-
1
-
-
0034791090
-
Ubiquitin enters the new millennium
-
Pickart C.M. Ubiquitin enters the new millennium. Mol Cell 2001, 8:499-504.
-
(2001)
Mol Cell
, vol.8
, pp. 499-504
-
-
Pickart, C.M.1
-
3
-
-
20444404618
-
Regulated protein degradation
-
Varshavsky A. Regulated protein degradation. Trends Biochem Sci 2005, 30:283-286.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 283-286
-
-
Varshavsky, A.1
-
4
-
-
44649101850
-
Atypical ubiquitin chains: new molecular signals. 'Protein Modifications: Beyond the Usual Suspects' review series
-
Ikeda F., Dikic I. Atypical ubiquitin chains: new molecular signals. 'Protein Modifications: Beyond the Usual Suspects' review series. EMBO Rep 2008, 9:536-542.
-
(2008)
EMBO Rep
, vol.9
, pp. 536-542
-
-
Ikeda, F.1
Dikic, I.2
-
5
-
-
0041706156
-
A proteomics approach to understanding protein ubiquitination
-
Peng J., Schwartz D., Elias J.E., Thoreen C.C., Cheng D., Marsischky G., et al. A proteomics approach to understanding protein ubiquitination. Nat Biotechnol 2003, 21:921-926.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 921-926
-
-
Peng, J.1
Schwartz, D.2
Elias, J.E.3
Thoreen, C.C.4
Cheng, D.5
Marsischky, G.6
-
6
-
-
2342477917
-
The novel functions of ubiquitination in signaling
-
Sun L., Chen Z.J. The novel functions of ubiquitination in signaling. Curr Opin Cell Biol 2004, 16:119-126.
-
(2004)
Curr Opin Cell Biol
, vol.16
, pp. 119-126
-
-
Sun, L.1
Chen, Z.J.2
-
7
-
-
8844237615
-
Polyubiquitin chains: polymeric protein signals
-
Pickart C.M., Fushman D. Polyubiquitin chains: polymeric protein signals. Curr Opin Chem Biol 2004, 8:610-616.
-
(2004)
Curr Opin Chem Biol
, vol.8
, pp. 610-616
-
-
Pickart, C.M.1
Fushman, D.2
-
8
-
-
0035293622
-
Protein regulation by monoubiquitin
-
Hicke L. Protein regulation by monoubiquitin. Nat Rev Mol Cell Biol 2001, 2:195-201.
-
(2001)
Nat Rev Mol Cell Biol
, vol.2
, pp. 195-201
-
-
Hicke, L.1
-
10
-
-
40849106789
-
Histone ubiquitination: triggering gene activity
-
Weake V.M., Workman J.L. Histone ubiquitination: triggering gene activity. Mol Cell 2008, 29:653-663.
-
(2008)
Mol Cell
, vol.29
, pp. 653-663
-
-
Weake, V.M.1
Workman, J.L.2
-
11
-
-
33750023437
-
Keeping transcriptional activators under control
-
Kodadek T., Sikder D., Nalley K. Keeping transcriptional activators under control. Cell 2006, 127:261-264.
-
(2006)
Cell
, vol.127
, pp. 261-264
-
-
Kodadek, T.1
Sikder, D.2
Nalley, K.3
-
12
-
-
0030897031
-
Structure of 20S proteasome from yeast at 2.4A resolution
-
Groll M., Ditzel L., Lowe J., Stock D., Bochtler M., Bartunik H.D., et al. Structure of 20S proteasome from yeast at 2.4A resolution. Nature 1997, 386:463-471.
-
(1997)
Nature
, vol.386
, pp. 463-471
-
-
Groll, M.1
Ditzel, L.2
Lowe, J.3
Stock, D.4
Bochtler, M.5
Bartunik, H.D.6
-
13
-
-
1542344435
-
Proteasomes and their kin: proteases in the machine age
-
Pickart C.M., Cohen R.E. Proteasomes and their kin: proteases in the machine age. Nat Rev Mol Cell Biol 2004, 5:177-187.
-
(2004)
Nat Rev Mol Cell Biol
, vol.5
, pp. 177-187
-
-
Pickart, C.M.1
Cohen, R.E.2
-
14
-
-
65649115267
-
Recognition and processing of ubiquitin-protein conjugates by the proteasome
-
Finley D. Recognition and processing of ubiquitin-protein conjugates by the proteasome. Annu Rev Biochem 2009, 78:477-513.
-
(2009)
Annu Rev Biochem
, vol.78
, pp. 477-513
-
-
Finley, D.1
-
15
-
-
0028234770
-
Distinct 19 S and 20 S subcomplexes of the 26 S proteasome and their distribution in the nucleus and the cytoplasm
-
Peters J.M., Franke W.W., Kleinschmidt J.A. Distinct 19 S and 20 S subcomplexes of the 26 S proteasome and their distribution in the nucleus and the cytoplasm. J Biol Chem 1994, 269:7709-7718.
-
(1994)
J Biol Chem
, vol.269
, pp. 7709-7718
-
-
Peters, J.M.1
Franke, W.W.2
Kleinschmidt, J.A.3
-
16
-
-
0033176770
-
The base of the proteasome regulatory particle exhibits chaperone-like activity
-
Braun B.C., Glickman M., Kraft R., Dahlmann B., Kloetzel P.M., Finley D., et al. The base of the proteasome regulatory particle exhibits chaperone-like activity. Nat Cell Biol 1999, 1:221-226.
-
(1999)
Nat Cell Biol
, vol.1
, pp. 221-226
-
-
Braun, B.C.1
Glickman, M.2
Kraft, R.3
Dahlmann, B.4
Kloetzel, P.M.5
Finley, D.6
-
17
-
-
0037178895
-
Conformational remodeling of proteasomal substrates by PA700, the 19 S regulatory complex of the 26 S proteasome
-
Liu C.W., Millen L., Roman T.B., Xiong H., Gilbert H.F., Noiva R., et al. Conformational remodeling of proteasomal substrates by PA700, the 19 S regulatory complex of the 26 S proteasome. J Biol Chem 2002, 277:26815-26820.
-
(2002)
J Biol Chem
, vol.277
, pp. 26815-26820
-
-
Liu, C.W.1
Millen, L.2
Roman, T.B.3
Xiong, H.4
Gilbert, H.F.5
Noiva, R.6
-
18
-
-
33846132939
-
The role of the proteasomal ATPases and activator monoubiquitylation in regulating Gal4 binding to promoters
-
Ferdous A., Sikder D., Gillette T., Nalley K., Kodadek T., Johnston S.A. The role of the proteasomal ATPases and activator monoubiquitylation in regulating Gal4 binding to promoters. Genes Dev 2007, 21:112-123.
-
(2007)
Genes Dev
, vol.21
, pp. 112-123
-
-
Ferdous, A.1
Sikder, D.2
Gillette, T.3
Nalley, K.4
Kodadek, T.5
Johnston, S.A.6
-
19
-
-
0037134015
-
Recruitment of a 19S proteasome subcomplex to an activated promoter
-
Gonzalez F., Delahodde A., Kodadek T., Johnston S.A. Recruitment of a 19S proteasome subcomplex to an activated promoter. Science 2002, 296:548-550.
-
(2002)
Science
, vol.296
, pp. 548-550
-
-
Gonzalez, F.1
Delahodde, A.2
Kodadek, T.3
Johnston, S.A.4
-
20
-
-
27544486193
-
The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators
-
Lee D., Ezhkova E., Li B., Pattenden S.G., Tansey W.P., Workman J.L. The proteasome regulatory particle alters the SAGA coactivator to enhance its interactions with transcriptional activators. Cell 2005, 123:423-436.
-
(2005)
Cell
, vol.123
, pp. 423-436
-
-
Lee, D.1
Ezhkova, E.2
Li, B.3
Pattenden, S.G.4
Tansey, W.P.5
Workman, J.L.6
-
21
-
-
40149102342
-
The 19S proteasome ATPase Sug1 plays a critical role in regulating MHC class II transcription
-
Bhat K.P., Turner J.D., Myers S.E., Cape A.D., Ting J.P., Greer S.F. The 19S proteasome ATPase Sug1 plays a critical role in regulating MHC class II transcription. Mol Immunol 2008, 45:2214-2224.
-
(2008)
Mol Immunol
, vol.45
, pp. 2214-2224
-
-
Bhat, K.P.1
Turner, J.D.2
Myers, S.E.3
Cape, A.D.4
Ting, J.P.5
Greer, S.F.6
-
22
-
-
0032483546
-
A subcomplex of the proteasome regulatory particle required for ubiquitin-conjugate degradation and related to the COP9-signalosome and eIF3
-
Glickman M.H., Rubin D.M., Coux O., Wefes I., Pfeifer G., Cjeka Z., et al. A subcomplex of the proteasome regulatory particle required for ubiquitin-conjugate degradation and related to the COP9-signalosome and eIF3. Cell 1998, 94:615-623.
-
(1998)
Cell
, vol.94
, pp. 615-623
-
-
Glickman, M.H.1
Rubin, D.M.2
Coux, O.3
Wefes, I.4
Pfeifer, G.5
Cjeka, Z.6
-
23
-
-
44349116590
-
Proteasome subunit Rpn13 is a novel ubiquitin receptor
-
Husnjak K., Elsasser S., Zhang N., Chen X., Randles L., Shi Y., et al. Proteasome subunit Rpn13 is a novel ubiquitin receptor. Nature 2008, 453:481-488.
-
(2008)
Nature
, vol.453
, pp. 481-488
-
-
Husnjak, K.1
Elsasser, S.2
Zhang, N.3
Chen, X.4
Randles, L.5
Shi, Y.6
-
24
-
-
44349094727
-
Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction
-
Schreiner P., Chen X., Husnjak K., Randles L., Zhang N., Elsasser S., et al. Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction. Nature 2008, 453:548-552.
-
(2008)
Nature
, vol.453
, pp. 548-552
-
-
Schreiner, P.1
Chen, X.2
Husnjak, K.3
Randles, L.4
Zhang, N.5
Elsasser, S.6
-
25
-
-
2642544592
-
Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter
-
Metivier R., Penot G., Hubner M.R., Reid G., Brand H., Kos M., et al. Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter. Cell 2003, 115:751-763.
-
(2003)
Cell
, vol.115
, pp. 751-763
-
-
Metivier, R.1
Penot, G.2
Hubner, M.R.3
Reid, G.4
Brand, H.5
Kos, M.6
-
26
-
-
0034641615
-
Activation of HIF1alpha ubiquitination by a reconstituted von Hippel-Lindau (VHL) tumor suppressor complex
-
Kamura T., Sato S., Iwai K., Czyzyk-Krzeska M., Conaway R.C., Conaway J.W. Activation of HIF1alpha ubiquitination by a reconstituted von Hippel-Lindau (VHL) tumor suppressor complex. Proc Natl Acad Sci U S A 2000, 97:10430-10435.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 10430-10435
-
-
Kamura, T.1
Sato, S.2
Iwai, K.3
Czyzyk-Krzeska, M.4
Conaway, R.C.5
Conaway, J.W.6
-
27
-
-
0033571527
-
Proteasome-mediated degradation of transcriptional activators correlates with activation domain potency in vivo
-
Molinari E., Gilman M., Natesan S. Proteasome-mediated degradation of transcriptional activators correlates with activation domain potency in vivo. EMBO J 1999, 18:6439-6447.
-
(1999)
EMBO J
, vol.18
, pp. 6439-6447
-
-
Molinari, E.1
Gilman, M.2
Natesan, S.3
-
28
-
-
0037335034
-
How the ubiquitin-proteasome system controls transcription
-
Muratani M., Tansey W.P. How the ubiquitin-proteasome system controls transcription. Nat Rev Mol Cell Biol 2003, 4:192-201.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 192-201
-
-
Muratani, M.1
Tansey, W.P.2
-
29
-
-
0034724166
-
Functional overlap of sequences that activate transcription and signal ubiquitin-mediated proteolysis
-
Salghetti S.E., Muratani M., Wijnen H., Futcher B., Tansey W.P. Functional overlap of sequences that activate transcription and signal ubiquitin-mediated proteolysis. Proc Natl Acad Sci U S A 2000, 97:3118-3123.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 3118-3123
-
-
Salghetti, S.E.1
Muratani, M.2
Wijnen, H.3
Futcher, B.4
Tansey, W.P.5
-
30
-
-
27744495040
-
A putative stimulatory role for activator turnover in gene expression
-
Lipford J.R., Smith G.T., Chi Y., Deshaies R.J. A putative stimulatory role for activator turnover in gene expression. Nature 2005, 438:113-116.
-
(2005)
Nature
, vol.438
, pp. 113-116
-
-
Lipford, J.R.1
Smith, G.T.2
Chi, Y.3
Deshaies, R.J.4
-
31
-
-
17644386183
-
The F box protein Dsg1/Mdm30 is a transcriptional coactivator that stimulates Gal4 turnover and cotranscriptional mRNA processing
-
Muratani M., Kung C., Shokat K.M., Tansey W.P. The F box protein Dsg1/Mdm30 is a transcriptional coactivator that stimulates Gal4 turnover and cotranscriptional mRNA processing. Cell 2005, 120:887-899.
-
(2005)
Cell
, vol.120
, pp. 887-899
-
-
Muratani, M.1
Kung, C.2
Shokat, K.M.3
Tansey, W.P.4
-
32
-
-
0037648338
-
Skp2 regulates Myc protein stability and activity
-
Kim S.Y., Herbst A., Tworkowski K.A., Salghetti S.E., Tansey W.P. Skp2 regulates Myc protein stability and activity. Mol Cell 2003, 11:1177-1188.
-
(2003)
Mol Cell
, vol.11
, pp. 1177-1188
-
-
Kim, S.Y.1
Herbst, A.2
Tworkowski, K.A.3
Salghetti, S.E.4
Tansey, W.P.5
-
33
-
-
0037351881
-
Cyclic, proteasome-mediated turnover of unliganded and liganded ERalpha on responsive promoters is an integral feature of estrogen signaling
-
Reid G., Hubner M.R., Metivier R., Brand H., Denger S., Manu D., et al. Cyclic, proteasome-mediated turnover of unliganded and liganded ERalpha on responsive promoters is an integral feature of estrogen signaling. Mol Cell 2003, 11:695-707.
-
(2003)
Mol Cell
, vol.11
, pp. 695-707
-
-
Reid, G.1
Hubner, M.R.2
Metivier, R.3
Brand, H.4
Denger, S.5
Manu, D.6
-
34
-
-
12444264823
-
The F-box protein Skp2 participates in c-Myc proteosomal degradation and acts as a cofactor for c-Myc-regulated transcription
-
von der Lehr N., Johansson S., Wu S., Bahram F., Castell A., Cetinkaya C., et al. The F-box protein Skp2 participates in c-Myc proteosomal degradation and acts as a cofactor for c-Myc-regulated transcription. Mol Cell 2003, 11:1189-1200.
-
(2003)
Mol Cell
, vol.11
, pp. 1189-1200
-
-
von der Lehr, N.1
Johansson, S.2
Wu, S.3
Bahram, F.4
Castell, A.5
Cetinkaya, C.6
-
35
-
-
77953322730
-
Proteolytic instability and the action of nonclassical transcriptional activators
-
Wang X., Muratani M., Tansey W.P., Ptashne M. Proteolytic instability and the action of nonclassical transcriptional activators. Curr Biol 2010, 20:868-871.
-
(2010)
Curr Biol
, vol.20
, pp. 868-871
-
-
Wang, X.1
Muratani, M.2
Tansey, W.P.3
Ptashne, M.4
-
36
-
-
0033279836
-
SCF and Cullin/Ring H2-based ubiquitin ligases
-
Deshaies R.J. SCF and Cullin/Ring H2-based ubiquitin ligases. Annu Rev Cell Dev Biol 1999, 15:435-467.
-
(1999)
Annu Rev Cell Dev Biol
, vol.15
, pp. 435-467
-
-
Deshaies, R.J.1
-
37
-
-
2942650133
-
The Fbw7 tumor suppressor regulates glycogen synthase kinase 3 phosphorylation-dependent c-Myc protein degradation
-
Welcker M., Orian A., Jin J., Grim J.E., Harper J.W., Eisenman R.N., et al. The Fbw7 tumor suppressor regulates glycogen synthase kinase 3 phosphorylation-dependent c-Myc protein degradation. Proc Natl Acad Sci U S A 2004, 101:9085-9090.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 9085-9090
-
-
Welcker, M.1
Orian, A.2
Jin, J.3
Grim, J.E.4
Harper, J.W.5
Eisenman, R.N.6
-
38
-
-
2942614705
-
Phosphorylation-dependent degradation of c-Myc is mediated by the F-box protein Fbw7
-
Yada M., Hatakeyama S., Kamura T., Nishiyama M., Tsunematsu R., Imaki H., et al. Phosphorylation-dependent degradation of c-Myc is mediated by the F-box protein Fbw7. EMBO J 2004, 23:2116-2125.
-
(2004)
EMBO J
, vol.23
, pp. 2116-2125
-
-
Yada, M.1
Hatakeyama, S.2
Kamura, T.3
Nishiyama, M.4
Tsunematsu, R.5
Imaki, H.6
-
39
-
-
0035339092
-
Negative regulation of Gcn4 and Msn2 transcription factors by Srb10 cyclin-dependent kinase
-
Chi Y., Huddleston M.J., Zhang X., Young R.A., Annan R.S., Carr S.A., et al. Negative regulation of Gcn4 and Msn2 transcription factors by Srb10 cyclin-dependent kinase. Genes Dev 2001, 15:1078-1092.
-
(2001)
Genes Dev
, vol.15
, pp. 1078-1092
-
-
Chi, Y.1
Huddleston, M.J.2
Zhang, X.3
Young, R.A.4
Annan, R.S.5
Carr, S.A.6
-
40
-
-
52049114924
-
Physical and functional interactions of monoubiquitylated transactivators with the proteasome
-
Archer C.T., Burdine L., Liu B., Ferdous A., Johnston S.A., Kodadek T. Physical and functional interactions of monoubiquitylated transactivators with the proteasome. J Biol Chem 2008, 283:21789-21798.
-
(2008)
J Biol Chem
, vol.283
, pp. 21789-21798
-
-
Archer, C.T.1
Burdine, L.2
Liu, B.3
Ferdous, A.4
Johnston, S.A.5
Kodadek, T.6
-
41
-
-
0042195822
-
A non-proteolytic role for ubiquitin in Tat-mediated transactivation of the HIV-1 promoter
-
Bres V., Kiernan R.E., Linares L.K., Chable-Bessia C., Plechakova O., Treand C., et al. A non-proteolytic role for ubiquitin in Tat-mediated transactivation of the HIV-1 promoter. Nat Cell Biol 2003, 5:754-761.
-
(2003)
Nat Cell Biol
, vol.5
, pp. 754-761
-
-
Bres, V.1
Kiernan, R.E.2
Linares, L.K.3
Chable-Bessia, C.4
Plechakova, O.5
Treand, C.6
-
42
-
-
78650515835
-
The E3 ubiquitin ligase Wwp2 regulates craniofacial development through mono-ubiquitylation of Goosecoid
-
Zou W., Chen X., Shim J.H., Huang Z., Brady N., Hu D., et al. The E3 ubiquitin ligase Wwp2 regulates craniofacial development through mono-ubiquitylation of Goosecoid. Nat Cell Biol 2011, 13:59-65.
-
(2011)
Nat Cell Biol
, vol.13
, pp. 59-65
-
-
Zou, W.1
Chen, X.2
Shim, J.H.3
Huang, Z.4
Brady, N.5
Hu, D.6
-
43
-
-
0035979738
-
Regulation of transcriptional activation domain function by ubiquitin
-
Salghetti S.E., Caudy A.A., Chenoweth J.G., Tansey W.P. Regulation of transcriptional activation domain function by ubiquitin. Science 2001, 293:1651-1653.
-
(2001)
Science
, vol.293
, pp. 1651-1653
-
-
Salghetti, S.E.1
Caudy, A.A.2
Chenoweth, J.G.3
Tansey, W.P.4
-
44
-
-
45549098595
-
Activation domain-dependent monoubiquitylation of Gal4 protein is essential for promoter binding in vivo
-
Archer C.T., Delahodde A., Gonzalez F., Johnston S.A., Kodadek T. Activation domain-dependent monoubiquitylation of Gal4 protein is essential for promoter binding in vivo. J Biol Chem 2008, 283:12614-12623.
-
(2008)
J Biol Chem
, vol.283
, pp. 12614-12623
-
-
Archer, C.T.1
Delahodde, A.2
Gonzalez, F.3
Johnston, S.A.4
Kodadek, T.5
-
45
-
-
77950342666
-
The hydrophobic patch of ubiquitin is required to protect transactivator-promoter complexes from destabilization by the proteasomal ATPases
-
Archer C.T., Kodadek T. The hydrophobic patch of ubiquitin is required to protect transactivator-promoter complexes from destabilization by the proteasomal ATPases. Nucleic Acids Res 2009.
-
(2009)
Nucleic Acids Res
-
-
Archer, C.T.1
Kodadek, T.2
-
46
-
-
33748331286
-
Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo
-
Nalley K., Johnston S.A., Kodadek T. Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo. Nature 2006, 442:1054-1057.
-
(2006)
Nature
, vol.442
, pp. 1054-1057
-
-
Nalley, K.1
Johnston, S.A.2
Kodadek, T.3
-
48
-
-
58149357528
-
Phosphorylation of the Gal4 DNA-binding domain is essential for activator mono-ubiquitylation and efficient promoter occupancy
-
Ferdous A., O'Neal M., Nalley K., Sikder D., Kodadek T., Johnston S.A. Phosphorylation of the Gal4 DNA-binding domain is essential for activator mono-ubiquitylation and efficient promoter occupancy. Mol Biosyst 2008, 4:1116-1125.
-
(2008)
Mol Biosyst
, vol.4
, pp. 1116-1125
-
-
Ferdous, A.1
O'Neal, M.2
Nalley, K.3
Sikder, D.4
Kodadek, T.5
Johnston, S.A.6
-
49
-
-
79251596169
-
Proteolytic and non-proteolytic roles of ubiquitin and the ubiquitin proteasome system in transcriptional regulation
-
Bhat K.P., Greer S.F. Proteolytic and non-proteolytic roles of ubiquitin and the ubiquitin proteasome system in transcriptional regulation. Biochim Biophys Acta 2011, 1809:150-155.
-
(2011)
Biochim Biophys Acta
, vol.1809
, pp. 150-155
-
-
Bhat, K.P.1
Greer, S.F.2
-
50
-
-
33748753648
-
Widespread, but non-identical, association of proteasomal 19 and 20 S proteins with yeast chromatin
-
Sikder D., Johnston S.A., Kodadek T. Widespread, but non-identical, association of proteasomal 19 and 20 S proteins with yeast chromatin. J Biol Chem 2006, 281:27346-27355.
-
(2006)
J Biol Chem
, vol.281
, pp. 27346-27355
-
-
Sikder, D.1
Johnston, S.A.2
Kodadek, T.3
-
51
-
-
1942437536
-
Physical and functional association of RNA polymerase II and the proteasome
-
Gillette T.G., Gonzalez F., Delahodde A., Johnston S.A., Kodadek T. Physical and functional association of RNA polymerase II and the proteasome. Proc Natl Acad Sci U S A 2004, 101:5904-5909.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 5904-5909
-
-
Gillette, T.G.1
Gonzalez, F.2
Delahodde, A.3
Johnston, S.A.4
Kodadek, T.5
-
52
-
-
33644857820
-
Genomic association of the proteasome demonstrates overlapping gene regulatory activity with transcription factor substrates
-
Auld K.L., Brown C.R., Casolari J.M., Komili S., Silver P.A. Genomic association of the proteasome demonstrates overlapping gene regulatory activity with transcription factor substrates. Mol Cell 2006, 21:861-871.
-
(2006)
Mol Cell
, vol.21
, pp. 861-871
-
-
Auld, K.L.1
Brown, C.R.2
Casolari, J.M.3
Komili, S.4
Silver, P.A.5
-
53
-
-
72149121113
-
The 19s proteasome subcomplex establishes a specific protein interaction network at the promoter for stimulated transcriptional initiation in vivo
-
Malik S., Shukla A., Sen P., Bhaumik S.R. The 19s proteasome subcomplex establishes a specific protein interaction network at the promoter for stimulated transcriptional initiation in vivo. J Biol Chem 2009, 284:35714-35724.
-
(2009)
J Biol Chem
, vol.284
, pp. 35714-35724
-
-
Malik, S.1
Shukla, A.2
Sen, P.3
Bhaumik, S.R.4
-
54
-
-
0035947238
-
The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II
-
Ferdous A., Gonzalez F., Sun L., Kodadek T., Johnston S.A. The 19S regulatory particle of the proteasome is required for efficient transcription elongation by RNA polymerase II. Mol Cell 2001, 7:981-991.
-
(2001)
Mol Cell
, vol.7
, pp. 981-991
-
-
Ferdous, A.1
Gonzalez, F.2
Sun, L.3
Kodadek, T.4
Johnston, S.A.5
-
55
-
-
0042304165
-
Cks1-dependent proteasome recruitment and activation of CDC20 transcription in budding yeast
-
Morris M.C., Kaiser P., Rudyak S., Baskerville C., Watson M.H., Reed S.I. Cks1-dependent proteasome recruitment and activation of CDC20 transcription in budding yeast. Nature 2003, 423:1009-1013.
-
(2003)
Nature
, vol.423
, pp. 1009-1013
-
-
Morris, M.C.1
Kaiser, P.2
Rudyak, S.3
Baskerville, C.4
Watson, M.H.5
Reed, S.I.6
-
56
-
-
33846658069
-
The proteasome regulates HIV-1 transcription by both proteolytic and nonproteolytic mechanisms
-
Lassot I., Latreille D., Rousset E., Sourisseau M., Linares L.K., Chable-Bessia C., et al. The proteasome regulates HIV-1 transcription by both proteolytic and nonproteolytic mechanisms. Mol Cell 2007, 25:369-383.
-
(2007)
Mol Cell
, vol.25
, pp. 369-383
-
-
Lassot, I.1
Latreille, D.2
Rousset, E.3
Sourisseau, M.4
Linares, L.K.5
Chable-Bessia, C.6
-
57
-
-
76049086964
-
Dissection of combinatorial control by the Met4 transcriptional complex
-
Lee T.A., Jorgensen P., Bognar A.L., Peyraud C., Thomas D., Tyers M. Dissection of combinatorial control by the Met4 transcriptional complex. Mol Biol Cell 2010, 21:456-469.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 456-469
-
-
Lee, T.A.1
Jorgensen, P.2
Bognar, A.L.3
Peyraud, C.4
Thomas, D.5
Tyers, M.6
-
58
-
-
0036348150
-
Dual regulation of the met4 transcription factor by ubiquitin-dependent degradation and inhibition of promoter recruitment
-
Kuras L., Rouillon A., Lee T., Barbey R., Tyers M., Thomas D. Dual regulation of the met4 transcription factor by ubiquitin-dependent degradation and inhibition of promoter recruitment. Mol Cell 2002, 10:69-80.
-
(2002)
Mol Cell
, vol.10
, pp. 69-80
-
-
Kuras, L.1
Rouillon, A.2
Lee, T.3
Barbey, R.4
Tyers, M.5
Thomas, D.6
-
59
-
-
0034677224
-
Feedback-regulated degradation of the transcriptional activator Met4 is triggered by the SCF(Met30) complex
-
Rouillon A., Barbey R., Patton E.E., Tyers M., Thomas D. Feedback-regulated degradation of the transcriptional activator Met4 is triggered by the SCF(Met30) complex. EMBO J 2000, 19:282-294.
-
(2000)
EMBO J
, vol.19
, pp. 282-294
-
-
Rouillon, A.1
Barbey, R.2
Patton, E.E.3
Tyers, M.4
Thomas, D.5
-
60
-
-
33744967943
-
A ubiquitin-interacting motif protects polyubiquitinated Met4 from degradation by the 26S proteasome
-
Flick K., Raasi S., Zhang H., Yen J.L., Kaiser P. A ubiquitin-interacting motif protects polyubiquitinated Met4 from degradation by the 26S proteasome. Nat Cell Biol 2006, 8:509-515.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 509-515
-
-
Flick, K.1
Raasi, S.2
Zhang, H.3
Yen, J.L.4
Kaiser, P.5
-
61
-
-
0034604341
-
Regulation of transcription by ubiquitination without proteolysis: Cdc34/SCF(Met30)-mediated inactivation of the transcription factor Met4
-
Kaiser P., Flick K., Wittenberg C., Reed S.I. Regulation of transcription by ubiquitination without proteolysis: Cdc34/SCF(Met30)-mediated inactivation of the transcription factor Met4. Cell 2000, 102:303-314.
-
(2000)
Cell
, vol.102
, pp. 303-314
-
-
Kaiser, P.1
Flick, K.2
Wittenberg, C.3
Reed, S.I.4
-
62
-
-
78650534710
-
Physiologically relevant and portable tandem ubiquitin-binding domain stabilizes polyubiquitylated proteins
-
Tyrrell A., Flick K., Kleiger G., Zhang H., Deshaies R.J., Kaiser P. Physiologically relevant and portable tandem ubiquitin-binding domain stabilizes polyubiquitylated proteins. Proc Natl Acad Sci U S A 2010, 107:19796-19801.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 19796-19801
-
-
Tyrrell, A.1
Flick, K.2
Kleiger, G.3
Zhang, H.4
Deshaies, R.J.5
Kaiser, P.6
-
63
-
-
34247096165
-
Contending with transcriptional arrest during RNAPII transcript elongation
-
Svejstrup J.Q. Contending with transcriptional arrest during RNAPII transcript elongation. Trends Biochem Sci 2007, 32:165-171.
-
(2007)
Trends Biochem Sci
, vol.32
, pp. 165-171
-
-
Svejstrup, J.Q.1
-
64
-
-
0141785208
-
Running with RNA polymerase: eukaryotic transcript elongation
-
Arndt K.M., Kane C.M. Running with RNA polymerase: eukaryotic transcript elongation. Trends Genet 2003, 19:543-550.
-
(2003)
Trends Genet
, vol.19
, pp. 543-550
-
-
Arndt, K.M.1
Kane, C.M.2
-
65
-
-
0037073048
-
Promoting elongation with transcript cleavage stimulatory factors
-
Fish R.N., Kane C.M. Promoting elongation with transcript cleavage stimulatory factors. Biochim Biophys Acta 2002, 1577:287-307.
-
(2002)
Biochim Biophys Acta
, vol.1577
, pp. 287-307
-
-
Fish, R.N.1
Kane, C.M.2
-
66
-
-
0032827035
-
Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae
-
Beaudenon S.L., Huacani M.R., Wang G., McDonnell D.P., Huibregtse J.M. Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae. Mol Cell Biol 1999, 19:6972-6979.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 6972-6979
-
-
Beaudenon, S.L.1
Huacani, M.R.2
Wang, G.3
McDonnell, D.P.4
Huibregtse, J.M.5
-
67
-
-
0030888109
-
The large subunit of RNA polymerase II is a substrate of the Rsp5 ubiquitin-protein ligase
-
Huibregtse J.M., Yang J.C., Beaudenon S.L. The large subunit of RNA polymerase II is a substrate of the Rsp5 ubiquitin-protein ligase. Proc Natl Acad Sci U S A 1997, 94:3656-3661.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 3656-3661
-
-
Huibregtse, J.M.1
Yang, J.C.2
Beaudenon, S.L.3
-
68
-
-
0029859295
-
UV-induced ubiquitination of RNA polymerase II: a novel modification deficient in Cockayne syndrome cells
-
Bregman D.B., Halaban R., van Gool A.J., Henning K.A., Friedberg E.C., Warren S.L. UV-induced ubiquitination of RNA polymerase II: a novel modification deficient in Cockayne syndrome cells. Proc Natl Acad Sci U S A 1996, 93:11586-11590.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 11586-11590
-
-
Bregman, D.B.1
Halaban, R.2
van Gool, A.J.3
Henning, K.A.4
Friedberg, E.C.5
Warren, S.L.6
-
69
-
-
0037148786
-
A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage
-
Woudstra E.C., Gilbert C., Fellows J., Jansen L., Brouwer J., Erdjument-Bromage H., et al. A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage. Nature 2002, 415:929-933.
-
(2002)
Nature
, vol.415
, pp. 929-933
-
-
Woudstra, E.C.1
Gilbert, C.2
Fellows, J.3
Jansen, L.4
Brouwer, J.5
Erdjument-Bromage, H.6
-
70
-
-
20444428382
-
Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest
-
Somesh B.P., Reid J., Liu W.F., Sogaard T.M., Erdjument-Bromage H., Tempst P., et al. Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest. Cell 2005, 121:913-923.
-
(2005)
Cell
, vol.121
, pp. 913-923
-
-
Somesh, B.P.1
Reid, J.2
Liu, W.F.3
Sogaard, T.M.4
Erdjument-Bromage, H.5
Tempst, P.6
-
71
-
-
33947720525
-
Communication between distant sites in RNA polymerase II through ubiquitylation factors and the polymerase CTD
-
Somesh B.P., Sigurdsson S., Saeki H., Erdjument-Bromage H., Tempst P., Svejstrup J.Q. Communication between distant sites in RNA polymerase II through ubiquitylation factors and the polymerase CTD. Cell 2007, 129:57-68.
-
(2007)
Cell
, vol.129
, pp. 57-68
-
-
Somesh, B.P.1
Sigurdsson, S.2
Saeki, H.3
Erdjument-Bromage, H.4
Tempst, P.5
Svejstrup, J.Q.6
-
72
-
-
73949101221
-
Distinct ubiquitin ligases act sequentially for RNA polymerase II polyubiquitylation
-
Harreman M., Taschner M., Sigurdsson S., Anindya R., Reid J., Somesh B., et al. Distinct ubiquitin ligases act sequentially for RNA polymerase II polyubiquitylation. Proc Natl Acad Sci U S A 2009, 106:20705-20710.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 20705-20710
-
-
Harreman, M.1
Taschner, M.2
Sigurdsson, S.3
Anindya, R.4
Reid, J.5
Somesh, B.6
-
73
-
-
43449113530
-
Reversal of RNA polymerase II ubiquitylation by the ubiquitin protease Ubp3
-
Kvint K., Uhler J.P., Taschner M.J., Sigurdsson S., Erdjument-Bromage H., Tempst P., et al. Reversal of RNA polymerase II ubiquitylation by the ubiquitin protease Ubp3. Mol Cell 2008, 30:498-506.
-
(2008)
Mol Cell
, vol.30
, pp. 498-506
-
-
Kvint, K.1
Uhler, J.P.2
Taschner, M.J.3
Sigurdsson, S.4
Erdjument-Bromage, H.5
Tempst, P.6
-
74
-
-
0034659266
-
A putative ubiquitin ligase required for efficient mRNA export differentially affects hnRNP transport
-
Duncan K., Umen J.G., Guthrie C. A putative ubiquitin ligase required for efficient mRNA export differentially affects hnRNP transport. Curr Biol 2000, 10:687-696.
-
(2000)
Curr Biol
, vol.10
, pp. 687-696
-
-
Duncan, K.1
Umen, J.G.2
Guthrie, C.3
-
75
-
-
0032988745
-
Yeast tom1 mutant exhibits pleiotropic defects in nuclear division, maintenance of nuclear structure and nucleocytoplasmic transport at high temperatures
-
Utsugi T., Hirata A., Sekiguchi Y., Sasaki T., Toh-e A., Kikuchi Y. Yeast tom1 mutant exhibits pleiotropic defects in nuclear division, maintenance of nuclear structure and nucleocytoplasmic transport at high temperatures. Gene 1999, 234:285-295.
-
(1999)
Gene
, vol.234
, pp. 285-295
-
-
Utsugi, T.1
Hirata, A.2
Sekiguchi, Y.3
Sasaki, T.4
Toh-e, A.5
Kikuchi, Y.6
-
76
-
-
0042812051
-
The HECT ubiquitin ligase Rsp5p is required for proper nuclear export of mRNA in Saccharomyces cerevisiae
-
Rodriguez M.S., Gwizdek C., Haguenauer-Tsapis R., Dargemont C. The HECT ubiquitin ligase Rsp5p is required for proper nuclear export of mRNA in Saccharomyces cerevisiae. Traffic 2003, 4:566-575.
-
(2003)
Traffic
, vol.4
, pp. 566-575
-
-
Rodriguez, M.S.1
Gwizdek, C.2
Haguenauer-Tsapis, R.3
Dargemont, C.4
-
77
-
-
0346460009
-
Formation and nuclear export of tRNA, rRNA and mRNA is regulated by the ubiquitin ligase Rsp5p
-
Neumann S., Petfalski E., Brugger B., Grosshans H., Wieland F., Tollervey D., et al. Formation and nuclear export of tRNA, rRNA and mRNA is regulated by the ubiquitin ligase Rsp5p. EMBO Rep 2003, 4:1156-1162.
-
(2003)
EMBO Rep
, vol.4
, pp. 1156-1162
-
-
Neumann, S.1
Petfalski, E.2
Brugger, B.3
Grosshans, H.4
Wieland, F.5
Tollervey, D.6
-
78
-
-
17144370940
-
The mRNA nuclear export factor Hpr1 is regulated by Rsp5-mediated ubiquitylation
-
Gwizdek C., Hobeika M., Kus B., Ossareh-Nazari B., Dargemont C., Rodriguez M.S. The mRNA nuclear export factor Hpr1 is regulated by Rsp5-mediated ubiquitylation. J Biol Chem 2005, 280:13401-13405.
-
(2005)
J Biol Chem
, vol.280
, pp. 13401-13405
-
-
Gwizdek, C.1
Hobeika, M.2
Kus, B.3
Ossareh-Nazari, B.4
Dargemont, C.5
Rodriguez, M.S.6
-
79
-
-
66349132271
-
Roles of the TREX complex in nuclear export of mRNA
-
Katahira J., Yoneda Y. Roles of the TREX complex in nuclear export of mRNA. RNA Biol 2009, 6:149-152.
-
(2009)
RNA Biol
, vol.6
, pp. 149-152
-
-
Katahira, J.1
Yoneda, Y.2
-
80
-
-
33750801564
-
Ubiquitin-associated domain of Mex67 synchronizes recruitment of the mRNA export machinery with transcription
-
Gwizdek C., Iglesias N., Rodriguez M.S., Ossareh-Nazari B., Hobeika M., Divita G., et al. Ubiquitin-associated domain of Mex67 synchronizes recruitment of the mRNA export machinery with transcription. Proc Natl Acad Sci U S A 2006, 103:16376-16381.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 16376-16381
-
-
Gwizdek, C.1
Iglesias, N.2
Rodriguez, M.S.3
Ossareh-Nazari, B.4
Hobeika, M.5
Divita, G.6
-
81
-
-
34347392564
-
Coordination of Hpr1 and ubiquitin binding by the UBA domain of the mRNA export factor Mex67
-
Hobeika M., Brockmann C., Iglesias N., Gwizdek C., Neuhaus D., Stutz F., et al. Coordination of Hpr1 and ubiquitin binding by the UBA domain of the mRNA export factor Mex67. Mol Biol Cell 2007, 18:2561-2568.
-
(2007)
Mol Biol Cell
, vol.18
, pp. 2561-2568
-
-
Hobeika, M.1
Brockmann, C.2
Iglesias, N.3
Gwizdek, C.4
Neuhaus, D.5
Stutz, F.6
-
82
-
-
77956277960
-
Ubiquitin-mediated mRNP dynamics and surveillance prior to budding yeast mRNA export
-
Iglesias N., Tutucci E., Gwizdek C., Vinciguerra P., Von Dach E., Corbett A.H., et al. Ubiquitin-mediated mRNP dynamics and surveillance prior to budding yeast mRNA export. Genes Dev 2010, 24:1927-1938.
-
(2010)
Genes Dev
, vol.24
, pp. 1927-1938
-
-
Iglesias, N.1
Tutucci, E.2
Gwizdek, C.3
Vinciguerra, P.4
Von Dach, E.5
Corbett, A.H.6
-
83
-
-
67650543863
-
Structural requirements for the ubiquitin-associated domain of the mRNA export factor Mex67 to bind its specific targets, the transcription elongation THO complex component Hpr1 and nucleoporin FXFG repeats
-
Hobeika M., Brockmann C., Gruessing F., Neuhaus D., Divita G., Stewart M., et al. Structural requirements for the ubiquitin-associated domain of the mRNA export factor Mex67 to bind its specific targets, the transcription elongation THO complex component Hpr1 and nucleoporin FXFG repeats. J Biol Chem 2009, 284:17575-17583.
-
(2009)
J Biol Chem
, vol.284
, pp. 17575-17583
-
-
Hobeika, M.1
Brockmann, C.2
Gruessing, F.3
Neuhaus, D.4
Divita, G.5
Stewart, M.6
-
84
-
-
0034791334
-
Distinct RNP complexes of shuttling hnRNP proteins with pre-mRNA and mRNA: candidate intermediates in formation and export of mRNA
-
Mili S., Shu H.J., Zhao Y., Pinol-Roma S. Distinct RNP complexes of shuttling hnRNP proteins with pre-mRNA and mRNA: candidate intermediates in formation and export of mRNA. Mol Cell Biol 2001, 21:7307-7319.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 7307-7319
-
-
Mili, S.1
Shu, H.J.2
Zhao, Y.3
Pinol-Roma, S.4
-
86
-
-
55949107443
-
Histone H2A ubiquitination in transcriptional regulation and DNA damage repair
-
Zhou W., Wang X., Rosenfeld M.G. Histone H2A ubiquitination in transcriptional regulation and DNA damage repair. Int J Biochem Cell Biol 2009, 41:12-15.
-
(2009)
Int J Biochem Cell Biol
, vol.41
, pp. 12-15
-
-
Zhou, W.1
Wang, X.2
Rosenfeld, M.G.3
-
87
-
-
79953164696
-
Gene expression control by protein deubiquitinases
-
Frappier L., Verrijzer C.P. Gene expression control by protein deubiquitinases. Curr Opin Genet Dev 2011, 21:207-213.
-
(2011)
Curr Opin Genet Dev
, vol.21
, pp. 207-213
-
-
Frappier, L.1
Verrijzer, C.P.2
-
88
-
-
77957369358
-
Histone H2B ubiquitination and beyond: regulation of nucleosome stability, chromatin dynamics and the trans-histone H3 methylation
-
Chandrasekharan M.B., Huang F., Sun Z.W. Histone H2B ubiquitination and beyond: regulation of nucleosome stability, chromatin dynamics and the trans-histone H3 methylation. Epigenetics 2010, 5:460-468.
-
(2010)
Epigenetics
, vol.5
, pp. 460-468
-
-
Chandrasekharan, M.B.1
Huang, F.2
Sun, Z.W.3
|