Arabidopsis membrane-anchored ubiquitin-fold (MUB) proteins localize a specific subset of ubiquitin-conjugating (E2) enzymes to the plasma membrane

Journal of Biological Chemistry

Volumn 286, Issue 17, 2011, Pages 14913-14921

  Dowil, Rebecca T ^a   Lu, Xiaolong ^a   Saracco, Scott A ^b   Vierstra, Richard D ^c   Downes, Brian P ^a  

^a SAINT LOUIS UNIVERSITY   (United States)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

^c MONSANTO COMPANY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVE SITE; ARABIDOPSIS; COMPLEMENTATION; COVALENT ATTACHMENT; COVALENT LINKAGE; INTRACELLULAR PROTEINS; PLASMA MEMBRANES; PROTEIN INTERACTION; SPECIFIC SUBSET; SUB-CELLULAR; SUBCELLULAR LOCALIZATIONS; TARGET PROTEINS; UBIQUITIN; UBIQUITYLATION;

CELL MEMBRANES; ENZYMES; MACHINERY; PLASMAS;

MEMBRANES;

ARABIDOPSIS PROTEIN; MEMBRANE ANCHORED UBIQUITIN FOLD PROTEIN; UBIQUITIN CONJUGATING ENZYME E2; UNCLASSIFIED DRUG;

ARABIDOPSIS; ARTICLE; CELL MEMBRANE; CELL SPECIFICITY; CELLULAR DISTRIBUTION; CONJUGATION; CONTROLLED STUDY; COVALENT BOND; ENZYME ACTIVE SITE; MOLECULAR DOCKING; NONHUMAN; PRIORITY JOURNAL; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION; UBIQUITINATION;

ARABIDOPSIS PROTEINS; CELL MEMBRANE; HUMANS; MEMBRANE PROTEINS; PROTEIN TRANSPORT; UBIQUITIN-CONJUGATING ENZYMES; UBIQUITINATION; YEASTS;

ARABIDOPSIS;

EID: 79955387574     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.158808     Document Type: Article

References (58)

1. Vierstra, R. D. (2009) Nat. Rev. Mol. Cell Biol. 10, 385-397
2. Komander, D. (2009) Biochem. Soc. Trans. 37, 937-953
3. Woelk, T., Sigismund, S., Penengo, L., and Polo, S. (2007) Cell Div. 2, 11
4. Hicke, L., Schubert, H. L., and Hill, C. P. (2005) Nat. Rev. Mol. Cell Biol. 6, 610-621
5. Dupré, S., Urban-Grimal, D., and Haguenauer-Tsapis, R. (2004) Biochim. Biophys. Acta 1695, 89-111
6. Hicke, L., and Dunn, R. (2003) Annu. Rev. Cell Dev. Biol. 19, 141-172
7. Downes, B., and Vierstra, R. D. (2005) Biochem. Soc. Trans. 33, 393-399
8. Farmer, L. M., Book, A. J., Lee, K. H., Lin, Y. L., Fu, H., and Vierstra, R. D. (2010) Plant Cell 22, 124-142
9. Geng, J., and Klionsky, D. J. (2008) EMBO Rep. 9, 859-864
10. Lee, I., and Schindelin, H. (2008) Cell 134, 268-278
11. Fu, H., Lin, Y. L., and Fatimababy, A. S. (2010) Trends Plant Sci. 15, 375-386
12. Brzovic, P. S., Lissounov, A., Christensen, D. E., Hoyt, D. W., and Klevit, R. E. (2006) Mol. Cell 21, 873-880
13. Brzovic, P. S., and Klevit, R. E. (2006) Cell Cycle 5, 2867-2873
14. Sakata, E., Satoh, T., Yamamoto, S., Yamaguchi, Y., Yagi-Utsumi, M., Kurimoto, E., Tanaka, K., Wakatsuki, S., and Kato, K. (2010) Structure 18, 138-147
15. Lau, O. S., and Deng, X. W. (2009) Biochem. J. 418, 683-690
16. Lewis, M. J., Saltibus, L. F., Hau, D. D., Xiao, W., and Spyracopoulos, L. (2006) J. Biomol. NMR 34, 89-100
17. Wen, R., Torres-Acosta, J. A., Pastushok, L., Lai, X., Pelzer, L., Wang, H., and Xiao, W. (2008) Plant Cell 20, 213-227
18. Duda, D. M., van Waardenburg, R. C., Borg, L. A., McGarity, S., Nourse, A., Waddell, M. B., Bjornsti, M. A., and Schulman, B. A. (2007) J. Mol. Biol. 369, 619-630
19. Knipscheer, P., van Dijk, W. J., Olsen, J. V., Mann, M., and Sixma, T. K. (2007) EMBO J. 26, 2797-2807
20. Bencsath, K. P., Podgorski, M. S., Pagala, V. R., Slaughter, C. A., and Schulman, B. A. (2002) J. Biol. Chem. 277, 47938-47945
21. Capili, A. D., and Lima, C. D. (2007) J. Mol. Biol. 369, 608-618
22. Liu, Q., Jin, C., Liao, X., Shen, Z., Chen, D. J., and Chen, Y. (1999) J. Biol. Chem. 274, 16979-16987
23. Tatham, M. H., Kim, S., Yu, B., Jaffray, E., Song, J., Zheng, J., Rodriguez, M. S., Hay, R. T., and Chen, Y. (2003) Biochemistry 42, 9959-9969
24. de la Cruz, N. B., Peterson, F. C., Lytle, B. L., and Volkman, B. F. (2007) Protein Sci. 16, 1479-1484
25. Vinarov, D. A., Lytle, B. L., Peterson, F. C., Tyler, E. M., Volkman, B. F., and Markley, J. L. (2004) Nat. Methods 1, 149-153
26. Downes, B. P., Saracco, S. A., Lee, S. S., Crowell, D. N., and Vierstra, R. D. (2006) J. Biol. Chem. 281, 27145-27157
27. Kraft, E., Stone, S. L., Ma, L., Su, N., Gao, Y., Lau, O. S., Deng, X. W., and Callis, J. (2005) Plant Physiol. 139, 1597-1611
28. Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R., Thompson, J. D., Gibson, T. J., and Higgins, D. G. (2007) Bioinformatics 23, 2947-2948
29. Rambaut, A. (1996-2002) Sequence Alignment (Se-Al) Program, Version 2.0a11, University of Oxford, Oxford
30. *, Phylogenetic Analysis Using Parsimony (and Other Methods), Version 4.0b10, Sinauer Associates Inc. Publishers, Sunderland, MA
31. Waterhouse, A. M., Procter, J. B., Martin, D. M., Clamp, M., and Barton, G. J. (2009) Bioinformatics 25, 1189-1191
32. Livingstone, C. D., and Barton, G. J. (1993) Comput. Appl. Biosci. 9, 745-756
33. Rossignol, P., Collier, S., Bush, M., Shaw, P., and Doonan, J. H. (2007) J. Cell Sci. 120, 3678-3687
34. Earley, K. W., Haag, J. R., Pontes, O., Opper, K., Juehne, T., Song, K., and Pikaard, C. S. (2006) Plant J. 45, 616-629
35. Busso, D., Delagoutte-Busso, B., and Moras, D. (2005) Anal. Biochem. 343, 313-321
36. Citovsky, V., Lee, L. Y., Vyas, S., Glick, E., Chen, M. H., Vainstein, A., Gafni, Y., Gelvin, S. B., and Tzfira, T. (2006) J. Mol. Biol. 362, 1120-1131
37. Hajdukiewicz, P., Svab, Z., and Maliga, P. (1994) Plant Mol. Biol. 25, 989-994
38. Fuchs, B. C., Finger, R. E., Onan, M. C., and Bode, B. P. (2007) Am. J. Physiol. Cell Physiol. 293, C55-C63
39. Dinkins, R. D., Pflipsen, C., and Collins, G. B. (2003) Plant Sci. 165, 33-41
40. Rizzo, M. A., Springer, G. H., Granada, B., and Piston, D. W. (2004) Nat. Biotechnol. 22, 445-449
41. Fields, S., and Song, O. (1989) Nature 340, 245-246
42. James, P., Halladay, J., and Craig, E. A. (1996) Genetics 144, 1425-1436
43. Liu, L., Zhang, Y., Tang, S., Zhao, Q., Zhang, Z., Zhang, H., Dong, L., Guo, H., and Xie, Q. (2010) Plant J. 61, 893-903
44. Sloper-Mould, K. E., Jemc, J. C., Pickart, C. M., and Hicke, L. (2001) J. Biol. Chem. 276, 30483-30489
45. Christensen, D. E., Brzovic, P. S., and Klevit, R. E. (2007) Nat. Struct. Mol. Biol. 14, 941-948
46. Stone, S. L., Hauksdóttir, H., Troy, A., Herschleb, J., Kraft, E., and Callis, J. (2005) Plant Physiol. 137, 13-30
47. Girod, P. A., and Vierstra, R. D. (1993) J. Biol. Chem. 268, 955-960
48. Smalle, J., and Vierstra, R. D. (2004) Annu. Rev. Plant Biol. 55, 555-590
49. Gagne, J. M., Downes, B. P., Shiu, S. H., Durski, A. M., and Vierstra, R. D. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 11519-11524
50. Platta, H. W., and Erdmann, R. (2007) Trends Cell Biol. 17, 474-484
51. Kragt, A., Voorn-Brouwer, T., van den Berg, M., and Distel, B. (2005) J. Biol. Chem. 280, 7867-7874
52. Khan, B. R., and Zolman, B. K. (2010) Plant Physiol. 154, 1602-1615
53. Zolman, B. K., Monroe-Augustus, M., Silva, I. D., and Bartel, B. (2005) Plant Cell 17, 3422-3435
54. Kostova, Z., Mariano, J., Scholz, S., Koenig, C., and Weissman, A. M. (2009) J. Cell Sci. 122, 1374-1381
55. Biederer, T., Volkwein, C., and Sommer, T. (1997) Science 278, 1806-1809
56. Ravid, T., and Hochstrasser, M. (2007) Nat. Cell Biol. 9, 422-427
57. Koller, A., Snyder, W. B., Faber, K. N., Wenzel, T. J., Rangell, L., Keller, G. A., and Subramani, S. (1999) J. Cell Biol. 146, 99-112
58. David, Y., Ziv, T., Admon, A., and Navon, A. (2010) J. Biol. Chem. 285, 8595-8604