메뉴 건너뛰기




Volumn 7, Issue 7, 2012, Pages

Identifying responsive modules by mathematical programming: An application to budding yeast cell cycle

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTIC METHOD; ARTICLE; CAUSAL MODELING; CELL BUDDING; CELL CYCLE; CELL CYCLE ARREST; CELL CYCLE S PHASE; CLASSIFICATION ALGORITHM; DEPENDENT VARIABLE; GENE EXPRESSION; GENETIC DATABASE; GENETIC DIFFERENCE; INDEPENDENT VARIABLE; MATHEMATICAL MODEL; MATHEMATICAL PHENOMENA; MATHEMATICAL PROGRAMMING; MOLECULAR DYNAMICS; NONHUMAN; PHENOTYPE; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; REGULATORY MECHANISM; SYSTEM ANALYSIS; VALIDATION PROCESS; YEAST CELL;

EID: 84864373286     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0041854     Document Type: Article
Times cited : (8)

References (73)
  • 2
    • 19444375186 scopus 로고    scopus 로고
    • Bioinformatic methods for integrating whole-genome expression results into cellular networks
    • Cavalieri D, De Filippo C, (2005) Bioinformatic methods for integrating whole-genome expression results into cellular networks. Drug Discov Today 10: 727-734.
    • (2005) Drug Discov Today , vol.10 , pp. 727-734
    • Cavalieri, D.1    De Filippo, C.2
  • 3
    • 0034598746 scopus 로고    scopus 로고
    • Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
    • Alizadeh AA, Eisen MB, Davis RE, Ma C, Lossos IS, et al. (2000) Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature 403: 503-511.
    • (2000) Nature , vol.403 , pp. 503-511
    • Alizadeh, A.A.1    Eisen, M.B.2    Davis, R.E.3    Ma, C.4    Lossos, I.S.5
  • 5
    • 0033569406 scopus 로고    scopus 로고
    • Molecular classification of cancer: class discovery and class prediction by gene expression monitoring
    • Golub TR, Slonim DK, Tamayo P, Huard C, Gaasenbeek M, et al. (1999) Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science 286: 531-537.
    • (1999) Science , vol.286 , pp. 531-537
    • Golub, T.R.1    Slonim, D.K.2    Tamayo, P.3    Huard, C.4    Gaasenbeek, M.5
  • 6
    • 0037226593 scopus 로고    scopus 로고
    • A molecular signature of metastasis in primary solid tumors
    • Ramaswamy S, Ross KN, Lander ES, Golub TR, (2003) A molecular signature of metastasis in primary solid tumors. Nat Genet 33: 49-54.
    • (2003) Nat Genet , vol.33 , pp. 49-54
    • Ramaswamy, S.1    Ross, K.N.2    Lander, E.S.3    Golub, T.R.4
  • 7
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: understanding the cell's functional organization
    • Barabasi AL, Oltvai ZN, (2004) Network biology: understanding the cell's functional organization. Nat Rev Genet 5: 101-113.
    • (2004) Nat Rev Genet , vol.5 , pp. 101-113
    • Barabasi, A.L.1    Oltvai, Z.N.2
  • 8
    • 84889418078 scopus 로고    scopus 로고
    • Biomolecular networks: methods and applications in systems biology: John Wiley & Sons Inc
    • Chen L, Wang RS, Zhang XS, (2009) Biomolecular networks: methods and applications in systems biology: John Wiley & Sons Inc.
    • (2009)
    • Chen, L.1    Wang, R.S.2    Zhang, X.S.3
  • 9
    • 84892784542 scopus 로고    scopus 로고
    • Modeling Biomolecular Networks in Cells: Structures and Dynamics: Springer-Verlag
    • Chen L, Wang RQ, Li C, Aihara K, (2010) Modeling Biomolecular Networks in Cells: Structures and Dynamics: Springer-Verlag.
    • (2010)
    • Chen, L.1    Wang, R.Q.2    Li, C.3    Aihara, K.4
  • 10
    • 84859741480 scopus 로고    scopus 로고
    • Detecting early-warning signals for sudden deterioration of complex diseases by dynamical network biomarkers
    • Chen L, Liu R, Liu ZP, Li M, Aihara K, (2012) Detecting early-warning signals for sudden deterioration of complex diseases by dynamical network biomarkers. Sci Rep 2: 342.
    • (2012) Sci Rep , vol.2 , pp. 342
    • Chen, L.1    Liu, R.2    Liu, Z.P.3    Li, M.4    Aihara, K.5
  • 11
    • 84861893428 scopus 로고    scopus 로고
    • Coexpression network analysis in chronic hepatitis B and C hepatic lesion reveals distinct patterns of disease progression to hepatocellular carcinoma
    • He D, Liu ZP, Honda M, Kaneko S, Chen L, (2012) Coexpression network analysis in chronic hepatitis B and C hepatic lesion reveals distinct patterns of disease progression to hepatocellular carcinoma. J Mol Cell Biol.
    • (2012) J Mol Cell Biol
    • He, D.1    Liu, Z.P.2    Honda, M.3    Kaneko, S.4    Chen, L.5
  • 12
    • 0037263812 scopus 로고    scopus 로고
    • MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data
    • Doniger SW, Salomonis N, Dahlquist KD, Vranizan K, Lawlor SC, et al. (2003) MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data. Genome Biol 4: R7.
    • (2003) Genome Biol , vol.4
    • Doniger, S.W.1    Salomonis, N.2    Dahlquist, K.D.3    Vranizan, K.4    Lawlor, S.C.5
  • 14
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles
    • Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, et al. (2005) Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A 102: 15545-15550.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 15545-15550
    • Subramanian, A.1    Tamayo, P.2    Mootha, V.K.3    Mukherjee, S.4    Ebert, B.L.5
  • 15
    • 34547844074 scopus 로고    scopus 로고
    • A Markov random field model for network-based analysis of genomic data
    • Wei Z, Li H, (2007) A Markov random field model for network-based analysis of genomic data. Bioinformatics 23: 1537-1544.
    • (2007) Bioinformatics , vol.23 , pp. 1537-1544
    • Wei, Z.1    Li, H.2
  • 16
    • 69849086336 scopus 로고    scopus 로고
    • QUBIC: a qualitative biclustering algorithm for analyses of gene expression data
    • Li G, Ma Q, Tang H, Paterson AH, Xu Y, (2009) QUBIC: a qualitative biclustering algorithm for analyses of gene expression data. Nucleic Acids Res 37: e101.
    • (2009) Nucleic Acids Res , vol.37
    • Li, G.1    Ma, Q.2    Tang, H.3    Paterson, A.H.4    Xu, Y.5
  • 17
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
    • Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29.
    • (2000) Nat Genet , vol.25 , pp. 25-29
    • Ashburner, M.1    Ball, C.A.2    Blake, J.A.3    Botstein, D.4    Butler, H.5
  • 21
    • 80054854408 scopus 로고    scopus 로고
    • Phenotype-difference oriented identification of molecular functions for diabetes progression in Goto-Kakizaki rat; 2011
    • Piao G, Qian B, Saito S, Liu ZP, Zeng T,et al. Phenotype-difference oriented identification of molecular functions for diabetes progression in Goto-Kakizaki rat; 2011. IEEE pp. 111-116.
    • IEEE , pp. 111-116
    • Piao, G.1    Qian, B.2    Saito, S.3    Liu, Z.P.4    Zeng, T.5
  • 22
    • 33748701649 scopus 로고    scopus 로고
    • Detecting functional modules in the yeast protein-protein interaction network
    • Chen J, Yuan B, (2006) Detecting functional modules in the yeast protein-protein interaction network. Bioinformatics 22: 2283-2290.
    • (2006) Bioinformatics , vol.22 , pp. 2283-2290
    • Chen, J.1    Yuan, B.2
  • 23
    • 13244284551 scopus 로고    scopus 로고
    • Dynamic complex formation during the yeast cell cycle
    • de Lichtenberg U, Jensen LJ, Brunak S, Bork P, (2005) Dynamic complex formation during the yeast cell cycle. Science 307: 724-727.
    • (2005) Science , vol.307 , pp. 724-727
    • de Lichtenberg, U.1    Jensen, L.J.2    Brunak, S.3    Bork, P.4
  • 24
    • 0000801240 scopus 로고    scopus 로고
    • Discovering regulatory and signalling circuits in molecular interaction networks
    • Ideker T, Ozier O, Schwikowski B, Siegel AF, (2002) Discovering regulatory and signalling circuits in molecular interaction networks. Bioinformatics 18: S233-240.
    • (2002) Bioinformatics , vol.18
    • Ideker, T.1    Ozier, O.2    Schwikowski, B.3    Siegel, A.F.4
  • 25
    • 77955608634 scopus 로고    scopus 로고
    • Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana
    • Van Leene J, Hollunder J, Eeckhout D, Persiau G, Van De Slijke E, et al. (2010) Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Mol Syst Biol 6: 397.
    • (2010) Mol Syst Biol , vol.6 , pp. 397
    • van Leene, J.1    Hollunder, J.2    Eeckhout, D.3    Persiau, G.4    van de Slijke, E.5
  • 28
    • 33847352056 scopus 로고    scopus 로고
    • The cell cycle: principles of control: New Science Press
    • Morgan DO, (2007) The cell cycle: principles of control: New Science Press.
    • (2007)
    • Morgan, D.O.1
  • 29
    • 0036896774 scopus 로고    scopus 로고
    • Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle
    • Pramila T, Miles S, GuhaThakurta D, Jemiolo D, Breeden LL, (2002) Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle. Genes Dev 16: 3034-3045.
    • (2002) Genes Dev , vol.16 , pp. 3034-3045
    • Pramila, T.1    Miles, S.2    GuhaThakurta, D.3    Jemiolo, D.4    Breeden, L.L.5
  • 30
    • 45149097650 scopus 로고    scopus 로고
    • Global control of cell-cycle transcription by coupled CDK and network oscillators
    • Orlando DA, Lin CY, Bernard A, Wang JY, Socolar JE, et al. (2008) Global control of cell-cycle transcription by coupled CDK and network oscillators. Nature 453: 944-947.
    • (2008) Nature , vol.453 , pp. 944-947
    • Orlando, D.A.1    Lin, C.Y.2    Bernard, A.3    Wang, J.Y.4    Socolar, J.E.5
  • 31
    • 77956238040 scopus 로고    scopus 로고
    • A model of yeast cell-cycle regulation based on multisite phosphorylation
    • Barik D, Baumann WT, Paul MR, Novak B, Tyson JJ, (2010) A model of yeast cell-cycle regulation based on multisite phosphorylation. Mol Syst Biol 6: 405.
    • (2010) Mol Syst Biol , vol.6 , pp. 405
    • Barik, D.1    Baumann, W.T.2    Paul, M.R.3    Novak, B.4    Tyson, J.J.5
  • 34
    • 78649703966 scopus 로고    scopus 로고
    • Rewiring of genetic networks in response to DNA damage
    • Bandyopadhyay S, Mehta M, Kuo D, Sung MK, Chuang R, et al. (2010) Rewiring of genetic networks in response to DNA damage. Science 330: 1385-1389.
    • (2010) Science , vol.330 , pp. 1385-1389
    • Bandyopadhyay, S.1    Mehta, M.2    Kuo, D.3    Sung, M.K.4    Chuang, R.5
  • 35
    • 0037168646 scopus 로고    scopus 로고
    • A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage
    • Chang M, Bellaoui M, Boone C, Brown GW, (2002) A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage. Proc Natl Acad Sci U S A 99: 16934-16939.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 16934-16939
    • Chang, M.1    Bellaoui, M.2    Boone, C.3    Brown, G.W.4
  • 36
    • 33646748283 scopus 로고    scopus 로고
    • A systems approach to mapping DNA damage response pathways
    • Workman CT, Mak HC, McCuine S, Tagne JB, Agarwal M, et al. (2006) A systems approach to mapping DNA damage response pathways. Science 312: 1054-1059.
    • (2006) Science , vol.312 , pp. 1054-1059
    • Workman, C.T.1    Mak, H.C.2    McCuine, S.3    Tagne, J.B.4    Agarwal, M.5
  • 37
    • 0035805255 scopus 로고    scopus 로고
    • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
    • Ideker T, Thorsson V, Ranish JA, Christmas R, Buhler J, et al. (2001) Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science 292: 929-934.
    • (2001) Science , vol.292 , pp. 929-934
    • Ideker, T.1    Thorsson, V.2    Ranish, J.A.3    Christmas, R.4    Buhler, J.5
  • 38
    • 0042191693 scopus 로고    scopus 로고
    • ELG1, a yeast gene required for genome stability, forms a complex related to replication factor C
    • Ben-Aroya S, Koren A, Liefshitz B, Steinlauf R, Kupiec M, (2003) ELG1, a yeast gene required for genome stability, forms a complex related to replication factor C. Proc Natl Acad Sci U S A 100: 9906-9911.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 9906-9911
    • Ben-Aroya, S.1    Koren, A.2    Liefshitz, B.3    Steinlauf, R.4    Kupiec, M.5
  • 39
    • 0141504148 scopus 로고    scopus 로고
    • Elg1 forms an alternative PCNA-interacting RFC complex required to maintain genome stability
    • Kanellis P, Agyei R, Durocher D, (2003) Elg1 forms an alternative PCNA-interacting RFC complex required to maintain genome stability. Curr Biol 13: 1583-1595.
    • (2003) Curr Biol , vol.13 , pp. 1583-1595
    • Kanellis, P.1    Agyei, R.2    Durocher, D.3
  • 40
    • 0003549085 scopus 로고
    • Laboratory course manual for methods in yeast genetics
    • Sherman F, Fink GR, Hicks JB, (1986) Laboratory course manual for methods in yeast genetics.
    • (1986)
    • Sherman, F.1    Fink, G.R.2    Hicks, J.B.3
  • 42
    • 84864336915 scopus 로고    scopus 로고
    • Cell cycle analysis of budding yeast using SYTOX Green
    • Haase SB, (2003) Cell cycle analysis of budding yeast using SYTOX Green.
    • (2003)
    • Haase, S.B.1
  • 43
    • 85017284069 scopus 로고    scopus 로고
    • Yeast RNA isolation: small-scale
    • Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
    • Amberg D, Burke D, Strathern J, (2006) Yeast RNA isolation: small-scale. Cold Spring Harbor protocol. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY. doi.
    • (2006) Cold Spring Harbor protocol
    • Amberg, D.1    Burke, D.2    Strathern, J.3
  • 44
    • 0000959484 scopus 로고    scopus 로고
    • CLIFF: clustering of high-dimensional microarray data via iterative feature filtering using normalized cuts
    • Xing EP, Karp RM, (2001) CLIFF: clustering of high-dimensional microarray data via iterative feature filtering using normalized cuts. Bioinformatics 17: S306-315.
    • (2001) Bioinformatics , vol.17
    • Xing, E.P.1    Karp, R.M.2
  • 46
    • 0036529479 scopus 로고    scopus 로고
    • An efficient algorithm for large-scale detection of protein families
    • Enright AJ, Van Dongen S, Ouzounis CA, (2002) An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res 30: 1575-1584.
    • (2002) Nucleic Acids Res , vol.30 , pp. 1575-1584
    • Enright, A.J.1    Van Dongen, S.2    Ouzounis, C.A.3
  • 47
    • 53149135030 scopus 로고    scopus 로고
    • Mrc1 and DNA polymerase epsilon function together in linking DNA replication and the S phase checkpoint
    • Lou H, Komata M, Katou Y, Guan Z, Reis CC, et al. (2008) Mrc1 and DNA polymerase epsilon function together in linking DNA replication and the S phase checkpoint. Mol Cell 32: 106-117.
    • (2008) Mol Cell , vol.32 , pp. 106-117
    • Lou, H.1    Komata, M.2    Katou, Y.3    Guan, Z.4    Reis, C.C.5
  • 48
    • 58149102035 scopus 로고    scopus 로고
    • Yeast DNA replication protein Dpb11 activates the Mec1/ATR checkpoint kinase
    • Navadgi-Patil VM, Burgers PM, (2008) Yeast DNA replication protein Dpb11 activates the Mec1/ATR checkpoint kinase. J Biol Chem 283: 35853-35859.
    • (2008) J Biol Chem , vol.283 , pp. 35853-35859
    • Navadgi-Patil, V.M.1    Burgers, P.M.2
  • 49
    • 0025805542 scopus 로고
    • DPB2, the gene encoding DNA polymerase II subunit B, is required for chromosome replication in Saccharomyces cerevisiae
    • Araki H, Hamatake RK, Johnston LH, Sugino A, (1991) DPB2, the gene encoding DNA polymerase II subunit B, is required for chromosome replication in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 88: 4601-4605.
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 4601-4605
    • Araki, H.1    Hamatake, R.K.2    Johnston, L.H.3    Sugino, A.4
  • 50
    • 0037034048 scopus 로고    scopus 로고
    • S-Cdk-dependent phosphorylation of Sld2 essential for chromosomal DNA replication in budding yeast
    • Masumoto H, Muramatsu S, Kamimura Y, Araki H, (2002) S-Cdk-dependent phosphorylation of Sld2 essential for chromosomal DNA replication in budding yeast. Nature 415: 651-655.
    • (2002) Nature , vol.415 , pp. 651-655
    • Masumoto, H.1    Muramatsu, S.2    Kamimura, Y.3    Araki, H.4
  • 51
    • 0035931755 scopus 로고    scopus 로고
    • The Ndc80p complex from Saccharomyces cerevisiae contains conserved centromere components and has a function in chromosome segregation
    • Wigge PA, Kilmartin JV, (2001) The Ndc80p complex from Saccharomyces cerevisiae contains conserved centromere components and has a function in chromosome segregation. J Cell Biol 152: 349-360.
    • (2001) J Cell Biol , vol.152 , pp. 349-360
    • Wigge, P.A.1    Kilmartin, J.V.2
  • 52
    • 0242268461 scopus 로고    scopus 로고
    • Predicting protein functions from redundancies in large-scale protein interaction networks
    • Samanta MP, Liang S, (2003) Predicting protein functions from redundancies in large-scale protein interaction networks. Proc Natl Acad Sci U S A 100: 12579-12583.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 12579-12583
    • Samanta, M.P.1    Liang, S.2
  • 53
    • 0033167929 scopus 로고    scopus 로고
    • Structural maintenance of chromosomes (SMC) proteins: conserved molecular properties for multiple biological functions
    • Strunnikov AV, Jessberger R, (1999) Structural maintenance of chromosomes (SMC) proteins: conserved molecular properties for multiple biological functions. Eur J Biochem 263: 6-13.
    • (1999) Eur J Biochem , vol.263 , pp. 6-13
    • Strunnikov, A.V.1    Jessberger, R.2
  • 54
    • 68949149115 scopus 로고    scopus 로고
    • Direct Bre1-Paf1 complex interactions and RING finger-independent Bre1-Rad6 interactions mediate histone H2B ubiquitylation in yeast
    • Kim J, Roeder RG, (2009) Direct Bre1-Paf1 complex interactions and RING finger-independent Bre1-Rad6 interactions mediate histone H2B ubiquitylation in yeast. J Biol Chem 284: 20582-20592.
    • (2009) J Biol Chem , vol.284 , pp. 20582-20592
    • Kim, J.1    Roeder, R.G.2
  • 55
    • 34547571030 scopus 로고    scopus 로고
    • g:Profiler-a web-based toolset for functional profiling of gene lists from large-scale experiments
    • Reimand J, Kull M, Peterson H, Hansen J, Vilo J, (2007) g:Profiler-a web-based toolset for functional profiling of gene lists from large-scale experiments. Nucleic Acids Res 35: W193-200.
    • (2007) Nucleic Acids Res , vol.35
    • Reimand, J.1    Kull, M.2    Peterson, H.3    Hansen, J.4    Vilo, J.5
  • 56
    • 0035890135 scopus 로고    scopus 로고
    • The S. cerevisiae SET3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program
    • Pijnappel WW, Schaft D, Roguev A, Shevchenko A, Tekotte H, et al. (2001) The S. cerevisiae SET3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program. Genes Dev 15: 2991-3004.
    • (2001) Genes Dev , vol.15 , pp. 2991-3004
    • Pijnappel, W.W.1    Schaft, D.2    Roguev, A.3    Shevchenko, A.4    Tekotte, H.5
  • 57
    • 0032111444 scopus 로고    scopus 로고
    • Phosphatidylinositol(3)-phosphate signaling mediated by specific binding to RING FYVE domains
    • Burd CG, Emr SD, (1998) Phosphatidylinositol(3)-phosphate signaling mediated by specific binding to RING FYVE domains. Mol Cell 2: 157-162.
    • (1998) Mol Cell , vol.2 , pp. 157-162
    • Burd, C.G.1    Emr, S.D.2
  • 58
    • 4143069112 scopus 로고    scopus 로고
    • Discovery of cercosporamide, a known antifungal natural product, as a selective Pkc1 kinase inhibitor through high-throughput screening
    • Sussman A, Huss K, Chio LC, Heidler S, Shaw M, et al. (2004) Discovery of cercosporamide, a known antifungal natural product, as a selective Pkc1 kinase inhibitor through high-throughput screening. Eukaryot Cell 3: 932-943.
    • (2004) Eukaryot Cell , vol.3 , pp. 932-943
    • Sussman, A.1    Huss, K.2    Chio, L.C.3    Heidler, S.4    Shaw, M.5
  • 60
    • 0032547791 scopus 로고    scopus 로고
    • Identification of Kel1p, a kelch domain-containing protein involved in cell fusion and morphology in Saccharomyces cerevisiae
    • Philips J, Herskowitz I, (1998) Identification of Kel1p, a kelch domain-containing protein involved in cell fusion and morphology in Saccharomyces cerevisiae. J Cell Biol 143: 375-389.
    • (1998) J Cell Biol , vol.143 , pp. 375-389
    • Philips, J.1    Herskowitz, I.2
  • 61
    • 0036500159 scopus 로고    scopus 로고
    • The Ppz protein phosphatases are key regulators of K+ and pH homeostasis: implications for salt tolerance, cell wall integrity and cell cycle progression
    • Yenush L, Mulet JM, Arino J, Serrano R, (2002) The Ppz protein phosphatases are key regulators of K+ and pH homeostasis: implications for salt tolerance, cell wall integrity and cell cycle progression. EMBO J 21: 920-929.
    • (2002) EMBO J , vol.21 , pp. 920-929
    • Yenush, L.1    Mulet, J.M.2    Arino, J.3    Serrano, R.4
  • 63
    • 0027264558 scopus 로고
    • BUD2 encodes a GTPase-activating protein for Bud1/Rsr1 necessary for proper bud-site selection in yeast
    • Park HO, Chant J, Herskowitz I, (1993) BUD2 encodes a GTPase-activating protein for Bud1/Rsr1 necessary for proper bud-site selection in yeast. Nature 365: 269-274.
    • (1993) Nature , vol.365 , pp. 269-274
    • Park, H.O.1    Chant, J.2    Herskowitz, I.3
  • 64
    • 2442605728 scopus 로고    scopus 로고
    • TOR complex 1 includes a novel component, Tco89p (YPL180w), and cooperates with Ssd1p to maintain cellular integrity in Saccharomyces cerevisiae
    • Reinke A, Anderson S, McCaffery JM, Yates J 3rd, Aronova S, et al (2004) TOR complex 1 includes a novel component, Tco89p (YPL180w), and cooperates with Ssd1p to maintain cellular integrity in Saccharomyces cerevisiae. J Biol Chem 279: 14752-14762.
    • (2004) J Biol Chem , vol.279 , pp. 14752-14762
    • Reinke, A.1    Anderson, S.2    McCaffery, J.M.3    Yates 3rd, J.4    Aronova, S.5
  • 65
    • 0032191204 scopus 로고    scopus 로고
    • Cloning and characterization of the human and Caenorhabditis elegans homologs of the Saccharomyces cerevisiae MSH5 gene
    • Winand NJ, Panzer JA, Kolodner RD, (1998) Cloning and characterization of the human and Caenorhabditis elegans homologs of the Saccharomyces cerevisiae MSH5 gene. Genomics 53: 69-80.
    • (1998) Genomics , vol.53 , pp. 69-80
    • Winand, N.J.1    Panzer, J.A.2    Kolodner, R.D.3
  • 66
    • 0027326257 scopus 로고
    • Properties of Saccharomyces cerevisiae wee1 and its differential regulation of p34CDC28 in response to G1 and G2 cyclins
    • Booher RN, Deshaies RJ, Kirschner MW, (1993) Properties of Saccharomyces cerevisiae wee1 and its differential regulation of p34CDC28 in response to G1 and G2 cyclins. EMBO J 12: 3417-3426.
    • (1993) EMBO J , vol.12 , pp. 3417-3426
    • Booher, R.N.1    Deshaies, R.J.2    Kirschner, M.W.3
  • 68
    • 0035158034 scopus 로고    scopus 로고
    • Dynamic localization of the Swe1 regulator Hsl7 during the Saccharomyces cerevisiae cell cycle
    • Cid VJ, Shulewitz MJ, McDonald KL, Thorner J, (2001) Dynamic localization of the Swe1 regulator Hsl7 during the Saccharomyces cerevisiae cell cycle. Mol Biol Cell 12: 1645-1669.
    • (2001) Mol Biol Cell , vol.12 , pp. 1645-1669
    • Cid, V.J.1    Shulewitz, M.J.2    McDonald, K.L.3    Thorner, J.4
  • 69
    • 0030828138 scopus 로고    scopus 로고
    • Isolation of a putative prolyl-tRNA synthetase (CaPRS) gene from Candida albicans
    • Sentandreu M, Elorza MV, Sentandreu R, (1997) Isolation of a putative prolyl-tRNA synthetase (CaPRS) gene from Candida albicans. Yeast 13: 1375-1381.
    • (1997) Yeast , vol.13 , pp. 1375-1381
    • Sentandreu, M.1    Elorza, M.V.2    Sentandreu, R.3
  • 70
    • 3042569597 scopus 로고    scopus 로고
    • Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs
    • Yu H, Luscombe NM, Lu HX, Zhu X, Xia Y, et al. (2004) Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs. Genome Res 14: 1107-1118.
    • (2004) Genome Res , vol.14 , pp. 1107-1118
    • Yu, H.1    Luscombe, N.M.2    Lu, H.X.3    Zhu, X.4    Xia, Y.5
  • 71
    • 53349117774 scopus 로고    scopus 로고
    • High-quality binary protein interaction map of the yeast interactome network
    • Yu H, Braun P, Yildirim MA, Lemmens I, Venkatesan K, et al. (2008) High-quality binary protein interaction map of the yeast interactome network. Science 322: 104-110.
    • (2008) Science , vol.322 , pp. 104-110
    • Yu, H.1    Braun, P.2    Yildirim, M.A.3    Lemmens, I.4    Venkatesan, K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.