메뉴 건너뛰기




Volumn 63, Issue 3, 2012, Pages 777-797

Complex evolution in Arundinarieae (Poaceae: Bambusoideae): Incongruence between plastid and nuclear GBSSI gene phylogenies

Author keywords

Arundinarieae; GBSSI gene; Hybridization; Incongruence; Lineage sorting; Plastid DNA regions

Indexed keywords

GRANULE BOUND STARCH SYNTHASE I; GRANULE-BOUND STARCH SYNTHASE I; STARCH SYNTHASE; VEGETABLE PROTEIN;

EID: 84862816178     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2012.02.023     Document Type: Article
Times cited : (87)

References (163)
  • 1
    • 0027072827 scopus 로고
    • Plant invasions, interspecific hybridization and the evolution of new plant taxa
    • Abbott R.J. Plant invasions, interspecific hybridization and the evolution of new plant taxa. Trends Ecol. Evol. 1992, 7:401-405.
    • (1992) Trends Ecol. Evol. , vol.7 , pp. 401-405
    • Abbott, R.J.1
  • 2
    • 14744277777 scopus 로고    scopus 로고
    • Polyploidy and genome evolution in plants
    • Adams K.L., Wendel J.F. Polyploidy and genome evolution in plants. Curr. Opin. Plant Biol. 2005, 8:135-141.
    • (2005) Curr. Opin. Plant Biol. , vol.8 , pp. 135-141
    • Adams, K.L.1    Wendel, J.F.2
  • 3
    • 33846839295 scopus 로고    scopus 로고
    • Concordance trees, concordance factors, and the exploration of reticulate genealogy
    • Baum D.A. Concordance trees, concordance factors, and the exploration of reticulate genealogy. Taxon 2007, 56:417-426.
    • (2007) Taxon , vol.56 , pp. 417-426
    • Baum, D.A.1
  • 4
    • 20444491634 scopus 로고    scopus 로고
    • A review of long-branch attraction
    • Bergsten J. A review of long-branch attraction. Cladistics 2005, 21:163-193.
    • (2005) Cladistics , vol.21 , pp. 163-193
    • Bergsten, J.1
  • 5
    • 0037819441 scopus 로고    scopus 로고
    • Widespread horizontal transfer of mitochondrial genes in flowering plants
    • Bergthorsson U., Adams K.L., Thomason B., Palmer J.D. Widespread horizontal transfer of mitochondrial genes in flowering plants. Nature 2003, 424:197-201.
    • (2003) Nature , vol.424 , pp. 197-201
    • Bergthorsson, U.1    Adams, K.L.2    Thomason, B.3    Palmer, J.D.4
  • 7
    • 77952787167 scopus 로고    scopus 로고
    • Biogeography of the grasses (Poaceae): a phylogenetic approach to reveal evolutionary history in geographical space and geological time
    • Bouchenak-Khelladi Y., Verboom G.A., Savolainen V., Hodkinson T.R. Biogeography of the grasses (Poaceae): a phylogenetic approach to reveal evolutionary history in geographical space and geological time. Bot. J. Linn. Soc. 2010, 162:543-557.
    • (2010) Bot. J. Linn. Soc. , vol.162 , pp. 543-557
    • Bouchenak-Khelladi, Y.1    Verboom, G.A.2    Savolainen, V.3    Hodkinson, T.R.4
  • 8
    • 0031135337 scopus 로고    scopus 로고
    • Recombinant DNA sequences generated by PCR amplification
    • Bradley R., Hillis D. Recombinant DNA sequences generated by PCR amplification. Mol. Biol. Evol. 1997, 14:592-593.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 592-593
    • Bradley, R.1    Hillis, D.2
  • 9
    • 34347361538 scopus 로고    scopus 로고
    • Genetic divergence and hybrid speciation
    • Chapman M.A., Burke J.M. Genetic divergence and hybrid speciation. Evolution 2007, 61:1773-1780.
    • (2007) Evolution , vol.61 , pp. 1773-1780
    • Chapman, M.A.1    Burke, J.M.2
  • 10
    • 27144509572 scopus 로고    scopus 로고
    • Reticulate evolution in kiwifruit (Actinidia, Actinidiaceae) identified by comparing their maternal and paternal phylogenies
    • Chat J., Jauregui B., Petit R.J., Nadot S. Reticulate evolution in kiwifruit (Actinidia, Actinidiaceae) identified by comparing their maternal and paternal phylogenies. Am. J. Bot. 2004, 91:736-747.
    • (2004) Am. J. Bot. , vol.91 , pp. 736-747
    • Chat, J.1    Jauregui, B.2    Petit, R.J.3    Nadot, S.4
  • 11
    • 52249120300 scopus 로고
    • Chromosome numbers of some scattered bamboos
    • Chen R.Y., Zong W.X. Chromosome numbers of some scattered bamboos. Acta Phytotax. Sin. 1991, 29:452-455.
    • (1991) Acta Phytotax. Sin. , vol.29 , pp. 452-455
    • Chen, R.Y.1    Zong, W.X.2
  • 15
    • 0029838624 scopus 로고    scopus 로고
    • PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases
    • Cline J., Braman J., Hogrefe H. PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases. Nucl. Acids Res. 1996, 24:3546-3551.
    • (1996) Nucl. Acids Res. , vol.24 , pp. 3546-3551
    • Cline, J.1    Braman, J.2    Hogrefe, H.3
  • 16
    • 0001635951 scopus 로고
    • Rapid screening method to detect potential biparental inheritance of plastid DNA and results for over 200 angiosperm species
    • Corriveau J.L., Coleman A.W. Rapid screening method to detect potential biparental inheritance of plastid DNA and results for over 200 angiosperm species. Am. J. Bot. 1988, 75:1443-1458.
    • (1988) Am. J. Bot. , vol.75 , pp. 1443-1458
    • Corriveau, J.L.1    Coleman, A.W.2
  • 17
    • 0346127430 scopus 로고    scopus 로고
    • Cryptic trysts, genomic mergers, and plant speciation
    • Cronn R., Wendel J.F. Cryptic trysts, genomic mergers, and plant speciation. New Phytol. 2003, 161:133-142.
    • (2003) New Phytol. , vol.161 , pp. 133-142
    • Cronn, R.1    Wendel, J.F.2
  • 18
    • 0036935345 scopus 로고    scopus 로고
    • PCR-mediated recombination in amplification products derived from polyploid cotton
    • Cronn R., Cedroni M., Haselkorn T., Grover C., Wendel J.F. PCR-mediated recombination in amplification products derived from polyploid cotton. Theor. Appl. Genet. 2002, 104:482-489.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 482-489
    • Cronn, R.1    Cedroni, M.2    Haselkorn, T.3    Grover, C.4    Wendel, J.F.5
  • 19
    • 0036239573 scopus 로고    scopus 로고
    • Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes
    • Cronn R.C., Small R.L., Haselkorn T., Wendel J.F. Rapid diversification of the cotton genus (Gossypium: Malvaceae) revealed by analysis of sixteen nuclear and chloroplast genes. Am. J. Bot. 2002, 89:707-725.
    • (2002) Am. J. Bot. , vol.89 , pp. 707-725
    • Cronn, R.C.1    Small, R.L.2    Haselkorn, T.3    Wendel, J.F.4
  • 20
    • 0030816742 scopus 로고    scopus 로고
    • Can three incongruence tests predict when data should be combined?
    • Cunningham C. Can three incongruence tests predict when data should be combined?. Mol. Biol. Evol. 1997, 14:733-740.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 733-740
    • Cunningham, C.1
  • 22
    • 34447624253 scopus 로고    scopus 로고
    • A preliminary phylogenetic analysis of the grass subfamily Pooideae (Poaceae), with attention to structural features of the plastid and nuclear genomes, including an intron loss in GBSSI
    • Davis J.I., Soreng R.J. A preliminary phylogenetic analysis of the grass subfamily Pooideae (Poaceae), with attention to structural features of the plastid and nuclear genomes, including an intron loss in GBSSI. Aliso 2007, 23:335-348.
    • (2007) Aliso , vol.23 , pp. 335-348
    • Davis, J.I.1    Soreng, R.J.2
  • 23
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf material
    • Doyle J.J., Doyle J.L. A rapid DNA isolation procedure for small quantities of fresh leaf material. Phytochem. Bull. 1987, 19:11-15.
    • (1987) Phytochem. Bull. , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 24
    • 0033055530 scopus 로고    scopus 로고
    • Incongruence in the diploid B-genome species complex of Glycine (Leguminosae) revisited: histone H3-D alleles versus chloroplast haplotypes
    • Doyle J.J., Doyle J.L., Brown A.H. Incongruence in the diploid B-genome species complex of Glycine (Leguminosae) revisited: histone H3-D alleles versus chloroplast haplotypes. Mol. Biol. Evol. 1999, 16:354-362.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 354-362
    • Doyle, J.J.1    Doyle, J.L.2    Brown, A.H.3
  • 25
    • 0346758118 scopus 로고    scopus 로고
    • Diploid and polyploid reticulate evolution throughout the history of the perennial soybeans (Glycine subgenus Glycine)
    • Doyle J.J., Doyle J.L., Rauscher J.T., Brown A.H.D. Diploid and polyploid reticulate evolution throughout the history of the perennial soybeans (Glycine subgenus Glycine). New Phytol. 2003, 161:121-132.
    • (2003) New Phytol. , vol.161 , pp. 121-132
    • Doyle, J.J.1    Doyle, J.L.2    Rauscher, J.T.3    Brown, A.H.D.4
  • 27
    • 70349682921 scopus 로고    scopus 로고
    • Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes
    • Edger P., Pires J. Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes. Chromosome Res. 2009, 17:699-717.
    • (2009) Chromosome Res. , vol.17 , pp. 699-717
    • Edger, P.1    Pires, J.2
  • 28
    • 42549087334 scopus 로고    scopus 로고
    • Phylogeny of Conradina and related southeastern scrub mints (Lamiaceae) based on GapC gene sequences
    • Edwards C.E., Lefkowitz D., Soltis D.E., Soltis P.S. Phylogeny of Conradina and related southeastern scrub mints (Lamiaceae) based on GapC gene sequences. Int. J. Plant Sci. 2008, 169:579-594.
    • (2008) Int. J. Plant Sci. , vol.169 , pp. 579-594
    • Edwards, C.E.1    Lefkowitz, D.2    Soltis, D.E.3    Soltis, P.S.4
  • 29
    • 77954676162 scopus 로고    scopus 로고
    • Species boundaries and frequency of hybridization in the Dryopteris carthusiana (Dryopteridaceae) complex: a taxonomic puzzle resolved using genome size data
    • Ekrt L., Holubova R., Travnicek P., Suda J. Species boundaries and frequency of hybridization in the Dryopteris carthusiana (Dryopteridaceae) complex: a taxonomic puzzle resolved using genome size data. Am. J. Bot. 2010, 97:1208-1219.
    • (2010) Am. J. Bot. , vol.97 , pp. 1208-1219
    • Ekrt, L.1    Holubova, R.2    Travnicek, P.3    Suda, J.4
  • 35
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 36
    • 58449118626 scopus 로고    scopus 로고
    • A molecular study of hybridization and homoploid hybrid speciation in Argyranthemum (Asteraceae) on Tenerife, the Canary Islands
    • Fjellheim S., JØRgensen M.H., Kjos M., Borgen L. A molecular study of hybridization and homoploid hybrid speciation in Argyranthemum (Asteraceae) on Tenerife, the Canary Islands. Bot. J. Linn. Soc. 2009, 159:19-31.
    • (2009) Bot. J. Linn. Soc. , vol.159 , pp. 19-31
    • Fjellheim, S.1    JØRgensen, M.H.2    Kjos, M.3    Borgen, L.4
  • 38
    • 43049102034 scopus 로고    scopus 로고
    • Molecular phylogeny and reticulate origins of the polyploid Bromus species from section Genea (Poaceae)
    • Fortune P.M., Pourtau N., Viron N., Ainouche M.L. Molecular phylogeny and reticulate origins of the polyploid Bromus species from section Genea (Poaceae). Am. J. Bot. 2008, 95:454-464.
    • (2008) Am. J. Bot. , vol.95 , pp. 454-464
    • Fortune, P.M.1    Pourtau, N.2    Viron, N.3    Ainouche, M.L.4
  • 39
    • 84862796030 scopus 로고
    • Bashania, a new bamboo genus from western China
    • Geng B.J., Yi T.P. Bashania, a new bamboo genus from western China. J. Nanjing Univ. (Nat. Sci.) 1982, 3:722-732.
    • (1982) J. Nanjing Univ. (Nat. Sci.) , vol.3 , pp. 722-732
    • Geng, B.J.1    Yi, T.P.2
  • 40
    • 0000525897 scopus 로고
    • Chromosome numbers in southwestern grasses
    • Gould F.W. Chromosome numbers in southwestern grasses. Am. J. Bot. 1960, 47:873-877.
    • (1960) Am. J. Bot. , vol.47 , pp. 873-877
    • Gould, F.W.1
  • 41
    • 0034800508 scopus 로고    scopus 로고
    • GPWG Phylogeny and subfamilial classification of the grasses (Poaceae)
    • GPWG Phylogeny and subfamilial classification of the grasses (Poaceae). Ann. Missouri Bot. Gard. 2001, 88:373-457.
    • (2001) Ann. Missouri Bot. Gard. , vol.88 , pp. 373-457
  • 42
    • 0004042690 scopus 로고
    • Columbia University Press, New York
    • Grant V. Plant Speciation 1981, Columbia University Press, New York.
    • (1981) Plant Speciation
    • Grant, V.1
  • 43
    • 15944425091 scopus 로고    scopus 로고
    • The ecological genetics of homoploid hybrid speciation
    • Gross B.L., Rieseberg L.H. The ecological genetics of homoploid hybrid speciation. J. Hered. 2005, 96:241-252.
    • (2005) J. Hered. , vol.96 , pp. 241-252
    • Gross, B.L.1    Rieseberg, L.H.2
  • 44
    • 67449110089 scopus 로고    scopus 로고
    • Disentangling reticulate evolution in an Arctic-Alpine polyploid complex
    • Guggisberg A., Mansion G., Conti E. Disentangling reticulate evolution in an Arctic-Alpine polyploid complex. Syst. Biol. 2009, 58:55-73.
    • (2009) Syst. Biol. , vol.58 , pp. 55-73
    • Guggisberg, A.1    Mansion, G.2    Conti, E.3
  • 45
    • 0347093519 scopus 로고    scopus 로고
    • Phylogenetics of the Thamnocalamus group and its allies (Gramineae: Bambusoideae): inference from the sequences of GBSSI gene and ITS spacer
    • Guo Z.H., Li D.Z. Phylogenetics of the Thamnocalamus group and its allies (Gramineae: Bambusoideae): inference from the sequences of GBSSI gene and ITS spacer. Mol. Phylogenet. Evol. 2004, 30:1-12.
    • (2004) Mol. Phylogenet. Evol. , vol.30 , pp. 1-12
    • Guo, Z.H.1    Li, D.Z.2
  • 46
    • 0035619568 scopus 로고    scopus 로고
    • Genetic variation and evolution of the alpine bamboos (Poaceae: Bambusoideae) using DNA sequence data
    • Guo Z.H., Chen Y.Y., Li D.Z., Yang J.B. Genetic variation and evolution of the alpine bamboos (Poaceae: Bambusoideae) using DNA sequence data. J. Plant Res. 2001, 114:315-322.
    • (2001) J. Plant Res. , vol.114 , pp. 315-322
    • Guo, Z.H.1    Chen, Y.Y.2    Li, D.Z.3    Yang, J.B.4
  • 47
    • 0036361767 scopus 로고    scopus 로고
    • Phylogenetic studies on the Thamnocalamus group and its allies (Gramineae: Bambusoideae) based on ITS sequence data
    • Guo Z.H., Chen Y.Y., Li D.Z. Phylogenetic studies on the Thamnocalamus group and its allies (Gramineae: Bambusoideae) based on ITS sequence data. Mol. Phylogenet. Evol. 2002, 22:20-30.
    • (2002) Mol. Phylogenet. Evol. , vol.22 , pp. 20-30
    • Guo, Z.H.1    Chen, Y.Y.2    Li, D.Z.3
  • 49
    • 56849104634 scopus 로고    scopus 로고
    • Taxon sampling and the accuracy of phylogenetic analyses
    • Heath T.A., Hedtke S.M., Hillis D.M. Taxon sampling and the accuracy of phylogenetic analyses. J. Syst. Evol. 2008, 46:239-257.
    • (2008) J. Syst. Evol. , vol.46 , pp. 239-257
    • Heath, T.A.1    Hedtke, S.M.2    Hillis, D.M.3
  • 50
    • 0029119914 scopus 로고
    • Methods and reagents: fidelity of DNA polymerases for PCR
    • Hengen P.N. Methods and reagents: fidelity of DNA polymerases for PCR. Trends Biochem. Sci. 1995, 20:324-325.
    • (1995) Trends Biochem. Sci. , vol.20 , pp. 324-325
    • Hengen, P.N.1
  • 51
    • 0242669921 scopus 로고    scopus 로고
    • Is sparse taxon sampling a problem for phylogenetic inference?
    • Hillis D.M., Pollock D.D., McGuire J.A., Zwickl D.J. Is sparse taxon sampling a problem for phylogenetic inference?. Syst. Biol. 2003, 52:124-126.
    • (2003) Syst. Biol. , vol.52 , pp. 124-126
    • Hillis, D.M.1    Pollock, D.D.2    McGuire, J.A.3    Zwickl, D.J.4
  • 52
    • 35148863240 scopus 로고    scopus 로고
    • Gene duplication and the adaptive evolution of a classic genetic switch
    • Hittinger C.T., Carroll S.B. Gene duplication and the adaptive evolution of a classic genetic switch. Nature 2007, 449:677-681.
    • (2007) Nature , vol.449 , pp. 677-681
    • Hittinger, C.T.1    Carroll, S.B.2
  • 53
    • 0034360457 scopus 로고    scopus 로고
    • A comparison of ITS nuclear rDNA sequence data and AFLP markers for phylogenetic studies in Phyllostachys (Bambusoideae, Poaceae)
    • Hodkinson T.R., Renvoize S.A., Chonghaile G.N., Stapleton C.M.A., Chase M.W. A comparison of ITS nuclear rDNA sequence data and AFLP markers for phylogenetic studies in Phyllostachys (Bambusoideae, Poaceae). J. Plant Res. 2000, 113:259-269.
    • (2000) J. Plant Res. , vol.113 , pp. 259-269
    • Hodkinson, T.R.1    Renvoize, S.A.2    Chonghaile, G.N.3    Stapleton, C.M.A.4    Chase, M.W.5
  • 54
    • 78649570620 scopus 로고    scopus 로고
    • Phylogenetic analyses of plastid and nuclear DNA sequences indicate a rapid late Miocene radiation of the temperate bamboo tribe Arundinarieae (Poaceae, Bambusoideae)
    • Hodkinson T.R., Ní Chonghaile G., Sungkaew S., Chase M.W., Salamin N., Stapleton C.M.A. Phylogenetic analyses of plastid and nuclear DNA sequences indicate a rapid late Miocene radiation of the temperate bamboo tribe Arundinarieae (Poaceae, Bambusoideae). Plant Ecol. Divers. 2010, 3:109-120.
    • (2010) Plant Ecol. Divers. , vol.3 , pp. 109-120
    • Hodkinson, T.R.1    Ní Chonghaile, G.2    Sungkaew, S.3    Chase, M.W.4    Salamin, N.5    Stapleton, C.M.A.6
  • 56
    • 19544388367 scopus 로고    scopus 로고
    • Genealogical evidence of homoploid hybrid speciation in an adaptive radiation of Scaevola (Goodeniaceae) in the Hawaiian Islands
    • Howarth D.G., Baum D.A. Genealogical evidence of homoploid hybrid speciation in an adaptive radiation of Scaevola (Goodeniaceae) in the Hawaiian Islands. Evolution 2005, 59:948-961.
    • (2005) Evolution , vol.59 , pp. 948-961
    • Howarth, D.G.1    Baum, D.A.2
  • 57
    • 3042671583 scopus 로고
    • Two new genera of Bambusoideae from S.W. China 2. Qiongzhuea Hsueh et Yi
    • Hsueh C.J., Yi T.P. Two new genera of Bambusoideae from S.W. China 2. Qiongzhuea Hsueh et Yi. Acta Bot. Yunn. 1980, 2:91-99.
    • (1980) Acta Bot. Yunn. , vol.2 , pp. 91-99
    • Hsueh, C.J.1    Yi, T.P.2
  • 58
    • 3042627252 scopus 로고    scopus 로고
    • Validation of Qiongzhuea and correlated species names (Gramineae, Bambusoideae)
    • Hsueh C.J., Yi T.P., Li D.Z. Validation of Qiongzhuea and correlated species names (Gramineae, Bambusoideae). Taxon 1996, 45:217-221.
    • (1996) Taxon , vol.45 , pp. 217-221
    • Hsueh, C.J.1    Yi, T.P.2    Li, D.Z.3
  • 59
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • Huson D.H., Bryant D. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 2006, 23:254-267.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 60
    • 0037551902 scopus 로고    scopus 로고
    • The origin and evolution of Eragrostis tef (Poaceae) and related polyploids: evidence from nuclear waxy and plastid rps16
    • Ingram A.L., Doyle J.J. The origin and evolution of Eragrostis tef (Poaceae) and related polyploids: evidence from nuclear waxy and plastid rps16. Am. J. Bot. 2003, 90:116-122.
    • (2003) Am. J. Bot. , vol.90 , pp. 116-122
    • Ingram, A.L.1    Doyle, J.J.2
  • 61
    • 4444282083 scopus 로고    scopus 로고
    • Is Eragrostis (Poaceae) monophyletic? Insights from nuclear and plastid sequence data
    • Ingram A.L., Doyle J.J. Is Eragrostis (Poaceae) monophyletic? Insights from nuclear and plastid sequence data. Syst. Bot. 2004, 29:545-552.
    • (2004) Syst. Bot. , vol.29 , pp. 545-552
    • Ingram, A.L.1    Doyle, J.J.2
  • 62
    • 34548049477 scopus 로고    scopus 로고
    • The maternal species of hannouzasa (Sasaella ramosa)
    • Ishii A., Miyata S., Hosoyama Y. The maternal species of hannouzasa (Sasaella ramosa). Bamboo J. 2003, 20:12-18.
    • (2003) Bamboo J. , vol.20 , pp. 12-18
    • Ishii, A.1    Miyata, S.2    Hosoyama, Y.3
  • 63
    • 70349653965 scopus 로고    scopus 로고
    • Molecular evidence of reticulate evolution in the subgenus Plantago (Plantaginaceae)
    • Ishikawa N., Yokoyama J., Tsukaya H. Molecular evidence of reticulate evolution in the subgenus Plantago (Plantaginaceae). Am. J. Bot. 2009, 96:1627-1635.
    • (2009) Am. J. Bot. , vol.96 , pp. 1627-1635
    • Ishikawa, N.1    Yokoyama, J.2    Tsukaya, H.3
  • 64
    • 30344467525 scopus 로고    scopus 로고
    • Recent, allopatric, homoploid hybrid speciation: the origin of Senecio squalidus (Asteraceae) in the British Isles from a hybrid zone on Mount Etna, Sicily
    • James J.K., Abbott R.J. Recent, allopatric, homoploid hybrid speciation: the origin of Senecio squalidus (Asteraceae) in the British Isles from a hybrid zone on Mount Etna, Sicily. Evolution 2005, 59:2533-2547.
    • (2005) Evolution , vol.59 , pp. 2533-2547
    • James, J.K.1    Abbott, R.J.2
  • 68
    • 70149100417 scopus 로고    scopus 로고
    • A statistical approach for distinguishing hybridization and incomplete lineage sorting
    • Joly S., McLenachan P.A., Lockhart P.J. A statistical approach for distinguishing hybridization and incomplete lineage sorting. Am. Nat. 2009, 174:E54-E70.
    • (2009) Am. Nat. , vol.174
    • Joly, S.1    McLenachan, P.A.2    Lockhart, P.J.3
  • 69
    • 0344629203 scopus 로고    scopus 로고
    • Bias and artifacts in multitemplate polymerase chain reactions (PCR)
    • Kanagawa T. Bias and artifacts in multitemplate polymerase chain reactions (PCR). J. Biosci. Bioeng. 2003, 96:317-323.
    • (2003) J. Biosci. Bioeng. , vol.96 , pp. 317-323
    • Kanagawa, T.1
  • 70
    • 45949107473 scopus 로고    scopus 로고
    • Recent developments in the MAFFT multiple sequence alignment program
    • Katoh K., Toh H. Recent developments in the MAFFT multiple sequence alignment program. Brief. Bioinform. 2008, 9:286-298.
    • (2008) Brief. Bioinform. , vol.9 , pp. 286-298
    • Katoh, K.1    Toh, H.2
  • 71
    • 0037100671 scopus 로고    scopus 로고
    • MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
    • Katoh K., Misawa K., Kuma K.i., Miyata T. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucl. Acids Res. 2002, 30:3059-3066.
    • (2002) Nucl. Acids Res. , vol.30 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.3    Miyata, T.4
  • 72
    • 0031306828 scopus 로고    scopus 로고
    • Molecular evolution and phylogenetic utility of the chloroplast rpl16 intron in Chusquea and the Bambusoideae (Poaceae)
    • Kelchner S.A., Clark L.G. Molecular evolution and phylogenetic utility of the chloroplast rpl16 intron in Chusquea and the Bambusoideae (Poaceae). Mol. Phylogenet. Evol. 1997, 8:385-397.
    • (1997) Mol. Phylogenet. Evol. , vol.8 , pp. 385-397
    • Kelchner, S.A.1    Clark, L.G.2
  • 74
    • 51549083858 scopus 로고    scopus 로고
    • Incongruence between cpDNA and nrITS trees indicates extensive hybridization within Eupersicaria (Polygonaceae)
    • Kim S.T., Donoghue M.J. Incongruence between cpDNA and nrITS trees indicates extensive hybridization within Eupersicaria (Polygonaceae). Am. J. Bot. 2008, 95:1122-1135.
    • (2008) Am. J. Bot. , vol.95 , pp. 1122-1135
    • Kim, S.T.1    Donoghue, M.J.2
  • 75
    • 50449109352 scopus 로고    scopus 로고
    • Allopolyploid speciation in Persicaria (Polygonaceae): insights from a low-copy nuclear region
    • Kim S.T., Sultan S.E., Donoghue M.J. Allopolyploid speciation in Persicaria (Polygonaceae): insights from a low-copy nuclear region. Proc. Natl. Acad. Sci. USA 2008, 105:12370-12375.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 12370-12375
    • Kim, S.T.1    Sultan, S.E.2    Donoghue, M.J.3
  • 76
    • 0035065311 scopus 로고    scopus 로고
    • Uninformative characters and apparent conflict between molecules and morphology
    • Lee M.S.Y. Uninformative characters and apparent conflict between molecules and morphology. Mol. Biol. Evol. 2001, 18:676-680.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 676-680
    • Lee, M.S.Y.1
  • 78
    • 0007836616 scopus 로고    scopus 로고
    • The Flora of China Bambusoideae project-problems and current understanding of bamboo taxonomy in China
    • Academic Press, London, G.P. Chapman (Ed.)
    • Li D.Z. The Flora of China Bambusoideae project-problems and current understanding of bamboo taxonomy in China. The Bamboos 1997, 61-81. Academic Press, London. G.P. Chapman (Ed.).
    • (1997) The Bamboos , pp. 61-81
    • Li, D.Z.1
  • 80
    • 52249095052 scopus 로고    scopus 로고
    • Chromosome numbers of some caespitose bamboos native in or introduced to China
    • Li X.L., Lin R.S., Fung H.L., Qi Z.X., Song W.Q., Chen R.Y. Chromosome numbers of some caespitose bamboos native in or introduced to China. Acta Phytotax. Sin. 2001, 39:433-442.
    • (2001) Acta Phytotax. Sin. , vol.39 , pp. 433-442
    • Li, X.L.1    Lin, R.S.2    Fung, H.L.3    Qi, Z.X.4    Song, W.Q.5    Chen, R.Y.6
  • 81
    • 78649576211 scopus 로고    scopus 로고
    • Bambuseae (Poaceae)
    • Science Press and Missouri Botanical Garden Press, Beijing and St. Louis, Z.Y. Wu, P.H. Raven, D.Y. Hong (Eds.)
    • Li D.Z., Wang Z.P., Zhu Z.D., Xia N.H., Jia L.Z., Guo Z.H., Yang G.Y., Stapleton C.M.A. Bambuseae (Poaceae). Flora of China 2006, 7-180. Science Press and Missouri Botanical Garden Press, Beijing and St. Louis. Z.Y. Wu, P.H. Raven, D.Y. Hong (Eds.).
    • (2006) Flora of China , pp. 7-180
    • Li, D.Z.1    Wang, Z.P.2    Zhu, Z.D.3    Xia, N.H.4    Jia, L.Z.5    Guo, Z.H.6    Yang, G.Y.7    Stapleton, C.M.A.8
  • 82
    • 33646423282 scopus 로고    scopus 로고
    • Allopolyploid origin of Cardamine asarifolia (Brassicaceae): incongruence between plastid and nuclear ribosomal DNA sequences solved by a single-copy nuclear gene
    • Lihová J., Shimizu K.K., Marhold K. Allopolyploid origin of Cardamine asarifolia (Brassicaceae): incongruence between plastid and nuclear ribosomal DNA sequences solved by a single-copy nuclear gene. Mol. Phylogenet. Evol. 2006, 39:759-786.
    • (2006) Mol. Phylogenet. Evol. , vol.39 , pp. 759-786
    • Lihová, J.1    Shimizu, K.K.2    Marhold, K.3
  • 83
    • 84862808938 scopus 로고    scopus 로고
    • The megasporogenesis, microsporogenesis and the development of their female and male gametophyte in Menstruocalamus sichuanensis
    • Lin S.Y., Hao J.J., Xin H., Ding Y.L. The megasporogenesis, microsporogenesis and the development of their female and male gametophyte in Menstruocalamus sichuanensis. J. Nanjing For. Univ. (Nat. Sci. Ed.) 2009, 33:9-12.
    • (2009) J. Nanjing For. Univ. (Nat. Sci. Ed.) , vol.33 , pp. 9-12
    • Lin, S.Y.1    Hao, J.J.2    Xin, H.3    Ding, Y.L.4
  • 84
    • 17044416291 scopus 로고    scopus 로고
    • Reconstructing patterns of reticulate evolution in plants
    • Linder C.R., Rieseberg L.H. Reconstructing patterns of reticulate evolution in plants. Am. J. Bot. 2004, 91:1700-1708.
    • (2004) Am. J. Bot. , vol.91 , pp. 1700-1708
    • Linder, C.R.1    Rieseberg, L.H.2
  • 85
    • 77950651427 scopus 로고    scopus 로고
    • Allopolyploid speciation and ongoing backcrossing between diploid progenitor and tetraploid progeny lineages in the Achillea millefolium species complex: analyses of single-copy nuclear genes and genomic AFLP
    • Ma J.X., Li Y.N., Vogl C., Ehrendorfer F., Guo Y.P. Allopolyploid speciation and ongoing backcrossing between diploid progenitor and tetraploid progeny lineages in the Achillea millefolium species complex: analyses of single-copy nuclear genes and genomic AFLP. BMC Evol. Biol. 2010, 10:100.
    • (2010) BMC Evol. Biol. , vol.10 , pp. 100
    • Ma, J.X.1    Li, Y.N.2    Vogl, C.3    Ehrendorfer, F.4    Guo, Y.P.5
  • 86
    • 0031504952 scopus 로고    scopus 로고
    • Gene trees in species trees
    • Maddison W.P. Gene trees in species trees. Syst. Biol. 1997, 46:523-536.
    • (1997) Syst. Biol. , vol.46 , pp. 523-536
    • Maddison, W.P.1
  • 87
    • 77952843033 scopus 로고    scopus 로고
    • Gene capture from across the grass family in the allohexaploid Elymus repens (L.) Gould (Poaceae, Triticeae) as evidenced by ITS, GBSSI, and molecular cytogenetics
    • Mahelka V., Kopecky D. Gene capture from across the grass family in the allohexaploid Elymus repens (L.) Gould (Poaceae, Triticeae) as evidenced by ITS, GBSSI, and molecular cytogenetics. Mol. Biol. Evol. 2010, 27:1370-1390.
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 1370-1390
    • Mahelka, V.1    Kopecky, D.2
  • 88
    • 33745890273 scopus 로고    scopus 로고
    • Polyploidy, hybridization and reticulate evolution: lessons from the Brassicaceae
    • Marhold K., Lihová J. Polyploidy, hybridization and reticulate evolution: lessons from the Brassicaceae. Plant Syst. Evol. 2006, 259:143-174.
    • (2006) Plant Syst. Evol. , vol.259 , pp. 143-174
    • Marhold, K.1    Lihová, J.2
  • 90
    • 0035667916 scopus 로고    scopus 로고
    • Origin of North American Elymus (Poaceae: Triticeae) allotetraploids based on granule-bound starch synthase gene sequences
    • Mason-Gamer R.J. Origin of North American Elymus (Poaceae: Triticeae) allotetraploids based on granule-bound starch synthase gene sequences. Syst. Bot. 2001, 26:757-768.
    • (2001) Syst. Bot. , vol.26 , pp. 757-768
    • Mason-Gamer, R.J.1
  • 91
    • 1642401473 scopus 로고    scopus 로고
    • Reticulate evolution, introgression, and intertribal gene capture in an allohexaploid grass
    • Mason-Gamer R.J. Reticulate evolution, introgression, and intertribal gene capture in an allohexaploid grass. Syst. Biol. 2004, 53:25-37.
    • (2004) Syst. Biol. , vol.53 , pp. 25-37
    • Mason-Gamer, R.J.1
  • 92
    • 42749087776 scopus 로고    scopus 로고
    • Allohexaploidy, introgression, and the complex phylogenetic history of Elymus repens (Poaceae)
    • Mason-Gamer R.J. Allohexaploidy, introgression, and the complex phylogenetic history of Elymus repens (Poaceae). Mol. Phylogenet. Evol. 2008, 47:598-611.
    • (2008) Mol. Phylogenet. Evol. , vol.47 , pp. 598-611
    • Mason-Gamer, R.J.1
  • 93
    • 0030311441 scopus 로고    scopus 로고
    • Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Gramineae)
    • Mason-Gamer R.J., Kellogg E.A. Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Gramineae). Syst. Biol. 1996, 45:524-545.
    • (1996) Syst. Biol. , vol.45 , pp. 524-545
    • Mason-Gamer, R.J.1    Kellogg, E.A.2
  • 94
    • 0031796608 scopus 로고    scopus 로고
    • Granule-bound starch synthase: structure, function, and phylogenetic utility
    • Mason-Gamer R.J., Weil C.F., Kellogg E.A. Granule-bound starch synthase: structure, function, and phylogenetic utility. Mol. Biol. Evol. 1998, 15:1658-1673.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1658-1673
    • Mason-Gamer, R.J.1    Weil, C.F.2    Kellogg, E.A.3
  • 95
    • 70649090117 scopus 로고    scopus 로고
    • Phylogenetic relationships and reticulation among Asian Elymus (Poaceae) allotetraploids: analyses of three nuclear gene trees
    • Mason-Gamer R.J., Burns M.M., Naum M. Phylogenetic relationships and reticulation among Asian Elymus (Poaceae) allotetraploids: analyses of three nuclear gene trees. Mol. Phylogenet. Evol. 2010, 54:10-22.
    • (2010) Mol. Phylogenet. Evol. , vol.54 , pp. 10-22
    • Mason-Gamer, R.J.1    Burns, M.M.2    Naum, M.3
  • 96
    • 77956212117 scopus 로고    scopus 로고
    • Reticulate evolutionary history of a complex group of grasses: phylogeny of Elymus StStHH allotetraploids based on three nuclear genes
    • Mason-Gamer R.J., Burns M.M., Naum M. Reticulate evolutionary history of a complex group of grasses: phylogeny of Elymus StStHH allotetraploids based on three nuclear genes. PLoS ONE 2010, 5:e10989.
    • (2010) PLoS ONE , vol.5
    • Mason-Gamer, R.J.1    Burns, M.M.2    Naum, M.3
  • 99
    • 0034782104 scopus 로고    scopus 로고
    • Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus
    • Mayol M., Rosselló J.A. Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus. Mol. Phylogenet. Evol. 2001, 19:167-176.
    • (2001) Mol. Phylogenet. Evol. , vol.19 , pp. 167-176
    • Mayol, M.1    Rosselló, J.A.2
  • 100
    • 67549114986 scopus 로고    scopus 로고
    • Insights into reticulate evolution in Machaerantherinae (Asteraceae: Astereae): 5S ribosomal RNA spacer variation, estimating support for incongruence, and constructing reticulate phylogenies
    • Morgan D.R., Korn R.L., Mugleston S.L. Insights into reticulate evolution in Machaerantherinae (Asteraceae: Astereae): 5S ribosomal RNA spacer variation, estimating support for incongruence, and constructing reticulate phylogenies. Am. J. Bot. 2009, 96:920-932.
    • (2009) Am. J. Bot. , vol.96 , pp. 920-932
    • Morgan, D.R.1    Korn, R.L.2    Mugleston, S.L.3
  • 101
    • 84862807838 scopus 로고
    • Hybridization among Bambusaceae species: in bamboo production and utilization
    • 5.3A, Production and Utilization of Bamboo and Related Species, XVII IUFRO World Congress, Kyoto, Japan
    • Muramatsu, M., 1981. Hybridization among Bambusaceae species: in bamboo production and utilization. In: Proc. Congr. Group 5.3A, Production and Utilization of Bamboo and Related Species, XVII IUFRO World Congress, Kyoto, Japan, pp. 6-17.
    • (1981) Proc. Congr. Group , pp. 6-17
    • Muramatsu, M.1
  • 102
    • 33644988217 scopus 로고    scopus 로고
    • Endemic dwarf birch Betula apoiensis (Betulaceae) is a hybrid that originated from Betula ermanii and Betula ovalifolia
    • Nagamitsu T., Kawahara T., Kanazashi A. Endemic dwarf birch Betula apoiensis (Betulaceae) is a hybrid that originated from Betula ermanii and Betula ovalifolia. Plant Species Biol. 2006, 21:19-29.
    • (2006) Plant Species Biol. , vol.21 , pp. 19-29
    • Nagamitsu, T.1    Kawahara, T.2    Kanazashi, A.3
  • 103
    • 67649464976 scopus 로고
    • Two new genera of Bambusaceae, with special remarks on the related genera growing in eastern Asia
    • Nakai T. Two new genera of Bambusaceae, with special remarks on the related genera growing in eastern Asia. J. Arnold Arbor. 1925, 6:145-153.
    • (1925) J. Arnold Arbor. , vol.6 , pp. 145-153
    • Nakai, T.1
  • 104
    • 0029059015 scopus 로고
    • Template-switching during DNA synthesis by Thermus aquaticus DNA polymerase I
    • Odelberg S.J., Weiss R.B., Hata A., White R. Template-switching during DNA synthesis by Thermus aquaticus DNA polymerase I. Nucl. Acids Res. 1995, 23:2049-2057.
    • (1995) Nucl. Acids Res. , vol.23 , pp. 2049-2057
    • Odelberg, S.J.1    Weiss, R.B.2    Hata, A.3    White, R.4
  • 106
    • 3042836334 scopus 로고    scopus 로고
    • Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics
    • Paterson A.H., Bowers J.E., Chapman B.A. Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics. Proc. Natl. Acad. Sci. USA 2004, 101:9903-9908.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 9903-9908
    • Paterson, A.H.1    Bowers, J.E.2    Chapman, B.A.3
  • 108
    • 52249112021 scopus 로고    scopus 로고
    • Highly heterogeneous generic delimitation within the temperate bamboo clade (Poaceae: Bambusoideae): evidence from GBSSI and ITS sequences
    • Peng S., Yang H.Q., Li D.Z. Highly heterogeneous generic delimitation within the temperate bamboo clade (Poaceae: Bambusoideae): evidence from GBSSI and ITS sequences. Taxon 2008, 57:799-810.
    • (2008) Taxon , vol.57 , pp. 799-810
    • Peng, S.1    Yang, H.Q.2    Li, D.Z.3
  • 109
    • 34250737464 scopus 로고    scopus 로고
    • Origin and evolution of North American polyploid Silene (Caryophyllaceae)
    • Popp M., Oxelman B. Origin and evolution of North American polyploid Silene (Caryophyllaceae). Am. J. Bot. 2007, 94:330-349.
    • (2007) Am. J. Bot. , vol.94 , pp. 330-349
    • Popp, M.1    Oxelman, B.2
  • 110
    • 20744455385 scopus 로고    scopus 로고
    • Origin and evolution of a circumpolar polyploid species complex in Silene (Caryophyllaceae) inferred from low copy nuclear RNA polymerase introns, rDNA, and chloroplast DNA
    • Popp M., Erixon P., Eggens F., Oxelman B. Origin and evolution of a circumpolar polyploid species complex in Silene (Caryophyllaceae) inferred from low copy nuclear RNA polymerase introns, rDNA, and chloroplast DNA. Syst. Bot. 2005, 30:302-313.
    • (2005) Syst. Bot. , vol.30 , pp. 302-313
    • Popp, M.1    Erixon, P.2    Eggens, F.3    Oxelman, B.4
  • 111
    • 45849154165 scopus 로고    scopus 로고
    • JModelTest: phylogenetic model averaging
    • Posada D. JModelTest: phylogenetic model averaging. Mol. Biol. Evol. 2008, 25:1253-1256.
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 112
    • 0347062480 scopus 로고    scopus 로고
    • A new species of Bashania (Poaceae: Bambusoideae) from Mt. Qinling, Shaanxi, China
    • Ren Y., Li Y., Dang G.D. A new species of Bashania (Poaceae: Bambusoideae) from Mt. Qinling, Shaanxi, China. Novon 2003, 13:473-476.
    • (2003) Novon , vol.13 , pp. 473-476
    • Ren, Y.1    Li, Y.2    Dang, G.D.3
  • 113
    • 33845904639 scopus 로고    scopus 로고
    • Horizontal gene transfer in plants
    • Richardson A.O., Palmer J.D. Horizontal gene transfer in plants. J. Exp. Bot. 2007, 58:1-9.
    • (2007) J. Exp. Bot. , vol.58 , pp. 1-9
    • Richardson, A.O.1    Palmer, J.D.2
  • 114
    • 0031465850 scopus 로고    scopus 로고
    • Hybrid origins of plant species
    • Rieseberg L.H. Hybrid origins of plant species. Annu. Rev. Ecol. Syst. 1997, 28:359-389.
    • (1997) Annu. Rev. Ecol. Syst. , vol.28 , pp. 359-389
    • Rieseberg, L.H.1
  • 115
    • 0001907141 scopus 로고
    • Phylogenetic consequences of cytoplasmic gene flow in plants
    • Rieseberg L.H., Soltis D.E. Phylogenetic consequences of cytoplasmic gene flow in plants. Evol. Trends Plants 1991, 5:65-84.
    • (1991) Evol. Trends Plants , vol.5 , pp. 65-84
    • Rieseberg, L.H.1    Soltis, D.E.2
  • 117
    • 0025105039 scopus 로고
    • Helianthus annuus ssp. texanus has chloroplast DNA and nuclear ribosomal RNA genes of Helianthus debilis ssp. cucumerifolius
    • Rieseberg L.H., Beckstrom-Sternberg S., Doan K. Helianthus annuus ssp. texanus has chloroplast DNA and nuclear ribosomal RNA genes of Helianthus debilis ssp. cucumerifolius. Proc. Natl. Acad. Sci. USA 1990, 87:593-597.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 593-597
    • Rieseberg, L.H.1    Beckstrom-Sternberg, S.2    Doan, K.3
  • 118
    • 0028992878 scopus 로고
    • Interspecific pollen competition as a reproductive barrier between sympatric species of Helianthus (Asteraceae)
    • Rieseberg L.H., Desrochers A.M., Youn S.J. Interspecific pollen competition as a reproductive barrier between sympatric species of Helianthus (Asteraceae). Am. J. Bot. 1995, 82:515-519.
    • (1995) Am. J. Bot. , vol.82 , pp. 515-519
    • Rieseberg, L.H.1    Desrochers, A.M.2    Youn, S.J.3
  • 119
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 120
    • 0034350321 scopus 로고    scopus 로고
    • Testing hybridization hypotheses based on incongruent gene trees
    • Sang T., Zhong Y. Testing hybridization hypotheses based on incongruent gene trees. Syst. Biol. 2000, 49:422-434.
    • (2000) Syst. Biol. , vol.49 , pp. 422-434
    • Sang, T.1    Zhong, Y.2
  • 121
    • 0031406079 scopus 로고    scopus 로고
    • Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae)
    • Sang T., Crawford D., Stuessy T. Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae). Am. J. Bot 1997, 84:1120.
    • (1997) Am. J. Bot , vol.84 , pp. 1120
    • Sang, T.1    Crawford, D.2    Stuessy, T.3
  • 122
    • 34347209089 scopus 로고    scopus 로고
    • Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication
    • Scannell D.R., Frank A.C., Conant G.C., Byrne K.P., Woolfit M., Wolfe K.H. Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication. Proc. Natl. Acad. Sci. USA 2007, 104:8397-8402.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 8397-8402
    • Scannell, D.R.1    Frank, A.C.2    Conant, G.C.3    Byrne, K.P.4    Woolfit, M.5    Wolfe, K.H.6
  • 123
    • 38649126905 scopus 로고    scopus 로고
    • A new species of Bashania Keng f. & Yi on western Yunnan
    • Shi J.Y., Yi T.P., Yao J., Yang L., Wang H.T. A new species of Bashania Keng f. & Yi on western Yunnan. China. Forest Res. 2007, 20:864-866.
    • (2007) China. Forest Res. , vol.20 , pp. 864-866
    • Shi, J.Y.1    Yi, T.P.2    Yao, J.3    Yang, L.4    Wang, H.T.5
  • 124
    • 0034350427 scopus 로고    scopus 로고
    • Gaps as characters in sequence-based phylogenetic analyses
    • Simmons M.P., Ochoterena H. Gaps as characters in sequence-based phylogenetic analyses. Syst. Biol. 2000, 49:369-381.
    • (2000) Syst. Biol. , vol.49 , pp. 369-381
    • Simmons, M.P.1    Ochoterena, H.2
  • 125
    • 0002594202 scopus 로고
    • Some evolutionary trends in the Bambusoideae (Poaceae)
    • Soderstrom T.R. Some evolutionary trends in the Bambusoideae (Poaceae). Ann. Missouri Bot. Gard. 1981, 68:15-47.
    • (1981) Ann. Missouri Bot. Gard. , vol.68 , pp. 15-47
    • Soderstrom, T.R.1
  • 126
    • 0000600204 scopus 로고
    • The position of bamboo genera and allies in a system of grass classification
    • Smithsonian Institution Press, Washington, DC, T.R. Soderstrom, K.W. Hilu, C.S. Campbell, M.E. Barkworth (Eds.)
    • Soderstrom T.R., Ellis R.P. The position of bamboo genera and allies in a system of grass classification. Grass Systematics and Evolution 1987, 225-238. Smithsonian Institution Press, Washington, DC. T.R. Soderstrom, K.W. Hilu, C.S. Campbell, M.E. Barkworth (Eds.).
    • (1987) Grass Systematics and Evolution , pp. 225-238
    • Soderstrom, T.R.1    Ellis, R.P.2
  • 127
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006, 22:2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 128
    • 0028025929 scopus 로고
    • The bamboos of Nepal and Bhutan part II: Arundinaria, Thamnocalamus, Borinda, and Yushania (Gramineae: Poaceae, bambusoideae)
    • Stapleton C.M.A. The bamboos of Nepal and Bhutan part II: Arundinaria, Thamnocalamus, Borinda, and Yushania (Gramineae: Poaceae, bambusoideae). Edinb. J. Bot. 1994, 51:275-295.
    • (1994) Edinb. J. Bot. , vol.51 , pp. 275-295
    • Stapleton, C.M.A.1
  • 129
    • 4944238640 scopus 로고    scopus 로고
    • Sarocalamus, a new Sino-Himalayan bamboo genus (Poaceae: Bambusoideae)
    • Stapleton C.M.A., Ní Chonghaile G., Hodkinson T.R. Sarocalamus, a new Sino-Himalayan bamboo genus (Poaceae: Bambusoideae). Novon 2004, 14:345-349.
    • (2004) Novon , vol.14 , pp. 345-349
    • Stapleton, C.M.A.1    Ní Chonghaile, G.2    Hodkinson, T.R.3
  • 131
    • 58149386206 scopus 로고    scopus 로고
    • Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s
    • Sungkaew S., Stapleton C.M.A., Salamin N., Hodkinson T.R. Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s. J. Plant Res. 2009, 122:95-108.
    • (2009) J. Plant Res. , vol.122 , pp. 95-108
    • Sungkaew, S.1    Stapleton, C.M.A.2    Salamin, N.3    Hodkinson, T.R.4
  • 133
    • 84862827821 scopus 로고    scopus 로고
    • PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4.0. b10. Sinauer, Sunderland, Massachusetts.
    • Swofford, D.L., 2002. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4.0. b10. Sinauer, Sunderland, Massachusetts.
    • (2002)
    • Swofford, D.L.1
  • 134
    • 34147151457 scopus 로고    scopus 로고
    • Poaceae in the greenhouses of the Botanic Garden of the Institute of Botany in Graz (Austria, Europe)
    • Teppner H. Poaceae in the greenhouses of the Botanic Garden of the Institute of Botany in Graz (Austria, Europe). Fritschiana (Graz) 2002, 31:1-42.
    • (2002) Fritschiana (Graz) , vol.31 , pp. 1-42
    • Teppner, H.1
  • 135
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J., Gibson T., Plewniak F., Jeanmougin F., Higgins D. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl. Acids Res. 1997, 25:4876-4882.
    • (1997) Nucl. Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.1    Gibson, T.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.5
  • 137
    • 77953325693 scopus 로고    scopus 로고
    • Phylogeny of the temperate bamboos (Poaceae: Bambusoideae: Bambuseae) with an emphasis on Arundinaria and allies
    • Triplett J.K., Clark L.G. Phylogeny of the temperate bamboos (Poaceae: Bambusoideae: Bambuseae) with an emphasis on Arundinaria and allies. Syst. Bot. 2010, 35:102-120.
    • (2010) Syst. Bot. , vol.35 , pp. 102-120
    • Triplett, J.K.1    Clark, L.G.2
  • 138
    • 33750539919 scopus 로고    scopus 로고
    • Hill cane (Arundinaria appalachiana), a new species of bamboo (Poaceae: Bambusoideae) from the southern Appalachian mountains
    • Triplett J.K., Weakley A.S., Clark L.G. Hill cane (Arundinaria appalachiana), a new species of bamboo (Poaceae: Bambusoideae) from the southern Appalachian mountains. Sida 2006, 22:79-95.
    • (2006) Sida , vol.22 , pp. 79-95
    • Triplett, J.K.1    Weakley, A.S.2    Clark, L.G.3
  • 139
    • 77649331120 scopus 로고    scopus 로고
    • Phylogenetic relationships and natural hybridization among the North American woody bamboos (Poaceae: Bambusoideae: Arundinaria)
    • Triplett J.K., Oltrogge K.A., Clark L.G. Phylogenetic relationships and natural hybridization among the North American woody bamboos (Poaceae: Bambusoideae: Arundinaria). Am. J. Bot. 2010, 97:471-492.
    • (2010) Am. J. Bot. , vol.97 , pp. 471-492
    • Triplett, J.K.1    Oltrogge, K.A.2    Clark, L.G.3
  • 140
    • 55249107104 scopus 로고    scopus 로고
    • Phylogeny of Nolana (Solanaceae) of the Atacama and Peruvian deserts inferred from sequences of four plastid markers and the nuclear LEAFY second intron
    • Tu T., Dillon M.O., Sun H., Wen J. Phylogeny of Nolana (Solanaceae) of the Atacama and Peruvian deserts inferred from sequences of four plastid markers and the nuclear LEAFY second intron. Mol. Phylogenet. Evol. 2008, 49:561-573.
    • (2008) Mol. Phylogenet. Evol. , vol.49 , pp. 561-573
    • Tu, T.1    Dillon, M.O.2    Sun, H.3    Wen, J.4
  • 141
    • 0024887164 scopus 로고
    • The system of grasses (Poaceae) and their evolution
    • Tzvelev N.N. The system of grasses (Poaceae) and their evolution. Bot. Rev. 1989, 55:141-204.
    • (1989) Bot. Rev. , vol.55 , pp. 141-204
    • Tzvelev, N.N.1
  • 142
    • 84862791748 scopus 로고
    • Karyological studies in Japanese bamboo. II. Further studies on chromosome numbers
    • Uchikawa I. Karyological studies in Japanese bamboo. II. Further studies on chromosome numbers. Jpn. J. Genet. 1935, 11:308-313.
    • (1935) Jpn. J. Genet. , vol.11 , pp. 308-313
    • Uchikawa, I.1
  • 143
    • 41049106881 scopus 로고    scopus 로고
    • Dealing with incongruence in the quest for the species tree: a case study from the orchid genus Satyrium
    • van der Niet T., Linder H.P. Dealing with incongruence in the quest for the species tree: a case study from the orchid genus Satyrium. Mol. Phylogenet. Evol. 2008, 47:154-174.
    • (2008) Mol. Phylogenet. Evol. , vol.47 , pp. 154-174
    • van der Niet, T.1    Linder, H.P.2
  • 144
    • 84862794974 scopus 로고
    • Taxonomic problems in Chinese scattered bamboos
    • Wang Z.P., Ye G.H. Taxonomic problems in Chinese scattered bamboos. Acta Phytotax. Sin. 1980, 18:283-290.
    • (1980) Acta Phytotax. Sin. , vol.18 , pp. 283-290
    • Wang, Z.P.1    Ye, G.H.2
  • 145
    • 67649485084 scopus 로고
    • Oligostachyum - a new genus of Chinese Bambusoideae
    • Wang Z.P., Ye G.H. Oligostachyum - a new genus of Chinese Bambusoideae. J. Nanjing Univ. (Nat. Sci.) 1982, 1:95-101.
    • (1982) J. Nanjing Univ. (Nat. Sci.) , vol.1 , pp. 95-101
    • Wang, Z.P.1    Ye, G.H.2
  • 146
    • 10244227525 scopus 로고
    • New taxa of Sinobambusa and others
    • Wen T.H. New taxa of Sinobambusa and others. J. Bamboo Res. 1987, 6:29-34.
    • (1987) J. Bamboo Res. , vol.6 , pp. 29-34
    • Wen, T.H.1
  • 147
    • 52249089019 scopus 로고
    • Some new bamboos from southern Yangtze river
    • Wen T.H. Some new bamboos from southern Yangtze river. J. Bamboo Res. 1989, 8:13-24.
    • (1989) J. Bamboo Res. , vol.8 , pp. 13-24
    • Wen, T.H.1
  • 148
    • 0000162362 scopus 로고    scopus 로고
    • Phylogenetic incongruence: window into genome history and molecular evolution
    • Kluwer, Boston, D.E. Soltis, P.S. Soltis, J.J. Doyle (Eds.)
    • Wendel J.F., Doyle J.J. Phylogenetic incongruence: window into genome history and molecular evolution. Molecular Systematics of Plants II: DNA Sequencing 1998, 265-296. Kluwer, Boston. D.E. Soltis, P.S. Soltis, J.J. Doyle (Eds.).
    • (1998) Molecular Systematics of Plants II: DNA Sequencing , pp. 265-296
    • Wendel, J.F.1    Doyle, J.J.2
  • 149
    • 28944442228 scopus 로고    scopus 로고
    • How much data are needed to resolve a difficult phylogeny? Case study in Lamiales
    • Wortley A.H., Rudall P.J., Harris D.J., Scotland R.W. How much data are needed to resolve a difficult phylogeny? Case study in Lamiales. Syst. Biol. 2005, 54:697-709.
    • (2005) Syst. Biol. , vol.54 , pp. 697-709
    • Wortley, A.H.1    Rudall, P.J.2    Harris, D.J.3    Scotland, R.W.4
  • 150
    • 52249124260 scopus 로고
    • A revision of the genus Arundinaria Michaux in China
    • Yang G.Y., Chao C.S. A revision of the genus Arundinaria Michaux in China. J. Bamboo Res. 1994, 13:1-23.
    • (1994) J. Bamboo Res. , vol.13 , pp. 1-23
    • Yang, G.Y.1    Chao, C.S.2
  • 151
    • 84862781191 scopus 로고
    • New taxa of bamboos from Sichuan
    • Yi T.P. New taxa of bamboos from Sichuan. Bull. Bot. Res. 1982, 2:99-111.
    • (1982) Bull. Bot. Res. , vol.2 , pp. 99-111
    • Yi, T.P.1
  • 152
    • 0010277571 scopus 로고
    • Classification and distribution of the food bamboos of the giant panda I
    • Yi T.P. Classification and distribution of the food bamboos of the giant panda I. J. Bamboo Res. 1985, 4:11-27.
    • (1985) J. Bamboo Res. , vol.4 , pp. 11-27
    • Yi, T.P.1
  • 153
    • 0010277571 scopus 로고
    • Classification and distribution of the food bamboos of the giant panda II
    • Yi T.P. Classification and distribution of the food bamboos of the giant panda II. J. Bamboo Res. 1985, 4:20-45.
    • (1985) J. Bamboo Res. , vol.4 , pp. 20-45
    • Yi, T.P.1
  • 154
    • 52249089122 scopus 로고
    • A new genus of Chinese bamboo - Menstruocalamus
    • Yi T.P. A new genus of Chinese bamboo - Menstruocalamus. J. Bamboo Res. 1992, 11:38-41.
    • (1992) J. Bamboo Res. , vol.11 , pp. 38-41
    • Yi, T.P.1
  • 155
    • 84862825380 scopus 로고    scopus 로고
    • A new species of Chimonocalamus Hsueh & Yi on west Yunnan China
    • Yi T.P., Shi J.Y., Ma L.S., Yang L., Yao J. A new species of Chimonocalamus Hsueh & Yi on west Yunnan China. Bull. Bot. Res. 2008, 28:133-135.
    • (2008) Bull. Bot. Res. , vol.28 , pp. 133-135
    • Yi, T.P.1    Shi, J.Y.2    Ma, L.S.3    Yang, L.4    Yao, J.5
  • 156
    • 67650145856 scopus 로고    scopus 로고
    • Patterns of hybridization and introgression between invasive Ulmus pumila (Ulmaceae) and native U. rubra
    • Zalapa J.E., Brunet J., Guries R.P. Patterns of hybridization and introgression between invasive Ulmus pumila (Ulmaceae) and native U. rubra. Am. J. Bot. 2009, 96:1116-1128.
    • (2009) Am. J. Bot. , vol.96 , pp. 1116-1128
    • Zalapa, J.E.1    Brunet, J.2    Guries, R.P.3
  • 157
    • 77953325567 scopus 로고    scopus 로고
    • Large multi-locus plastid phylogeny of the tribe Arundinarieae (Poaceae: Bambusoideae) reveals ten major lineages and low rate of molecular divergence
    • Zeng C.X., Zhang Y.X., Triplett J.K., Yang J.B., Li D.Z. Large multi-locus plastid phylogeny of the tribe Arundinarieae (Poaceae: Bambusoideae) reveals ten major lineages and low rate of molecular divergence. Mol. Phylogenet. Evol. 2010, 56:821-839.
    • (2010) Mol. Phylogenet. Evol. , vol.56 , pp. 821-839
    • Zeng, C.X.1    Zhang, Y.X.2    Triplett, J.K.3    Yang, J.B.4    Li, D.Z.5
  • 158
    • 0034022498 scopus 로고    scopus 로고
    • Phylogeny of the grass family (Poaceae) from rpl16 intron sequence data
    • Zhang W. Phylogeny of the grass family (Poaceae) from rpl16 intron sequence data. Mol. Phylogenet. Evol. 2000, 15:135-146.
    • (2000) Mol. Phylogenet. Evol. , vol.15 , pp. 135-146
    • Zhang, W.1
  • 159
    • 79957814250 scopus 로고    scopus 로고
    • High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae)
    • Zhang Y.J., Ma P.F., Li D.Z. High-throughput sequencing of six bamboo chloroplast genomes: phylogenetic implications for temperate woody bamboos (Poaceae: Bambusoideae). PLoS ONE 2011, 6(5):e20596.
    • (2011) PLoS ONE , vol.6 , Issue.5
    • Zhang, Y.J.1    Ma, P.F.2    Li, D.Z.3
  • 160
    • 77954310696 scopus 로고    scopus 로고
    • Distribution and diversity of PIF-like transposable elements in the Bambusoideae subfamily
    • Zhou M.B., Lu J.J., Zhong H., Liu X.M., Tang D.Q. Distribution and diversity of PIF-like transposable elements in the Bambusoideae subfamily. Plant Sci. 2010, 179:257-266.
    • (2010) Plant Sci. , vol.179 , pp. 257-266
    • Zhou, M.B.1    Lu, J.J.2    Zhong, H.3    Liu, X.M.4    Tang, D.Q.5
  • 162
    • 65249164777 scopus 로고    scopus 로고
    • Conflicting gene trees and phylogenomics
    • Zou X.H., Ge S. Conflicting gene trees and phylogenomics. J. Syst. Evol. 2008, 46:795-807.
    • (2008) J. Syst. Evol. , vol.46 , pp. 795-807
    • Zou, X.H.1    Ge, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.