming microbial consortia
-
Dekas, A., Poretsky, R. S., and Orphan, V. J. (2009). Deep-sea archaea fix and share nitrogen in methane-consuming microbial consortia. Science 326, 422-426.
-
(2009)
Science
, vol.326
, pp. 422-426
-
-
Dekas, A.1
Poretsky, R.S.2
Orphan, V.J.3
-
42
-
-
79451471501
-
Trace element requirements of agricultural biogas digesters during biological conversion of renewable biomass to methane
-
Demirel, B., and Scherer, P. (2011). Trace element requirements of agricultural biogas digesters during biological conversion of renewable biomass to methane. Biomass Bioenergy 35, 992-998.
-
(2011)
Biomass Bioenergy
, vol.35
, pp. 992-998
-
-
Demirel, B.1
Scherer, P.2
-
43
-
-
0026611196
-
Purification and properties of a F420 -nonreactive, membrane-bound hydrogenase from Methanosarcina strain Gol
-
Deppenmeier, U., Blaut, M., Schmidt, B., and Gottschalk, G. (1992). Purification and properties of a F420 -nonreactive, membrane-bound hydrogenase from Methanosarcina strain Gol. Arch. Microbiol 157, 505-511.
-
(1992)
Arch. Microbiol
, vol.157
, pp. 505-511
-
-
Deppenmeier, U.1
Blaut, M.2
Schmidt, B.3
Gottschalk, G.4
-
44
-
-
0019813985
-
Nickel requirement and factor F430 content of methanogenic bacteria
-
Diekert, G., Konheiser, U., Piechulla, K., and Thauer, R. K. (1981). Nickel requirement and factor F430 content of methanogenic bacteria. J Bacterial 148, 459-464.
-
(1981)
J Bacterial
, vol.148
, pp. 459-464
-
-
Diekert, G.1
Konheiser, U.2
Piechulla, K.3
Thauer, R.K.4
-
45
-
-
0019162521
-
Nickel dependence of factor F430 content in Methanobacterium thermoautotrophicum
-
Diekert, G., Weber, B., and Thauer, R. K. (1980). Nickel dependence of factor F430 content in Methanobacterium thermoautotrophicum. Arch. Microbiol 127, 273-277.
-
(1980)
Arch. Microbiol
, vol.127
, pp. 273-277
-
-
Diekert, G.1
Weber, B.2
Thauer, R.K.3
-
46
-
-
0032448262
-
Copper-binding compounds from Methylosinus trichosporium OB3b
-
DiSpirito, A. A., Zahn, J. A., Graham, D. W., Kim, H. J., Larive, C. K., Derrick, T. S., Cox, C. D., and Taylor, A. (1998). Copper-binding compounds from Methylosinus trichosporium OB3b. J Bacteriol. 180, 3606-3613.
-
(1998)
J Bacteriol
, vol.180
, pp. 3606-3613
-
-
Dispirito, A.A.1
Zahn, J.A.2
Graham, D.W.3
Kim, H.J.4
Larive, C.K.5
Derrick, T.S.6
Cox, C.D.7
Taylor, A.8
-
47
-
-
77953778296
-
History of biological metal utilization inferred through phylogenomic analysis of protein structures
-
Dupont, C. L., Butcher, A., Ruben, R. E., Bourne, P. E., and Caetano-Anolles, G. (2010). History of biological metal utilization inferred through phylogenomic analysis of protein structures. Proc. Natl Acad. Sci. U.S.A. 107, 10567-10572.
-
(2010)
Proc. Natl Acad. Sci. U.S.A.
, vol.107
, pp. 10567-10572
-
-
Dupont, C.L.1
Butcher, A.2
Ruben, R.E.3
Bourne, P.E.4
Caetano-Anolles, G.5
-
48
-
-
33845230241
-
Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry
-
Dupont, C. L., Yang, S., Palenik, B., and Bourne, P. E. (2006). Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry. Proc. Natl Acad. Sci. U.S.A 103, 17822.
-
(2006)
Proc. Natl Acad. Sci. U.S.A.
, vol.103
, pp. 17822
-
-
Dupont, C.L.1
Yang, S.2
Palenik, B.3
Bourne, P.E.4
-
49
-
-
0026291842
-
Ocean anoxia and the concentrations of molybdenum and vanadium in seawater
-
Emerson, S. R., and Huested, S. S. (1991). Ocean anoxia and the concentrations of molybdenum and vanadium in seawater. Mar. Chem. 34, 177-196
-
(1991)
Mar. Chem.
, vol.34
, pp. 177-196
-
-
Emerson, S.R.1
Huested, S.S.2
-
50
-
-
0027534951
-
In vitro activation of ammonia monooxygenase from Nitrosomonas europaea by copper
-
Ensign, S. A., Hyman, M. R., and Arp, D. J. (1993). In vitro activation of ammonia monooxygenase from Nitrosomonas europaea by copper. J Bacteriol 175, 1971-1980.
-
(1993)
J Bacteriol
, vol.175
, pp. 1971-1980
-
-
Ensign, S.A.1
Hyman, M.R.2
Arp, D.J.3
-
51
-
-
0030726657
-
Crystal structure of methylcoenzyme M reductase: the key enzyme of biological methane formation
-
Ermler, U., Grabarse, W., Shima, S., Goubeaud, M., and Thauer, R. K. (1997). Crystal structure of methylcoenzyme M reductase: the key enzyme of biological methane formation. Science 278, 1457-1462.
-
(1997)
Science
, vol.278
, pp. 1457-1462
-
-
Ermler, U.1
Grabarse, W.2
Shima, S.3
Goubeaud, M.4
Thauer, R.K.5
-
52
-
-
77950258771
-
Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
-
Ettwig, K. E, Butler, M. K., Le Paslier, D., Pelletier, E., Mangenot, S., Kuypers, M. M. M., Schreiber, E, Dutilh, B. E., Zedelius, J., De Beer, D., Gloerich, J., Wessels, H. J., van Alen, T., Luesken, E, Wu, M. L., van de Pas-Schoonen, K. T., Op Den Camp, H. J., Janssen-Megens, E. M., Francoijs, K. J., Stunnenberg, H., Weissenbach, J., Jetten, M. S.,andStrousM. (2010). Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature 464, 543-548.
-
(2010)
Nature
, vol.464
, pp. 543-548
-
-
Ettwig, K.E.1
Butler, M.K.2
Le Paslier, D.3
Pelletier, E.4
Mangenot, S.5
Kuypers, M.M.M.6
Schreiber, E.7
Dutilh, B.E.8
Zedelius, J.9
De Beer, D.10
Gloerich, J.11
Wessels, H.J.12
van Alen, T.13
Luesken, E.14
Wu, M.L.15
Van De Pas-Schoonen, K.T.16
Op Den Camp, H.J.17
Janssen-Megens, E.M.18
Francoijs, K.J.19
Stunnenberg, H.20
Weissenbach, J.21
Jetten, M.S.22
Strous, M.23
more..
-
53
-
-
0009573057
-
Factors affecting the methanogenic activity of Methanothrix soehngenii VNBF
-
Fathepure, B. Z. (1987). Factors affecting the methanogenic activity of Methanothrix soehngenii VNBF. Appl Environ. Microbiol 53, 2978-2982.
-
(1987)
Appl Environ. Microbiol
, vol.53
, pp. 2978-2982
-
-
Fathepure, B.Z.1
-
54
-
-
0033005876
-
Enzymology of one carbon metabolism in methanogenic pathways
-
Ferry, J. G. (1999). Enzymology of one carbon metabolism in methanogenic pathways. FEMS Microbiol Rev. 23, 13-38.
-
(1999)
FEMS Microbiol Rev
, vol.23
, pp. 13-38
-
-
Ferry, J.G.1
-
55
-
-
78449285923
-
The chemical biology of methanogenesis
-
Ferry, J. G. (2010a). The chemical biology of methanogenesis. Planet. Space Sci. 58, 1775-1783.
-
(2010)
Planet. Space Sci.
, vol.58
, pp. 1775-1783
-
-
Ferry, J.G.1
-
56
-
-
77957951370
-
How to make a living by exhaling methane
-
Ferry, J. G. (2010b). How to make a living by exhaling methane. Annu. Rev. Microbiol 64, 453-473.
-
(2010)
Annu. Rev. Microbiol
, vol.64
, pp. 453-473
-
-
Ferry, J.G.1
-
57
-
-
0027954182
-
Importance of cobalt for individual trophic groups in an anaerobic methanol-degrading consortium
-
Florencio, L., Field, J. A., and Lettinga, G. (1994). Importance of cobalt for individual trophic groups in an anaerobic methanol-degrading consortium. Appl Environ. Microbiol 60,227-234.
-
(1994)
Appl Environ. Microbiol
, vol.60
, pp. 227-234
-
-
Florencio, L.1
Field, J.A.2
Lettinga, G.3
-
58
-
-
0027192335
-
Effect of cobalt on the anaerobic degradation of methanol
-
Florencio, L., Jenicek, P., Field, J. A., and Lettinga, G. (1993). Effect of cobalt on the anaerobic degradation of methanol. J Ferment. Bioeng. 75, 368-374.
-
(1993)
J Ferment. Bioeng.
, vol.75
, pp. 368-374
-
-
Florencio, L.1
Jenicek, P.2
Field, J.A.3
Lettinga, G.4
-
59
-
-
0023653187
-
8-Hydroxy-5-deazaflavin-reducing hydrogenase from Methanobacterium thermoautotrophicum: 1
-
Fox, J. A., Livingston, D. J., Orme-Johnson, W. H., and Walsh, C. T. (1987). 8-Hydroxy-5-deazaflavin-reducing hydrogenase from Methanobacterium thermoautotrophicum: 1. Purification and characterization. Biochemistry 26, 4219-4227.
-
(1987)
Purification and characterization. Biochemistry
, vol.26
, pp. 4219-4227
-
-
Fox, J.A.1
Livingston, D.J.2
Orme-Johnson, W.H.3
Walsh, C.T.4
-
60
-
-
80051820682
-
Copper biogeochemistry: a cornerstone in aerobic methanotrophic bacterial ecology and activity
-
Fru, E. C. (2011). Copper biogeochemistry: a cornerstone in aerobic methanotrophic bacterial ecology and activityGeomicrobiol J. 28, 601-614.
-
(2011)
Geomicrobiol J
, vol.28
, pp. 601-614
-
-
Fru, E.C.1
-
61
-
-
0029054793
-
The anatomy of a bifunctional enzyme: structural basis for reduction of oxygen to water and synthesis of nitric oxide by cytochrome cd
-
Fiilop, V., Moir, J. W B., Ferguson, S. J., and Hajdu, J. (1995). The anatomy of a bifunctional enzyme: structural basis for reduction of oxygen to water and synthesis of nitric oxide by cytochrome cd\. Cell 81, 369-377.
-
(1995)
J Cell
, vol.81
, pp. 369-377
-
-
Fiilop, V.1
Moir, J.W.B.2
Ferguson, S.J.3
Hajdu, J.4
-
62
-
-
0346499303
-
Chemically distinct Ni sites in the A-cluster in subunit of the acetyl-CoA decarbonylase/synthase complex from Methanosarcina thermophila: Ni L-edge absorption and X-ray magnetic circular dichroism analyses
-
Funk, T., Gu, W, Friedrich, S., Wang, H., Gencic, S., Grahame, D. A., and Cramer, S. P. (2004). Chemically distinct Ni sites in the A-cluster in subunit of the acetyl-CoA decarbonylase/synthase complex from Methanosarcina thermophila: Ni L-edge absorption and X-ray magnetic circular dichroism analyses. J Am. Chem. Soc. 126, 88-95.
-
(2004)
J Am. Chem. Soc.
, vol.126
, pp. 88-95
-
-
Funk, T.1
Gu, W.2
Friedrich, S.3
Wang, H.4
Gencic, S.5
Grahame, D.A.6
Cramer, S.P.7
-
63
-
-
0038532257
-
Regulation of the nitric oxide reduction operon (norRVW) in Escherichia coli
-
Gardner, A. M., Gessner, C. R., and Gardner, P. R. (2003). Regulation of the nitric oxide reduction operon (norRVW) in Escherichia coli. J. Biol Chem. 278,10081-10086.
-
(2003)
J. Biol Chem.
, vol.278
, pp. 10081-10086
-
-
Gardner, A.M.1
Gessner, C.R.2
Gardner, P.R.3
-
64
-
-
0027339844
-
Purification and properties of N5 methyltetrahydromethanopterin: coenzyme M methyltransferase from Methanobacterium thermoautotrophicum
-
Gartner, P., Ecker, A., Fischer, R., Linder, D., Fuchs, G., and Thauer, R. K. (1993). Purification and properties of N5 methyltetrahydromethanopterin: coenzyme M methyltransferase from Methanobacterium thermoautotrophicum. Eur. J Biochem. 213, 537-545.
-
(1993)
Eur. J Biochem.
, vol.213
, pp. 537-545
-
-
Gartner, P.1
Ecker, A.2
Fischer, R.3
Linder, D.4
Fuchs, G.5
Thauer, R.K.6
-
65
-
-
0026353602
-
The 2 3 angstrom X-ray structure of nitrite reductase from Achromobacter cyclo-clastes
-
Godden, J. W, Turley, S., Teller, D. C, Adman, E. T., Liu, M. Y, Payne, W. J., and Legall, J. (1991). The 2.3 angstrom X-ray structure of nitrite reductase from Achromobacter cyclo-clastes. Science 253, 438-442.
-
(1991)
Science
, vol.253
, pp. 438-442
-
-
Godden, J.W.1
Turley, S.2
Teller, D.C.3
Adman, E.T.4
Liu, M.Y.5
Payne, W.J.6
Legall, J.7
-
66
-
-
47749139329
-
Structure of the 2 2 Ni-dependent CO dehydrogenase component of the Methanosarcina barkeri acetyl-CoA decarbonylase/synthase complex
-
Gong, W., Hao, B., Wei, Z., Ferguson, D. J., Tallant, T., Krzycki, J. A., and Chan, M. K. (2008). Structure of the 2 2 Ni-dependent CO dehydrogenase component of the Methanosarcina barkeri acetyl-CoA decarbonylase/synthase complex. Proc. Natl Acad. Sci. U.S.A. 105, 9558-9563.
-
(2008)
Proc. Natl Acad. Sci. U.S.A.
, vol.105
, pp. 9558-9563
-
-
Gong, W.1
Hao, B.2
Wei, Z.3
Ferguson, D.J.4
Tallant, T.5
Krzycki, J.A.6
Chan, M.K.7
-
67
-
-
0032964739
-
Effects of nickel and cobalt on kinetics of methanol conversion by methanogenic sludge as assessed by online CH4 monitoring
-
Gonzalez-Gil, G., Kleerebezem, R., and Lettinga, G. (1999). Effects of nickel and cobalt on kinetics of methanol conversion by methanogenic sludge as assessed by online CH4 monitoring. Appl. Environ. Microbiol. 65, 1789-1793.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 1789-1793
-
-
Gonzalez-Gil, G.1
Kleerebezem, R.2
Lettinga, G.3
-
68
-
-
0037250038
-
Accumulation of nitrogen oxides in copper-limited cultures of denitrifying bacteria
-
Granger, J., and Ward, B. B. (2003). Accumulation of nitrogen oxides in copper-limited cultures of denitrifying bacteria. Limnol. Oceanogr. 48, 313-318.
-
(2003)
Limnol. Oceanogr
, vol.48
, pp. 313-318
-
-
Granger, J.1
Ward, B.B.2
-
69
-
-
33846809521
-
Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex
-
Hagemeier, C. H., Kruer, M., Thauer, R. K., Warkentin, E., and Ermler, U. (2006). Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex. Proc. Natl Acad. Sci. U.S.A. 103, 18917-18922.
-
(2006)
Proc. Natl Acad. Sci. U.S.A.
, vol.103
, pp. 18917-18922
-
-
Hagemeier, C.H.1
Kruer, M.2
Thauer, R.K.3
Warkentin, E.4
Ermler, U.5
-
70
-
-
46049113886
-
The metal centers of particulate methane monooxygenase from Methylosinus trichosporium OB3b
-
Hakemian, A. S., Kondapalli, K. C, Telser, J., Hoffman, B. M., Stemmler, T. L., and Rosenzweig, A. C. (2008). The metal centers of particulate methane monooxygenase from Methylosinus trichosporium OB3b. Biochemistry 47, 6793-6801.
-
(2008)
Biochemistry
, vol.47
, pp. 6793-6801
-
-
Hakemian, A.S.1
Kondapalli, K.C.2
Telser, J.3
Hoffman, B.M.4
Stemmler, T.L.5
Rosenzweig, A.C.6
-
72
-
-
0141592799
-
Identification of methyl coenzyme M reductase A (mcrA) genes associated with methane-oxidizing archaea
-
Hallam, S. J., Girguis, P. R., Preston, C. M., Richardson, P. M., and Delong, E. E (2003). Identification of methyl coenzyme M reductase A (mcrA) genes associated with methane-oxidizing archaea. Appl. Environ. Mkrobiol. 69, 5483-5491.
-
(2003)
Appl. Environ. Mkrobiol.
, vol.69
, pp. 5483-5491
-
-
Hallam, S.J.1
Girguis, P.R.2
Preston, C.M.3
Richardson, P.M.4
Delong, E.E.5
-
73
-
-
33646260901
-
Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota
-
doi:10.1371/journal.pbio.0040095
-
Hallam, S. J., Mincer, T. J., Schleper, C, Preston, C. M., Roberts, K., Richardson, P. M., and DeLong, E. F. (2006). Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota. PLoS Biol. 4, e95. doi:10.1371/journal.pbio.0040095
-
(2006)
PLoS Biol
, vol.4
-
-
Hallam, S.J.1
Mincer, T.J.2
Schleper, C.3
Preston, C.M.4
Roberts, K.5
Richardson, P.M.6
Delong, E.F.7
-
74
-
-
4444370893
-
Reverse methanogenesis: testing the hypothesis with environmental genomics
-
Hallam, S. J., Putman, N., Preston, C. M., Detter, J. C, Rokhsar, D., Richardson, P. M., and DeLong, E. F. (2004). Reverse methanogenesis: testing the hypothesis with environmental genomics. Science 305, 1457-1462.
-
(2004)
Science
, vol.305
, pp. 1457-1462
-
-
Hallam, S.J.1
Putman, N.2
Preston, C.M.3
Detter, J.C.4
Rokhsar, D.5
Richardson, P.M.6
Delong, E.F.7
-
75
-
-
35848942614
-
A cysteine-rich CCG domain contains a novel [4Fe-4S] cluster binding motif as deduced from studies with subunit B of heterodisulfide reductase from Methanothermobacter marburgensis
-
Hamann, N., Mander, G. J., Shokes, J. E., Scott, R. A., Bennati, M., and Hedderich, R. (2007). A cysteine-rich CCG domain contains a novel [4Fe-4S] cluster binding motif as deduced from studies with subunit B of heterodisulfide reductase from Methanothermobacter marburgensis. Biochemistry 46, 12875-12885.
-
(2007)
Biochemistry
, vol.46
, pp. 12875-12885
-
-
Hamann, N.1
Mander, G.J.2
Shokes, J.E.3
Scott, R.A.4
Bennati, M.5
Hedderich, R.6
-
77
-
-
0023790628
-
Trace metals in the water columns of the Black Sea and Framvaren Fjord
-
Haraldsson, C, and Westerlund, S. (1988). Trace metals in the water columns of the Black Sea and Framvaren Fjord. Mar. Chem. 23, 417-424.
-
(1988)
Mar. Chem.
, vol.23
, pp. 417-424
-
-
Haraldsson, C.1
Westerlund, S.2
-
78
-
-
27644456292
-
Heterodisulfide reductase from methanogenic archaea: a new catalytic role for an iron-sulfur cluster
-
Hedderich, R., Hamann, N., and Bennati, M. (2005). Heterodisulfide reductase from methanogenic archaea: a new catalytic role for an iron-sulfur cluster. Biol. Chem. 386, 961-970.
-
(2005)
Biol. Chem.
, vol.386
, pp. 961-970
-
-
Hedderich, R.1
Hamann, N.2
Bennati, M.3
-
79
-
-
0028351576
-
Purification of a two subunit cytochrome b containing heterodisulfide reductase from methanol grown Methanosarcina barkeri
-
Heiden, S., Hedderich, R., Setzke, E., and Thauer, R. K. (1994). Purification of a two subunit cytochrome b containing heterodisulfide reductase from methanol grown Methanosarcina barkeri. Eur. J. Biochem. 221, 855-861.
-
(1994)
Eur. J. Biochem.
, vol.221
, pp. 855-861
-
-
Heiden, S.1
Hedderich, R.2
Setzke, E.3
Thauer, R.K.4
-
80
-
-
80051699847
-
Atmospheric science: enigma of the recent methane budget
-
Heimann, M. (2011). Atmospheric science: enigma of the recent methane budget. Nature 476,157-158.
-
(2011)
Nature
, vol.476
, pp. 157-158
-
-
Heimann, M.1
-
81
-
-
46249128311
-
Immunological localization of coenzyme M reductase in anaerobic methane-oxidizing archaea of ANME 1 and ANME 2 type
-
Heller, C, Hoppert, M., and Reitner, J. (2008). Immunological localization of coenzyme M reductase in anaerobic methane-oxidizing archaea of ANME 1 and ANME 2 type. Geomicrobiol. J 25, 149-156.
-
(2008)
Geomicrobiol. J
, vol.25
, pp. 149-156
-
-
Heller, C.1
Hoppert, M.2
Reitner, J.3
-
82
-
-
0034663614
-
Nitric oxide reductases in bacteria
-
Hendriks, J., Oubrie, A., Castresana, J., Urbani, A., Gemeinhardt, S., and Saraste, M. (2000). Nitric oxide reductases in bacteria. Biochim. Biophys. Acta 1459, 266-273.
-
(2000)
Biochim. Biophys. Acta
, vol.1459
, pp. 266-273
-
-
Hendriks, J.1
Oubrie, A.2
Castresana, J.3
Urbani, A.4
Gemeinhardt, S.5
Saraste, M.6
-
83
-
-
0033614388
-
Methane-consuming archaebacteria in marine sediments
-
Hinrichs, K.-U., Hayes, J. M., Sylva, S. P., Brewer, P. G., and DeLong, E. F. (1999). Methane-consuming archaebacteria in marine sediments. Nature 398, 802-805.
-
(1999)
Nature
, vol.398
, pp. 802-805
-
-
Hinrichs, K.-U.1
Hayes, J.M.2
Sylva, S.P.3
Brewer, P.G.4
Delong, E.F.5
-
84
-
-
0348252101
-
The elemental composition of some marine phytoplankton
-
Ho, T. Y., Quigg, A., Finkel, Z. V., Milligan, A. J., Wyman, K., Falkowski, P. G., and Morel, F. M. M. (2003). The elemental composition of some marine phytoplankton. J Phycol. 39, 1145-1159.
-
(2003)
J Phycol
, vol.39
, pp. 1145-1159
-
-
Ho, T.Y.1
Quigg, A.2
Finkel, Z.V.3
Milligan, A.J.4
Wyman, K.5
Falkowski, P.G.6
Morel, F.M.M.7
-
85
-
-
0018410591
-
Effect of iron on conversion of acetic acid to methane during methanogenic fermentations
-
Hoban, D., and Van Den Berg, L. (1979). Effect of iron on conversion of acetic acid to methane during methanogenic fermentations. J Appl Microbiol 47, 153-159.
-
(1979)
J Appl Microbiol
, vol.47
, pp. 153-159
-
-
Hoban, D.1
Van Den Berg, L.2
-
86
-
-
0028791540
-
Evidence that participate methane monooxygenase and ammonia monooxygenase may be evolutionarily related
-
Holmes, A. J., Costello, A., Lidstrom, M. E., and Murrell, J. C. (1995). Evidence that participate methane monooxygenase and ammonia monooxygenase may be evolutionarily related. FEMS Microbiol Lett. 132,203-208.
-
(1995)
FEMS Microbiol Lett
, vol.132
, pp. 203-208
-
-
Holmes, A.J.1
Costello, A.2
Lidstrom, M.E.3
Murrell, J.C.4
-
87
-
-
0030611275
-
The 2.8 A structure of hydroxylamine oxidoreductase from a nitrifying chemoautotrophic bacterium Nitrosomonas europaea
-
Igarashi, N., Moriyama, H., Fujiwara, T., Fukumori, Y., and Tanaka, N. (1997). The 2.8 A structure of hydroxylamine oxidoreductase from a nitrifying chemoautotrophic bacterium, Nitrosomonas europaea. Nat. Struc. Biol 4,276-284.
-
(1997)
Nat. Struc. Biol
, vol.4
, pp. 276-284
-
-
Igarashi, N.1
Moriyama, H.2
Fujiwara, T.3
Fukumori, Y.4
Tanaka, N.5
-
89
-
-
0019993818
-
N2 and N2O produced during growth of denitrifying bacteria in copper-depleted and -supplemented media
-
Iwasaki, H., and Terai, H. (1982). N2 and N2O produced during growth of denitrifying bacteria in copper-depleted and -supplemented media. J Gen. Appl. Microbiol. 28, 189-193.
-
(1982)
J Gen. Appl. Microbiol
, vol.28
, pp. 189-193
-
-
Iwasaki, H.1
Terai, H.2
-
90
-
-
66649109787
-
Impact of elevated copper on the rate and gaseous products of denitrification in freshwater sediments
-
Jacinthe, P. A.,and Tedesco, L. P. (2009). Impact of elevated copper on the rate and gaseous products of denitrification in freshwater sediments. J Environ. Qual 38, 1183-1192.
-
(2009)
J Environ. Qual
, vol.38
, pp. 1183-1192
-
-
Jacinthe, P.A.1
Tedesco, L.P.2
-
91
-
-
33847331082
-
The impact of Co and Ni speciation on methanogenesis in sulfidic media - biouptake versus metal dissolution
-
Jansen, S., Gonzalez-Gil, G., and van Leeuwen.H.P. (2007). The impact of Co and Ni speciation on methanogenesis in sulfidic media - biouptake versus metal dissolution. Enzyme Microb. Technol. 40, 823-830.
-
(2007)
Enzyme Microb. Technol.
, vol.40
, pp. 823-830
-
-
Jansen, S.1
Gonzalez-Gil, G.2
Van Leeuwen, H.P.3
-
92
-
-
29244433054
-
Speciation of Co (II) and Ni (II) in anaerobic bioreactors measured by competitive ligand exchange-adsorptive stripping voltammetry
-
Jansen, S., Steffen, E, Threels, W. E, and van Leeuwen, H. P. (2005). Speciation of Co (II) and Ni (II) in anaerobic bioreactors measured by competitive ligand exchange-adsorptive stripping voltammetry. Environ. Sci. Technol. 39, 9493-9499.
-
(2005)
Environ. Sci. Technol.
, vol.39
, pp. 9493-9499
-
-
Jansen, S.1
Steffen, E.2
Threels, W.E.3
van Leeuwen, H.P.4
-
93
-
-
0020375105
-
Nickel transport in Methanobacterium bryantii
-
Jarrell, K., and Sprott, G. (1982). Nickel transport in Methanobacterium bryantii. J. Bacteriol. 151, 1195-1203.
-
(1982)
J. Bacteriol.
, vol.151
, pp. 1195-1203
-
-
Jarrell, K.1
Sprott, G.2
-
94
-
-
0030845742
-
What controls dissolved iron concentrations in the world oceanMar
-
Johnson, K. S., Gordon, R. M., and Coale, K. H. (1997). What controls dissolved iron concentrations in the world oceanMar. Chem. 57, 137-161.
-
(1997)
Chem
, vol.57
, pp. 137-161
-
-
Johnson, K.S.1
Gordon, R.M.2
Coale, K.H.3
-
95
-
-
0025880944
-
Formate dehydrogenase from Methylosinus trichosporium OB3b Purification and spectroscopic characterization of the cofactors
-
Jollie, D., and Lipscomb, J. D. (1991). Formate dehydrogenase from Methylosinus trichosporium OB3b. Purification and spectroscopic characterization of the cofactors. J Biol. Chem. 266,21853-21863.
-
(1991)
J Biol. Chem.
, vol.266
, pp. 21853-21863
-
-
Jollie, D.1
Lipscomb, J.D.2
-
96
-
-
0017405995
-
Methanococcus vannielii: culture and effects of selenium and tungsten on growth
-
Jones, J., and Stadtman, T. C. (1977). Methanococcus vannielii: culture and effects of selenium and tungsten on growth. J Bacteriol. 130,1404-1406.
-
(1977)
J. Bacteriol.
, vol.130
, pp. 1404-1406
-
-
Jones, J.1
Stadtman, T.C.2
-
97
-
-
1642370336
-
Architecture of NarGH reveals a structural classification of MobisMGD enzymes
-
Jormakka, M., Richardson, D., Byrne, B.,and Iwata,S. (2004). Architecture of NarGH reveals a structural classification of MobisMGD enzymes. Structure 12, 95-104.
-
(2004)
Structure
, vol.12
, pp. 95-104
-
-
Jormakka, M.1
Richardson, D.2
Byrne, B.3
Iwata, S.4
-
98
-
-
83155173396
-
Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I. la from an agricultural soil
-
Jung, M.-Y., Park, S.-J., Min, D., Kim, J.-S., Rijpstra, W. I. C, Sinninghe Damste, J. S., Kim, G.-J., Madsen, E. L, and Rhee, S.-K. (2011). Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I. la from an agricultural soil. Appl. Environ. Microbiol. 77, 8635-8647.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 8635-8647
-
-
Jung, M.-Y.1
Park, S.-J.2
Min, D.3
Kim, J.-S.4
Rijpstra, W.I.C.5
Sinninghe Damste, J.S.6
Kim, G.-J.7
Madsen, E.L.8
Rhee, S.-K.9
-
99
-
-
80052913306
-
Thecopperresponding surfaceome of Methylococccus capsulatus Bath
-
Karlsen, O. A., Larsen, O., and Jensen, H.B. (2011).Thecopperresponding surfaceome of Methylococccus capsulatus Bath. FEMS Microbiol. Lett. 323, 97-104.
-
(2011)
FEMS Microbiol. Lett.
, vol.323
, pp. 97-104
-
-
Karlsen, O.A.1
Larsen, O.2
Jensen, H.B.3
-
100
-
-
0031014709
-
Nitrogenase phylogeny and the molybdenum dependence of nitrogen fixation in Methanococcus maripaludis
-
Kessler, P. S., Mclarnan, J., and Leigh, J. A. (1997). Nitrogenase phylogeny and the molybdenum dependence of nitrogen fixation in Methanococcus maripaludis. J. Bacteriol. 179, 541-543.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 541-543
-
-
Kessler, P.S.1
Mclarnan, J.2
Leigh, J.A.3
-
101
-
-
0034924855
-
Influence of Ni2+ and Co2+ on methanogenic activity and the amounts of coenzymes involved in methanogenesis
-
Kida, K., Shigematsu, T., Kijima, J., Numaguchi, M., Mochinaga, Y, Abe, N., and Morimura, S. (2001). Influence of Ni2+ and Co2+ on methanogenic activity and the amounts of coenzymes involved in methanogenesis. J Biosd. Bioeng. 91, 590-595.
-
(2001)
J. Biosd. Bioeng.
, vol.91
, pp. 590-595
-
-
Kida, K.1
Shigematsu, T.2
Kijima, J.3
Numaguchi, M.4
Mochinaga, Y.5
Abe, N.6
Morimura, S.7
-
102
-
-
4644268662
-
Methanobactin, a copper-acquisition compound from methane-oxidizing bacteria
-
Kim, H. J., Graham, D. W., DiSpirito, A. A., Alterman, M. A., Galeva, N., Larive, C. K., Asunskis, D., and Sherwood, P. M. A. (2004). Methanobactin, a copper-acquisition compound from methane-oxidizing bacteria. Science 305, 1612-1615.
-
(2004)
Science
, vol.305
, pp. 1612-1615
-
-
Kim, H.J.1
Graham, D.W.2
DiSpirito, A.A.3
Alterman, M.A.4
Galeva, N.5
Larive, C.K.6
Asunskis, D.7
Sherwood, P.M.A.8
-
103
-
-
0020767614
-
Extraction and chemical analysis of interstitial water from soils and rocks
-
Kinniburgh, D. G., and Miles, D. L. (1983). Extraction and chemical analysis of interstitial water from soils and rocks. Environ. Sci. Technol. 17, 362-368.
-
(1983)
Environ. Sci. Technol.
, vol.17
, pp. 362-368
-
-
Kinniburgh, D.G.1
Miles, D.L.2
-
104
-
-
34547516631
-
Methane monooxygenase gene expression mediated by methanobactin in the presence of mineral copper sources
-
Knapp, C. W., Fowle, D. A., Kulczycki, E., Roberts, J. A., and Graham, D. W. (2007). Methane monooxygenase gene expression mediated by methanobactin in the presence of mineral copper sources. Proc. Natl. Acad. Sci. U.S.A. 104, 12040-12045.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 12040-12045
-
-
Knapp, C.W.1
Fowle, D.A.2
Kulczycki, E.3
Roberts, J.A.4
Graham, D.W.5
-
105
-
-
70349559191
-
Anaerobic oxidation of methane: progress with an unknown process
-
Knittel, K., and Boetius, A. (2009). Anaerobic oxidation of methane: progress with an unknown process. Annu. Rev. Microbiol. 63, 311-334.
-
(2009)
Annu. Rev. Microbiol.
, vol.63
, pp. 311-334
-
-
Knittel, K.1
Boetius, A.2
-
106
-
-
0020064009
-
Denitrification. Microbiol
-
Knowles, R. (1982). Denitrification. Microbiol. Mol Biol. Rev. 46, 43-70.
-
(1982)
Mol Biol. Rev
, vol.46
, pp. 43-70
-
-
Knowles, R.1
-
107
-
-
0344000130
-
A comparison of the filamentous iron organisms Clonothrix fusca Roze and Crenothrix polyspora Cohn
-
Kolk, L. A. (1938). A comparison of the filamentous iron organisms, Clonothrix fusca Roze and Crenothrix polyspora Cohn. Am. J. Bot. 25, 11-17.
-
(1938)
Am. J. Bot.
, vol.25
, pp. 11-17
-
-
Kolk, L.A.1
-
108
-
-
64749087356
-
Oceanic nickel depletion and a methanogen famine before the Great Oxidation Event
-
Konhauser, K. O., Pecoits, E., Lalonde, S. V., Papineau, D., Nisbet, E. G., Barley, M. E., Arndt, N. T., Zahnle, K., and Kamber, B. S. (2009). Oceanic nickel depletion and a methanogen famine before the Great Oxidation Event. Nature 458, 750-753.
-
(2009)
Nature
, vol.458
, pp. 750-753
-
-
Konhauser, K.O.1
Pecoits, E.2
Lalonde, S.V.3
Papineau, D.4
Nisbet, E.G.5
Barley, M.E.6
Arndt, N.T.7
Zahnle, K.8
Kamber, B.S.9
-
109
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Konneke, M., Bernhard, A. E., De La Torre, J. R., Walker, C. B., Waterbury, J. B., and Stahl, D. A. (2005). Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437, 543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Konneke, M.1
Bernhard, A.E.2
De La Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
110
-
-
0020972503
-
The behavior of Zn, Cd, Cu, Ni, Co, Fe, and Mn in anoxic Baltic waters
-
Kremling, K. (1983). The behavior of Zn, Cd, Cu, Ni, Co, Fe, and Mn in anoxic Baltic waters. Mar. Chem. 13, 87-108.
-
(1983)
Mar. Chem.
, vol.13
, pp. 87-108
-
-
Kremling, K.1
-
111
-
-
9144257242
-
A conspicuous nickel protein in microbial mats that oxidize methane anaerobically
-
Kriiger, M., Meyerdierks, A., Glockner, F. O., Amann, R., Widdel, E, Kube, M., Reinhardt, R., Kahnt, R., Bocher, R., Thauer, R. K., and Shima, S. (2003). A conspicuous nickel protein in microbial mats that oxidize methane anaerobically. Nature 426, 878-881.
-
(2003)
Nature
, vol.426
, pp. 878-881
-
-
Kriiger, M.1
Meyerdierks, A.2
Glockner, F.O.3
Amann, R.4
Widdel, E.5
Kube, M.6
Reinhardt, R.7
Kahnt, R.8
Bocher, R.9
Thauer, R.K.10
Shima, S.11
-
112
-
-
0018849632
-
Quantification of corrinoids in methanogenic bacteria
-
Krzycki, J., and Zeikus, J. (1980). Quantification of corrinoids in methanogenic bacteria. Curr. Microbiol. 3, 243-245.
-
(1980)
Curr. Microbiol.
, vol.3
, pp. 243-245
-
-
Krzycki, J.1
Zeikus, J.2
-
113
-
-
78651093856
-
Stimulation of methanotroph activity by Cu-substituted borosilicate glass
-
Kulczycki, E., Fowle, D. A., Kenward, P. A., Leslie, K., Graham, D. W, and Roberts, J. A. (2011). Stimulation of methanotroph activity by Cu-substituted borosilicate glass. Geomicrobiol. J 28, 1-10.
-
(2011)
Geomicrobiol. J
, vol.28
, pp. 1-10
-
-
Kulczycki, E.1
Fowle, D.A.2
Kenward, P.A.3
Leslie, K.4
Graham, D.W.5
Roberts, J.A.6
-
114
-
-
34548166548
-
Methanobactin-promoted dissolution of Cu-substituted borosilicate glass
-
Kulczycki, E., Fowle, D. A., Knapp, C, Graham, D. W, and Roberts, J. A. (2007). Methanobactin-promoted dissolution of Cu-substituted borosilicate glass. Geobiology 5, 251-263.
-
(2007)
Geobiology
, vol.5
, pp. 251-263
-
-
Kulczycki, E.1
Fowle, D.A.2
Knapp, C.3
Graham, D.W.4
Roberts, J.A.5
-
115
-
-
0031055712
-
Heterodisulfide reductase from methanol grown cells of Methanosarcina barkeri is not a flavoenzyme
-
Kiinkel, A., Vaupel, M., Heim, S., Thauer, R. K., and Hedderich, R. (1997). Heterodisulfide reductase from methanol grown cells of Methanosarcina barkeri is not a flavoenzyme. Eur. J. Biochem. 244, 226-234.
-
(1997)
Eur. J. Biochem.
, vol.244
, pp. 226-234
-
-
Kiinkel, A.1
Vaupel, M.2
Heim, S.3
Thauer, R.K.4
Hedderich, R.5
-
116
-
-
0037240872
-
The tungsten-containing formate dehydrogenase from Methylobacterium extorquens AMI: purification and properties
-
Laukel, M., Chistoserdova, L., Lidstrom, M. E., and Vorholt, J. A. (2003). The tungsten-containing formate dehydrogenase from Methylobacterium extorquens AMI: purification and properties. Eur. J. Biochem. 270, 325-333.
-
(2003)
Eur. J. Biochem.
, vol.270
, pp. 325-333
-
-
Laukel, M.1
Chistoserdova, L.2
Lidstrom, M.E.3
Vorholt, J.A.4
-
117
-
-
51149209341
-
Trace elements and nitrification
-
Lees, H., and Meiklejohn, J. (1948). Trace elements and nitrification. Nature 161, 398-399.
-
(1948)
Nature
, vol.161
, pp. 398-399
-
-
Lees, H.1
Meiklejohn, J.2
-
118
-
-
30744460928
-
Electron transport in the pathway of acetate conversion to methane in the marine archaeon Methanosardna acetivorans
-
Li, Q., Li, L, Rejtar, T., Lessner, D. J., Karger, B. L., and Ferry, J. G. (2006). Electron transport in the pathway of acetate conversion to methane in the marine archaeon Methanosardna acetivorans. J. Bacteriol 188, 702-710.
-
(2006)
J. Bacteriol
, vol.188
, pp. 702-710
-
-
Li, Q.1
Li, L.2
Rejtar, T.3
Lessner, D.J.4
Karger, B.L.5
Ferry, J.G.6
-
119
-
-
15044356424
-
Crystal structure of a membrane-bound metalloenzyme that catalyses the biological oxidation of methane
-
Lieberman, R. L., and Rosenzweig, A. C. (2005). Crystal structure of a membrane-bound metalloenzyme that catalyses the biological oxidation of methane. Nature 434, 177-182.
-
(2005)
Nature
, vol.434
, pp. 177-182
-
-
Lieberman, R.L.1
Rosenzweig, A.C.2
-
120
-
-
0025037588
-
Enhanced cytochrome formation and stimulated methanogenesis rate by the increased ferrous concentrations in Methanosardna barkeri culture
-
Lin, D., Kakizono, T., Nishio, N., and Nagai, S. (1990). Enhanced cytochrome formation and stimulated methanogenesis rate by the increased ferrous concentrations in Methanosardna barkeri culture. FEMS Mkrobiol Lett. 68, 89-92.
-
(1990)
FEMS Mkrobiol Lett
, vol.68
, pp. 89-92
-
-
Lin, D.1
Kakizono, T.2
Nishio, N.3
Nagai, S.4
-
121
-
-
0001321503
-
Influence of Co Ni + and Fe + on the production of tetrapyrroles by Methanosardna barkeri
-
Lin, D. G., Nishio, N., Mazumder, T. K., and Nagai, S. (1989). Influence of Co, Ni + and Fe + on the production of tetrapyrroles by Methanosardna barkeri. Appl. Mkrobiol. Biotechnol. 30,196-200.
-
(1989)
Appl. Mkrobiol. Biotechnol.
, vol.30
, pp. 196-200
-
-
Lin, D.G.1
Nishio, N.2
Mazumder, T.K.3
Nagai, S.4
-
122
-
-
0028090067
-
Biochemistry of the soluble methane monooxygenase
-
Lipscomb, J. D. (1994). Biochemistry of the soluble methane monooxygenase. Annu. Rev. Microbiol 48, 371-399.
-
(1994)
Annu. Rev. Microbiol
, vol.48
, pp. 371-399
-
-
Lipscomb, J.D.1
-
123
-
-
0000217771
-
Diazotrophy and nitrogenase activity in the archaebacterium Methanosardna barkeri 227
-
Lobo, A. L., and Zinder, S. H. (1988). Diazotrophy and nitrogenase activity in the archaebacterium Methanosardna barkeri 227. Appl. Environ. Microbiol. 54, 1656-1661.
-
(1988)
Appl. Environ. Microbiol.
, vol.54
, pp. 1656-1661
-
-
Lobo, A.L.1
Zinder, S.H.2
-
124
-
-
61449255522
-
The archetype gamma-class carbonic anhydrase (Cam) contains iron when synthesized in vivo
-
Macauley, S. R., Zimmerman, S. A., Apolinario, E. E., Evilia, C, Hou, Y.-M., Ferry, J. G., and Sowers, K. R. (2009). The archetype gamma-class carbonic anhydrase (Cam) contains iron when synthesized in vivo. Biochemistry 48, 817-819.
-
(2009)
Biochemistry
, vol.48
, pp. 817-819
-
-
Macauley, S.R.1
Zimmerman, S.A.2
Apolinario, E.E.3
Evilia, C.4
Hou, Y.-M.5
Ferry, J.G.6
Sowers, K.R.7
-
125
-
-
79960186890
-
Impact of copper on the diversity, abundance and transcription of nitrite and nitrous oxide reductase genes in an urban European estuary
-
Magalhaes, C. M., Machado, A., Matos, P., and Bordalo, A. A. (2011). Impact of copper on the diversity, abundance and transcription of nitrite and nitrous oxide reductase genes in an urban European estuary. FEMS Microbiol. Ecol. 77, 274-284.
-
(2011)
FEMS Microbiol. Ecol.
, vol.77
, pp. 274-284
-
-
Magalhaes, C.M.1
Machado, A.2
Matos, P.3
Bordalo, A.A.4
-
126
-
-
84986767551
-
Interstitial water chemistry of anoxic Long Island Sound sediments 1. Dissolved gases
-
Martens, C. S., and Berner, R. A. (1977). Interstitial water chemistry of anoxic Long Island Sound sediments. 1. Dissolved gases. Limnol. Oceanogr. 22,10-25.
-
(1977)
Limnol. Oceanogr.
, vol.22
, pp. 10-25
-
-
Martens, C.S.1
Berner, R.A.2
-
127
-
-
18144415055
-
Iron deficiency limits phytoplankton growth in the north-east Pacific subarctic
-
Martin, J. H., and Fitzwater, S. E. (1988). Iron deficiency limits phytoplankton growth in the north-east Pacific subarctic. Nature 331, 341-343.
-
(1988)
Nature
, vol.331
, pp. 341-343
-
-
Martin, J.H.1
Fitzwater, S.E.2
-
128
-
-
37549052557
-
Mossbauer studies of the membrane-associated methane monooxygenase from Methylococcus capsuhtus Bath: evidence for a diiron center
-
Martinho, M., Choi, D. W., DiSpirito, A. A., Antholine, W. E., Semrau, J. D., and Miinck, E. (2007). Mossbauer studies of the membrane-associated methane monooxygenase from Methylococcus capsuhtus Bath: evidence for a diiron center. J Am. Chem. Soc. 129, 15783-15785.
-
(2007)
J Am. Chem. Soc.
, vol.129
, pp. 15783-15785
-
-
Martinho, M.1
Choi, D.W.2
Dispirito, A.A.3
Antholine, W.E.4
Semrau, J.D.5
Miinck, E.6
-
129
-
-
0020025024
-
Modulation by copper of the products of nitrite respiration in Pseudomonas perfectomarinus
-
Matsubara, T., Frunzke, K., and Zumft, W. (1982). Modulation by copper of the products of nitrite respiration in Pseudomonas perfectomarinus. J. Bacteriol. 149,816-823.
-
(1982)
J. Bacteriol.
, vol.149
, pp. 816-823
-
-
Matsubara, T.1
Frunzke, K.2
Zumft, W.3
-
130
-
-
49449096406
-
Structure of an F430 variant from archaea associated with anaerobic oxidation of methane
-
Mayr, S., Latkoczy, C, Kriiger, M., Giinther, D., Shima, S., Thauer, R. K., Widdel, E, and Jaun, B. (2008). Structure of an F430 variant from archaea associated with anaerobic oxidation of methane. J Am. Chem. Soc. 130,10758-10767.
-
(2008)
J Am. Chem. Soc.
, vol.130
, pp. 10758-10767
-
-
Mayr, S.1
Latkoczy, C.2
Kriiger, M.3
Giinther, D.4
Shima, S.5
Thauer, R.K.6
Widdel, E.7
Jaun, B.8
-
131
-
-
77049157516
-
Iron and the nitrifying bacteria
-
Meiklejohn, J. (1953). Iron and the nitrifying bacteria. J Gen. Microbiol. 8, 58-65.
-
(1953)
J Gen. Microbiol
, vol.8
, pp. 58-65
-
-
Meiklejohn, J.1
-
132
-
-
0035800409
-
Dioxygen activation and methane hydroxylation by soluble methane monooxygenase: a tale of two irons and three proteins
-
Merkx, M., Kopp, D. A., Sazinsky, M. H., Blazyk, J. L, Miiller, J., and Lippard, S. J. (2001). Dioxygen activation and methane hydroxylation by soluble methane monooxygenase: a tale of two irons and three proteins. Angew. Chem. Int. Ed. Engl. 40, 2782-2807.
-
(2001)
Angew. Chem. Int. Ed. Engl.
, vol.40
, pp. 2782-2807
-
-
Merkx, M.1
Kopp, D.A.2
Sazinsky, M.H.3
Blazyk, J.L.4
Miiller, J.5
Lippard, S.J.6
-
133
-
-
28644445727
-
Insights into the genomes of archaea mediating the anaerobic oxidation of methane
-
Meyerdiercks, A.,Kube, M., Lombardot, T., Knittel, K., Bauer, M., Glockner, F. O., Reinhardt, R., and Amann, R. (2005). Insights into the genomes of archaea mediating the anaerobic oxidation of methane. Environ. Microbiol. 7, 1937-1951.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 1937-1951
-
-
Meyerdiercks, A.1
Kube, M.2
Lombardot, T.3
Knittel, K.4
Bauer, M.5
Glockner, F.O.6
Reinhardt, R.7
Amann, R.8
-
134
-
-
34047155674
-
Cu complexation by organic ligands in the subarctic NW Pacific and Bering Sea
-
Moffett, J. W., and Dupont, C. (2007). Cu complexation by organic ligands in the subarctic NW Pacific and Bering Sea. Deep Sea Res. Part I Oceanogr. Res. Pap. 54, 586-595.
-
(2007)
Deep Sea Res. Part I Oceanogr. Res. Pap.
, vol.54
, pp. 586-595
-
-
Moffett, J.W.1
Dupont, C.2
-
135
-
-
79961159499
-
Non-CO2 greenhouse gases and climate change
-
Montzka, S., Dlugokencky, E., and Butler, J. (2011). Non-CO2 greenhouse gases and climate change. Nature 476,43-50.
-
(2011)
Nature
, vol.476
, pp. 43-50
-
-
Montzka, S.1
Dlugokencky, E.2
Butler, J.3
-
136
-
-
0033384202
-
Chemical influences on trace metal-sulfide interactions in anoxic sediments
-
Morse, J. W., and Luther, G. W. (1999). Chemical influences on trace metal-sulfide interactions in anoxic sediments. Geochim. Cosmochim. Acta 63, 3373-3378.
-
(1999)
Geochim. Cosmochim. Acta
, vol.63
, pp. 3373-3378
-
-
Morse, J.W.1
Luther, G.W.2
-
137
-
-
0034548735
-
Bioavailability of chelated and soil-adsorbed copper to Methylosinus trichosporium OB3b
-
Morton, J. D., Hayes, K. F., and Semrau, J. D. (2000). Bioavailability of chelated and soil-adsorbed copper to Methylosinus trichosporium OB3b. Environ. Sci. Technol. 34,4917-4922.
-
(2000)
Environ. Sci. Technol.
, vol.34
, pp. 4917-4922
-
-
Morton, J.D.1
Hayes, K.F.2
Semrau, J.D.3
-
138
-
-
0001513589
-
Effects of nickel, cobalt, and molybdenum on performance of methanogenic fixed-film reactors
-
Murray, W. D., and van den Berg, L. (1981). Effects of nickel, cobalt, and molybdenum on performance of methanogenic fixed-film reactors. Appl. Environ. Microbiol. 42, 502-505.
-
(1981)
Appl. Environ. Microbiol.
, vol.42
, pp. 502-505
-
-
Murray, W.D.1
Van Den Berg, L.2
-
139
-
-
0034192166
-
Regulation of expression of methane monooxygenases by copper ions
-
Murrell, J. C, McDonald, I. R., and Gilbert, B. (2000). Regulation of expression of methane monooxygenases by copper ions. Trends Microbiol. 8, 221-225.
-
(2000)
Trends Microbiol
, vol.8
, pp. 221-225
-
-
Murrell, J.C.1
Mcdonald, I.R.2
Gilbert, B.3
-
140
-
-
0030753674
-
Copper-dependent reciprocal transcriptional regulation of methane monooxygenase genes in Methylococcus capsulatus and Methylosinus trichosporium
-
Nielsen, A. K., Gerdes, K., and Murrell, J. C. (1997). Copper-dependent reciprocal transcriptional regulation of methane monooxygenase genes in Methylococcus capsulatus and Methylosinus trichosporium. Mol. Microbiol. 25, 399-409.
-
(1997)
Mol. Microbiol.
, vol.25
, pp. 399-409
-
-
Nielsen, A.K.1
Gerdes, K.2
Murrell, J.C.3
-
141
-
-
34248387742
-
Structure and function of a hexameric copper-containing nitrite reductase
-
Nojiri, M., Xie, Y., Inoue, T., Matsumura, H., Kataoka, K., Deligeer, Yamaguchi, K., Kai, Y, and Suzuki, S. (2007). Structure and function of a hexameric copper-containing nitrite reductase. Proc. Natl. Acad. Sci. U.S.A. 104,4315-4320.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 4315-4320
-
-
Nojiri, M.1
Xie, Y.2
Inoue, T.3
Matsumura, H.4
Kataoka, K.5
Deligeer, Y.K.6
Kai, Y.7
Suzuki, S.8
-
142
-
-
78649704686
-
Environmental, genomic and taxonomic perspectives onmethanotrophicVerrucomicrobia
-
Op Den Camp, H. J. M., Islam, T., Stott, M. B., Harhangi, H. R., Hynes, A., Schouten, S., Jetten, M. S. M., Birkeland, N.-K., Pol, A., and Dunfield, P. F. (2009). Environmental, genomic and taxonomic perspectives onmethanotrophicVerrucomicrobia. Environ. Microbiol. Rep. 1, 293-306.
-
(2009)
Environ. Microbiol. Rep
, vol.1
, pp. 293-306
-
-
Op Den Camp, H.J.M.1
Islam, T.2
Stott, M.B.3
Harhangi, H.R.4
Hynes, A.5
Schouten, S.6
Jetten, M.S.M.7
Birkeland, N.-K.8
Pol, A.9
Dunfield, P.F.10
-
143
-
-
0035919654
-
Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis
-
Orphan, V. J., House, C. H., Hinrichs, K.-U., McKeegan, K. D., and DeLong, E. F. (2001). Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis. Science 293, 484-487.
-
(2001)
Science
, vol.293
, pp. 484-487
-
-
Orphan, V.J.1
House, C.H.2
Hinrichs, K.-U.3
Mckeegan, K.D.4
Delong, E.F.5
-
144
-
-
0037188554
-
Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments
-
Orphan, V. J., House, C. H., Hinrichs, K.-U., McKeegan, K. D., and DeLong, E. F. (2002). Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments. Proc. Natl. Acad. Sci. U.S.A. 99, 7663-7668.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 7663-7668
-
-
Orphan, V.J.1
House, C.H.2
Hinrichs, K.-U.3
Mckeegan, K.D.4
Delong, E.F.5
-
145
-
-
0018172353
-
Optimum levels of sulphate and iron for the cultivation of pure cultures of methanogens in synthetic media
-
Patel, G., Khan, A., and Roth, L. (1978). Optimum levels of sulphate and iron for the cultivation of pure cultures of methanogens in synthetic media. J Appl. Microbiol. 45, 347-356.
-
(1978)
J Appl. Microbiol.
, vol.45
, pp. 347-356
-
-
Patel, G.1
Khan, A.2
Roth, L.3
-
146
-
-
44349119350
-
Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics
-
Pernthaler, A., Dekas, A. E., Brown, C. T., Goffredi, S. K., Embaye, T., and Orphan, V. J. (2008). Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics. Proc. Natl. Acad. Sci. U.S.A. 105, 7052-7057.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 7052-7057
-
-
Pernthaler, A.1
Dekas, A.E.2
Brown, C.T.3
Goffredi, S.K.4
Embaye, T.5
Orphan, V.J.6
-
147
-
-
0034072208
-
New functions for the ancient globin family: bacterial responses to nitric oxide and nitrosative stress
-
Poole, R. K., and Hughes, M. N. (2000). New functions for the ancient globin family: bacterial responses to nitric oxide and nitrosative stress. Mol. Microbiol. 36, 775-783.
-
(2000)
Mol. Microbiol.
, vol.36
, pp. 775-783
-
-
Poole, R.K.1
Hughes, M.N.2
-
148
-
-
0022455018
-
Dinitrogen production from nitrite by a Nitrosomonas isolate
-
Poth, M. (1986). Dinitrogen production from nitrite by a Nitrosomonas isolate. Appl. Environ. Microbiol. 52, 957-959.
-
(1986)
Appl. Environ. Microbiol.
, vol.52
, pp. 957-959
-
-
Poth, M.1
-
149
-
-
0021836750
-
15N kinetic analysis of N2O production by Nitrosomonas europaea: an examination of nitrifier denitrification
-
Poth, M., and Focht, D. D. (1985). 15N kinetic analysis of N2O production by Nitrosomonas europaea: an examination of nitrifier denitrification. Appl. Environ. Microbiol. 49, 1134-1141.
-
(1985)
Appl. Environ. Microbiol.
, vol.49
, pp. 1134-1141
-
-
Poth, M.1
Focht, D.D.2
-
150
-
-
33847720244
-
Oceanic methane biogeochemistry
-
Reeburgh, W. S. (2007). Oceanic methane biogeochemistry. Chem. Rev. 107,486-513.
-
(2007)
Chem. Rev.
, vol.107
, pp. 486-513
-
-
Reeburgh, W.S.1
-
151
-
-
0024670961
-
A hydrogenase-linked gene in Methanobacterium thermoautotrophicum strain delta H encodes a polyferredoxin
-
Reeve, J. N., Beckler, G. S., Cram, D. S., Hamilton, P. T., Brown, J. W., Krzycki, J. A., Kolodziej, A. E, Alex, L., Orme-Johnson, W. H., and Walsh, C. T. (1989). A hydrogenase-linked gene in Methanobacterium thermoautotrophicum strain delta H encodes a polyferredoxin. Proc. Natl. Acad. Sci. U.S.A. 86, 3031-3035.
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 3031-3035
-
-
Reeve, J.N.1
Beckler, G.S.2
Cram, D.S.3
Hamilton, P.T.4
Brown, J.W.5
Krzycki, J.A.6
Kolodziej, A.E.7
Alex, L.8
Orme-Johnson, W.H.9
Walsh, C.T.10
-
152
-
-
0033831606
-
Production and consumption of nitric oxide by three methanotrophic bacteria
-
Ren, T., Roy, R., and Knowles, R. (2000). Production and consumption of nitric oxide by three methanotrophic bacteria. Appl. Environ. Microbiol. 66,3891-3897.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 3891-3897
-
-
Ren, T.1
Roy, R.2
Knowles, R.3
-
153
-
-
0015313851
-
Identification of the sources of nitrous oxide produced by oxidative and reductive processes in Nitrosomonas europaea
-
Ritchie, G. A., and Nicholas, D.J. (1972). Identification of the sources of nitrous oxide produced by oxidative and reductive processes in Nitrosomonas europaea. Biochem. J. 126, 1181-1191.
-
(1972)
Biochem. J.
, vol.126
, pp. 1181-1191
-
-
Ritchie, G.A.1
Nicholas, D.J.2
-
154
-
-
33644894229
-
Comparative and functional genomic analysis of prokaryotic nickel and cobalt uptake transporters: evidence for a novel group of ATP-binding cassette transporters
-
Rodionov, D. A., Hebbeln, P., Gelfand, M. S., and Eitinger, T. (2006). Comparative and functional genomic analysis of prokaryotic nickel and cobalt uptake transporters: evidence for a novel group of ATP-binding cassette transporters. J Bacteriol. 188,317-327.
-
(2006)
J Bacteriol
, vol.188
, pp. 317-327
-
-
Rodionov, D.A.1
Hebbeln, P.2
Gelfand, M.S.3
Eitinger, T.4
-
156
-
-
50149115452
-
Biosynthesis of the iron-molybdenum cofactor of nitrogenase
-
Rubio, L. M., and Ludden, P. W. (2008). Biosynthesis of the iron-molybdenum cofactor of nitrogenase. Annu. Rev. Microbiol. 62, 93-111.
-
(2008)
Annu. Rev. Microbiol.
, vol.62
, pp. 93-111
-
-
Rubio, L.M.1
Ludden, P.W.2
-
157
-
-
38749152385
-
Some thoughts on the concept of colimitation: three definitions and the importance of bioavailability
-
Saito, M. A., Goepfert, T. J., and Ritt, J. T. (2008). Some thoughts on the concept of colimitation: three definitions and the importance of bioavailability. Limnol. Oceanogr. 53, 276-290.
-
(2008)
Limnol. Oceanogr.
, vol.53
, pp. 276-290
-
-
Saito, M.A.1
Goepfert, T.J.2
Ritt, J.T.3
-
158
-
-
0032824980
-
Impact of heavy metals on denitrification in surface wetland sediments receiving wastewater
-
Sakadevan, K., Zheng, H., and Bavor, H. J. (1999). Impact of heavy metals on denitrification in surface wetland sediments receiving wastewater. Water Sci. Technol. 40,349-355.
-
(1999)
Water Sci. Technol.
, vol.40
, pp. 349-355
-
-
Sakadevan, K.1
Zheng, H.2
Bavor, H.J.3
-
159
-
-
80052490842
-
Isotopic signature of N2O produced by marine ammonia-oxidizing archaea
-
Santoro, A. E., Buchwald, C, Mcllvin, M. R., and Casciotti, K. L. (2011). Isotopic signature of N2O produced by marine ammonia-oxidizing archaea. Science 333, 1282-1285.
-
(2011)
Science
, vol.333
, pp. 1282-1285
-
-
Santoro, A.E.1
Buchwald, C.2
Mcllvin, M.R.3
Casciotti, K.L.4
-
160
-
-
0022558376
-
420-dependent formate dehydrogenase from Methanobacterium formicicum
-
420-dependent formate dehydrogenase from Methanobacterium formicicum. I Bacteriol. 165,405-411.
-
(1986)
I Bacteriol
, vol.165
, pp. 405-411
-
-
Schauer, N.L.1
Ferry, J.G.2
-
161
-
-
77953222884
-
The key nickel enzyme of methanogenesis catalyses the anaerobic oxidation of methane
-
Scheller, S., Goenrich, M., Boecher, R., Thauer, R. K., and Jaun, B. (2010). The key nickel enzyme of methanogenesis catalyses the anaerobic oxidation of methane. Nature 465, 606-608.
-
(2010)
Nature
, vol.465
, pp. 606-608
-
-
Scheller, S.1
Goenrich, M.2
Boecher, R.3
Thauer, R.K.4
Jaun, B.5
-
162
-
-
12944313453
-
Vanadium and molybdenum requirement for the fixation of molecular nitrogen by two Methanosardna strains
-
Scherer, P. (1988). Vanadium and molybdenum requirement for the fixation of molecular nitrogen by two Methanosardna strains. Arch. Microbiol. 151,44-48.
-
(1988)
Arch. Microbiol.
, vol.151
, pp. 44-48
-
-
Scherer, P.1
-
163
-
-
52449145365
-
Composition of the major elements and trace elements of 10 methanogenic bacteria determined by inductively coupled plasma emission spectrometry
-
Scherer, P., Lippert, H., and Wolff, G. (1983). Composition of the major elements and trace elements of 10 methanogenic bacteria determined by inductively coupled plasma emission spectrometry. Biol. Trace Elem. Res. 5, 149-163.
-
(1983)
Biol. Trace Elem. Res.
, vol.5
, pp. 149-163
-
-
Scherer, P.1
Lippert, H.2
Wolff, G.3
-
164
-
-
84984097307
-
Effect of trace elements and vitamins on the growth of Methanosardna barkeri
-
Scherer, P., and Sahm, H. (1981). Effect of trace elements and vitamins on the growth of Methanosardna barkeri. Acta Biotechnol. 1, 57-65.
-
(1981)
Acta Biotechnol
, vol.1
, pp. 57-65
-
-
Scherer, P.1
Sahm, H.2
-
165
-
-
58549094586
-
On the fate of anthropogenic nitrogen
-
Schlesinger, W. H. (2009). On the fate of anthropogenic nitrogen. Proc. Natl. Acad. Sci. U.S.A. 106,203-208.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 203-208
-
-
Schlesinger, W.H.1
-
166
-
-
0018665618
-
Nickel, cobalt, and molybdenum requirement for growth of Methanobacterium thermoautotrophicum
-
Schonheit, P., Moll, J., and Thauer, R. K. (1979). Nickel, cobalt, and molybdenum requirement for growth of Methanobacterium thermoautotrophicum. Arch. Microbiol. 123, 105-107.
-
(1979)
Arch. Microbiol.
, vol.123
, pp. 105-107
-
-
Schonheit, P.1
Moll, J.2
Thauer, R.K.3
-
167
-
-
41349120544
-
Tracing the step-wise oxygenation of the Proterozoic ocean
-
Scott, C, Lyons, T. W., Bekker, A., Shen, Y., Poulton, S. W., Chu, X., and Anbar, A. D. (2008). Tracing the step-wise oxygenation of the Proterozoic ocean. Nature 452, 456-459.
-
(2008)
Nature
, vol.452
, pp. 456-459
-
-
Scott, C.1
Lyons, T.W.2
Bekker, A.3
Shen, Y.4
Poulton, S.W.5
Chu, X.6
Anbar, A.D.7
-
168
-
-
84867185306
-
Bioremediation via methanotrophy: overview of recent findings and suggestions for future research
-
doi:10.3389/fmicb.2011.00209
-
Semrau, J. D. (2011). Bioremediation via methanotrophy: overview of recent findings and suggestions for future research. Front. Microbiol. 2:209. doi:10.3389/fmicb.2011.00209
-
(2011)
Front. Microbiol.
, vol.2
, pp. 209
-
-
Semrau, J.D.1
-
169
-
-
77953215053
-
Methanotrophs and copper
-
Semrau, J. D., DiSpirito, A. A., and Yoon, S. (2010). Methanotrophs and copper. FEMS Microbiol. Rev. 34, 496-531.
-
(2010)
FEMS Microbiol. Rev
, vol.34
, pp. 496-531
-
-
Semrau, J.D.1
Dispirito, A.A.2
Yoon, S.3
-
170
-
-
33644851085
-
Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway
-
Shaw, L. J., Nicol, G. W., Smith, Z., Fear, J., Prosser, J. I., and Baggs, E. M. (2006). Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway. Environ. Microbiol. 8,214-222.
-
(2006)
Environ. Microbiol.
, vol.8
, pp. 214-222
-
-
Shaw, L.J.1
Nicol, G.W.2
Smith, Z.3
Fear, J.4
Prosser, J.I.5
Baggs, E.M.6
-
171
-
-
0025682045
-
Early diagenesis in differing depositional environments: the response of transition metals in pore water
-
Shaw, T. J., Gieskes, J. M., and Jahnke, R. A. (1990). Early diagenesis in differing depositional environments: the response of transition metals in pore water. Geochim. Cosmochim. Acta 54, 1233-1246.
-
(1990)
Geochim. Cosmochim. Acta
, vol.54
, pp. 1233-1246
-
-
Shaw, T.J.1
Gieskes, J.M.2
Jahnke, R.A.3
-
172
-
-
79953655381
-
Biosynthesis of complex iron-sulfur enzymes
-
Shepard, E. M., Boyd, E. S., Broderick, J. B., and Peters, J. W. (2011). Biosynthesis of complex iron-sulfur enzymes. Curr. Opin. Chetn. Biol. 15, 319-327.
-
(2011)
Curr. Opin. Chetn. Biol.
, vol.15
, pp. 319-327
-
-
Shepard, E.M.1
Boyd, E.S.2
Broderick, J.B.3
Peters, J.W.4
-
173
-
-
48249129653
-
The crystal structure of [Fe]-hydrogenase reveals the geometry of the active site
-
Shima, S., Pilak, O., Vogt, S., Schick, M., Stagni, M.S., Meyer-Klaucke, W., Warkentin, E., Thauer, R. K., and Ermler, U. (2008). The crystal structure of [Fe]-hydrogenase reveals the geometry of the active site. Science 321,572-575.
-
(2008)
Science
, vol.321
, pp. 572-575
-
-
Shima, S.1
Pilak, O.2
Vogt, S.3
Schick, M.4
Stagni, M.S.5
Meyer-Klaucke, W.6
Warkentin, E.7
Thauer, R.K.8
Ermler, U.9
-
174
-
-
0032516483
-
Purification and properties of the heme-and iron-sulfur-containing heterodisulfide reductase from Methanosardna thermophila
-
Simianu, M., Murakami, E., Brewer, J. M., and Ragsdale, S. W. (1998). Purification and properties of the heme-and iron-sulfur-containing heterodisulfide reductase from Methanosardna thermophila. Biochemistry 37,10027-10039.
-
(1998)
Biochemistry
, vol.37
, pp. 10027-10039
-
-
Simianu, M.1
Murakami, E.2
Brewer, J.M.3
Ragsdale, S.W.4
-
175
-
-
0021837937
-
Trace metal and vitamin requirements of Methanococcoides methylutens grown with trimethylamine
-
Sowers, K. R., and Ferry, J. G. (1985). Trace metal and vitamin requirements of Methanococcoides methylutens grown with trimethylamine. Arch. Microbiol. 142, 148-151.
-
(1985)
Arch. Microbiol.
, vol.142
, pp. 148-151
-
-
Sowers, K.R.1
Ferry, J.G.2
-
176
-
-
0020566611
-
Nickel stimulation of anaerobic digestion
-
Speece, R. E., Parkin, G. F., and Gallagher, D. (1983). Nickel stimulation of anaerobic digestion. Water Res. 17, 677-683.
-
(1983)
Water Res
, vol.17
, pp. 677-683
-
-
Speece, R.E.1
Parkin, G.F.2
Gallagher, D.3
-
177
-
-
0020559210
-
Copper stress underlies the fundamental change in intracellular location of methane monooxygenase in methane-oxidizing organisms: studies in batch and continuous cultures
-
Stanley, S. H., Prior, S. D., Leak, D., and Dalton, H. (1983). Copper stress underlies the fundamental change in intracellular location of methane monooxygenase in methane-oxidizing organisms: studies in batch and continuous cultures. Biotechnol. Lett. 5, 487-492.
-
(1983)
Biotechnol. Lett
, vol.5
, pp. 487-492
-
-
Stanley, S.H.1
Prior, S.D.2
Leak, D.3
Dalton, H.4
-
178
-
-
78650943696
-
Surveying N2O-producing pathways in bacteria
-
Stein, L. Y. (2011). Surveying N2O-producing pathways in bacteria. Meth. Enzymol. 486,131-152.
-
(2011)
Meth. Enzymol.
, vol.486
, pp. 131-152
-
-
Stein, L.Y.1
-
179
-
-
35948986372
-
Whole genome analysis of the ammonia oxidizing bacterium Nitrosomonas eutropha C91: implications for niche adaptation
-
Stein, L. Y, Arp, D. J., Berube, P. M., Chain, P. S., Hauser, L., Jetten, M. S., Klotz, M. G., Larimer, F. W., Norton, J. M., Op den Camp, H. J. M., Shin, M., and Wei, X. (2007). Whole genome analysis of the ammonia oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation. Environ. Microbiol. 9, 2993-3007.
-
(2007)
Environ. Microbiol
, vol.9
, pp. 2993-3007
-
-
Stein, L.Y.1
Arp, D.J.2
Berube, P.M.3
Chain, P.S.4
Hauser, L.5
Jetten, M.S.6
Klotz, M.G.7
Larimer, F.W.8
Norton, J.M.9
Op den Camp, H.J.M.10
Shin, M.11
Wei, X.12
-
180
-
-
33644848890
-
Distinguishing nitrous oxide production from nitrification and denitrification on the basis of isotopomer abundances
-
Sutka, R. L., Ostrom, N. E., Ostrom, P. H., Breznak, J. A., Gandhi, H., Pitt, A. J., and Li, F. (2006). Distinguishing nitrous oxide production from nitrification and denitrification on the basis of isotopomer abundances. Appl. Environ. Microbiol. 72, 638-644.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 638-644
-
-
Sutka, R.L.1
Ostrom, N.E.2
Ostrom, P.H.3
Breznak, J.A.4
Gandhi, H.5
Pitt, A.J.6
Li, F.7
-
181
-
-
17144394461
-
Advances in analytical methodology for bioinorganic speciation analysis: metallomics, metalloproteomics and heteroatom- tagged proteomics and metabolomics
-
Szpunar, J. (2005). Advances in analytical methodology for bioinorganic speciation analysis: metallomics, metalloproteomics and heteroatom- tagged proteomics and metabolomics. Analyst 130, 442-465.
-
(2005)
Analyst
, vol.130
, pp. 442-465
-
-
Szpunar, J.1
-
182
-
-
79954467923
-
Minimum requirements for trace metals (iron, nickel, cobalt, and zinc) in thermophilic and mesophilic methane fermentation from glucose
-
Takashima, M., Shimada, K., and Speece, R. E. (2011). Minimum requirements for trace metals (iron, nickel, cobalt, and zinc) in thermophilic and mesophilic methane fermentation from glucose. Water Environ. Res. 83, 339-346.
-
(2011)
Water Environ. Res.
, vol.83
, pp. 339-346
-
-
Takashima, M.1
Shimada, K.2
Speece, R.E.3
-
183
-
-
0024954667
-
Mineral requirements for methane fermentation
-
Takashima, M., and Speece, R.E. (1990). Mineral requirements for methane fermentation. Crit. Rev. Environ. Control 19,465-479.
-
(1990)
Crit. Rev. Environ. Control
, vol.19
, pp. 465-479
-
-
Takashima, M.1
Speece, R.E.2
-
184
-
-
0017395610
-
Nutrition and factors limiting the growth of a methanogenic bacterium Methanobacterium thermoautotrophicum
-
Taylor, G. T., and Pirt, S. J. (1977). Nutrition and factors limiting the growth of a methanogenic bacterium (Methanobacterium thermoautotrophicum). Arch. Microbiol. 113, 17-22.
-
(1977)
Arch. Microbiol
, vol.113
, pp. 17-22
-
-
Taylor, G.T.1
Pirt, S.J.2
-
185
-
-
0023926975
-
Purification and characterization of a ferredoxin from acetate-grown Methanosardna thermophila
-
Terlesky, K., and Ferry, J. (1988). Purification and characterization of a ferredoxin from acetate-grown Methanosardna thermophila. J. Biol. Chem. 263,4080-4082.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 4080-4082
-
-
Terlesky, K.1
Ferry, J.2
-
186
-
-
0033568398
-
Methanobacterium thermo-autotrophicum encodes two multisubunit membrane-bound [NiFe] hydrogenases
-
Tersteegen, A., and Hedderich, R. (1999). Methanobacterium thermo-autotrophicum encodes two multisubunit membrane-bound [NiFe] hydrogenases. Eur. J. Biochem. 264, 930-943.
-
(1999)
Eur. J. Biochem.
, vol.264
, pp. 930-943
-
-
Tersteegen, A.1
Hedderich, R.2
-
187
-
-
0031685510
-
Biochemistry of methanogenesis: a tribute to Marjory Stephenson
-
Thauer, R. K. (1998). Biochemistry of methanogenesis: a tribute to Marjory Stephenson. Microbiology 144, 2377-2406.
-
(1998)
Microbiology
, vol.144
, pp. 2377-2406
-
-
Thauer, R.K.1
-
188
-
-
79959319231
-
Anaerobic oxidation of methane with sulfate: on the reversibility of the reactions that are catalyzed by enzymes also involved in methanogenesis from CO2
-
Thauer, R. K. (2011). Anaerobic oxidation of methane with sulfate: on the reversibility of the reactions that are catalyzed by enzymes also involved in methanogenesis from CO2. Curr. Opin. Microbiol. 14, 292-299.
-
(2011)
Curr. Opin. Microbiol.
, vol.14
, pp. 292-299
-
-
Thauer, R.K.1
-
189
-
-
77953624603
-
Hydrogenases from methanogenic archaea, nickel, a novel cofactor, and H2 storage
-
Thauer, R. K., Raster, A.-K., Goenrich, M., Schick, M., Hiromoto, T., and Shima, S. (2010). Hydrogenases from methanogenic archaea, nickel, a novel cofactor, and H2 storage. Annu. Rev. Biochem. 79, 507-536.
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 507-536
-
-
Thauer, R.K.1
Raster, A.-K.2
Goenrich, M.3
Schick, M.4
Hiromoto, T.5
Shima, S.6
-
190
-
-
47549119041
-
Methanogenic archaea: ecologically relevant differences in energy conservation
-
Thauer, R. K., Raster, A.-K., Seedorf, H., Buckel, W., and Hedderich, R. (2008). Methanogenic archaea: ecologically relevant differences in energy conservation. Nat. Rev. Microbiol. 6, 579-591.
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 579-591
-
-
Thauer, R.K.1
Raster, A.-K.2
Seedorf, H.3
Buckel, W.4
Hedderich, R.5
-
191
-
-
41349105149
-
Methane as fuel for anaerobic microorganisms
-
Thauer, R. K., and Shima, S. (2008). Methane as fuel for anaerobic microorganisms. Ann. N. Y. Acad. Sci. 1125, 158-170.
-
(2008)
Ann. N. Y. Acad. Sci.
, vol.1125
, pp. 158-170
-
-
Thauer, R.K.1
Shima, S.2
-
192
-
-
41349106563
-
Metabolic aspects of aerobic obligate methanotrophy
-
Trotsenko, Y A., and Murrell, J. C. (2008). Metabolic aspects of aerobic obligate methanotrophy. Adv. Appl. Microbiol. 63, 183-229.
-
(2008)
Adv. Appl. Microbiol.
, vol.63
, pp. 183-229
-
-
Trotsenko, Y.A.1
Murrell, J.C.2
-
193
-
-
34547181743
-
Potential role of copper availability in nitrous oxide accumulation in a temperate lake
-
Twining, B. S., Mylon, S. E., and Benoit, G. (2007). Potential role of copper availability in nitrous oxide accumulation in a temperate lake. Limnol Oceanogr. 52, 1354-1366.
-
(2007)
Limnol Oceanogr
, vol.52
, pp. 1354-1366
-
-
Twining, B.S.1
Mylon, S.E.2
Benoit, G.3
-
194
-
-
33645462692
-
NO reductase activity of the tetraheme cytochrome C554 of Nitrosomonas europaea
-
Upadhyay, A. K., Hooper, A. B., and Hendrich, M. P. (2006). NO reductase activity of the tetraheme cytochrome C554 of Nitrosomonas europaea. J. Am. Chem. Soc. 128, 4330-4337.
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 4330-4337
-
-
Upadhyay, A.K.1
Hooper, A.B.2
Hendrich, M.P.3
-
195
-
-
34249895330
-
Clonothrix fusca Roze 1896, a filamentous, sheathed, methanotrophic gamma-proteobacterium
-
Vigliotta, G., Nutricati, E., Carata, E., Tredici, S. M., De Stefano, M., Pontieri, P., Massardo, D. R., Prati, M. V., De Bellis, L., and Alifano, P. (2007). Clonothrix fusca Roze 1896, a filamentous, sheathed, methanotrophic gamma-proteobacterium. Appl. Environ. Microbiol. 73, 3556-3565.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 3556-3565
-
-
Vigliotta, G.1
Nutricati, E.2
Carata, E.3
Tredici, S.M.4
De Stefano, M.5
Pontieri, P.6
Massardo, D.R.7
Prati, M.V.8
De Bellis, L.9
Alifano, P.10
-
196
-
-
0036042189
-
Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria
-
Vorholt, J. A. (2002). Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria. Arch. Microbiol. 178, 239-249.
-
(2002)
Arch. Microbiol.
, vol.178
, pp. 239-249
-
-
Vorholt, J.A.1
-
197
-
-
0029915852
-
A polyferredoxin with eight [4Fe-4S] clusters as a subunit of molybdenum formylmethanofuran dehydrogenase from Methanosardna barkeri
-
Vorholt, J. A., Vaupel, M., and Thauer, R. K. (1996). A polyferredoxin with eight [4Fe-4S] clusters as a subunit of molybdenum formylmethanofuran dehydrogenase from Methanosardna barkeri. Eur. J. Biochem. 236,309-317.
-
(1996)
Eur. J. Biochem.
, vol.236
, pp. 309-317
-
-
Vorholt, J.A.1
Vaupel, M.2
Thauer, R.K.3
-
198
-
-
77952739182
-
Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea
-
Walker, C, De La Torre, J., Klotz, M., Urakawa, H., Pinel, N., Arp, D., Brochier-Armanet, C, Chain, P., Chan, P., Gollabgir, A., Hemp, J., Hiigler, M., Karr, E. A., Konneke, M., Shin, M., Lawton, T. J., Lowe, T., Martens-Habbena, W, Sayavedra-Soto, L. A., Lang, D., Sievert, S. M., Rosenzweig, A. C, Manning, G., and Stahl, D. A. (2010). Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proc. Natl. Acad. Sci. U.S.A. 107, 8818-8823.
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 8818-8823
-
-
Walker, C.1
De La Torre, J.2
Klotz, M.3
Urakawa, H.4
Pinel, N.5
Arp, D.6
Brochier-Armanet, C.7
Chain, P.8
Chan, P.9
Gollabgir, A.10
Hemp, J.11
Hiigler, M.12
Karr, E.A.13
Konneke, M.14
Shin, M.15
Lawton, T.J.16
Lowe, T.17
Martens-Habbena, W.18
Sayavedra-Soto, L.A.19
Lang, D.20
Sievert, S.M.21
Rosenzweig, A.C.22
Manning, G.23
Stahl, D.A.24
more..
-
199
-
-
55649098796
-
Organic carbon, and not copper, controls denitrification in oxygen minimum zones of the ocean
-
Ward, B. B., Tuit, C. B., Jayakumar, A., Rich, J. J., Moffett, J., and Naqvi, S. W. A. (2008). Organic carbon, and not copper, controls denitrification in oxygen minimum zones of the ocean. Deep Sea Res. Parti Oceanogr. Res. Pap. 55, 1672-1683.
-
(2008)
Deep Sea Res. Parti Oceanogr. Res. Pap.
, vol.55
, pp. 1672-1683
-
-
Ward, B.B.1
Tuit, C.B.2
Jayakumar, A.3
Rich, J.J.4
Moffett, J.5
Naqvi, S.W.A.6
-
200
-
-
8844264574
-
Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath)
-
doi:10.1371/joumal.pbio.0020303
-
Ward, N., Larsen, 0., Sakwa, J., Bruseth, L., Khouri, H., Durkin, A. S., Dimitrov, G., Jiang, L., Scanlan, D., Kang, K. H., Lewis, M., Nelson, K. E., Methe, B., Wu, M., Heidelberg, J. E, Paulsen, I. T., Fouts, D., Ravel, J., Tettelin, H., Ren, Q., Read, T., DeBoy, R. T., Seshadri, R., Salzberg, S. L, Jensen, H. B., Birkeland, N. K., Nelson, W C, Dodson, R. J., Grindhaug, S. H., Holt, I., Eidhammer, I., Jonasen, I., Vanaken, S., Utterback, T., Feldblyum, T. V., Fraser, C. M., Lillehaug, J. R., and Eisen, J. A. (2004). Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath). PLoS Biol. 2, e303. doi:10.1371/joumal.pbio.0020303
-
(2004)
PLoS Biol
, vol.2
-
-
Ward, N.1
Larsen, 0.2
Sakwa, J.3
Bruseth, L.4
Khouri, H.5
Durkin, A.S.6
Dimitrov, G.7
Jiang, L.8
Scanlan, D.9
Kang, K.H.10
Lewis, M.11
Nelson, K.E.12
Methe, B.13
Wu, M.14
Heidelberg, J.E.15
Paulsen, I.T.16
Fouts, D.17
Ravel, J.18
Tettelin, H.19
Ren, Q.20
Read, T.21
Deboy, R.T.22
Seshadri, R.23
Salzberg, S.L.24
Jensen, H.B.25
Birkeland, N.K.26
Nelson, W.C.27
Dodson, R.J.28
Grindhaug, S.H.29
Holt, I.30
Eidhammer, I.31
Jonasen, I.32
Vanaken, S.33
Utterback, T.34
Feldblyum, T.V.35
Fraser, C.M.36
Lillehaug, J.R.37
Eisen, J.A.38
more..
-
201
-
-
33746432968
-
Iron nutrition and physiological responses to iron stress in Nitrosomonas europaea
-
Wei, X., Vajrala, N., Hauser, L, Sayavedra-Soto, L. A., and Arp, D. J. (2006). Iron nutrition and physiological responses to iron stress in Nitrosomonas europaea. Arch. Microbiol. 186, 107-118.
-
(2006)
Arch. Microbiol.
, vol.186
, pp. 107-118
-
-
Wei, X.1
Vajrala, N.2
Hauser, L.3
Sayavedra-Soto, L.A.4
Arp, D.J.5
-
203
-
-
0020051044
-
Nutrition and carbon metabolism of Methanococcus voltae
-
Whitman, W. B., Ankwanda, E., and Wolfe, R. S. (1982). Nutrition and carbon metabolism of Methanococcus voltae. J. Bacterial. 149, 852-863.
-
(1982)
J. Bacterial
, vol.149
, pp. 852-863
-
-
Whitman, W.B.1
Ankwanda, E.2
Wolfe, R.S.3
-
204
-
-
35148814913
-
The methanogenic bacteria
-
Whitman, W B., Bowen, T. L, and Boone, D. R. (2006). The methanogenic bacteria. Prokaryotes 3, 165-207.
-
(2006)
Prokaryotes
, vol.3
, pp. 165-207
-
-
Whitman, W.B.1
Bowen, T.L.2
Boone, D.R.3
-
205
-
-
0034663575
-
Electron transfer during the oxidation of ammonia by the chemolithotrophic bacterium Nitrosomonas europaea
-
Whittaker, M., Bergmann, D., Arciero, D., and Hooper, A. B. (2000). Electron transfer during the oxidation of ammonia by the chemolithotrophic bacterium Nitrosomonas europaea. Biochim. Biophys. Acta 1459, 346-355.
-
(2000)
Biochim. Biophys. Acta
, vol.1459
, pp. 346-355
-
-
Whittaker, M.1
Bergmann, D.2
Arciero, D.3
Hooper, A.B.4
-
206
-
-
0034792578
-
Role of nitrifier denitrification in the production of nitrous oxide
-
Wrage, N., Velthof, G. L., van Beusichem, M. L., and Oenema, O. (2001). Role of nitrifier denitrification in the production of nitrous oxide. Soil Biol. Biochem. 33, 1723-1732.
-
(2001)
Soil Biol. Biochem.
, vol.33
, pp. 1723-1732
-
-
Wrage, N.1
Velthof, G.L.2
van Beusichem, M.L.3
Oenema, O.4
-
207
-
-
79551503528
-
A new intra-aerobic metabolism in the nitrite-dependent anaerobic methane-oxidizing bacterium Candidatus 'Methylomirabilis oxyfera' Biochem
-
Wu, M. L., Ettwig, K. E, Jetten, M. S., Strous, M., Keltjens, J. T., and van Niftrik, L. (2011). A new intra-aerobic metabolism in the nitrite-dependent anaerobic methane-oxidizing bacterium Candidatus 'Methylomirabilis oxyfera' Biochem. Soc. Trans. 39, 243-248.
-
(2011)
Soc. Trans
, vol.39
, pp. 243-248
-
-
Wu, M.L.1
Ettwig, K.E.2
Jetten, M.S.3
Strous, M.4
Keltjens, J.T.5
van Niftrik, L.6
-
208
-
-
0021801402
-
Nitrite and nitrous oxide production by Methylosinus trichosporium
-
Yoshinari, T. (1985). Nitrite and nitrous oxide production by Methylosinus trichosporium. Can. J. Microbiol 31, 139-144.
-
(1985)
Can. J. Microbiol
, vol.31
, pp. 139-144
-
-
Yoshinari, T.1
-
209
-
-
0035161053
-
Membrane-associated quinoprotein formaldehyde dehydrogenase from Methylococcus capsulatus Bath
-
Zahn, J. A., Bergmann, D. J., Boyd, J. M., Kunz, R. C, and DiSpirito, A. A. (2001). Membrane-associated quinoprotein formaldehyde dehydrogenase from Methylococcus capsulatus Bath. J Bacterial. 183, 6832-6840.
-
(2001)
J Bacterial
, vol.183
, pp. 6832-6840
-
-
Zahn, J.A.1
Bergmann, D.J.2
Boyd, J.M.3
Kunz, R.C.4
Dispirito, A.A.5
-
210
-
-
0030067648
-
Membrane-associated methane monooxygenase from Methylococcus capsulatus (Bath)
-
Zahn, J. A., and DiSpirito, A. A. (1996). Membrane-associated methane monooxygenase from Methylococcus capsulatus (Bath). J Bacterial. 178, 1018-1029.
-
(1996)
J Bacterial
, vol.178
, pp. 1018-1029
-
-
Zahn, J.A.1
Dispirito, A.A.2
-
211
-
-
0036853719
-
Effect of nickel deprivation on methanol degradation in a methanogenic granular sludge bioreactor
-
Zandvoort, M. H., Osuna, M. B., Geerts, R., Lettinga, G., and Lens, P. N. (2002). Effect of nickel deprivation on methanol degradation in a methanogenic granular sludge bioreactor. J Ind. Microbiol. Biotechnol. 29, 268-274.
-
(2002)
J Ind. Microbiol. Biotechnol.
, vol.29
, pp. 268-274
-
-
Zandvoort, M.H.1
Osuna, M.B.2
Geerts, R.3
Lettinga, G.4
Lens, P.N.5
-
212
-
-
33746087565
-
Granular sludge in full-scale anaerobic bioreactors: trace element content and deficiencies
-
Zandvoort, M. H., van Hullebusch, E. D., Gieteling, J., and Lens, P. N. L. (2006). Granular sludge in full-scale anaerobic bioreactors: trace element content and deficiencies. Enzyme Microb. Technol. 39, 337-346.
-
(2006)
Enzyme Microb. Technol.
, vol.39
, pp. 337-346
-
-
Zandvoort, M.H.1
van Hullebusch, E.D.2
Gieteling, J.3
Lens, P.N.L.4
-
213
-
-
0023116857
-
Growth promoting effect of tungsten on methanogens and incorporation of tungsten-185 into cells
-
Zellner, G., and Winter, J. (1987). Growth promoting effect of tungsten on methanogens and incorporation of tungsten-185 into cells. FEMS Microbiol. Ecol 40, 81-87.
-
(1987)
FEMS Microbiol. Ecol
, vol.40
, pp. 81-87
-
-
Zellner, G.1
Winter, J.2
-
214
-
-
32644453530
-
Biogeochemical signatures through time as inferred from whole microbial genomes
-
Zerkle, A. L., House, C. H., and Brantley, S. L. (2005). Biogeochemical signatures through time as inferred from whole microbial genomes. Am. J. Sci. 305,467-502.
-
(2005)
Am. J. Sci.
, vol.305
, pp. 467-502
-
-
Zerkle, A.L.1
House, C.H.2
Brantley, S.L.3
-
215
-
-
64849111600
-
Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization
-
doi:10.1186/1471-2164-10-78
-
Zhang, Y., Rodionov, D. A., Gelfand, M. S., and Gladyshev, V. N. (2009). Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization. BMC Genomics 10,1-26. doi:10.1186/1471-2164-10-78
-
(2009)
BMC Genomics
, vol.10
, pp. 1-26
-
-
Zhang, Y.1
Rodionov, D.A.2
Gelfand, M.S.3
Gladyshev, V.N.4
-
216
-
-
0026612820
-
Informing methylenetetrahydromethanopterin dehydrogenase, a novel type of hydrogenase without iron-sulfur clusters in methanogenic archaea
-
Zirngibl, C, van Dongen, W., Schworer, B., Biinau, R., Richter, M., Klein, A., and Thauer, R. K. (1992). Informing methylenetetrahydromethanopterin dehydrogenase, a novel type of hydrogenase without iron-sulfur clusters in methanogenic archaea. Eur.]. Biochem. 208, 511-520.
-
(1992)
Eur. J. Biochem.
, vol.208
, pp. 511-520
-
-
Zirngibl, C.1
van Dongen, W.2
Schworer, B.3
Biinau, R.4
Richter, M.5
Klein, A.6
Thauer, R.K.7
-
217
-
-
10444275550
-
Nitric oxide reductases of prokaryotes with emphasis on the respiratory, hemecopper oxidase type
-
Zumft, W. G. (2005). Nitric oxide reductases of prokaryotes with emphasis on the respiratory, hemecopper oxidase type. J Inorg. Biochem. 99, 194-215.
-
(2005)
J Inorg. Biochem.
, vol.99
, pp. 194-215
-
-
Zumft, W.G.1
|