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Volumn 113, Issue 3, 2000, Pages 259-269

A comparison of ITS nuclear rDNA sequence data and AFLP markers for phylogenetic studies in Phyllostachys (Bambusoideae, Poaceae)

Author keywords

AFLP; Bambusoideae; ITS; Molecular; Phyllostachys; Phylogeny; Poaceae

Indexed keywords

BAMBUSA; BAMBUSOIDEAE; CHIMONOBAMBUSA; PHYLLOSTACHYS; PHYLLOSTACHYS ACUTA; POACEAE;

EID: 0034360457     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/pl00013936     Document Type: Review
Times cited : (103)

References (55)
  • 1
    • 0026822377 scopus 로고
    • Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: An example from the Compositae
    • Baldwin, B.C. 1992. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae. Molec. Phylogenetics Evol. 1, 1: 3-16.
    • (1992) Molec. Phylogenetics Evol. , vol.1 , Issue.1 , pp. 3-16
    • Baldwin, B.C.1
  • 3
    • 0002626601 scopus 로고
    • Evolutionary change at the 5S DNA loci of species in the Triticeae
    • Baum, B.R. and Appels, R. 1992. Evolutionary change at the 5S DNA loci of species in the Triticeae. Plant Syst. Evol. 183: 195-208.
    • (1992) Plant Syst. Evol. , vol.183 , pp. 195-208
    • Baum, B.R.1    Appels, R.2
  • 4
    • 0029976001 scopus 로고    scopus 로고
    • Zea systematics: Ribosomal ITS evidence
    • Buckler, E.S. and Holtsford, T.P. 1996. Zea systematics: ribosomal ITS evidence. Molec. Biol. Evol. 13, 4: 612-622.
    • (1996) Molec. Biol. Evol. , vol.13 , Issue.4 , pp. 612-622
    • Buckler, E.S.1    Holtsford, T.P.2
  • 8
    • 0003130311 scopus 로고
    • A biochemical aspect of phylogenetic study of Bambusaceae in Taiwan. Part 1 The genus Phyllostachys
    • Chou, C.H., Young, C.M. and Sheen, S.S. 1984. A biochemical aspect of phylogenetic study of Bambusaceae in Taiwan. Part 1 The genus Phyllostachys. Proceedings of the National Science Council ROC(B). 8: 89-98.
    • (1984) Proceedings of the National Science Council ROC(B) , vol.8 , pp. 89-98
    • Chou, C.H.1    Young, C.M.2    Sheen, S.S.3
  • 9
    • 0029188719 scopus 로고
    • A phylogeny of the grass family (Poaceae) based on ndhF sequence data
    • Clark, L.G., Weiping, Z. and Wendel, J.F. 1995. A phylogeny of the grass family (Poaceae) based on ndhF sequence data. Syst. Bot. 20, 4: 436-460.
    • (1995) Syst. Bot. , vol.20 , Issue.4 , pp. 436-460
    • Clark, L.G.1    Weiping, Z.2    Wendel, J.F.3
  • 11
    • 0000791717 scopus 로고
    • Use of the polymerase chain reaction to detect spacer size heterogeneity in plant 5S-rRNA gene clusters and to locate such clusters in wheat (Triticum aestivum L.)
    • Cox, A.V., Bennett, M.D. and Dyer, T.A. 1992. Use of the polymerase chain reaction to detect spacer size heterogeneity in plant 5S-rRNA gene clusters and to locate such clusters in wheat (Triticum aestivum L.). Theor. Appl. Genet. 83: 684-690.
    • (1992) Theor. Appl. Genet. , vol.83 , pp. 684-690
    • Cox, A.V.1    Bennett, M.D.2    Dyer, T.A.3
  • 12
    • 0002279360 scopus 로고
    • Anatomical studies on the rhizome of some monopodial bamboos
    • Ding, Y., Grosser, D., Liese, W. and Hsiung, W. 1993. Anatomical studies on the rhizome of some monopodial bamboos. Chinese J. Bot. 5, 2: 122-129.
    • (1993) Chinese J. Bot. , vol.5 , Issue.2 , pp. 122-129
    • Ding, Y.1    Grosser, D.2    Liese, W.3    Hsiung, W.4
  • 13
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle, J.J. and Doyle, J.L. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. Bot. Soc. Amer. 19: 11-15.
    • (1987) Phytochem. Bull. Bot. Soc. Amer. , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 14
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 15
    • 0028259170 scopus 로고
    • A study of genetic variation and evolution of Phyllostachys (Bambusoideae: Poaceae) using nuclear restriction fragment length polymorphisms
    • Friar, E. and Kochert, G. 1994. A study of genetic variation and evolution of Phyllostachys (Bambusoideae: Poaceae) using nuclear restriction fragment length polymorphisms. Theor. Appl. Genet. 89: 265-270.
    • (1994) Theor. Appl. Genet. , vol.89 , pp. 265-270
    • Friar, E.1    Kochert, G.2
  • 17
    • 0002374136 scopus 로고
    • Bamboo and biotechnology
    • Gielis, J. 1995. Bamboo and Biotechnology. Eur. Bamboo Soc. J. 1995: 27-39.
    • (1995) Eur. Bamboo Soc. J. , vol.1995 , pp. 27-39
    • Gielis, J.1
  • 18
    • 0000782702 scopus 로고    scopus 로고
    • Genetic variability and relationships in Phyllostachys using random amplified polymorphic DNA
    • G.P. Chapman, ed.
    • Gielis, J., Everaert, I. and De Loose, M. 1997. Genetic variability and relationships in Phyllostachys using random amplified polymorphic DNA. In G.P. Chapman, ed., The Bamboos: Linn. Soc. Symp. Ser. 19: 107-124.
    • (1997) The Bamboos: Linn. Soc. Symp. Ser. , vol.19 , pp. 107-124
    • Gielis, J.1    Everaert, I.2    De Loose, M.3
  • 20
    • 0029110589 scopus 로고
    • Molecular phylogeny of the Pooideae (Poaceae) based on nuclear rDNA (ITS) sequences
    • Hsiao, C., Chatterton, N.J., Asay, K.H. and Jensen, K.B. 1995a. Molecular phylogeny of the Pooideae (Poaceae) based on nuclear rDNA (ITS) sequences. Theor. Appl. Genet. 90: 389-398.
    • (1995) Theor. Appl. Genet. , vol.90 , pp. 389-398
    • Hsiao, C.1    Chatterton, N.J.2    Asay, K.H.3    Jensen, K.B.4
  • 21
    • 0029278663 scopus 로고
    • Phylogenetic relationships of the monogenomic species of the wheat tribe, Triticeae (Poaceae), inferred from nuclear rDNA (internal transcribed spacer) sequences
    • Hsiao, C., Chatterton, N.J., Asay, K.H. and Jensen, K.B. 1995b. Phylogenetic relationships of the monogenomic species of the wheat tribe, Triticeae (Poaceae), inferred from nuclear rDNA (internal transcribed spacer) sequences. Genome 38: 211-223.
    • (1995) Genome , vol.38 , pp. 211-223
    • Hsiao, C.1    Chatterton, N.J.2    Asay, K.H.3    Jensen, K.B.4
  • 22
    • 0033617301 scopus 로고    scopus 로고
    • A molecular phylogeny of the grass family (Poaceae) based on the sequences of nuclear ribosomal DNA (ITS)
    • Hsiao, C., Jacobs, S.W.L., Chatterton, N.J. and Asay, K.H. 1999. A molecular phylogeny of the grass family (Poaceae) based on the sequences of nuclear ribosomal DNA (ITS). Austral. Syst. Bot. 11: 667-668.
    • (1999) Austral. Syst. Bot. , vol.11 , pp. 667-668
    • Hsiao, C.1    Jacobs, S.W.L.2    Chatterton, N.J.3    Asay, K.H.4
  • 23
    • 0002386933 scopus 로고
    • An application of isozymes in identification of species of Phyllostachys
    • Huang, M.R., Chen, D.M. and Xu, N. 1983. An application of isozymes in identification of species of Phyllostachys. Bamboo Research 2, 1: 132-136.
    • (1983) Bamboo Research , vol.2 , Issue.1 , pp. 132-136
    • Huang, M.R.1    Chen, D.M.2    Xu, N.3
  • 24
    • 0029660936 scopus 로고    scopus 로고
    • Molecular techniques in the assessment of botanical diversity
    • Karp, A., Seberg, O. and Buiatti, M. 1996. Molecular techniques in the assessment of botanical diversity. Ann. Bot. 78: 143-149.
    • (1996) Ann. Bot. , vol.78 , pp. 143-149
    • Karp, A.1    Seberg, O.2    Buiatti, M.3
  • 25
    • 0003421005 scopus 로고    scopus 로고
    • Sinauer Associates, Sunderland MA
    • Li, W-H. 1997. Molecular Evolution. Sinauer Associates, Sunderland MA.
    • (1997) Molecular Evolution
    • Li, W.-H.1
  • 26
    • 0030471846 scopus 로고    scopus 로고
    • Comparative analysis of the genetic diversity in pea assessed by RFLP-and PCR-based methods
    • Lu, J.M.R., Ambrose, M.J., Brown, J.K.M. and Ellis, T.H.N. 1996. Comparative analysis of the genetic diversity in pea assessed by RFLP-and PCR-based methods. Theor. Appl. Genet. 93: 1103-1111.
    • (1996) Theor. Appl. Genet. , vol.93 , pp. 1103-1111
    • Lu, J.M.R.1    Ambrose, M.J.2    Brown, J.K.M.3    Ellis, T.H.N.4
  • 27
    • 0030268112 scopus 로고    scopus 로고
    • Level of polymorphism and genetic mapping of AFLP markers in rice
    • Mackill, D.J., Zhang, Z, Redona, E.D. and Colowit, P.M. 1996. Level of polymorphism and genetic mapping of AFLP markers in rice. Genome 39, 5: 969-977.
    • (1996) Genome , vol.39 , Issue.5 , pp. 969-977
    • Mackill, D.J.1    Zhang, Z.2    Redona, E.D.3    Colowit, P.M.4
  • 28
    • 3643140090 scopus 로고
    • Bamboos of the genus Phyllostachys under cultivation in the United States
    • McClure, F.A. 1957. Bamboos of the genus Phyllostachys under cultivation in the United States. United States Department of Agriculture Handbook 114.
    • (1957) United States Department of Agriculture Handbook , vol.114
    • McClure, F.A.1
  • 29
    • 0033214958 scopus 로고    scopus 로고
    • AFLP genotyping and fingerprinting
    • Mueller, U.G. and Wolfenbarger, L. 1999. AFLP genotyping and fingerprinting. Trends Ecol. Evol. 14, 10: 389-394.
    • (1999) Trends Ecol. Evol. , vol.14 , Issue.10 , pp. 389-394
    • Mueller, U.G.1    Wolfenbarger, L.2
  • 30
    • 0002280117 scopus 로고
    • Bambusaceae in Japan proper II
    • Nakai, T. 1933. Bambusaceae in Japan proper II. J. Jap. Bot. 9: 77-95.
    • (1933) J. Jap. Bot. , vol.9 , pp. 77-95
    • Nakai, T.1
  • 34
    • 0031056253 scopus 로고    scopus 로고
    • Diversity and genetic differentiation among populations of Indian and Kenyan tea (Camellia sinensis (L.) O. Kuntze) revealed by AFLP markers
    • Paul, S., Wachira, F.N., Powell, W. and Waugh, R. 1997. Diversity and genetic differentiation among populations of Indian and Kenyan tea (Camellia sinensis (L.) O. Kuntze) revealed by AFLP markers. Theor. Appl. Genet. 94: 255-263.
    • (1997) Theor. Appl. Genet. , vol.94 , pp. 255-263
    • Paul, S.1    Wachira, F.N.2    Powell, W.3    Waugh, R.4
  • 35
    • 0031958526 scopus 로고    scopus 로고
    • Use of locus specific markers to construct a high density map of barley
    • Qi, X., Stam, P. and Lindhout, P. 1998. Use of locus specific markers to construct a high density map of barley. Theor. Appl. Genet. 96: 376-384.
    • (1998) Theor. Appl. Genet. , vol.96 , pp. 376-384
    • Qi, X.1    Stam, P.2    Lindhout, P.3
  • 36
    • 0032424439 scopus 로고    scopus 로고
    • Genome size is negatively correlated with altitude in natural populations of Dactylis glomerata
    • Reeves, G., Francis, D., Davies, M.S., Rogers, H.J. and Hodkinson, T.R. 1998. Genome size is negatively correlated with altitude in natural populations of Dactylis glomerata. Ann. Bot. 82 (supplement A): 99-105.
    • (1998) Ann. Bot. , vol.82 , Issue.SUPPL. A , pp. 99-105
    • Reeves, G.1    Francis, D.2    Davies, M.S.3    Rogers, H.J.4    Hodkinson, T.R.5
  • 38
    • 0032993398 scopus 로고    scopus 로고
    • Use of AFLP in cereals research
    • Ridout, C.J. and Donini, P. 1999. Use of AFLP in cereals research. Trends Plant. Sci. 4, 2: 76-79.
    • (1999) Trends Plant. Sci. , vol.4 , Issue.2 , pp. 76-79
    • Ridout, C.J.1    Donini, P.2
  • 39
    • 0001907141 scopus 로고
    • Phylogenetic consequences of cytoplasmic gene flow in plants
    • Riesberg, L.H. and Soltis, D.E. 1991. Phylogenetic consequences of cytoplasmic gene flow in plants. Evol. Trends Plant 5, 1: 65-84.
    • (1991) Evol. Trends Plant , vol.5 , Issue.1 , pp. 65-84
    • Riesberg, L.H.1    Soltis, D.E.2
  • 41
    • 0030460917 scopus 로고    scopus 로고
    • AFLP analysis of the diversity and phylogeny of Lens and its comparison with RAPD analysis
    • Sharma, S.K., Knox, M.R. and Ellis, T.H.N. 1996. AFLP analysis of the diversity and phylogeny of Lens and its comparison with RAPD analysis. Theor. Appl. Genet. 93: 751-758.
    • (1996) Theor. Appl. Genet. , vol.93 , pp. 751-758
    • Sharma, S.K.1    Knox, M.R.2    Ellis, T.H.N.3
  • 42
    • 0002280121 scopus 로고
    • Plantarium quas in Japonia Collegit Dr. PF Siebold genera nova
    • Siebold, P.F. and Zuccarini, J.G. 1843. Plantarium quas in Japonia Collegit Dr. PF Siebold genera nova. Abhandl. Bayer. Akad. Wiss. 3: 745-749.
    • (1843) Abhandl. Bayer. Akad. Wiss. , vol.3 , pp. 745-749
    • Siebold, P.F.1    Zuccarini, J.G.2
  • 43
    • 0000600204 scopus 로고
    • The position of the bamboo genera and allies in a system of grass classification
    • T.R. Soderstrom, K.W. Hilu, C.S. Campbell and M.E. Barkworth, eds., Smithsonian Institution Press, Washington DC
    • Soderstrom, T.R. and Ellis, R.P. 1987. The position of the bamboo genera and allies in a system of grass classification. In T.R. Soderstrom, K.W. Hilu, C.S. Campbell and M.E. Barkworth, eds., Grass Systematics and Evolution. Smithsonian Institution Press, Washington DC pp. 225-338.
    • (1987) Grass Systematics and Evolution , pp. 225-338
    • Soderstrom, T.R.1    Ellis, R.P.2
  • 44
    • 0001315728 scopus 로고    scopus 로고
    • The morphology of woody bamboos
    • G.P. Chapman, ed.
    • Stapleton, C.M.A. 1997. The morphology of woody bamboos. In G.P. Chapman, ed., The Bamboos: Linn. Soc. Symp. Ser. 19: 251-267.
    • (1997) The Bamboos: Linn. Soc. Symp. Ser. , vol.19 , pp. 251-267
    • Stapleton, C.M.A.1
  • 45
    • 0027952288 scopus 로고
    • Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA
    • Sun, Y., Skinner, D.Z., Liang, G.H. and Hulbert, S.H. 1994. Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA. Theor. Appl. Genet. 89: 26-32.
    • (1994) Theor. Appl. Genet. , vol.89 , pp. 26-32
    • Sun, Y.1    Skinner, D.Z.2    Liang, G.H.3    Hulbert, S.H.4
  • 47
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • D.M. Hillis, C. Moritz and B.K. Mable, eds., Sinauer Associates
    • Swofford, D.L., Olsen, G.J., Waddell, P.J. and Hillis, D.M. 1996. Phylogenetic inference. In D.M. Hillis, C. Moritz and B.K. Mable, eds., Molecular Systematics, Sinauer Associates, pp. 507-514.
    • (1996) Molecular Systematics , pp. 507-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4
  • 49
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive sequence alignment through sequence weighting, position, specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G. and Gibson, T.J. 1995. CLUSTAL W: improving the sensitivity of progressive sequence alignment through sequence weighting, position, specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1995) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 53
    • 21844499673 scopus 로고
    • Chloroplast DNA phytogeny of the Asian bamboos (Bambusoideae, Poaceae) and its systematic implication
    • Watanabe, M., Ito, M. and Kurita, S. 1994. Chloroplast DNA phytogeny of the Asian bamboos (Bambusoideae, Poaceae) and its systematic implication. J. Plant Res. 107: 253-261
    • (1994) J. Plant Res. , vol.107 , pp. 253-261
    • Watanabe, M.1    Ito, M.2    Kurita, S.3


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