The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools

Nucleic Acids Research

Volumn 25, Issue 24, 1997, Pages 4876-4882

  Thompson, Julie D ^a   Gibson, Toby J ^b   Plewniak, Frédéric ^a   Jeanmougin, François ^a   Higgins, Desmond G ^c  

^a INSTITUT DE GÉNÉTIQUE ET DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

^b EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^c NONE

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; NUCLEIC ACID;

ALGORITHM; ARTICLE; COMPUTER INTERFACE; COMPUTER PROGRAM; ERROR; GENE SEQUENCE; GENETIC PROCEDURES; PRIORITY JOURNAL; PROTEIN ANALYSIS;

ALGORITHMS; AMINO ACID SEQUENCE; DATA DISPLAY; MOLECULAR SEQUENCE DATA; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, NUCLEIC ACID; USER-COMPUTER INTERFACE;

EID: 0031574072     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.24.4876     Document Type: Article

References (27)

1. Feng,D.F. and Doolittle,R.F. (1987) J. Mol. Evol., 25, 351-360.
2. Taylor,W.R. (1988) J. Mol. Evol., 28, 161-169.
3. Stockwell,P.A. and Peterson,G.B. (1987) Comput. Applic. Biosci., 3, 37-43.
4. Thirup,S. and Larsen,N.E. (1990) Proteins, 7, 291-295.
5. Clark,S.P. (1992) Comput. Applic. Biosci., 8, 535-538.
6. De Rijk,P. and De Wachter,R. (1993) Comput. Applic. Biosci., 9, 735-740.
7. Galtier,N., Gouy,M. and Gautier,C. (1996) Comput. Applic. Biosci., 12, 543-548.
8. Higgins,D.G. and Sharp,P.M. (1988) Gene, 1, 237-244.
9. Higgins,D.G., Bleasby,A.J. and Fuchs,R. (1992) Comput. Applic. Biosci., 8, 189-191.
10. Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) Nucleic Acids Res., 22, 4673-4680.
11. Higgins,D.G., Thompson, J.D. and Gibson,T.J. (1996) Methods Enzymol., 266, 383-402.
12. Vingron, M. and Sibbald, P.R. (1993) Proc. Natl. Acad. Sci. USA, 90, 8777-8781.
13. Henikoff,S. and Henikoff,J.G. (1994) J. Mol. Biol., 243, 574-578.
14. Thompson,J.D., Higgins,D.G. and Gibson,T.J. (1994) Comput. Applic. Biosci., 10, 19-29.
15. Benner,S.A., Cohen,M.A. and Gonnet,G.H. (1994) Protein Engng, 7, 1323-1332.
16. Notredame,C. and Higgins,D.G. (1996) Nucleic Acids Res., 24, 1515-1524.
17. Gotoh,O. (1996) J. Mol. Biol., 264, 823-838.
18. Parry-Smith,D.J. and Attwood,T.K. (1991) Comput. Applic. Biosci., 7, 233-235.
19. Zvelebil,M.J.J.M., Barton,G.J., Taylor,W.R. and Stemberg,M.J.E. (1987) J. Mol. Biol., 195, 957-961.
20. Smith,R.F. and Smith,T.F. (1990) Proc. Natl. Acad. Sci. USA, 87, 118-122.
21. Sander,C. and Schneider,R. (1991) Proteins Struct. Funct. Genet., 9, 56-68.
22. Brouillet,S., Risler,J.L., Henaut,A. and Slonimski,P.P. (1992) Biochimie, 74, 571-580.
23. Birney,E., Thompson,J.D. and Gibson,T.J. (1996) Nucleic Acids Res., 24, 2730-2739.
24. Schuler,G.D., Altschul,S.F. and Lipman,D.J. (1991) Proteins Struct. Funct. Genet., 9, 180-190.
25. Vingron,M. and Argos,P. (1991) J. Mol. Biol., 218, 33-43.
26. Friemann,A. and Schmitz,S. (1992) Comput. Applic. Biosci., 8, 261-265.
27. Livingstone,C.D. and Barton,G.J. (1993) Comput. Applic. Biosci., 9, 745-756.