-
1
-
-
69349103147
-
Function and regulation of macroautophagy in plants
-
Bassham DC (2009) Function and regulation of macroautophagy in plants. Biochim Biophys Acta 1793: 1397-1403.
-
(2009)
Biochim Biophys Acta
, vol.1793
, pp. 1397-1403
-
-
Bassham, D.C.1
-
2
-
-
0032504021
-
Structure determination of the small ubiquitin-related modifier SUMO-1
-
Bayer P, Arndt A, Metzger S, Mahajan R, Melchior F, Jaenicke R, Becker J (1998) Structure determination of the small ubiquitin-related modifier SUMO-1. J Mol Biol 280: 275-286.
-
(1998)
J Mol Biol
, vol.280
, pp. 275-286
-
-
Bayer, P.1
Arndt, A.2
Metzger, S.3
Mahajan, R.4
Melchior, F.5
Jaenicke, R.6
Becker, J.7
-
4
-
-
77955485244
-
Affinity purification of the Arabidopsis 26 S proteasome reveals a diverse array of plant proteolytic complexes
-
Book AJ, Gladman NP, Lee SS, Scalf M, Smith LM, Vierstra RD (2010) Affinity purification of the Arabidopsis 26 S proteasome reveals a diverse array of plant proteolytic complexes. J Biol Chem 285: 25554-25569.
-
(2010)
J Biol Chem
, pp. 25554
-
-
Book, A.J.1
Gladman, N.P.2
Lee, S.S.3
Scalf, M.4
Smith, L.M.5
Vierstra, R.D.6
-
5
-
-
78549285675
-
Darwin KH (2010) "Depupylation" of prokaryotic ubiquitin-like protein from mycobacterial proteasome substrates
-
Burns KE, Cerda-Maira FA, Wang T, Li H, Bishai WR, Darwin KH (2010) "Depupylation" of prokaryotic ubiquitin-like protein from mycobacterial proteasome substrates. Mol Cell 39: 821-827.
-
Mol Cell
, vol.39
, pp. 821-827
-
-
Burns, K.E.1
Cerda-Maira, F.A.2
Wang, T.3
Li, H.4
Bishai, W.R.5
-
6
-
-
84859229690
-
The natural history of ubiquitin and ubiquitin-related domains
-
Burroughs AM, Iyer LM, Aravind L (2012) The natural history of ubiquitin and ubiquitin-related domains. Front Biosci 17: 1433-1460.
-
(2012)
Front Biosci
, vol.17
, pp. 1433-1460
-
-
Burroughs, A.M.1
Iyer, L.M.2
Aravind, L.3
-
7
-
-
0028836104
-
Structure and evolution of genes encoding polyubiquitin and ubiquitin-like proteins in Arabidopsis thaliana ecotype Columbia
-
Callis J, Carpenter T, Sun CW, Vierstra RD (1995) Structure and evolution of genes encoding polyubiquitin and ubiquitin-like proteins in Arabidopsis thaliana ecotype Columbia. Genetics 139: 921-939.
-
(1995)
Genetics
, vol.139
, pp. 921-939
-
-
Callis, J.1
Carpenter, T.2
Sun, C.W.3
Vierstra, R.D.4
-
8
-
-
0025370073
-
Ubiquitin extension proteins of Arabidopsis thaliana: Structure, localization, and expression of their promoters in transgenic tobacco
-
Callis J, Raasch JA, Vierstra RD (1990) Ubiquitin extension proteins of Arabidopsis thaliana: structure, localization, and expression of their promoters in transgenic tobacco. J Biol Chem 265: 12486-12493.
-
(1990)
J Biol Chem
, vol.265
, pp. 12486-12493
-
-
Callis, J.1
Raasch, J.A.2
Vierstra, R.D.3
-
9
-
-
77950956398
-
ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A and ATG12B loci
-
Chung T, Phillips AR, Vierstra RD (2010) ATG8 lipidation and ATG8-mediated autophagy in Arabidopsis require ATG12 expressed from the differentially controlled ATG12A and ATG12B loci. Plant J 62: 483-493.
-
(2010)
Plant J
, vol.62
, pp. 483-493
-
-
Chung, T.1
Phillips, A.R.2
Vierstra, R.D.3
-
10
-
-
58449118073
-
The ATG autophagic conjugation system in maize: ATG transcripts and abundance of the ATG8-lipid adduct are regulated by development and nutrient availability
-
Chung T, Suttangkakul A, Vierstra RD (2009) The ATG autophagic conjugation system in maize: ATG transcripts and abundance of the ATG8-lipid adduct are regulated by development and nutrient availability. Plant Physiol 149: 220-234.
-
(2009)
Plant Physiol
, vol.149
, pp. 220-234
-
-
Chung, T.1
Suttangkakul, A.2
Vierstra, R.D.3
-
12
-
-
57749100154
-
Small ubiquitin-like modifier proteases OVERLY TOLERANT TO SALT1 and -2 regulate salt stress responses in Arabidopsis
-
Conti L, Price G, O'Donnell E, Schwessinger B, Dominy P, Sadanandom A (2008) Small ubiquitin-like modifier proteases OVERLY TOLERANT TO SALT1 and -2 regulate salt stress responses in Arabidopsis. Plant Cell 20: 2894-2908.
-
(2008)
Plant Cell
, vol.20
, pp. 2894-2908
-
-
Conti, L.1
Price, G.2
O'Donnell, E.3
Schwessinger, B.4
Dominy, P.5
Sadanandom, A.6
-
13
-
-
61649110496
-
Protein isoprenylation: The fat of the matter
-
Crowell DN, Huizinga DH (2009) Protein isoprenylation: the fat of the matter. Trends Plant Sci 14: 163-170.
-
(2009)
Trends Plant Sci
, vol.14
, pp. 163-170
-
-
Crowell, D.N.1
Huizinga, D.H.2
-
14
-
-
14544269435
-
Genetic and chemical analyses of the action mechanisms of sirtinol in Arabidopsis
-
Dai X, Hayashi K, Nozaki H, Cheng Y, Zhao Y (2005) Genetic and chemical analyses of the action mechanisms of sirtinol in Arabidopsis. Proc Natl Acad Sci USA 102: 3129-3134.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 3129-3134
-
-
Dai, X.1
Hayashi, K.2
Nozaki, H.3
Cheng, Y.4
Zhao, Y.5
-
15
-
-
0036009784
-
AXR1-ECR1-dependent conjugation of RUB1 to the Arabidopsis cullin AtCUL1 is required for auxin response
-
del Pozo JC, Dharmasiri S, Hellmann H, Walker L, Gray WM, Estelle M (2002) AXR1-ECR1-dependent conjugation of RUB1 to the Arabidopsis cullin AtCUL1 is required for auxin response. Plant Cell 14: 421-433.
-
(2002)
Plant Cell
, vol.14
, pp. 421-433
-
-
del Pozo, J.C.1
Dharmasiri, S.2
Hellmann, H.3
Walker, L.4
Gray, W.M.5
Estelle, M.6
-
16
-
-
0033592946
-
The Arabidopsis cullin AtCUL1 is modified by the ubiquitin-related protein RUB1
-
del Pozo JC, Estelle M (1999) The Arabidopsis cullin AtCUL1 is modified by the ubiquitin-related protein RUB1. Proc Natl Acad Sci USA 96: 15342-15347.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 15342-15347
-
-
del Pozo, J.C.1
Estelle, M.2
-
17
-
-
0032135131
-
SUMO-1 modification of IkappaBalpha inhibits NF-kappaB activation
-
Desterro JM, Rodriguez MS, Hay RT (1998) SUMO-1 modification of IkappaBalpha inhibits NF-kappaB activation. Mol Cell 2: 233-239.
-
(1998)
Mol Cell
, vol.2
, pp. 233-239
-
-
Desterro, J.M.1
Rodriguez, M.S.2
Hay, R.T.3
-
19
-
-
0037031843
-
The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana
-
Doelling JH, Walker JM, Friedman EM, Thompson AR, Vierstra RD (2002) The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana. J Biol Chem 277: 33105-33114.
-
(2002)
J Biol Chem
, vol.277
, pp. 33105-33114
-
-
Doelling, J.H.1
Walker, J.M.2
Friedman, E.M.3
Thompson, A.R.4
Vierstra, R.D.5
-
20
-
-
0034795089
-
The ubiquitinspecific protease UBP14 is essential for early embryo development in Arabidopsis thaliana
-
Doelling JH, Yan N, Kurepa J, Walker J, Vierstra RD (2001) The ubiquitinspecific protease UBP14 is essential for early embryo development in Arabidopsis thaliana. Plant J 27: 393-405.
-
(2001)
Plant J
, vol.27
, pp. 393-405
-
-
Doelling, J.H.1
Yan, N.2
Kurepa, J.3
Walker, J.4
Vierstra, R.D.5
-
21
-
-
79955387574
-
Arabidopsis membrane-anchored ubiquitin-fold (MUB) proteins localize a specific subset of ubiquitin-conjugating (E2) enzymes to the plasma membrane
-
Dowil RT, Lu X, Saracco SA, Vierstra RD, Downes BP (2011) Arabidopsis membrane-anchored ubiquitin-fold (MUB) proteins localize a specific subset of ubiquitin-conjugating (E2) enzymes to the plasma membrane. J Biol Chem 286: 14913-14921.
-
(2011)
J Biol Chem
, vol.286
, pp. 14913-14921
-
-
Dowil, R.T.1
Lu, X.2
Saracco, S.A.3
Vierstra, R.D.4
Downes, B.P.5
-
22
-
-
18044364830
-
Post-translational regulation in plants employing a diverse set of polypeptide tags
-
Downes B, Vierstra RD (2005) Post-translational regulation in plants employing a diverse set of polypeptide tags. Biochem Soc Trans 33: 393-399.
-
(2005)
Biochem Soc Trans
, vol.33
, pp. 393-399
-
-
Downes, B.1
Vierstra, R.D.2
-
23
-
-
33748742143
-
MUBs, a family of ubiquitin-fold proteins that are plasma membrane-anchored by prenylation
-
Downes BP, Saracco SA, Lee SS, Crowell DN, Vierstra RD (2006) MUBs, a family of ubiquitin-fold proteins that are plasma membrane-anchored by prenylation. J Biol Chem 281: 27145-27157.
-
(2006)
J Biol Chem
, vol.281
, pp. 27145-27157
-
-
Downes, B.P.1
Saracco, S.A.2
Lee, S.S.3
Crowell, D.N.4
Vierstra, R.D.5
-
24
-
-
0141567486
-
The HECT ubiquitin-protein ligase (UPL) family in Arabidopsis: UPL3 has a specific role in trichome development
-
Downes BP, Stupar RM, Gingerich DJ, Vierstra RD (2003) The HECT ubiquitin-protein ligase (UPL) family in Arabidopsis: UPL3 has a specific role in trichome development. Plant J 35: 729-742.
-
(2003)
Plant J
, vol.35
, pp. 729-742
-
-
Downes, B.P.1
Stupar, R.M.2
Gingerich, D.J.3
Vierstra, R.D.4
-
25
-
-
34250897234
-
Ubiquitin, hormones and biotic stress in plants
-
Dreher K, Callis J (2007) Ubiquitin, hormones and biotic stress in plants. Ann Bot (Lond) 99: 787-822.
-
(2007)
Ann Bot (Lond)
, vol.99
, pp. 787-822
-
-
Dreher, K.1
Callis, J.2
-
26
-
-
78049234670
-
Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes
-
Elrouby N, Coupland G (2010) Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Proc Natl Acad Sci USA 107: 17415-17420.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 17415-17420
-
-
Elrouby, N.1
Coupland, G.2
-
27
-
-
77950363988
-
The RAD23 family provides an essential connection between the 26S proteasome and ubiquitylated proteins in Arabidopsis
-
Farmer LM, Book AJ, Lee KH, Lin YL, Fu H, Vierstra RD (2010) The RAD23 family provides an essential connection between the 26S proteasome and ubiquitylated proteins in Arabidopsis. Plant Cell 22: 124-142.
-
(2010)
Plant Cell
, vol.22
, pp. 124-142
-
-
Farmer, L.M.1
Book, A.J.2
Lee, K.H.3
Lin, Y.L.4
Fu, H.5
Vierstra, R.D.6
-
28
-
-
75149172775
-
Cross-species divergence of the major recognition pathways of ubiquitylated substrates for ubiquitin/26S proteasome-mediated proteolysis
-
Fatimababy AS, Lin YL, Usharani R, Radjacommare R, Wang HT, Tsai HL, Lee Y, Fu H (2010) Cross-species divergence of the major recognition pathways of ubiquitylated substrates for ubiquitin/26S proteasome-mediated proteolysis. FEBS J 277: 796-816.
-
(2010)
FEBS J
, vol.277
, pp. 796-816
-
-
Fatimababy, A.S.1
Lin, Y.L.2
Usharani, R.3
Radjacommare, R.4
Wang, H.T.5
Tsai, H.L.6
Lee, Y.7
Fu, H.8
-
29
-
-
3142732890
-
Arabidopsis CAND1, an unmodified CUL1-interacting protein, is involved in multiple developmental pathways controlled by ubiquitin/ proteasome-mediated protein degradation
-
Feng S, Shen Y, Sullivan JA, Rubio V, Xiong Y, Sun TP, Deng XW (2004) Arabidopsis CAND1, an unmodified CUL1-interacting protein, is involved in multiple developmental pathways controlled by ubiquitin/ proteasome-mediated protein degradation. Plant Cell 16: 1870-1882.
-
(2004)
Plant Cell
, vol.16
, pp. 1870-1882
-
-
Feng, S.1
Shen, Y.2
Sullivan, J.A.3
Rubio, V.4
Xiong, Y.5
Sun, T.P.6
Deng, X.W.7
-
30
-
-
23944491295
-
Arabidopsis has two redundant Cullin3 proteins that are essential for embryo development and that interact with RBX1 and BTB proteins to form multisubunit E3 ubiquitin ligase complexes in vivo
-
Figueroa P, Gusmaroli G, Serino G, Habashi J, Ma L, Shen Y, Feng S, Bostick M, Callis J, Hellmann H, et al (2005) Arabidopsis has two redundant Cullin3 proteins that are essential for embryo development and that interact with RBX1 and BTB proteins to form multisubunit E3 ubiquitin ligase complexes in vivo. Plant Cell 17: 1180-1195.
-
(2005)
Plant Cell
, vol.17
, pp. 1180-1195
-
-
Figueroa, P.1
Gusmaroli, G.2
Serino, G.3
Habashi, J.4
Ma, L.5
Shen, Y.6
Feng, S.7
Bostick, M.8
Callis, J.9
Hellmann, H.10
-
31
-
-
65649115267
-
Recognition and processing of ubiquitin-protein conjugates by the proteasome
-
Finley D (2009) Recognition and processing of ubiquitin-protein conjugates by the proteasome. Annu Rev Biochem 78: 477-513.
-
(2009)
Annu Rev Biochem
, vol.78
, pp. 477-513
-
-
Finley, D.1
-
32
-
-
0024593537
-
The tails of ubiquitin precursors are ribosomal proteins whose fusion to ubiquitin facilitates ribosome biogenesis
-
Finley D, Bartel B, Varshavsky A (1989) The tails of ubiquitin precursors are ribosomal proteins whose fusion to ubiquitin facilitates ribosome biogenesis. Nature 338: 394-401.
-
(1989)
Nature
, vol.338
, pp. 394-401
-
-
Finley, D.1
Bartel, B.2
Varshavsky, A.3
-
33
-
-
34250650034
-
The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth
-
Fleury D, Himanen K, Cnops G, Nelissen H, Boccardi TM, Maere S, Beemster GT, Neyt P, Anami S, Robles P, et al (2007) The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. Plant Cell 19: 417-432.
-
(2007)
Plant Cell
, vol.19
, pp. 417-432
-
-
Fleury, D.1
Himanen, K.2
Cnops, G.3
Nelissen, H.4
Boccardi, T.M.5
Maere, S.6
Beemster, G.T.7
Neyt, P.8
Anami, S.9
Robles, P.10
-
34
-
-
77955276666
-
Proteasomal recognition of ubiquitylated substrates
-
Fu H, Lin YL, Fatimababy AS (2010) Proteasomal recognition of ubiquitylated substrates. Trends Plant Sci 15: 375-386.
-
(2010)
Trends Plant Sci
, vol.15
, pp. 375-386
-
-
Fu, H.1
Lin, Y.L.2
Fatimababy, A.S.3
-
35
-
-
38349152489
-
In vitro reconstitution of plant Atg8 and Atg12 conjugation systems essential for autophagy
-
Fujioka Y, Noda NN, Fujii K, Yoshimoto K, Ohsumi Y, Inagaki F (2008) In vitro reconstitution of plant Atg8 and Atg12 conjugation systems essential for autophagy. J Biol Chem 283: 1921-1928.
-
(2008)
J Biol Chem
, vol.283
, pp. 1921-1928
-
-
Fujioka, Y.1
Noda, N.N.2
Fujii, K.3
Yoshimoto, K.4
Ohsumi, Y.5
Inagaki, F.6
-
36
-
-
0034677757
-
A protein conjugation system in yeast with homology to biosynthetic enzyme reaction of prokaryotes
-
Furukawa K, Mizushima N, Noda T, Ohsumi Y (2000) A protein conjugation system in yeast with homology to biosynthetic enzyme reaction of prokaryotes. J Biol Chem 275: 7462-7465.
-
(2000)
J Biol Chem
, vol.275
, pp. 7462-7465
-
-
Furukawa, K.1
Mizushima, N.2
Noda, T.3
Ohsumi, Y.4
-
37
-
-
0037143725
-
The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis
-
Gagne JM, Downes BP, Shiu SH, Durski AM, Vierstra RD (2002) The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. Proc Natl Acad Sci USA 99: 11519-11524.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 11519-11524
-
-
Gagne, J.M.1
Downes, B.P.2
Shiu, S.H.3
Durski, A.M.4
Vierstra, R.D.5
-
38
-
-
84861869979
-
Ubiquitin and proteasomes in transcription
-
Geng F, Wenzel S, Tansey WP (2012) Ubiquitin and proteasomes in transcription. Annu Rev Biochem 81: 177-201.
-
(2012)
Annu Rev Biochem
, vol.81
, pp. 177-201
-
-
Geng, F.1
Wenzel, S.2
Tansey, W.P.3
-
39
-
-
21444450086
-
Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis
-
Gingerich DJ, Gagne JM, Salter DW, Hellmann H, Estelle M, Ma LG, Vierstra RD (2005) Cullins 3a and 3b assemble with members of the broad complex/tramtrack/bric-a-brac (BTB) protein family to form essential ubiquitin-protein ligases (E3s) in Arabidopsis. J Biol Chem 280: 18810-18821.
-
(2005)
J Biol Chem
, vol.280
, pp. 18810-18821
-
-
Gingerich, D.J.1
Gagne, J.M.2
Salter, D.W.3
Hellmann, H.4
Estelle, M.5
Ma, L.G.6
Vierstra, R.D.7
-
40
-
-
0142216125
-
Attachment of the ubiquitinrelated protein Urm1p to the antioxidant protein Ahp1p
-
Goehring AS, Rivers DM, Sprague GF Jr (2003) Attachment of the ubiquitinrelated protein Urm1p to the antioxidant protein Ahp1p. Eukaryot Cell 2: 930-936.
-
(2003)
Eukaryot Cell
, vol.2
, pp. 930-936
-
-
Goehring, A.S.1
Rivers, D.M.2
Sprague Jr., G.F.3
-
41
-
-
79958071335
-
MLN4924 is an efficient inhibitor of NEDD8 conjugation in plants
-
Hakenjos JP, Richter R, Dohmann EM, Katsiarimpa A, Isono E, Schwechheimer C (2011) MLN4924 is an efficient inhibitor of NEDD8 conjugation in plants. Plant Physiol 156: 527-536.
-
(2011)
Plant Physiol
, vol.156
, pp. 527-536
-
-
Hakenjos, J.P.1
Richter, R.2
Dohmann, E.M.3
Katsiarimpa, A.4
Isono, E.5
Schwechheimer, C.6
-
42
-
-
0035983934
-
Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene
-
Hanaoka H, Noda T, Shirano Y, Kato T, Hayashi H, Shibata D, Tabata S, Ohsumi Y (2002) Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene. Plant Physiol 129: 1181-1193.
-
(2002)
Plant Physiol
, vol.129
, pp. 1181-1193
-
-
Hanaoka, H.1
Noda, T.2
Shirano, Y.3
Kato, T.4
Hayashi, H.5
Shibata, D.6
Tabata, S.7
Ohsumi, Y.8
-
43
-
-
33646064427
-
Structural complexity in ubiquitin recognition
-
Harper JW, Schulman BA (2006) Structural complexity in ubiquitin recognition. Cell 124: 1133-1136.
-
(2006)
Cell
, vol.124
, pp. 1133-1136
-
-
Harper, J.W.1
Schulman, B.A.2
-
45
-
-
79551615012
-
RNS2, a conserved member of the RNase T2 family, is necessary for ribosomal RNA decay in plants
-
Hillwig MS, Contento AL, Meyer A, Ebany D, Bassham DC, Macintosh GC (2011) RNS2, a conserved member of the RNase T2 family, is necessary for ribosomal RNA decay in plants. Proc Natl Acad Sci USA 108: 1093-1098.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 1093-1098
-
-
Hillwig, M.S.1
Contento, A.L.2
Meyer, A.3
Ebany, D.4
Bassham, D.C.5
Macintosh, G.C.6
-
46
-
-
63649113699
-
Origin and function of ubiquitin-like proteins
-
Hochstrasser M (2009) Origin and function of ubiquitin-like proteins. Nature 458: 422-429.
-
(2009)
Nature
, vol.458
, pp. 422-429
-
-
Hochstrasser, M.1
-
47
-
-
65549157489
-
Autophagic components contribute to hypersensitive cell death in Arabidopsis
-
Hofius D, Schultz-Larsen T, Joensen J, Tsitsigiannis DI, Petersen NH, Mattsson O, Jørgensen LB, Jones JD, Mundy J, Petersen M (2009) Autophagic components contribute to hypersensitive cell death in Arabidopsis. Cell 137: 773-783.
-
(2009)
Cell
, vol.137
, pp. 773-783
-
-
Hofius, D.1
Schultz-Larsen, T.2
Joensen, J.3
Tsitsigiannis, D.I.4
Petersen, N.H.5
Mattsson, O.6
Jørgensen, L.B.7
Jones, J.D.8
Mundy, J.9
Petersen, M.10
-
48
-
-
44949242505
-
Regulation of cullin RING ligases
-
Hotton SK, Callis J (2008) Regulation of cullin RING ligases. Annu Rev Plant Biol 59: 467-489.
-
(2008)
Annu Rev Plant Biol
, vol.59
, pp. 467-489
-
-
Hotton, S.K.1
Callis, J.2
-
49
-
-
79955642715
-
The cullin-RING ubiquitin-protein ligases
-
Hua Z, Vierstra RD (2011) The cullin-RING ubiquitin-protein ligases. Annu Rev Plant Biol 62: 299-334.
-
(2011)
Annu Rev Plant Biol
, vol.62
, pp. 299-334
-
-
Hua, Z.1
Vierstra, R.D.2
-
50
-
-
79551550373
-
Phylogenetic comparison of F-box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift
-
Hua Z, Zou C, Shiu SH, Vierstra RD (2011) Phylogenetic comparison of F-box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift. PLoS ONE 6: e16219.
-
(2011)
PLoS ONE
, vol.6
-
-
Hua, Z.1
Zou, C.2
Shiu, S.H.3
Vierstra, R.D.4
-
51
-
-
73849149089
-
Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii
-
Humbard MA, Miranda HV, Lim JM, Krause DJ, Pritz JR, Zhou G, Chen S, Wells L, Maupin-Furlow JA (2010) Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii. Nature 463: 54-60.
-
(2010)
Nature
, vol.463
, pp. 54-60
-
-
Humbard, M.A.1
Miranda, H.V.2
Lim, J.M.3
Krause, D.J.4
Pritz, J.R.5
Zhou, G.6
Chen, S.7
Wells, L.8
Maupin-Furlow, J.A.9
-
52
-
-
67650064603
-
Linear polyubiquitination: A new regulator of NF-kappaB activation
-
Iwai K, Tokunaga F (2009) Linear polyubiquitination: a new regulator of NF-kappaB activation. EMBO Rep 10: 706-713.
-
(2009)
EMBO Rep
, vol.10
, pp. 706-713
-
-
Iwai, K.1
Tokunaga, F.2
-
53
-
-
79551497252
-
Crystal structure of ubiquitin-like small archaeal modifier protein 1 (SAMP1) from Haloferax volcanii
-
Jeong YJ, Jeong BC, Song HK (2011) Crystal structure of ubiquitin-like small archaeal modifier protein 1 (SAMP1) from Haloferax volcanii. Biochem Biophys Res Commun 405: 112-117.
-
(2011)
Biochem Biophys Res Commun
, vol.405
, pp. 112-117
-
-
Jeong, Y.J.1
Jeong, B.C.2
Song, H.K.3
-
54
-
-
79952355107
-
Selective autophagy mediated by autophagic adapter proteins
-
Johansen T, Lamark T (2011) Selective autophagy mediated by autophagic adapter proteins. Autophagy 7: 279-296.
-
(2011)
Autophagy
, vol.7
, pp. 279-296
-
-
Johansen, T.1
Lamark, T.2
-
55
-
-
44449129585
-
A targeted proteomic analysis of the ubiquitin-like modifier Nedd8 and associated proteins
-
Jones J, Wu K, Yang Y, Guerrero C, Nillegoda N, Pan ZQ, Huang L (2008) A targeted proteomic analysis of the ubiquitin-like modifier Nedd8 and associated proteins. J Proteome Res 7: 1274-1287.
-
(2008)
J Proteome Res
, vol.7
, pp. 1274-1287
-
-
Jones, J.1
Wu, K.2
Yang, Y.3
Guerrero, C.4
Nillegoda, N.5
Pan, Z.Q.6
Huang, L.7
-
56
-
-
80053208035
-
The Arabidopsis deubiquitinating enzyme AMSH3 interacts with ESCRT-III subunits and regulates their localization
-
Katsiarimpa A, Anzenberger F, Schlager N, Neubert S, Hauser MT, Schwechheimer C, Isono E (2011) The Arabidopsis deubiquitinating enzyme AMSH3 interacts with ESCRT-III subunits and regulates their localization. Plant Cell 23: 3026-3040.
-
(2011)
Plant Cell
, vol.23
, pp. 3026-3040
-
-
Katsiarimpa, A.1
Anzenberger, F.2
Schlager, N.3
Neubert, S.4
Hauser, M.T.5
Schwechheimer, C.6
Isono, E.7
-
58
-
-
82455179484
-
Systematic and quantitative assessment of the ubiquitin-modified proteome
-
Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, et al (2011) Systematic and quantitative assessment of the ubiquitin-modified proteome. Mol Cell 44: 325-340.
-
(2011)
Mol Cell
, vol.44
, pp. 325-340
-
-
Kim, W.1
Bennett, E.J.2
Huttlin, E.L.3
Guo, A.4
Li, J.5
Possemato, A.6
Sowa, M.E.7
Rad, R.8
Rush, J.9
Comb, M.J.10
-
59
-
-
35448981935
-
Autophagy: From phenomenology to molecular understanding in less than a decade
-
Klionsky DJ (2007) Autophagy: from phenomenology to molecular understanding in less than a decade. Nat Rev Mol Cell Biol 8: 931-937.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 931-937
-
-
Klionsky, D.J.1
-
61
-
-
3142519570
-
A novel protein-conjugating system for Ufm1, a ubiquitin-fold modifier
-
Komatsu M, Chiba T, Tatsumi K, Iemura S, Tanida I, Okazaki N, Ueno T, Kominami E, Natsume T, Tanaka K (2004) A novel protein-conjugating system for Ufm1, a ubiquitin-fold modifier. EMBO J 23: 1977-1986.
-
(2004)
EMBO J
, vol.23
, pp. 1977-1986
-
-
Komatsu, M.1
Chiba, T.2
Tatsumi, K.3
Iemura, S.4
Tanida, I.5
Okazaki, N.6
Ueno, T.7
Kominami, E.8
Natsume, T.9
Tanaka, K.10
-
62
-
-
33644993733
-
Genome analysis and functional characterization of the E2 and RINGtype E3 ligase ubiquitination enzymes of Arabidopsis
-
Kraft E, Stone SL, Ma L, Su N, Gao Y, Lau OS, Deng XW, Callis J (2005) Genome analysis and functional characterization of the E2 and RINGtype E3 ligase ubiquitination enzymes of Arabidopsis. Plant Physiol 139: 1597-1611.
-
(2005)
Plant Physiol
, vol.139
, pp. 1597-1611
-
-
Kraft, E.1
Stone, S.L.2
Ma, L.3
Su, N.4
Gao, Y.5
Lau, O.S.6
Deng, X.W.7
Callis, J.8
-
63
-
-
77954762337
-
The NMR structure of the autophagy-related protein Atg8
-
Kumeta H, Watanabe M, Nakatogawa H, Yamaguchi M, Ogura K, Adachi W, Fujioka Y, Noda NN, Ohsumi Y, Inagaki F (2010) The NMR structure of the autophagy-related protein Atg8. J Biomol NMR 47: 237-241.
-
(2010)
J Biomol NMR
, vol.47
, pp. 237-241
-
-
Kumeta, H.1
Watanabe, M.2
Nakatogawa, H.3
Yamaguchi, M.4
Ogura, K.5
Adachi, W.6
Fujioka, Y.7
Noda, N.N.8
Ohsumi, Y.9
Inagaki, F.10
-
64
-
-
0037470238
-
The small ubiquitin-like modifier (SUMO) protein modification system in Arabidopsis: Accumulation of SUMO1 and -2 conjugates is increased by stress
-
Kurepa J, Walker JM, Smalle J, Gosink MM, Davis SJ, Durham TL, Sung DY, Vierstra RD (2003) The small ubiquitin-like modifier (SUMO) protein modification system in Arabidopsis: accumulation of SUMO1 and -2 conjugates is increased by stress. J Biol Chem 278: 6862-6872.
-
(2003)
J Biol Chem
, vol.278
, pp. 6862-6872
-
-
Kurepa, J.1
Walker, J.M.2
Smalle, J.3
Gosink, M.M.4
Davis, S.J.5
Durham, T.L.6
Sung, D.Y.7
Vierstra, R.D.8
-
65
-
-
0035891318
-
Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex
-
Lake MW, Wuebbens MM, Rajagopalan KV, Schindelin H (2001) Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex. Nature 414: 325-329.
-
(2001)
Nature
, vol.414
, pp. 325-329
-
-
Lake, M.W.1
Wuebbens, M.M.2
Rajagopalan, K.V.3
Schindelin, H.4
-
66
-
-
33845636600
-
Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase
-
Lee J, Nam J, Park HC, Na G, Miura K, Jin JB, Yoo CY, Baek D, Kim DH, Jeong JC, et al (2007) Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase. Plant J 49: 79-90.
-
(2007)
Plant J
, vol.49
, pp. 79-90
-
-
Lee, J.1
Nam, J.2
Park, H.C.3
Na, G.4
Miura, K.5
Jin, J.B.6
Yoo, C.Y.7
Baek, D.8
Kim, D.H.9
Jeong, J.C.10
-
67
-
-
43549110569
-
Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases
-
Lee JH, Terzaghi W, Gusmaroli G, Charron JB, Yoon HJ, Chen H, He YJ, Xiong Y, Deng XW (2008) Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases. Plant Cell 20: 152-167.
-
(2008)
Plant Cell
, vol.20
, pp. 152-167
-
-
Lee, J.H.1
Terzaghi, W.2
Gusmaroli, G.3
Charron, J.B.4
Yoon, H.J.5
Chen, H.6
He, Y.J.7
Xiong, Y.8
Deng, X.W.9
-
68
-
-
62249160690
-
Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA
-
Leidel S, Pedrioli PG, Bucher T, Brost R, Costanzo M, Schmidt A, Aebersold R, Boone C, Hofmann K, Peter M (2009) Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA. Nature 458: 228-232.
-
(2009)
Nature
, vol.458
, pp. 228-232
-
-
Leidel, S.1
Pedrioli, P.G.2
Bucher, T.3
Brost, R.4
Costanzo, M.5
Schmidt, A.6
Aebersold, R.7
Boone, C.8
Hofmann, K.9
Peter, M.10
-
69
-
-
79953760562
-
Ubiquitin fold modifier 1 (UFM1) and its target UFBP1 protect pancreatic beta cells from ER stress-induced apoptosis
-
Lemaire K, Moura RF, Granvik M, Igoillo-Esteve M, Hohmeier HE, Hendrickx N, Newgard CB, Waelkens E, Cnop M, Schuit F (2011) Ubiquitin fold modifier 1 (UFM1) and its target UFBP1 protect pancreatic beta cells from ER stress-induced apoptosis. PLoS ONE 6: e18517.
-
(2011)
PLoS ONE
, vol.6
-
-
Lemaire, K.1
Moura, R.F.2
Granvik, M.3
Igoillo-Esteve, M.4
Hohmeier, H.E.5
Hendrickx, N.6
Newgard, C.B.7
Waelkens, E.8
Cnop, M.9
Schuit, F.10
-
70
-
-
79959978116
-
Autophagy differentially controls plant basal immunity to biotrophic and necrotrophic pathogens
-
Lenz HD, Haller E, Melzer E, Kober K, Wurster K, Stahl M, Bassham DC, Vierstra RD, Parker JE, Bautor J, et al (2011) Autophagy differentially controls plant basal immunity to biotrophic and necrotrophic pathogens. Plant J 66: 818-830.
-
(2011)
Plant J
, vol.66
, pp. 818-830
-
-
Lenz, H.D.1
Haller, E.2
Melzer, E.3
Kober, K.4
Wurster, K.5
Stahl, M.6
Bassham, D.C.7
Vierstra, R.D.8
Parker, J.E.9
Bautor, J.10
-
71
-
-
84865596150
-
Autophagy: A multifaceted intracellular system for bulk and selective recycling
-
(in press)
-
Li F, Vierstra RD (2012) Autophagy: a multifaceted intracellular system for bulk and selective recycling. Trends Plant Sci (in press).
-
(2012)
Trends Plant Sci
-
-
Li, F.1
Vierstra, R.D.2
-
72
-
-
78349268382
-
Genomic Evolution and Complexity of the Anaphase-promoting Complex (APC) In Land Plants
-
Lima MdF, Eloy NB, Pegoraro C, Sagit R, Rojas C, Bretz T, Vargas L, Elofsson A, de Oliveira AC, Hemerly AS, et al (2010) Genomic evolution and complexity of the anaphase-promoting complex (APC) in land plants. BMC Plant Biol 10: 254.
-
(2010)
BMC Plant Biol
, vol.10
, pp. 254
-
-
Lima, M.1
Eloy, N.B.2
Pegoraro, C.3
Sagit, R.4
Rojas, C.5
Bretz, T.6
Vargas, L.7
Elofsson, A.8
de Oliveira, A.C.9
Hemerly, A.S.10
-
73
-
-
34250620427
-
The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy
-
Liu Y, Koornneef M, Soppe WJ (2007) The absence of histone H2B monoubiquitination in the Arabidopsis hub1 (rdo4) mutant reveals a role for chromatin remodeling in seed dormancy. Plant Cell 19: 433-444.
-
(2007)
Plant Cell
, vol.19
, pp. 433-444
-
-
Liu, Y.1
Koornneef, M.2
Soppe, W.J.3
-
74
-
-
19344368318
-
Autophagy regulates programmed cell death during the plant innate immune response
-
Liu Y, Schiff M, Czymmek K, Tallóczy Z, Levine B, Dinesh-Kumar SP (2005) Autophagy regulates programmed cell death during the plant innate immune response. Cell 121: 567-577.
-
(2005)
Cell
, vol.121
, pp. 567-577
-
-
Liu, Y.1
Schiff, M.2
Czymmek, K.3
Tallóczy, Z.4
Levine, B.5
Dinesh-Kumar, S.P.6
-
75
-
-
0035906430
-
Promotion of Nedd8-Cul1 conjugate cleavage by COP9 signalosome
-
Lyapina S, Cope G, Shevchenko A, Serino G, Tsuge T, Zhou C, Wolf DA, Wei N, Shevchenko A, Deshaies RJ (2001) Promotion of Nedd8-Cul1 conjugate cleavage by COP9 signalosome. Science 292: 1382-1385.
-
(2001)
Science
, vol.292
, pp. 1382-1385
-
-
Lyapina, S.1
Cope, G.2
Shevchenko, A.3
Serino, G.4
Tsuge, T.5
Zhou, C.6
Wolf, D.A.7
Wei, N.8
Shevchenko, A.9
Deshaies, R.J.10
-
76
-
-
34247342702
-
Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants
-
Maor R, Jones A, Nühse TS, Studholme DJ, Peck SC, Shirasu K (2007) Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants. Mol Cell Proteomics 6: 601-610.
-
(2007)
Mol Cell Proteomics
, vol.6
, pp. 601-610
-
-
Maor, R.1
Jones, A.2
Nühse, T.S.3
Studholme, D.J.4
Peck, S.C.5
Shirasu, K.6
-
77
-
-
0030455748
-
A novel ubiquitin-like modification modulates the partitioning of the Ran-GTPase-activating protein RanGAP1 between the cytosol and the nuclear pore complex
-
Matunis MJ, Coutavas E, Blobel G (1996) A novel ubiquitin-like modification modulates the partitioning of the Ran-GTPase-activating protein RanGAP1 between the cytosol and the nuclear pore complex. J Cell Biol 135: 1457-1470.
-
(1996)
J Cell Biol
, vol.135
, pp. 1457-1470
-
-
Matunis, M.J.1
Coutavas, E.2
Blobel, G.3
-
78
-
-
84860469639
-
mRNA export and sumoylation: Lessons from plants
-
Meier I (2012) mRNA export and sumoylation: lessons from plants. Biochim Biophys Acta 1819: 531-537.
-
(2012)
Biochim Biophys Acta
, vol.1819
, pp. 531
-
-
Meier, I.1
-
79
-
-
78049235116
-
Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis
-
Miller MJ, Barrett-Wilt GA, Hua Z, Vierstra RD (2010) Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis. Proc Natl Acad Sci USA 107: 16512-16517.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 16512-16517
-
-
Miller, M.J.1
Barrett-Wilt, G.A.2
Hua, Z.3
Vierstra, R.D.4
-
80
-
-
85043062004
-
Quantitative proteomics reveal factors regulating RNA biology as dynamic targets of stressinduced SUMOylation in Arabidopsis
-
(in press)
-
Miller MJ, Scalf M, Smith LM, Vierstra RD (2012) Quantitative proteomics reveal factors regulating RNA biology as dynamic targets of stressinduced SUMOylation in Arabidopsis. Mol Cell Proteomics (in press).
-
(2012)
Mol Cell Proteomics
-
-
Miller, M.J.1
Scalf, M.2
Smith, L.M.3
Vierstra, R.D.4
-
81
-
-
79952729890
-
E1and ubiquitin-like proteins provide a direct link between protein conjugation and sulfur transfer in Archaea
-
Miranda HV, Nembhard N, Su D, Hepowit N, Krause DJ, Pritz JR, Phillips C, Söll D, Maupin-Furlow JA (2011) E1and ubiquitin-like proteins provide a direct link between protein conjugation and sulfur transfer in Archaea. Proc Natl Acad Sci USA 108: 4417-4422.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 4417-4422
-
-
Miranda, H.V.1
Nembhard, N.2
Su, D.3
Hepowit, N.4
Krause, D.J.5
Pritz, J.R.6
Phillips, C.7
Söll, D.8
Maupin-Furlow, J.A.9
-
82
-
-
79958262459
-
Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing
-
Mishra SK, Ammon T, Popowicz GM, Krajewski M, Nagel RJ, Ares M Jr, Holak TA, Jentsch S (2011) Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing. Nature 474: 173-178.
-
(2011)
Nature
, vol.474
, pp. 173-178
-
-
Mishra, S.K.1
Ammon, T.2
Popowicz, G.M.3
Krajewski, M.4
Nagel, R.J.5
Ares Jr., M.6
Holak, T.A.7
Jentsch, S.8
-
83
-
-
34848870906
-
Sumoylation, a post-translational regulatory process in plants
-
Miura K, Jin JB, Hasegawa PM (2007a) Sumoylation, a post-translational regulatory process in plants. Curr Opin Plant Biol 10: 495-502.
-
(2007)
Curr Opin Plant Biol
, vol.10
, pp. 495-502
-
-
Miura, K.1
Jin, J.B.2
Hasegawa, P.M.3
-
84
-
-
34250636610
-
SIZ1-mediated sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance in Arabidopsis
-
Miura K, Jin JB, Lee J, Yoo CY, Stirm V, Miura T, Ashworth EN, Bressan RA, Yun DJ, Hasegawa PM (2007b) SIZ1-mediated sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance in Arabidopsis. Plant Cell 19: 1403-1414.
-
(2007)
Plant Cell
, vol.19
, pp. 1403-1414
-
-
Miura, K.1
Jin, J.B.2
Lee, J.3
Yoo, C.Y.4
Stirm, V.5
Miura, T.6
Ashworth, E.N.7
Bressan, R.A.8
Yun, D.J.9
Hasegawa, P.M.10
-
85
-
-
65249184459
-
Sumoylation of ABI5 by the Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling
-
Miura K, Lee J, Jin JB, Yoo CY, Miura T, Hasegawa PM (2009) Sumoylation of ABI5 by the Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling. Proc Natl Acad Sci USA 106: 5418-5423.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 5418-5423
-
-
Miura, K.1
Lee, J.2
Jin, J.B.3
Yoo, C.Y.4
Miura, T.5
Hasegawa, P.M.6
-
86
-
-
21144455484
-
The Arabidopsis SUMO E3 ligase SIZ1 controls phosphate deficiency responses
-
Miura K, Rus A, Sharkhuu A, Yokoi S, Karthikeyan AS, Raghothama KG, Baek D, Koo YD, Jin JB, Bressan RA, et al (2005) The Arabidopsis SUMO E3 ligase SIZ1 controls phosphate deficiency responses. Proc Natl Acad Sci USA 102: 7760-7765.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 7760-7765
-
-
Miura, K.1
Rus, A.2
Sharkhuu, A.3
Yokoi, S.4
Karthikeyan, A.S.5
Raghothama, K.G.6
Baek, D.7
Koo, Y.D.8
Jin, J.B.9
Bressan, R.A.10
-
87
-
-
0842264053
-
A large complement of the predicted Arabidopsis ARM repeat proteins are members of the U-box E3 ubiquitin ligase family
-
Mudgil Y, Shiu SH, Stone SL, Salt JN, Goring DR (2004) A large complement of the predicted Arabidopsis ARM repeat proteins are members of the U-box E3 ubiquitin ligase family. Plant Physiol 134: 59-66.
-
(2004)
Plant Physiol
, vol.134
, pp. 59-66
-
-
Mudgil, Y.1
Shiu, S.H.2
Stone, S.L.3
Salt, J.N.4
Goring, D.R.5
-
88
-
-
0141625301
-
Structural determinants for the binding of ubiquitin-like domains to the proteasome
-
Mueller TD, Feigon J (2003) Structural determinants for the binding of ubiquitin-like domains to the proteasome. EMBO J 22: 4634-4645.
-
(2003)
EMBO J
, vol.22
, pp. 4634-4645
-
-
Mueller, T.D.1
Feigon, J.2
-
89
-
-
33846471122
-
Proteasome-independent functions of ubiquitin in endocytosis and signaling
-
Mukhopadhyay D, Riezman H (2007) Proteasome-independent functions of ubiquitin in endocytosis and signaling. Science 315: 201-205.
-
(2007)
Science
, vol.315
, pp. 201-205
-
-
Mukhopadhyay, D.1
Riezman, H.2
-
90
-
-
84865714121
-
Arabidopsis molybdopterin biosynthesis protein Cnx5 collaborates with the ubiquitin-like protein Urm11 in the thio-modification of tRNA
-
(in press)
-
Nakai Y, Harada A, Hashiguchi Y, Nakai M, Hayashi H (2012) Arabidopsis molybdopterin biosynthesis protein Cnx5 collaborates with the ubiquitin-like protein Urm11 in the thio-modification of tRNA. J Biol Chem (in press).
-
(2012)
J Biol Chem
-
-
Nakai, Y.1
Harada, A.2
Hashiguchi, Y.3
Nakai, M.4
Hayashi, H.5
-
91
-
-
57249083972
-
Structural basis of target recognition by Atg8/LC3 during selective autophagy
-
Noda NN, Kumeta H, Nakatogawa H, Satoo K, Adachi W, Ishii J, Fujioka Y, Ohsumi Y, Inagaki F (2008) Structural basis of target recognition by Atg8/LC3 during selective autophagy. Genes Cells 13: 1211-1218.
-
(2008)
Genes Cells
, vol.13
, pp. 1211-1218
-
-
Noda, N.N.1
Kumeta, H.2
Nakatogawa, H.3
Satoo, K.4
Adachi, W.5
Ishii, J.6
Fujioka, Y.7
Ohsumi, Y.8
Inagaki, F.9
-
92
-
-
77950484269
-
Atg8-family interacting motif crucial for selective autophagy
-
Noda NN, Ohsumi Y, Inagaki F (2010) Atg8-family interacting motif crucial for selective autophagy. FEBS Lett 584: 1379-1385.
-
(2010)
FEBS Lett
, vol.584
, pp. 1379-1385
-
-
Noda, N.N.1
Ohsumi, Y.2
Inagaki, F.3
-
93
-
-
79955598535
-
Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group
-
Nunoura T, Takaki Y, Kakuta J, Nishi S, Sugahara J, Kazama H, Chee GJ, Hattori M, Kanai A, Atomi H, et al (2011) Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group. Nucleic Acids Res 39: 3204-3223.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 3204-3223
-
-
Nunoura, T.1
Takaki, Y.2
Kakuta, J.3
Nishi, S.4
Sugahara, J.5
Kazama, H.6
Chee, G.J.7
Hattori, M.8
Kanai, A.9
Atomi, H.10
-
94
-
-
0035286734
-
Molecular dissection of autophagy: Two ubiquitin-like systems
-
Ohsumi Y (2001) Molecular dissection of autophagy: two ubiquitin-like systems. Nat Rev Mol Cell Biol 2: 211-216.
-
(2001)
Nat Rev Mol Cell Biol
, vol.2
, pp. 211-216
-
-
Ohsumi, Y.1
-
95
-
-
79960172953
-
Cysteine ubiquitination of PTS1 receptor Pex5p regulates Pex5p recycling
-
Okumoto K, Misono S, Miyata N, Matsumoto Y, Mukai S, Fujiki Y (2011) Cysteine ubiquitination of PTS1 receptor Pex5p regulates Pex5p recycling. Traffic 12: 1067-1083.
-
(2011)
Traffic
, vol.12
, pp. 1067-1083
-
-
Okumoto, K.1
Misono, S.2
Miyata, N.3
Matsumoto, Y.4
Mukai, S.5
Fujiki, Y.6
-
96
-
-
79960596484
-
Arabidopsis nitrate reductase activity is stimulated by the E3 SUMO ligase AtSIZ1
-
Park BS, Song JT, Seo HS (2011) Arabidopsis nitrate reductase activity is stimulated by the E3 SUMO ligase AtSIZ1. Nat Commun 2: 400.
-
(2011)
Nat Commun
, vol.2
, pp. 400
-
-
Park, B.S.1
Song, J.T.2
Seo, H.S.3
-
97
-
-
56449118262
-
Ubiquitinlike protein involved in the proteasome pathway of Mycobacterium tuberculosis
-
Pearce MJ, Mintseris J, Ferreyra J, Gygi SP, Darwin KH (2008) Ubiquitinlike protein involved in the proteasome pathway of Mycobacterium tuberculosis. Science 322: 1104-1107.
-
(2008)
Science
, vol.322
, pp. 1104-1107
-
-
Pearce, M.J.1
Mintseris, J.2
Ferreyra, J.3
Gygi, S.P.4
Darwin, K.H.5
-
98
-
-
79952129481
-
Urm1 couples sulfur transfer to ubiquitin-like protein function in oxidative stress
-
Petroski MD, Salvesen GS, Wolf DA (2011) Urm1 couples sulfur transfer to ubiquitin-like protein function in oxidative stress. Proc Natl Acad Sci USA 108: 1749-1750.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 1749-1750
-
-
Petroski, M.D.1
Salvesen, G.S.2
Wolf, D.A.3
-
99
-
-
45149130031
-
The ATG12-conjugating enzyme ATG10 is essential for autophagic vesicle formation in Arabidopsis thaliana
-
Phillips AR, Suttangkakul A, Vierstra RD (2008) The ATG12-conjugating enzyme ATG10 is essential for autophagic vesicle formation in Arabidopsis thaliana. Genetics 178: 1339-1353.
-
(2008)
Genetics
, vol.178
, pp. 1339-1353
-
-
Phillips, A.R.1
Suttangkakul, A.2
Vierstra, R.D.3
-
100
-
-
77957239114
-
Proteome-wide identification of mycobacterial pupylation targets
-
Poulsen C, Akhter Y, Jeon AH, Schmitt-Ulms G, Meyer HE, Stefanski A, Stühler K, Wilmanns M, Song YH (2010) Proteome-wide identification of mycobacterial pupylation targets. Mol Syst Biol 6: 386.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 386
-
-
Poulsen, C.1
Akhter, Y.2
Jeon, A.H.3
Schmitt-Ulms, G.4
Meyer, H.E.5
Stefanski, A.6
Stühler, K.7
Wilmanns, M.8
Song, Y.H.9
-
101
-
-
0041663661
-
Solution structure of the yeast ubiquitin-like modifier protein Hub1
-
Ramelot TA, Cort JR, Yee AA, Semesi A, Edwards AM, Arrowsmith CH, Kennedy MA (2003) Solution structure of the yeast ubiquitin-like modifier protein Hub1. J Struct Funct Genomics 4: 25-30.
-
(2003)
J Struct Funct Genomics
, vol.4
, pp. 25-30
-
-
Ramelot, T.A.1
Cort, J.R.2
Yee, A.A.3
Semesi, A.4
Edwards, A.M.5
Arrowsmith, C.H.6
Kennedy, M.A.7
-
102
-
-
0032567404
-
The Rub family of ubiquitin-like proteins: Crystal structure of Arabidopsis Rub1 and expression of multiple Rubs in Arabidopsis
-
Rao-Naik C, delaCruz W, Laplaza JM, Tan S, Callis J, Fisher AJ (1998) The Rub family of ubiquitin-like proteins: crystal structure of Arabidopsis Rub1 and expression of multiple Rubs in Arabidopsis. J Biol Chem 273: 34976-34982.
-
(1998)
J Biol Chem
, vol.273
, pp. 34976-34982
-
-
Rao-Naik, C.1
Delacruz, W.2
Laplaza, J.M.3
Tan, S.4
Callis, J.5
Fisher, A.J.6
-
103
-
-
77950401024
-
The ubiquitin-proteasome system regulates plant hormone signaling
-
Santner A, Estelle M (2010) The ubiquitin-proteasome system regulates plant hormone signaling. Plant J 61: 1029-1040.
-
(2010)
Plant J
, vol.61
, pp. 1029-1040
-
-
Santner, A.1
Estelle, M.2
-
104
-
-
67649696034
-
Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis
-
Saracco SA, Hansson M, Scalf M, Walker JM, Smith LM, Vierstra RD (2009) Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis. Plant J 59: 344-358.
-
(2009)
Plant J
, vol.59
, pp. 344-358
-
-
Saracco, S.A.1
Hansson, M.2
Scalf, M.3
Walker, J.M.4
Smith, L.M.5
Vierstra, R.D.6
-
105
-
-
34548691835
-
Genetic analysis of SUMOylation in Arabidopsis: Conjugation of SUMO1 and SUMO2 to nuclear proteins is essential
-
Saracco SA, Miller MJ, Kurepa J, Vierstra RD (2007) Genetic analysis of SUMOylation in Arabidopsis: conjugation of SUMO1 and SUMO2 to nuclear proteins is essential. Plant Physiol 145: 119-134.
-
(2007)
Plant Physiol
, vol.145
, pp. 119-134
-
-
Saracco, S.A.1
Miller, M.J.2
Kurepa, J.3
Vierstra, R.D.4
-
106
-
-
33645108793
-
Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier 1
-
Sasakawa H, Sakata E, Yamaguchi Y, Komatsu M, Tatsumi K, Kominami E, Tanaka K, Kato K (2006) Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier 1. Biochem Biophys Res Commun 343: 21-26.
-
(2006)
Biochem Biophys Res Commun
, vol.343
, pp. 21-26
-
-
Sasakawa, H.1
Sakata, E.2
Yamaguchi, Y.3
Komatsu, M.4
Tatsumi, K.5
Kominami, E.6
Tanaka, K.7
Kato, K.8
-
107
-
-
0036801543
-
Multiple ubiquitin ligasemediated processes require COP9 signalosome and AXR1 function
-
Schwechheimer C, Serino G, Deng XW (2002) Multiple ubiquitin ligasemediated processes require COP9 signalosome and AXR1 function. Plant Cell 14: 2553-2563.
-
(2002)
Plant Cell
, vol.14
, pp. 2553-2563
-
-
Schwechheimer, C.1
Serino, G.2
Deng, X.W.3
-
108
-
-
78549274705
-
Jasmonate perception by inositol phosphate-potentiated COI1-JAZ coreceptor
-
Sheard LB, Tan X, Mao H, Withers J, Ben-Missan G, Hinds TR, Kobayashi Y, Hsu F-F, Sharon M, Browse J, et al (2011) Jasmonate perception by inositol phosphate-potentiated COI1-JAZ coreceptor. Nature 468: 400-405.
-
(2011)
Nature
, vol.468
, pp. 400-405
-
-
Sheard, L.B.1
Tan, X.2
Mao, H.3
Withers, J.4
Ben-Missan, G.5
Hinds, T.R.6
Kobayashi, Y.7
Hsu, F.-F.8
Sharon, M.9
Browse, J.10
-
109
-
-
0036124032
-
Identification of the 19S regulatory particle subunits from the rice 26S proteasome
-
Shibahara T, Kawasaki H, Hirano H (2002) Identification of the 19S regulatory particle subunits from the rice 26S proteasome. Eur J Biochem 269: 1474-1483.
-
(2002)
Eur J Biochem
, vol.269
, pp. 1474-1483
-
-
Shibahara, T.1
Kawasaki, H.2
Hirano, H.3
-
110
-
-
78650253267
-
Ubiquitylation of an ERAD substrate occurs on multiple types of amino acids
-
Shimizu Y, Okuda-Shimizu Y, Hendershot LM (2010) Ubiquitylation of an ERAD substrate occurs on multiple types of amino acids. Mol Cell 40: 917-926.
-
(2010)
Mol Cell
, vol.40
, pp. 917-926
-
-
Shimizu, Y.1
Okuda-Shimizu, Y.2
Hendershot, L.M.3
-
111
-
-
3242665372
-
The ubiquitin 26S proteasome proteolytic pathway
-
Smalle J, Vierstra RD (2004) The ubiquitin 26S proteasome proteolytic pathway. Annu Rev Plant Biol 55: 555-590.
-
(2004)
Annu Rev Plant Biol
, vol.55
, pp. 555-590
-
-
Smalle, J.1
Vierstra, R.D.2
-
112
-
-
34250025664
-
Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination
-
Sridhar VV, Kapoor A, Zhang K, Zhu J, Zhou T, Hasegawa PM, Bressan RA, Zhu JK (2007) Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination. Nature 447: 735-738.
-
(2007)
Nature
, vol.447
, pp. 735-738
-
-
Sridhar, V.V.1
Kapoor, A.2
Zhang, K.3
Zhu, J.4
Zhou, T.5
Hasegawa, P.M.6
Bressan, R.A.7
Zhu, J.K.8
-
113
-
-
18044394093
-
Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis
-
Stone SL, Hauksdóttir H, Troy A, Herschleb J, Kraft E, Callis J (2005) Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. Plant Physiol 137: 13-30.
-
(2005)
Plant Physiol
, vol.137
, pp. 13-30
-
-
Stone, S.L.1
Hauksdóttir, H.2
Troy, A.3
Herschleb, J.4
Kraft, E.5
Callis, J.6
-
114
-
-
67349193285
-
Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes
-
Striebel F, Imkamp F, Sutter M, Steiner M, Mamedov A, Weber-Ban E (2009) Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes. Nat Struct Mol Biol 16: 647-651.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 647-651
-
-
Striebel, F.1
Imkamp, F.2
Sutter, M.3
Steiner, M.4
Mamedov, A.5
Weber-Ban, E.6
-
115
-
-
34648816891
-
Conserved function of RNF4 family proteins in eukaryotes: Targeting a ubiquitin ligase to SUMOylated proteins
-
Sun H, Leverson JD, Hunter T (2007) Conserved function of RNF4 family proteins in eukaryotes: targeting a ubiquitin ligase to SUMOylated proteins. EMBO J 26: 4102-4112.
-
(2007)
EMBO J
, vol.26
, pp. 4102-4112
-
-
Sun, H.1
Leverson, J.D.2
Hunter, T.3
-
116
-
-
82755166963
-
The ATG1/ATG13 protein kinase complex is both a regulator and a target of autophagic recycling in Arabidopsis
-
Suttangkakul A, Li F, Chung T, Vierstra RD (2011) The ATG1/ATG13 protein kinase complex is both a regulator and a target of autophagic recycling in Arabidopsis. Plant Cell 23: 3761-3779.
-
(2011)
Plant Cell
, vol.23
, pp. 3761-3779
-
-
Suttangkakul, A.1
Li, F.2
Chung, T.3
Vierstra, R.D.4
-
117
-
-
33644590635
-
The crystal structure of plant ATG12 and its biological implication in autophagy
-
Suzuki NN, Yoshimoto K, Fujioka Y, Ohsumi Y, Inagaki F (2005) The crystal structure of plant ATG12 and its biological implication in autophagy. Autophagy 1: 119-126.
-
(2005)
Autophagy
, vol.1
, pp. 119-126
-
-
Suzuki, N.N.1
Yoshimoto, K.2
Fujioka, Y.3
Ohsumi, Y.4
Inagaki, F.5
-
118
-
-
80052363973
-
Plant NBR1 is a selective autophagy substrate and a functional hybrid of the mammalian autophagic receptor NBR1 and p62/SQSTM1
-
Svenning S, Lamark T, Krause K, Johansen T (2011) Plant NBR1 is a selective autophagy substrate and a functional hybrid of the mammalian autophagic receptor NBR1 and p62/SQSTM1. Autophagy 7: 1-18.
-
(2011)
Autophagy
, vol.7
, pp. 1-18
-
-
Svenning, S.1
Lamark, T.2
Krause, K.3
Johansen, T.4
-
119
-
-
34247219263
-
Mechanism of auxin perception by the TIR1 ubiquitin ligase
-
Tan X, Calderon-Villalobos LI, Sharon M, Zheng C, Robinson CV, Estelle M, Zheng N (2007) Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature 446: 640-645.
-
(2007)
Nature
, vol.446
, pp. 640-645
-
-
Tan, X.1
Calderon-Villalobos, L.I.2
Sharon, M.3
Zheng, C.4
Robinson, C.V.5
Estelle, M.6
Zheng, N.7
-
120
-
-
79959381925
-
Comparative proteomic analysis identifies a role for SUMO in protein quality control
-
Tatham MH, Matic I, Mann M, Hay RT (2011) Comparative proteomic analysis identifies a role for SUMO in protein quality control. Sci Signal 4: rs4.
-
(2011)
Sci Signal
, vol.4
, Issue.4
-
-
Tatham, M.H.1
Matic, I.2
Mann, M.3
Hay, R.T.4
-
121
-
-
77949312862
-
A novel type of E3 ligase for the Ufm1 conjugation system
-
Tatsumi K, Sou YS, Tada N, Nakamura E, Iemura S, Natsume T, Kang SH, Chung CH, Kasahara M, Kominami E, et al (2010) A novel type of E3 ligase for the Ufm1 conjugation system. J Biol Chem 285: 5417-5427.
-
(2010)
J Biol Chem
, vol.285
, pp. 5417-5427
-
-
Tatsumi, K.1
Sou, Y.S.2
Tada, N.3
Nakamura, E.4
Iemura, S.5
Natsume, T.6
Kang, S.H.7
Chung, C.H.8
Kasahara, M.9
Kominami, E.10
-
122
-
-
84880278483
-
The Ufm1-activating enzyme Uba5 is indispensable for erythroid differentiation in mice
-
Tatsumi K, Yamamoto-Mukai H, Shimizu R, Waguri S, Sou YS, Sakamoto A, Taya C, Shitara H, Hara T, Chung CH, et al (2011) The Ufm1-activating enzyme Uba5 is indispensable for erythroid differentiation in mice. Nat Commun 2: 181.
-
(2011)
Nat Commun
, vol.2
, pp. 181
-
-
Tatsumi, K.1
Yamamoto-Mukai, H.2
Shimizu, R.3
Waguri, S.4
Sou, Y.S.5
Sakamoto, A.6
Taya, C.7
Shitara, H.8
Hara, T.9
Chung, C.H.10
-
123
-
-
33644594726
-
Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways
-
Thompson AR, Doelling JH, Suttangkakul A, Vierstra RD (2005) Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways. Plant Physiol 138: 2097-2110.
-
(2005)
Plant Physiol
, vol.138
, pp. 2097-2110
-
-
Thompson, A.R.1
Doelling, J.H.2
Suttangkakul, A.3
Vierstra, R.D.4
-
124
-
-
14744281878
-
Autophagic recycling: Lessons from yeast help define the process in plants
-
Thompson AR, Vierstra RD (2005) Autophagic recycling: lessons from yeast help define the process in plants. Curr Opin Plant Biol 8: 165-173.
-
(2005)
Curr Opin Plant Biol
, vol.8
, pp. 165-173
-
-
Thompson, A.R.1
Vierstra, R.D.2
-
125
-
-
33645930028
-
Protein aggregates are transported to vacuoles by a macroautophagic mechanism in nutrient-starved plant cells
-
Toyooka K, Moriyasu Y, Goto Y, Takeuchi M, Fukuda H, Matsuoka K (2006) Protein aggregates are transported to vacuoles by a macroautophagic mechanism in nutrient-starved plant cells. Autophagy 2: 96-106.
-
(2006)
Autophagy
, vol.2
, pp. 96-106
-
-
Toyooka, K.1
Moriyasu, Y.2
Goto, Y.3
Takeuchi, M.4
Fukuda, H.5
Matsuoka, K.6
-
126
-
-
77953915005
-
Ubiquitin signalling in DNA replication and repair
-
Ulrich HD, Walden H (2010) Ubiquitin signalling in DNA replication and repair. Nat Rev Mol Cell Biol 11: 479-489.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 479-489
-
-
Ulrich, H.D.1
Walden, H.2
-
127
-
-
36348977099
-
Ubiquitin-dependent proteolytic control of SUMO conjugates
-
Uzunova K, Göttsche K, Miteva M, Weisshaar SR, Glanemann C, Schnellhardt M, Niessen M, Scheel H, Hofmann K, Johnson ES, et al (2007) Ubiquitin-dependent proteolytic control of SUMO conjugates. J Biol Chem 282: 34167-34175.
-
(2007)
J Biol Chem
, vol.282
, pp. 34167-34175
-
-
Uzunova, K.1
Göttsche, K.2
Miteva, M.3
Weisshaar, S.R.4
Glanemann, C.5
Schnellhardt, M.6
Niessen, M.7
Scheel, H.8
Hofmann, K.9
Johnson, E.S.10
-
128
-
-
77955898187
-
Arabidopsis small ubiquitin-like modifier paralogs have distinct functions in development and defense
-
van den Burg HA, Kini RK, Schuurink RC, Takken FLW (2010) Arabidopsis small ubiquitin-like modifier paralogs have distinct functions in development and defense. Plant Cell 22: 1998-2016.
-
(2010)
Plant Cell
, vol.22
, pp. 1998-2016
-
-
van den Burg, H.A.1
Kini, R.K.2
Schuurink, R.C.3
Takken, F.L.W.4
-
129
-
-
79952142375
-
Role of the ubiquitin-like protein Urm1 as a noncanonical lysine-directed protein modifier
-
Van der Veen AG, Schorpp K, Schlieker C, Buti L, Damon JR, Spooner E, Ploegh HL, Jentsch S (2011) Role of the ubiquitin-like protein Urm1 as a noncanonical lysine-directed protein modifier. Proc Natl Acad Sci USA 108: 1763-1770.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 1763-1770
-
-
Van der Veen, A.G.1
Schorpp, K.2
Schlieker, C.3
Buti, L.4
Damon, J.R.5
Spooner, E.6
Ploegh, H.L.7
Jentsch, S.8
-
130
-
-
79953100002
-
The Arabidopsis multistress regulator TSPO is a heme binding membrane protein and a potential scavenger of porphyrins via an autophagy-dependent degradation mechanism
-
Vanhee C, Zapotoczny G, Masquelier D, Ghislain M, Batoko H (2011) The Arabidopsis multistress regulator TSPO is a heme binding membrane protein and a potential scavenger of porphyrins via an autophagy-dependent degradation mechanism. Plant Cell 23: 785-805.
-
(2011)
Plant Cell
, vol.23
, pp. 785-805
-
-
Vanhee, C.1
Zapotoczny, G.2
Masquelier, D.3
Ghislain, M.4
Batoko, H.5
-
131
-
-
67349254570
-
The ubiquitin-26S proteasome system at the nexus of plant biology
-
Vierstra RD (2009) The ubiquitin-26S proteasome system at the nexus of plant biology. Nat Rev Mol Cell Biol 10: 385-397.
-
(2009)
Nat Rev Mol Cell Biol
, vol.10
, pp. 385-397
-
-
Vierstra, R.D.1
-
132
-
-
0023234618
-
Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin
-
Vijay-Kumar S, Bugg CE, Wilkinson KD, Vierstra RD, Hatfield PM, Cook WJ (1987) Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin. J Biol Chem 262: 6396-6399.
-
(1987)
J Biol Chem
, vol.262
, pp. 6396-6399
-
-
Vijay-Kumar, S.1
Bugg, C.E.2
Wilkinson, K.D.3
Vierstra, R.D.4
Hatfield, P.M.5
Cook, W.J.6
-
133
-
-
60249083823
-
Autophagy plays a role in chloroplast degradation during senescence in individually darkened leaves
-
Wada S, Ishida H, Izumi M, Yoshimoto K, Ohsumi Y, Mae T, Makino A (2009) Autophagy plays a role in chloroplast degradation during senescence in individually darkened leaves. Plant Physiol 149: 885-893.
-
(2009)
Plant Physiol
, vol.149
, pp. 885-893
-
-
Wada, S.1
Ishida, H.2
Izumi, M.3
Yoshimoto, K.4
Ohsumi, Y.5
Mae, T.6
Makino, A.7
-
134
-
-
0035170874
-
Solution structure of ThiS and implications for the evolutionary roots of ubiquitin
-
Wang C, Xi J, Begley TP, Nicholson LK (2001) Solution structure of ThiS and implications for the evolutionary roots of ubiquitin. Nat Struct Biol 8: 47-51.
-
(2001)
Nat Struct Biol
, vol.8
, pp. 47-51
-
-
Wang, C.1
Xi, J.2
Begley, T.P.3
Nicholson, L.K.4
-
135
-
-
78549254832
-
Binding-induced folding of prokaryotic ubiquitin-like protein on the Mycobacterium proteasomal ATPase targets substrates for degradation
-
Wang T, Darwin KH, Li H (2010) Binding-induced folding of prokaryotic ubiquitin-like protein on the Mycobacterium proteasomal ATPase targets substrates for degradation. Nat Struct Mol Biol 17: 1352-1357.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 1352-1357
-
-
Wang, T.1
Darwin, K.H.2
Li, H.3
-
136
-
-
40849106789
-
Histone ubiquitination: Triggering gene activity
-
Weake VM, Workman JL (2008) Histone ubiquitination: triggering gene activity. Mol Cell 29: 653-663.
-
(2008)
Mol Cell
, vol.29
, pp. 653-663
-
-
Weake, V.M.1
Workman, J.L.2
-
137
-
-
11144276022
-
Ubiquitin-like protein Hub1 is required for pre-mRNA splicing and localization of an essential splicing factor in fission yeast
-
Wilkinson CR, Dittmar GA, Ohi MD, Uetz P, Jones N, Finley D (2004) Ubiquitin-like protein Hub1 is required for pre-mRNA splicing and localization of an essential splicing factor in fission yeast. Curr Biol 14: 2283-2288.
-
(2004)
Curr Biol
, vol.14
, pp. 2283-2288
-
-
Wilkinson, C.R.1
Dittmar, G.A.2
Ohi, M.D.3
Uetz, P.4
Jones, N.5
Finley, D.6
-
138
-
-
77952566949
-
Mechanisms, regulation and consequences of protein SUMOylation
-
Wilkinson KA, Henley JM (2010) Mechanisms, regulation and consequences of protein SUMOylation. Biochem J 428: 133-145.
-
(2010)
Biochem J
, vol.428
, pp. 133-145
-
-
Wilkinson, K.A.1
Henley, J.M.2
-
139
-
-
33846378524
-
Degradation of oxidized proteins by autophagy during oxidative stress in Arabidopsis
-
Xiong Y, Contento AL, Nguyen PQ, Bassham DC (2007) Degradation of oxidized proteins by autophagy during oxidative stress in Arabidopsis. Plant Physiol 143: 291-299.
-
(2007)
Plant Physiol
, vol.143
, pp. 291-299
-
-
Xiong, Y.1
Contento, A.L.2
Nguyen, P.Q.3
Bassham, D.C.4
-
140
-
-
40249111681
-
Ribosomal proteins are targets for the Nedd8 pathway
-
Xirodimas DP, Sundqvist A, Nakamura A, Shen L, Botting C, Hay RT (2008) Ribosomal proteins are targets for the Nedd8 pathway. EMBO Rep 9: 280-286.
-
(2008)
EMBO Rep
, vol.9
, pp. 280-286
-
-
Xirodimas, D.P.1
Sundqvist, A.2
Nakamura, A.3
Shen, L.4
Botting, C.5
Hay, R.T.6
-
141
-
-
33746803334
-
Solution structure of Urm1 and its implications for the origin of protein modifiers
-
Xu J, Zhang J, Wang L, Zhou J, Huang H, Wu J, Zhong Y, Shi Y (2006) Solution structure of Urm1 and its implications for the origin of protein modifiers. Proc Natl Acad Sci USA 103: 11625-11630.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 11625-11630
-
-
Xu, J.1
Zhang, J.2
Wang, L.3
Zhou, J.4
Huang, H.5
Wu, J.6
Zhong, Y.7
Shi, Y.8
-
142
-
-
0034512691
-
The ubiquitin-specific protease family from Arabidopsis: AtUBP1 and 2 are required for the resistance to the amino acid analog canavanine
-
Yan N, Doelling JH, Falbel TG, Durski AM, Vierstra RD (2000) The ubiquitin-specific protease family from Arabidopsis: AtUBP1 and 2 are required for the resistance to the amino acid analog canavanine. Plant Physiol 124: 1828-1843.
-
(2000)
Plant Physiol
, vol.124
, pp. 1828-1843
-
-
Yan, N.1
Doelling, J.H.2
Falbel, T.G.3
Durski, A.M.4
Vierstra, R.D.5
-
143
-
-
14744268915
-
Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy
-
Yoshimoto K, Hanaoka H, Sato S, Kato T, Tabata S, Noda T, Ohsumi Y (2004) Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy. Plant Cell 16: 2967-2983.
-
(2004)
Plant Cell
, vol.16
, pp. 2967-2983
-
-
Yoshimoto, K.1
Hanaoka, H.2
Sato, S.3
Kato, T.4
Tabata, S.5
Noda, T.6
Ohsumi, Y.7
-
145
-
-
0042431612
-
SIR1, an upstream component in auxin signaling identified by chemical genetics
-
Zhao Y, Dai X, Blackwell HE, Schreiber SL, Chory J (2003) SIR1, an upstream component in auxin signaling identified by chemical genetics. Science 301: 1107-1110.
-
(2003)
Science
, vol.301
, pp. 1107-1110
-
-
Zhao, Y.1
Dai, X.2
Blackwell, H.E.3
Schreiber, S.L.4
Chory, J.5
-
146
-
-
80053390952
-
Identification and functional analysis of Joka2, a tobacco member of the family of selective autophagy cargo receptors
-
Zientara-Rytter K, Lukomska J, Moniuszko G, Gwozdecki R, Surowiecki P, Lewandowska M, Liszewska F, Wawrzynska A, Sirko A (2011) Identification and functional analysis of Joka2, a tobacco member of the family of selective autophagy cargo receptors. Autophagy 7: 1145-1158.
-
(2011)
Autophagy
, vol.7
, pp. 1145-1158
-
-
Zientara-Rytter, K.1
Lukomska, J.2
Moniuszko, G.3
Gwozdecki, R.4
Surowiecki, P.5
Lewandowska, M.6
Liszewska, F.7
Wawrzynska, A.8
Sirko, A.9
|