메뉴 건너뛰기




Volumn 4, Issue 4, 2006, Pages 520-536

Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIA; CARBON; ACETYL COENZYME A CARBOXYLASE; AMMONIA MONOOXYGENASE; ARCHAEAL DNA; DRUG DERIVATIVE; HYDRACRYLIC ACID; ISOENZYME; LACTIC ACID; OXIDOREDUCTASE; SEA WATER;

EID: 33646260901     PISSN: 15457885     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.0040095     Document Type: Article
Times cited : (466)

References (77)
  • 1
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • USA
    • DeLong EF (1992) Archaea in coastal marine environments. Proc Natl Acad Sci USA 89: 5685-5689.
    • (1992) Proc Natl Acad Sci , vol.89 , pp. 5685-5689
    • DeLong, E.F.1
  • 2
    • 0035945618 scopus 로고    scopus 로고
    • Archaeal dominance in the mesopelagic zone of the Pacific Ocean
    • Karner MB, DeLong EF, Karl DM (2001) Archaeal dominance in the mesopelagic zone of the Pacific Ocean. Nature 409: 507-510.
    • (2001) Nature , vol.409 , pp. 507-510
    • Karner, M.B.1    DeLong, E.F.2    Karl, D.M.3
  • 3
    • 0026525546 scopus 로고
    • Novel major archaebacterial group from marine plankton
    • Fuhrman JA, McCallum K, Davis AA (1992) Novel major archaebacterial group from marine plankton. Nature 356: 148-149.
    • (1992) Nature , vol.356 , pp. 148-149
    • Fuhrman, J.A.1    McCallum, K.2    Davis, A.A.3
  • 4
    • 0030620440 scopus 로고    scopus 로고
    • Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel
    • Massana R, Murray AE, Preston CM, DeLong EF (1997) Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel. Appl Environ Microbiol 63: 50-56.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 50-56
    • Massana, R.1    Murray, A.E.2    Preston, C.M.3    DeLong, E.F.4
  • 5
    • 0031814110 scopus 로고    scopus 로고
    • Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Anvers Island, Antarctica
    • Murray AE, Preston CM, Massana R, Taylor LT, Blakis A, et al. (1998) Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Anvers Island, Antarctica. Appl Environ Microbiol 64: 2585-2595.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 2585-2595
    • Murray, A.E.1    Preston, C.M.2    Massana, R.3    Taylor, L.T.4    Blakis, A.5
  • 6
    • 15844365305 scopus 로고    scopus 로고
    • A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov
    • USA
    • Preston CM, Wu KY, Molinski TF, DeLong EF (1996) A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov. Proc Natl Acad Sci USA 93: 6241-6246.
    • (1996) Proc Natl Acad Sci , vol.93 , pp. 6241-6246
    • Preston, C.M.1    Wu, K.Y.2    Molinski, T.F.3    DeLong, E.F.4
  • 7
  • 12
    • 0034687586 scopus 로고    scopus 로고
    • Widespread occurrence of structurally diverse tetraether membrane lipids: Evidence for the ubiquitous presence of low-temperature relatives of hyperthermophiles
    • USA
    • Schouten S, Hopmans EC, Pancost RD, Damste JS (2000) Widespread occurrence of structurally diverse tetraether membrane lipids: Evidence for the ubiquitous presence of low-temperature relatives of hyperthermophiles. Proc Natl Acad Sci USA 97: 14421-14426.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 14421-14426
    • Schouten, S.1    Hopmans, E.C.2    Pancost, R.D.3    Damste, J.S.4
  • 14
    • 0034771071 scopus 로고    scopus 로고
    • Origins of lipid biomarkers in Santa Monica Basin surface sediment: A case study using compound-specific D14C analysis
    • Pearson A, McNichol AP, Benitez-Nelson BC, Hayes JM, Eglinton TI (2001) Origins of lipid biomarkers in Santa Monica Basin surface sediment: A case study using compound-specific D14C analysis. Geochim Cosmochim Acta 65: 3123-3137.
    • (2001) Geochim Cosmochim Acta , vol.65 , pp. 3123-3137
    • Pearson, A.1    McNichol, A.P.2    Benitez-Nelson, B.C.3    Hayes, J.M.4    Eglinton, T.I.5
  • 16
    • 18444408108 scopus 로고    scopus 로고
    • Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean
    • Herndl GJ, Reinthaler T, Teira E, van Aken H, Veth C, et al. (2005) Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean. Appl Environ Microbiol 71: 2303-2309.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 2303-2309
    • Herndl, G.J.1    Reinthaler, T.2    Teira, E.3    Van Aken, H.4    Veth, C.5
  • 17
    • 0030446844 scopus 로고    scopus 로고
    • Autotrophic carbon dioxide fixation in Acidianus brierleyi
    • Ishii M, Miyake T, Satoh T, Sugiyama H, Oshima Y, et al. (1996) Autotrophic carbon dioxide fixation in Acidianus brierleyi. Arch Microbiol 166: 368-371.
    • (1996) Arch Microbiol , vol.166 , pp. 368-371
    • Ishii, M.1    Miyake, T.2    Satoh, T.3    Sugiyama, H.4    Oshima, Y.5
  • 18
    • 0033057627 scopus 로고    scopus 로고
    • Presence of acetyl coenzyme A (CoA) carboxylase and propionyl-CoA carboxylase in autotrophic Crenarchaeota and indication for operation of a 3-hydroxypropionate cycle in autotrophic carbon fixation
    • Menendez C, Bauer Z, Huber H, Gad'on N, Stetter KO, et al. (1999) Presence of acetyl coenzyme A (CoA) carboxylase and propionyl-CoA carboxylase in autotrophic Crenarchaeota and indication for operation of a 3-hydroxypropionate cycle in autotrophic carbon fixation. J Bacteriol 181: 1088-1098.
    • (1999) J Bacteriol , vol.181 , pp. 1088-1098
    • Menendez, C.1    Bauer, Z.2    Huber, H.3    Gad'on, N.4    Stetter, K.O.5
  • 20
    • 0038313100 scopus 로고    scopus 로고
    • Autotrophic CO2 fixation pathways in archaea (Crenarchaeota)
    • Hugler M, Huber H, Stetter KO, Fuchs G (2003) Autotrophic CO2 fixation pathways in archaea (Crenarchaeota). Arch Microbiol 179: 160-173.
    • (2003) Arch Microbiol , vol.179 , pp. 160-173
    • Hugler, M.1    Huber, H.2    Stetter, K.O.3    Fuchs, G.4
  • 21
    • 0037294946 scopus 로고    scopus 로고
    • Characterization of acetyl-CoA/propionyl-CoA carboxylase in Metallosphaera sedula. Carboxylating enzyme in the 3-hydroxypropionate cycle for autotrophic carbon fixation
    • Hugler M, Krieger RS, Jahn M, Fuchs G (2003) Characterization of acetyl-CoA/propionyl-CoA carboxylase in Metallosphaera sedula. Carboxylating enzyme in the 3-hydroxypropionate cycle for autotrophic carbon fixation. Eur J Biochem 270: 736-744.
    • (2003) Eur J Biochem , vol.270 , pp. 736-744
    • Hugler, M.1    Krieger, R.S.2    Jahn, M.3    Fuchs, G.4
  • 22
    • 0024722456 scopus 로고
    • 13C-NMR study of autotrophic CO2 fixation in Thermoproteus neutrophilus
    • Schafer S, Gotz M, Eisenreich W, Bacher A, Fuchs G (1989) 13C-NMR study of autotrophic CO2 fixation in Thermoproteus neutrophilus. Eur J Biochem 184: 151-156.
    • (1989) Eur J Biochem , vol.184 , pp. 151-156
    • Schafer, S.1    Gotz, M.2    Eisenreich, W.3    Bacher, A.4    Fuchs, G.5
  • 23
    • 0024854674 scopus 로고
    • 13C-NMR study of acetate assimilation in Thermoproteus neutrophilus
    • Schafer S, Paalme T, Vilu R, Fuchs G (1989) 13C-NMR study of acetate assimilation in Thermoproteus neutrophilus. Eur J Biochem 186: 695-700.
    • (1989) Eur J Biochem , vol.186 , pp. 695-700
    • Schafer, S.1    Paalme, T.2    Vilu, R.3    Fuchs, G.4
  • 24
    • 0026611716 scopus 로고
    • 13C-NMR study of autotrophic CO2 fixation pathways in the sulfur-reducing Archaebacterium Thermoproteus neutrophilus and in the phototrophic Eubacterium Chloroflexus aurantiacus
    • Strauss G, Eisenreich W, Bacher A, Fuchs G (1992) 13C-NMR study of autotrophic CO2 fixation pathways in the sulfur-reducing Archaebacterium Thermoproteus neutrophilus and in the phototrophic Eubacterium Chloroflexus aurantiacus. Eur J Biochem 205: 853-866.
    • (1992) Eur J Biochem , vol.205 , pp. 853-866
    • Strauss, G.1    Eisenreich, W.2    Bacher, A.3    Fuchs, G.4
  • 25
    • 0003950883 scopus 로고    scopus 로고
    • [thesis]. Cambridge and Woods Hole (Massachusetts): Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    • Pearson A (2000) Biogeochemical applications of compound-specific radiocarbon analysis [thesis]. Cambridge and Woods Hole (Massachusetts): Massachusetts Institute of Technology and Woods Hole Oceanographic Institution. 348 p.
    • (2000) Biogeochemical Applications of Compound-specific Radiocarbon Analysis
    • Pearson, A.1
  • 27
    • 26844541457 scopus 로고    scopus 로고
    • Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
    • USA
    • Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci USA 102: 14683-14688.
    • (2005) Proc Natl Acad Sci , vol.102 , pp. 14683-14688
    • Francis, C.A.1    Roberts, K.J.2    Beman, J.M.3    Santoro, A.E.4    Oakley, B.B.5
  • 30
    • 0030865449 scopus 로고    scopus 로고
    • Characterization of a DNA polymerase from the uncultivated psychrophilic archaeon Cenarchaeum symbiosum
    • Schleper C, Swanson RV, Mathur EJ, DeLong EF (1997) Characterization of a DNA polymerase from the uncultivated psychrophilic archaeon Cenarchaeum symbiosum. J Bacteriol 179: 7803-7811.
    • (1997) J Bacteriol , vol.179 , pp. 7803-7811
    • Schleper, C.1    Swanson, R.V.2    Mathur, E.J.3    DeLong, E.F.4
  • 31
    • 0031680049 scopus 로고    scopus 로고
    • Genomic analysis reveals chromosomal variation in natural populations of the uncultured psychrophilic archaeon Cenarchaeum symbiosum
    • Schleper C, DeLong EF, Preston CM, Feldman RA, Wu KY, et al. (1998) Genomic analysis reveals chromosomal variation in natural populations of the uncultured psychrophilic archaeon Cenarchaeum symbiosum. J Bacteriol 180: 5003-5009.
    • (1998) J Bacteriol , vol.180 , pp. 5003-5009
    • Schleper, C.1    DeLong, E.F.2    Preston, C.M.3    Feldman, R.A.4    Wu, K.Y.5
  • 32
    • 0030023659 scopus 로고    scopus 로고
    • Characterization of uncultivated prokaryotes: Isolation and analysis of a 40-kilobase-pair genome fragment from a planktonic marine archaeon
    • Stein JL, Marsh TL, Wu KY, Shizuya H, DeLong EF (1996) Characterization of uncultivated prokaryotes: Isolation and analysis of a 40-kilobase-pair genome fragment from a planktonic marine archaeon. J Bacteriol 178: 591-599.
    • (1996) J Bacteriol , vol.178 , pp. 591-599
    • Stein, J.L.1    Marsh, T.L.2    Wu, K.Y.3    Shizuya, H.4    DeLong, E.F.5
  • 33
    • 0036135990 scopus 로고    scopus 로고
    • Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces
    • Beja O, Koonin EV, Aravind L, Taylor LT, Seitz H, et al. (2002) Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces. Appl Environ Microbiol 68: 335-345.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 335-345
    • Beja, O.1    Koonin, E.V.2    Aravind, L.3    Taylor, L.T.4    Seitz, H.5
  • 35
    • 0022526191 scopus 로고
    • The autotrophic pathway of acetate synthesis in acetogenic bacteria
    • Ljungdahl LG (1986) The autotrophic pathway of acetate synthesis in acetogenic bacteria. Annu Rev Microbiol 40: 415-450.
    • (1986) Annu Rev Microbiol , vol.40 , pp. 415-450
    • Ljungdahl, L.G.1
  • 36
    • 0013901576 scopus 로고
    • A new ferredoxin-dependent carbon reduction cycle in a photosynthetic bacterium
    • USA
    • Evans MC, Buchanan BB, Arnon DI (1966) A new ferredoxin-dependent carbon reduction cycle in a photosynthetic bacterium. Proc Natl Acad Sci USA 55: 928-934.
    • (1966) Proc Natl Acad Sci , vol.55 , pp. 928-934
    • Evans, M.C.1    Buchanan, B.B.2    Arnon, D.I.3
  • 37
    • 0034975486 scopus 로고    scopus 로고
    • Autotrophic CO(2) fixation by Chloroflexus aurantiacus: Study of glyoxylate formation and assimilation via the 3-hydroxypropionate cycle
    • Herter S, Farfsing J, Gad'On N, Rieder C, Eisenreich W, et al. (2001) Autotrophic CO(2) fixation by Chloroflexus aurantiacus: Study of glyoxylate formation and assimilation via the 3-hydroxypropionate cycle. J Bacteriol 183: 4305-4316.
    • (2001) J Bacteriol , vol.183 , pp. 4305-4316
    • Herter, S.1    Farfsing, J.2    Gad'On, N.3    Rieder, C.4    Eisenreich, W.5
  • 38
    • 0031752797 scopus 로고    scopus 로고
    • Something from almost nothing: Carbon dioxide fixation in chemoautotrophs
    • Shively JM, van Keulen G, Meijer WG (1998) Something from almost nothing: Carbon dioxide fixation in chemoautotrophs. Annu Rev Microbiol 52: 191-230.
    • (1998) Annu Rev Microbiol , vol.52 , pp. 191-230
    • Shively, J.M.1    Van Keulen, G.2    Meijer, W.G.3
  • 39
    • 0026052565 scopus 로고
    • Enzymology of the acetyl-CoA pathway of CO2 fixation
    • Ragsdale SW (1991) Enzymology of the acetyl-CoA pathway of CO2 fixation. Crit Rev Biochem Mol Biol 26: 261-300.
    • (1991) Crit Rev Biochem Mol Biol , vol.26 , pp. 261-300
    • Ragsdale, S.W.1
  • 40
    • 0027303801 scopus 로고
    • Enzymes of the reductive citric acid cycle in the autotrophic eubacterium Aquifex pyrophilus and in the archaebacterium Thermoproteus neutrophilus
    • Beh M, Strauss G, Huber R, Stetter KO, Fuchs G (1993) Enzymes of the reductive citric acid cycle in the autotrophic eubacterium Aquifex pyrophilus and in the archaebacterium Thermoproteus neutrophilus. Arch Microbiol 160: 306-311.
    • (1993) Arch Microbiol , vol.160 , pp. 306-311
    • Beh, M.1    Strauss, G.2    Huber, R.3    Stetter, K.O.4    Fuchs, G.5
  • 41
    • 0036227596 scopus 로고    scopus 로고
    • Malonyl-coenzyme A reductase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO(2) fixation
    • Hugler M, Menendez C, Schagger H, Fuchs G (2002) Malonyl-coenzyme A reductase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO(2) fixation. J Bacteriol 184: 2404-2410.
    • (2002) J Bacteriol , vol.184 , pp. 2404-2410
    • Hugler, M.1    Menendez, C.2    Schagger, H.3    Fuchs, G.4
  • 42
    • 0037023756 scopus 로고    scopus 로고
    • Propionyl-coenzyme A synthase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO2 fixation
    • Alber BE, Fuchs G (2002) Propionyl-coenzyme A synthase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO2 fixation. J Biol Chem 277: 12137-12143.
    • (2002) J Biol Chem , vol.277 , pp. 12137-12143
    • Alber, B.E.1    Fuchs, G.2
  • 43
    • 0027293771 scopus 로고
    • Retrobiosynthetic analysis of carbon fixation in the phototrophic eubacterium Chloroflexus aurantiacus
    • Eisenreich W, Strauss G, Werz U, Fuchs G, Bacher A (1993) Retrobiosynthetic analysis of carbon fixation in the phototrophic eubacterium Chloroflexus aurantiacus. Eur J Biochem 215: 619-632.
    • (1993) Eur J Biochem , vol.215 , pp. 619-632
    • Eisenreich, W.1    Strauss, G.2    Werz, U.3    Fuchs, G.4    Bacher, A.5
  • 46
    • 0018951984 scopus 로고
    • ATP-dependent citrate lyase in the green phototrophic bacterium, Chlorobium limicola
    • Sintsov NV, Ivanovskii RN, Kondrat'eva EN (1980) ATP-dependent citrate lyase in the green phototrophic bacterium, Chlorobium limicola. Mikrobiologiia 49: 514-516.
    • (1980) Mikrobiologiia , vol.49 , pp. 514-516
    • Sintsov, N.V.1    Ivanovskii, R.N.2    Kondrat'eva, E.N.3
  • 47
    • 0020395367 scopus 로고
    • Characterization of ATP citrate lyase from Chlorobium limicola
    • Antranikian G, Herzberg C, Gottschalk G (1982) Characterization of ATP citrate lyase from Chlorobium limicola. J Bacteriol 152: 1284-1287.
    • (1982) J Bacteriol , vol.152 , pp. 1284-1287
    • Antranikian, G.1    Herzberg, C.2    Gottschalk, G.3
  • 48
    • 0034836201 scopus 로고    scopus 로고
    • ATP-citrate lyase from the green sulfur bacterium Chlorobium limicola is a heteromeric enzyme composed of two distinct gene products
    • Kanao T, Fukui T, Atomi H, Imanaka T (2001) ATP-citrate lyase from the green sulfur bacterium Chlorobium limicola is a heteromeric enzyme composed of two distinct gene products. Eur J Biochem 268: 1670-1678.
    • (2001) Eur J Biochem , vol.268 , pp. 1670-1678
    • Kanao, T.1    Fukui, T.2    Atomi, H.3    Imanaka, T.4
  • 49
    • 2442555043 scopus 로고    scopus 로고
    • A novel enzyme, citryl-CoA lyase, catalysing the second step of the citrate cleavage reaction in Hydrogenobacter thermophilus TK-6
    • Aoshima M, Ishii M, Igarashi Y (2004) A novel enzyme, citryl-CoA lyase, catalysing the second step of the citrate cleavage reaction in Hydrogenobacter thermophilus TK-6. Mol Microbiol 52: 763-770.
    • (2004) Mol Microbiol , vol.52 , pp. 763-770
    • Aoshima, M.1    Ishii, M.2    Igarashi, Y.3
  • 50
    • 2442456717 scopus 로고    scopus 로고
    • A novel enzyme, citryl-CoA synthetase, catalysing the first step of the citrate cleavage reaction in Hydrogenobacter thermophilus TK-6
    • Aoshima M, Ishii M, Igarashi Y (2004) A novel enzyme, citryl-CoA synthetase, catalysing the first step of the citrate cleavage reaction in Hydrogenobacter thermophilus TK-6. Mol Microbiol 52: 751-761.
    • (2004) Mol Microbiol , vol.52 , pp. 751-761
    • Aoshima, M.1    Ishii, M.2    Igarashi, Y.3
  • 51
    • 0034666137 scopus 로고    scopus 로고
    • The role of pyruvate ferredoxin oxidoreductase in pyruvate synthesis during autotrophic growth by the Wood-Ljungdahl pathway
    • Furdui C, Ragsdale SW (2000) The role of pyruvate ferredoxin oxidoreductase in pyruvate synthesis during autotrophic growth by the Wood-Ljungdahl pathway. J Biol Chem 275: 28494-28499.
    • (2000) J Biol Chem , vol.275 , pp. 28494-28499
    • Furdui, C.1    Ragsdale, S.W.2
  • 52
    • 0016434642 scopus 로고
    • Citrate lyase from Streptococcus diacetilactis. Association with its acetylating enzyme
    • Kummel A, Behrens G, Gottschalk G (1975) Citrate lyase from Streptococcus diacetilactis. Association with its acetylating enzyme. Arch Microbiol 102: 111-116.
    • (1975) Arch Microbiol , vol.102 , pp. 111-116
    • Kummel, A.1    Behrens, G.2    Gottschalk, G.3
  • 53
    • 0031911750 scopus 로고    scopus 로고
    • Purification of Leuconostoc mesenteroides citrate lyase and cloning and characterization of the citCDEFG gene cluster
    • Bekal S, Van Beeumen J, Samyn B, Garmyn D, Henini S, et al. (1998) Purification of Leuconostoc mesenteroides citrate lyase and cloning and characterization of the citCDEFG gene cluster. J Bacteriol 180: 647-654.
    • (1998) J Bacteriol , vol.180 , pp. 647-654
    • Bekal, S.1    Van Beeumen, J.2    Samyn, B.3    Garmyn, D.4    Henini, S.5
  • 54
    • 12144290887 scopus 로고    scopus 로고
    • Reconstruction of the central carbohydrate metabolism of Thermoproteus tenax by use of genomic and biochemical data
    • Siebers B, Tjaden B, Michalke K, Dorr C, Ahmed H, et al. (2004) Reconstruction of the central carbohydrate metabolism of Thermoproteus tenax by use of genomic and biochemical data. J Bacteriol 186: 2179-2194.
    • (2004) J Bacteriol , vol.186 , pp. 2179-2194
    • Siebers, B.1    Tjaden, B.2    Michalke, K.3    Dorr, C.4    Ahmed, H.5
  • 55
    • 0036038187 scopus 로고    scopus 로고
    • Molecular biology and biochemistry of ammonia oxidation by Nitrosomonas europaea
    • Arp DJ, Sayavedra-Soto LA, Hommes NG (2002) Molecular biology and biochemistry of ammonia oxidation by Nitrosomonas europaea. Arch Microbiol 178: 250-255.
    • (2002) Arch Microbiol , vol.178 , pp. 250-255
    • Arp, D.J.1    Sayavedra-Soto, L.A.2    Hommes, N.G.3
  • 56
    • 0028791540 scopus 로고
    • Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related
    • Holmes AJ, Costello A, Lidstrom ME, Murrell JC (1995) Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related. FEMS Microbiol Lett 132: 203-208.
    • (1995) FEMS Microbiol Lett , vol.132 , pp. 203-208
    • Holmes, A.J.1    Costello, A.2    Lidstrom, M.E.3    Murrell, J.C.4
  • 58
    • 0036042189 scopus 로고    scopus 로고
    • Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria
    • Vorholt JA (2002) Cofactor-dependent pathways of formaldehyde oxidation in methylotrophic bacteria. Arch Microbiol 178: 239-249.
    • (2002) Arch Microbiol , vol.178 , pp. 239-249
    • Vorholt, J.A.1
  • 59
    • 9144223171 scopus 로고    scopus 로고
    • Nitrate reduction and the nitrogen cycle in archaea
    • Cabello P, Roldan MD, Moreno-Vivian C (2004) Nitrate reduction and the nitrogen cycle in archaea. Microbiology 150: 3527-3546.
    • (2004) Microbiology , vol.150 , pp. 3527-3546
    • Cabello, P.1    Roldan, M.D.2    Moreno-Vivian, C.3
  • 61
    • 0036868094 scopus 로고    scopus 로고
    • The archaeal respiratory supercomplex SoxM from S. acidocaldarius combines features of quinole and cytochrome c oxidases
    • Komorowski L, Verheyen W, Schafer G (2002) The archaeal respiratory supercomplex SoxM from S. acidocaldarius combines features of quinole and cytochrome c oxidases. Biol Chem 383: 1791-1799.
    • (2002) Biol Chem , vol.383 , pp. 1791-1799
    • Komorowski, L.1    Verheyen, W.2    Schafer, G.3
  • 63
    • 0035408582 scopus 로고    scopus 로고
    • Autotrophic ammonia oxidation at low pH through urea hydrolysis
    • Burton SA, Prosser JI (2001) Autotrophic ammonia oxidation at low pH through urea hydrolysis. Appl Environ Microbiol 67: 2952-2957.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2952-2957
    • Burton, S.A.1    Prosser, J.I.2
  • 64
    • 0030941542 scopus 로고    scopus 로고
    • Anaerobic ammonia oxidation with nitrogen dioxide by Nitrosomonas eutropha
    • Schmidt II, Bock E (1997) Anaerobic ammonia oxidation with nitrogen dioxide by Nitrosomonas eutropha. Arch Microbiol 167: 106-111.
    • (1997) Arch Microbiol , vol.167 , pp. 106-111
    • Schmidt, I.I.1    Bock, E.2
  • 65
    • 0036226260 scopus 로고    scopus 로고
    • Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite
    • Beaumont HJ, Hommes NG, Sayavedra-Soto LA, Arp DJ, Arciero DM, et al. (2002) Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite. J Bacteriol 184: 2557-2560.
    • (2002) J Bacteriol , vol.184 , pp. 2557-2560
    • Beaumont, H.J.1    Hommes, N.G.2    Sayavedra-Soto, L.A.3    Arp, D.J.4    Arciero, D.M.5
  • 67
    • 0034554741 scopus 로고    scopus 로고
    • Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage
    • Beja O, Suzuki MT, Koonin EV, Aravind L, Hadd A, et al. (2000) Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage. Environ Microbiol 2: 516-529.
    • (2000) Environ Microbiol , vol.2 , pp. 516-529
    • Beja, O.1    Suzuki, M.T.2    Koonin, E.V.3    Aravind, L.4    Hadd, A.5
  • 69
    • 0028594902 scopus 로고
    • High abundance of Archaea in Antarctic marine picoplankton
    • DeLong EF, Wu KY, Prezelin BB, Jovine RV (1994) High abundance of Archaea in Antarctic marine picoplankton. Nature 371: 695-697.
    • (1994) Nature , vol.371 , pp. 695-697
    • DeLong, E.F.1    Wu, K.Y.2    Prezelin, B.B.3    Jovine, R.V.4
  • 70
    • 0034114417 scopus 로고    scopus 로고
    • A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces
    • Massana R, DeLong EF, Pedros-Alio C (2000) A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces. Appl Environ Microbiol 66: 1777-1787.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 1777-1787
    • Massana, R.1    DeLong, E.F.2    Pedros-Alio, C.3
  • 71
    • 0026594245 scopus 로고
    • Stable propagation of cosmid sized human DNA inserts in an F factor based vector
    • Kim UJ, Shizuya H, de Jong PJ, Birren B, Simon MI (1992) Stable propagation of cosmid sized human DNA inserts in an F factor based vector. Nucleic Acids Res 20: 1083-1085.
    • (1992) Nucleic Acids Res , vol.20 , pp. 1083-1085
    • Kim, U.J.1    Shizuya, H.2    De Jong, P.J.3    Birren, B.4    Simon, M.I.5
  • 72
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing B, Green P (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8: 186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 73
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing B, Hillier L, Wendl MC, Green P (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8: 175-185.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 74
    • 12244263975 scopus 로고    scopus 로고
    • Phylogenetic screening of ribosomal RNA gene-containing clones in Bacterial Artificial Chromosome (BAC) libraries from different depths in Monterey Bay
    • Suzuki MT, Preston CM, Beja O, de la Torre JR, Steward GF, et al. (2004) Phylogenetic screening of ribosomal RNA gene-containing clones in Bacterial Artificial Chromosome (BAC) libraries from different depths in Monterey Bay. Microb Ecol 48: 473-488.
    • (2004) Microb Ecol , vol.48 , pp. 473-488
    • Suzuki, M.T.1    Preston, C.M.2    Beja, O.3    De La Torre, J.R.4    Steward, G.F.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.