-
1
-
-
45849095711
-
Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing
-
DOI 10.1073/pnas.0800334105
-
Azuma-Mukai A, Oguri H, Mituyama T, Qian ZR, Asai K, Siomi H, Siomi MC. 2008. Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing. Proc Natl Acad Sci USA 105:7964-7969. (Pubitemid 351904690)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.23
, pp. 7964-7969
-
-
Azuma-Mukai, A.1
Oguri, H.2
Mituyama, T.3
Zhi, R.Q.4
Asai, K.5
Siomi, H.6
Siomi, M.C.7
-
2
-
-
77954214431
-
Crystal structure and ligand binding of the MID domain of a eukaryotic Argonaute protein
-
Boland A, Tritschler F, Heimstadt S, Izaurralde E, Weichenrieder O. 2010. Crystal structure and ligand binding of the MID domain of a eukaryotic Argonaute protein. EMBO Rep 11:522-527.
-
(2010)
EMBO Rep
, vol.11
, pp. 522-527
-
-
Boland, A.1
Tritschler, F.2
Heimstadt, S.3
Izaurralde, E.4
Weichenrieder, O.5
-
3
-
-
60149088848
-
Origins and mechanisms of miRNAs and siRNAs
-
Carthew RW, Sontheimer EJ. 2009. Origins and mechanisms of miRNAs and siRNAs. Cell 136:642-655.
-
(2009)
Cell
, vol.136
, pp. 642-655
-
-
Carthew, R.W.1
Sontheimer, E.J.2
-
4
-
-
33947641533
-
cutoff and aubergine Mutations Result in Retrotransposon Upregulation and Checkpoint Activation in Drosophila
-
DOI 10.1016/j.cub.2007.02.027, PII S0960982207010044
-
Chen Y, Pane A, Schupbach T. 2007. Cutoff and aubergine mutations result in retrotransposon upregulation and checkpoint activation in Drosophila. Curr Biol 17:637-642. (Pubitemid 46497794)
-
(2007)
Current Biology
, vol.17
, Issue.7
, pp. 637-642
-
-
Chen, Y.1
Pane, A.2
Schupbach, T.3
-
5
-
-
78649874963
-
Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter
-
Chu Y, Yue X, Younger ST, Janowski BA, Corey DR. 2010. Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter. Nucleic Acids Res 38:7736-7748.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 7736-7748
-
-
Chu, Y.1
Yue, X.2
Younger, S.T.3
Janowski, B.A.4
Corey, D.R.5
-
7
-
-
78650306521
-
Small RNA sorting: Matchmaking for Argonautes
-
Czech B, Hannon GJ. 2011. Small RNA sorting: Matchmaking for Argonautes. Nat Rev Genet 12:19-31.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 19-31
-
-
Czech, B.1
Hannon, G.J.2
-
8
-
-
76349106891
-
Allosteric regulation of Argonaute proteins by miRNAs
-
Djuranovic S, Zinchenko MK, Hur JK, Nahvi A, Brunelle JL, Rogers EJ, Green R. 2010. Allosteric regulation of Argonaute proteins by miRNAs. Nat Struct Mol Biol 17:144-150.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 144-150
-
-
Djuranovic, S.1
Zinchenko, M.K.2
Hur, J.K.3
Nahvi, A.4
Brunelle, J.L.5
Rogers, E.J.6
Green, R.7
-
9
-
-
77955056301
-
Argonaute MID domain takes centre stage
-
Faehnle CR, Joshua-Tor L. 2010. Argonaute MID domain takes centre stage. EMBO Rep 11:564-565.
-
(2010)
EMBO Rep
, vol.11
, pp. 564-565
-
-
Faehnle, C.R.1
Joshua-Tor, L.2
-
10
-
-
22144489833
-
RNAi: The nuts and bolts of the RISC machine
-
DOI 10.1016/j.cell.2005.06.023, PII S0092867405006422
-
Filipowicz W. 2005. RNAi: The nuts and bolts of the RISC machine. Cell 122:17-20. (Pubitemid 40977936)
-
(2005)
Cell
, vol.122
, Issue.1
, pp. 17-20
-
-
Filipowicz, W.1
-
11
-
-
77953479619
-
Structural basis for 5′-nucleotide base-specific recognition of guide RNA by human AGO2
-
Frank F, Sonenberg N, Nagar B. 2010. Structural basis for 5′-nucleotide base-specific recognition of guide RNA by human AGO2. Nature 465:818-822.
-
(2010)
Nature
, vol.465
, pp. 818-822
-
-
Frank, F.1
Sonenberg, N.2
Nagar, B.3
-
12
-
-
79955548475
-
Structural analysis of 5′-mRNA-cap interactions with the human AGO2 MID domain
-
Frank F, Fabian MR, Stepinski J, Jemielity J, Darzynkiewicz E, Sonenberg N, Nagar B. 2011. Structural analysis of 5′-mRNA-cap interactions with the human AGO2 MID domain. EMBO Rep 12:415-420.
-
(2011)
EMBO Rep
, vol.12
, pp. 415-420
-
-
Frank, F.1
Fabian, M.R.2
Stepinski, J.3
Jemielity, J.4
Darzynkiewicz, E.5
Sonenberg, N.6
Nagar, B.7
-
13
-
-
0029004903
-
Crystal structure of lac repressor core tetramer and its implications for DNA looping
-
Friedman AM, Fischmann TO, Steitz TA. 1995. Crystal structure of lac repressor core tetramer and its implications for DNA looping. Science 268:1721-1727.
-
(1995)
Science
, vol.268
, pp. 1721-1727
-
-
Friedman, A.M.1
Fischmann, T.O.2
Steitz, T.A.3
-
14
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
-
DOI 10.1002/elps.1150181505
-
Guex N, Peitsch MC. 1997. SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling. Electrophoresis 18:2714-2723. (Pubitemid 28059943)
-
(1997)
Electrophoresis
, vol.18
, Issue.15
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
15
-
-
26444581314
-
Structure and function of argonaute proteins
-
DOI 10.1016/j.str.2005.08.005, PII S0969212605003059
-
Hall TM. 2005. Structure and function of argonaute proteins. Structure 13:1403-1408. (Pubitemid 41427580)
-
(2005)
Structure
, vol.13
, Issue.10
, pp. 1403-1408
-
-
Hall, T.M.T.1
-
16
-
-
0034673638
-
An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells
-
DOI 10.1038/35005107
-
Hammond SM, Bernstein E, Beach D, Hannon GJ. 2000. An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells. Nature 404:293-296. (Pubitemid 30163547)
-
(2000)
Nature
, vol.404
, Issue.6775
, pp. 293-296
-
-
Hammond, S.M.1
Bernstein, E.2
Beach, D.3
Hannon, G.J.4
-
17
-
-
79551631627
-
An antiviral defense role of AGO2 in plants
-
Harvey JJ, Lewsey MG, Patel K, Westwood J, Heimstadt S, Carr JP, Baulcombe DC. 2011. An antiviral defense role of AGO2 in plants. PLoS ONE 6:e14639.
-
(2011)
PLoS ONE
, vol.6
-
-
Harvey, J.J.1
Lewsey, M.G.2
Patel, K.3
Westwood, J.4
Heimstadt, S.5
Carr, J.P.6
Baulcombe, D.C.7
-
18
-
-
77950342461
-
The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci
-
Havecker ER, Wallbridge LM, Hardcastle TJ, Bush MS, Kelly KA, Dunn RM, Schwach F, Doonan JH, Baulcombe DC. 2010. The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci. Plant Cell 22:321-334.
-
(2010)
Plant Cell
, vol.22
, pp. 321-334
-
-
Havecker, E.R.1
Wallbridge, L.M.2
Hardcastle, T.J.3
Bush, M.S.4
Kelly, K.A.5
Dunn, R.M.6
Schwach, F.7
Doonan, J.H.8
Baulcombe, D.C.9
-
19
-
-
43549096196
-
The Argonaute protein family
-
Höck J, Meister G. 2008. The Argonaute protein family. Genome Biol 9:210.
-
(2008)
Genome Biol
, vol.9
, pp. 210
-
-
Höck, J.1
Meister, G.2
-
20
-
-
54349089563
-
Zili is required for germ cell differentiation and meiosis in zebrafish
-
Houwing S, Berezikov E, Ketting RF. 2008. Zili is required for germ cell differentiation and meiosis in zebrafish. EMBO J 27:2702-2711.
-
(2008)
EMBO J
, vol.27
, pp. 2702-2711
-
-
Houwing, S.1
Berezikov, E.2
Ketting, R.F.3
-
21
-
-
37549014207
-
Argonaute proteins: Key players in RNA silencing
-
Hutvagner G, Simard MJ. 2008. Argonaute proteins: Key players in RNA silencing. Nat Rev Mol Cell Biol 9:22-32.
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, pp. 22-32
-
-
Hutvagner, G.1
Simard, M.J.2
-
22
-
-
33748089700
-
Argonaute slicing is required for heterochromatic silencing and spreading
-
DOI 10.1126/science.1128813
-
Irvine DV, Zaratiegui M, Tolia NH, Goto DB, Chitwood DH, Vaughn MW, Joshua-Tor L, Martienssen RA. 2006. Argonaute slicing is required for heterochromatic silencing and spreading. Science 313:1134-1137. (Pubitemid 44300241)
-
(2006)
Science
, vol.313
, Issue.5790
, pp. 1134-1137
-
-
Irvine, D.V.1
Zaratiegui, M.2
Tolia, N.H.3
Goto, D.B.4
Chitwood, D.H.5
Vaughn, M.W.6
Joshua-Tor, L.7
Martienssen, R.A.8
-
23
-
-
33748339362
-
Involvement of AGO1 and AGO2 in mammalian transcriptional silencing
-
DOI 10.1038/nsmb1140, PII NSMB1140
-
Janowski BA, Huffman KE, Schwartz JC, Ram R, Nordsell R, Shames DS, Minna JD, Corey DR. 2006. Involvement of AGO1 and AGO2 in mammalian transcriptional silencing. Nat Struct Mol Biol 13:787-792. (Pubitemid 44338772)
-
(2006)
Nature Structural and Molecular Biology
, vol.13
, Issue.9
, pp. 787-792
-
-
Janowski, B.A.1
Huffman, K.E.2
Schwartz, J.C.3
Ram, R.4
Nordsell, R.5
Shames, D.S.6
Minna, J.D.7
Corey, D.R.8
-
24
-
-
58749113430
-
A three-dimensional view of the molecular machinery of RNA interference
-
Jinek M, Doudna JA. 2009. A three-dimensional view of the molecular machinery of RNA interference. Nature 457:405-412.
-
(2009)
Nature
, vol.457
, pp. 405-412
-
-
Jinek, M.1
Doudna, J.A.2
-
26
-
-
61349132102
-
The human Ago2 MC region does not contain an eIF4E-like mRNA cap binding motif
-
Kinch LN, Grishin NV. 2009. The human Ago2 MC region does not contain an eIF4E-like mRNA cap binding motif. Biol Direct 4:2.
-
(2009)
Biol Direct
, vol.4
, pp. 2
-
-
Kinch, L.N.1
Grishin, N.V.2
-
27
-
-
34250017082
-
7G Cap Binding-like Motif within Human Ago2 Represses Translation
-
DOI 10.1016/j.cell.2007.05.016, PII S0092867407006538
-
Kiriakidou M, Tan GS, Lamprinaki S, De Planell-Saguer M, Nelson PT, Mourelatos Z. 2007. An mRNA m7G cap binding-like motif within human Ago2 represses translation. Cell 129:1141-1151. (Pubitemid 46891041)
-
(2007)
Cell
, vol.129
, Issue.6
, pp. 1141-1151
-
-
Kiriakidou, M.1
Tan, G.S.2
Lamprinaki, S.3
De Planell-Saguer, M.4
Nelson, P.T.5
Mourelatos, Z.6
-
28
-
-
77951887861
-
Characterization of RNase HII substrate recognition using RNase HII-argonaute chimaeric enzymes from Pyrococcus furiosus
-
Kitamura S, Fujishima K, Sato A, Tsuchiya D, Tomita M, Kanai A. 2010. Characterization of RNase HII substrate recognition using RNase HII-argonaute chimaeric enzymes from Pyrococcus furiosus. Biochem J 426: 337-344.
-
(2010)
Biochem J
, vol.426
, pp. 337-344
-
-
Kitamura, S.1
Fujishima, K.2
Sato, A.3
Tsuchiya, D.4
Tomita, M.5
Kanai, A.6
-
29
-
-
57049148002
-
Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs
-
Landthaler M, Gaidatzis D, Rothballer A, Chen PY, Soll SJ, Dinic L, Ojo T, Hafner M, Zavolan M, Tuschl T. 2008. Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs. RNA 14:2580-2596.
-
(2008)
RNA
, vol.14
, pp. 2580-2596
-
-
Landthaler, M.1
Gaidatzis, D.2
Rothballer, A.3
Chen, P.Y.4
Soll, S.J.5
Dinic, L.6
Ojo, T.7
Hafner, M.8
Zavolan, M.9
Tuschl, T.10
-
30
-
-
66149084316
-
qiRNA is a new type of small interfering RNA induced by DNA damage
-
Lee HC, Chang SS, Choudhary S, Aalto AP, Maiti M, Bamford DH, Liu Y. 2009. qiRNA is a new type of small interfering RNA induced by DNA damage. Nature 459:274-277.
-
(2009)
Nature
, vol.459
, pp. 274-277
-
-
Lee, H.C.1
Chang, S.S.2
Choudhary, S.3
Aalto, A.P.4
Maiti, M.5
Bamford, D.H.6
Liu, Y.7
-
31
-
-
77956261159
-
Potential coexistence of both bacterial and eukaryotic small RNA biogenesis and functional related protein homologs in Archaea
-
Li Y, Liu X, Huang L, Guo H, Wang XJ. 2010. Potential coexistence of both bacterial and eukaryotic small RNA biogenesis and functional related protein homologs in Archaea. J Genet Genomics 37:493-503.
-
(2010)
J Genet Genomics
, vol.37
, pp. 493-503
-
-
Li, Y.1
Liu, X.2
Huang, L.3
Guo, H.4
Wang, X.J.5
-
32
-
-
0345359925
-
Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain
-
DOI 10.1038/nature02123
-
Lingel A, Simon B, Izaurralde E, Sattler M. 2003. Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain. Nature 426:465-469. (Pubitemid 37490135)
-
(2003)
Nature
, vol.426
, Issue.6965
, pp. 465-469
-
-
Lingel, A.1
Simon, B.2
Izaurralde, E.3
Sattler, M.4
-
33
-
-
2542461104
-
Nucleic acid 3′-end recognition by the Argonaute2 PAZ domain
-
DOI 10.1038/nsmb777
-
Lingel A, Simon B, Izaurralde E, Sattler M. 2004. Nucleic acid 3′-end recognition by the Argonaute2 PAZ domain. Nat Struct Mol Biol 11:576-577. (Pubitemid 38691927)
-
(2004)
Nature Structural and Molecular Biology
, vol.11
, Issue.6
, pp. 576-577
-
-
Lingel, A.1
Simon, B.2
Izaurralde, E.3
Sattler, M.4
-
34
-
-
33645226840
-
Expression of hiwi gene in human gastric cancer was associated with proliferation of cancer cells
-
Liu X, Sun Y, Guo J, Ma H, Li J, Dong B, Jin G, Zhang J, Wu J, Meng L, Shou C. 2006. Expression of hiwi gene in human gastric cancer was associated with proliferation of cancer cells. Int J Cancer 118:1922-1929.
-
(2006)
Int J Cancer
, vol.118
, pp. 1922-1929
-
-
Liu, X.1
Sun, Y.2
Guo, J.3
Ma, H.4
Li, J.5
Dong, B.6
Jin, G.7
Zhang, J.8
Wu, J.9
Meng, L.10
Shou, C.11
-
35
-
-
15944390620
-
Evolution of translational initiation: New insights from the archaea
-
DOI 10.1016/j.femsre.2004.10.002, Bacterial Genomics
-
Londei P. 2005. Evolution of translational initiation: new insights from the archaea. FEMS Microbiol Rev 29:185-200. (Pubitemid 40432467)
-
(2005)
FEMS Microbiology Reviews
, vol.29
, Issue.2
, pp. 185-200
-
-
Londei, P.1
-
36
-
-
2442679207
-
Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain
-
DOI 10.1038/nature02519
-
Ma JB, Ye K, Patel DJ. 2004. Structural basis for overhang-specific small interfering RNA recognition by the PAZ domain. Nature 429:318-322. (Pubitemid 38684819)
-
(2004)
Nature
, vol.429
, Issue.6989
, pp. 318-322
-
-
Ma, J.-B.1
Ye, K.2
Patel, D.J.3
-
37
-
-
15844371219
-
Structural basis for 5′ -end-specific recognition of guide RNA by the A. fulgidus Piwi protein
-
DOI 10.1038/nature03514
-
Ma JB, Yuan YR, Meister G, Pei Y, Tuschl T, Patel DJ. 2005. Structural basis for 5′-end-specific recognition of guide RNA by the A. fulgidus Piwi protein. Nature 434:666-670. (Pubitemid 40488561)
-
(2005)
Nature
, vol.434
, Issue.7033
, pp. 666-670
-
-
Ma, J.-B.1
Yuan, Y.-R.2
Meister, G.3
Pei, Y.4
Tuschl, T.5
Patel, D.J.6
-
38
-
-
33947153420
-
QIP, a putative exonuclease, interacts with the Neurospora Argonaute protein and facilitates conversion of duplex siRNA into single strands
-
DOI 10.1101/gad.1497607
-
Maiti M, Lee HC, Liu Y. 2007. QIP, a putative exonuclease, interacts with the Neurospora Argonaute protein and facilitates conversion of duplex siRNA into single strands. Genes Dev 21:590-600. (Pubitemid 46409473)
-
(2007)
Genes and Development
, vol.21
, Issue.5
, pp. 590-600
-
-
Maiti, M.1
Lee, H.-C.2
Liu, Y.3
-
39
-
-
70849123800
-
Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements
-
Makarova KS, Wolf YI, van der Oost J, Koonin EV. 2009. Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements. Biol Direct 4: 1-15.
-
(2009)
Biol Direct
, vol.4
, pp. 1-15
-
-
Makarova, K.S.1
Wolf, Y.I.2
Van Der Oost, J.3
Koonin, E.V.4
-
40
-
-
70349673326
-
Redundant and specific roles of the ARGONAUTE proteins AGO1 and ZLL in development and small RNA-directed gene silencing
-
Mallory AC, Hinze A, Tucker MR, Bouche N, Gasciolli V, Elmayan T, Lauressergues D, Jauvion V, Vaucheret H, Laux T. 2009. Redundant and specific roles of the ARGONAUTE proteins AGO1 and ZLL in development and small RNA-directed gene silencing. PLoS Genet 5:e1000646.
-
(2009)
PLoS Genet
, vol.5
-
-
Mallory, A.C.1
Hinze, A.2
Tucker, M.R.3
Bouche, N.4
Gasciolli, V.5
Elmayan, T.6
Lauressergues, D.7
Jauvion, V.8
Vaucheret, H.9
Laux, T.10
-
41
-
-
4644223259
-
Mechanisms of gene silencing by double-stranded RNA
-
DOI 10.1038/nature02873
-
Meister G, Tuschl T. 2004. Mechanisms of gene silencing by double-stranded RNA. Nature 431:343-349. (Pubitemid 39265674)
-
(2004)
Nature
, vol.431
, Issue.7006
, pp. 343-349
-
-
Meister, G.1
Tuschl, T.2
-
42
-
-
38949202953
-
Domain motions of Argonaute, the catalytic engine of RNA interference
-
Ming D, Wall ME, Sanbonmatsu KY. 2007. Domain motions of Argonaute, the catalytic engine of RNA interference. BMC Bioinform 8:470.
-
(2007)
BMC Bioinform
, vol.8
, pp. 470
-
-
Ming, D.1
Wall, M.E.2
Sanbonmatsu, K.Y.3
-
43
-
-
28444437427
-
Slicer function of Drosophila Argonautes and its involvement in RISC formation
-
DOI 10.1101/gad.1370605
-
Miyoshi K, Tsukumo H, Nagami T, Siomi H, Siomi MC. 2005. Slicer function of Drosophila Argonautes and its involvement in RISC formation. Genes Dev 19:2837-2848. (Pubitemid 41739969)
-
(2005)
Genes and Development
, vol.19
, Issue.23
, pp. 2837-2848
-
-
Miyoshi, K.1
Tsukumo, H.2
Nagami, T.3
Siomi, H.4
Siomi, M.C.5
-
44
-
-
41149158475
-
Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 transacting siRNA formation
-
Montgomery TA, Howell MD, Cuperus JT, Li D, Hansen JE, Alexander AL, Chapman EJ, Fahlgren N, Allen E, Carrington JC. 2008. Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 transacting siRNA formation. Cell 133:128-141.
-
(2008)
Cell
, vol.133
, pp. 128-141
-
-
Montgomery, T.A.1
Howell, M.D.2
Cuperus, J.T.3
Li, D.4
Hansen, J.E.5
Alexander, A.L.6
Chapman, E.J.7
Fahlgren, N.8
Allen, E.9
Carrington, J.C.10
-
45
-
-
3142729150
-
Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways
-
DOI 10.1101/gad.1210204
-
Okamura K, Ishizuka A, Siomi H, Siomi MC. 2004. Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways. Genes Dev 18:1655-1666. (Pubitemid 38938183)
-
(2004)
Genes and Development
, vol.18
, Issue.14
, pp. 1655-1666
-
-
Okamura, K.1
Ishizuka, A.2
Siomi, H.3
Siomi, M.C.4
-
46
-
-
78751482329
-
How to slice: Snapshots of Argonaute in action
-
Parker JS. 2010. How to slice: Snapshots of Argonaute in action. Silence 1:3.
-
(2010)
Silence
, vol.1
, pp. 3
-
-
Parker, J.S.1
-
47
-
-
33750435234
-
Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation
-
DOI 10.1038/nature05198, PII NATURE05198
-
Qi Y, He X, Wang XJ, Kohany O, Jurka J, Hannon GJ. 2006. Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation. Nature 443:1008-1012. (Pubitemid 44646179)
-
(2006)
Nature
, vol.443
, Issue.7114
, pp. 1008-1012
-
-
Qi, Y.1
He, X.2
Wang, X.-J.3
Kohany, O.4
Jurka, J.5
Hannon, G.J.6
-
48
-
-
55749088651
-
Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1
-
Qu F, Ye X, Morris TJ. 2008. Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1. Proc Natl Acad Sci USA 105:14732-14737.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 14732-14737
-
-
Qu, F.1
Ye, X.2
Morris, T.J.3
-
49
-
-
78149476037
-
Small RNA-mediated quiescence of transposable elements in animals
-
Saito K, Siomi MC. 2010. Small RNA-mediated quiescence of transposable elements in animals. Dev Cell 19:687-697.
-
(2010)
Dev Cell
, vol.19
, pp. 687-697
-
-
Saito, K.1
Siomi, M.C.2
-
50
-
-
79952901988
-
Production of viable gametes without meiosis in maize deficient for an ARGONAUTE protein
-
Singh M, Goel S, Meeley RB, Dantec C, Parrinello H, Michaud C, Leblanc O, Grimanelli D. 2011. Production of viable gametes without meiosis in maize deficient for an ARGONAUTE protein. Plant Cell 23:443-458.
-
(2011)
Plant Cell
, vol.23
, pp. 443-458
-
-
Singh, M.1
Goel, S.2
Meeley, R.B.3
Dantec, C.4
Parrinello, H.5
Michaud, C.6
Leblanc, O.7
Grimanelli, D.8
-
51
-
-
44349122539
-
Interactions between transposable elements and Argonautes have (probably) been shaping the Drosophila genome throughout evolution
-
DOI 10.1016/j.gde.2008.01.002, PII S0959437X08000063
-
Siomi H, Siomi MC. 2008. Interactions between transposable elements and Argonautes have (probably) been shaping the Drosophila genome throughout evolution. Curr Opin Genet Dev 18:181-187. (Pubitemid 351749819)
-
(2008)
Current Opinion in Genetics and Development
, vol.18
, Issue.2
, pp. 181-187
-
-
Siomi, H.1
Siomi, M.C.2
-
52
-
-
4444302947
-
Crystal structure of argonaute and its implications for RISC slicer activity
-
DOI 10.1126/science.1102514
-
Song JJ, Smith SK, Hannon GJ, Joshua-Tor L. 2004. Crystal structure of Argonaute and its implications for RISC slicer activity. Science 305:1434-1437. (Pubitemid 39167656)
-
(2004)
Science
, vol.305
, Issue.5689
, pp. 1434-1437
-
-
Song, J.-J.1
Smith, S.K.2
Hannon, G.J.3
Joshua-Tor, L.4
-
53
-
-
59649119705
-
RDE-1 slicer activity is required only for passenger-strand cleavage during RNAi in Caenorhabditis elegans
-
Steiner FA, Okihara KL, Hoogstrate SW, Sijen T, Ketting RF. 2009. RDE-1 slicer activity is required only for passenger-strand cleavage during RNAi in Caenorhabditis elegans. Nat Struct Mol Biol 16:207-211.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 207-211
-
-
Steiner, F.A.1
Okihara, K.L.2
Hoogstrate, S.W.3
Sijen, T.4
Ketting, R.F.5
-
54
-
-
0032717319
-
The rde-1 gene, RNA interference, and transposon silencing in C. elegans
-
DOI 10.1016/S0092-8674(00)81644-X
-
Tabara H, Sarkissian M, Kelly WG, Fleenor J, Grishok A, Timmons L, Fire A, Mello CC. 1999. The rde-1 gene, RNA interference, and transposon silencing in C. elegans. Cell 99:123-132. (Pubitemid 29491779)
-
(1999)
Cell
, vol.99
, Issue.2
, pp. 123-132
-
-
Tabara, H.1
Sarkissian, M.2
Kelly, W.G.3
Fleenor, J.4
Grishok, A.5
Timmons, L.6
Fire, A.7
Mello, C.C.8
-
55
-
-
44349094874
-
The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins
-
Takeda A, Iwasaki S, Watanabe T, Utsumi M, Watanabe Y. 2008. The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins. Plant Cell Physiol 49:493-500.
-
(2008)
Plant Cell Physiol
, vol.49
, pp. 493-500
-
-
Takeda, A.1
Iwasaki, S.2
Watanabe, T.3
Utsumi, M.4
Watanabe, Y.5
-
56
-
-
70350238350
-
The biogenesis and function of PIWI proteins and piRNAs: Progress and prospect
-
Thomson T, Lin H. 2009. The biogenesis and function of PIWI proteins and piRNAs: Progress and prospect. Annu Rev Cell Dev Biol 25:355-376.
-
(2009)
Annu Rev Cell Dev Biol
, vol.25
, pp. 355-376
-
-
Thomson, T.1
Lin, H.2
-
57
-
-
79551634514
-
Structural basis for piRNA 2′-O-methylated 3′-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains
-
Tian Y, Simanshu DK, Ma JB, Patel DJ. 2011. Structural basis for piRNA 2′-O-methylated 3′-end recognition by Piwi PAZ (Piwi/Argonaute/ Zwille) domains. Proc Natl Acad Sci USA 108:903-910.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 903-910
-
-
Tian, Y.1
Simanshu, D.K.2
Ma, J.B.3
Patel, D.J.4
-
58
-
-
33845774243
-
Slicer and the Argonautes
-
DOI 10.1038/nchembio848, PII NCHEMBIO848
-
Tolia NH, Joshua-Tor L. 2007. Slicer and the Argonautes. Nat Chem Biol 3:36-43. (Pubitemid 46005696)
-
(2007)
Nature Chemical Biology
, vol.3
, Issue.1
, pp. 36-43
-
-
Tolia, N.H.1
Joshua-Tor, L.2
-
59
-
-
46149088681
-
Plant ARGONAUTES
-
Vaucheret H. 2008. Plant ARGONAUTES. Trends Plant Sci 13:350-358.
-
(2008)
Trends Plant Sci
, vol.13
, pp. 350-358
-
-
Vaucheret, H.1
-
60
-
-
45449118682
-
A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis
-
Wang G, Reinke V. 2008. A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis. Curr Biol 18:861-867.
-
(2008)
Curr Biol
, vol.18
, pp. 861-867
-
-
Wang, G.1
Reinke, V.2
-
61
-
-
57749206034
-
Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex
-
Wang Y, Juranek S, Li H, Sheng G, Tuschl T, Patel DJ. 2008. Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex. Nature 456:921-926.
-
(2008)
Nature
, vol.456
, pp. 921-926
-
-
Wang, Y.1
Juranek, S.2
Li, H.3
Sheng, G.4
Tuschl, T.5
Patel, D.J.6
-
62
-
-
0642345790
-
Structure and conserved RNA binding of the PAZ domain
-
Yan KS, Yan S, Farooq A, Han A, Zeng L, Zhou MM. 2003. Structure and conserved RNA binding of the PAZ domain. Nature 426:468-474.
-
(2003)
Nature
, vol.426
, pp. 468-474
-
-
Yan, K.S.1
Yan, S.2
Farooq, A.3
Han, A.4
Zeng, L.5
Zhou, M.M.6
-
63
-
-
33750824034
-
Analysis of the C. elegans Argonaute Family Reveals that Distinct Argonautes Act Sequentially during RNAi
-
DOI 10.1016/j.cell.2006.09.033, PII S0092867406012931
-
Yigit E, Batista PJ, Bei Y, Pang KM, Chen CC, Tolia NH, Joshua-Tor L, Mitani S, Simard MJ, Mello CC. 2006. Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi. Cell 127:747-757. (Pubitemid 44716250)
-
(2006)
Cell
, vol.127
, Issue.4
, pp. 747-757
-
-
Yigit, E.1
Batista, P.J.2
Bei, Y.3
Pang, K.M.4
Chen, C.-C.G.5
Tolia, N.H.6
Joshua-Tor, L.7
Mitani, S.8
Simard, M.J.9
Mello, C.C.10
-
64
-
-
23144438396
-
Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage
-
DOI 10.1016/j.molcel.2005.07.011, PII S1097276505014759
-
Yuan YR, Pei Y, Ma JB, Kuryavyi V, Zhadina M, Meister G, Chen HY, Dauter Z, Tuschl T, Patel DJ. 2005. Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage. Mol Cell 19:405-419. (Pubitemid 41078780)
-
(2005)
Molecular Cell
, vol.19
, Issue.3
, pp. 405-419
-
-
Yuan, Y.-R.1
Pei, Y.2
Ma, J.-B.3
Kuryavyi, V.4
Zhadina, M.5
Meister, G.6
Chen, H.-Y.7
Dauter, Z.8
Tuschl, T.9
Patel, D.J.10
-
65
-
-
79955739186
-
Structural insights into piRNA recognition by the human PIWI-like 1 PAZ domain
-
Zeng L, Zhang Q, Yan K, Zhou MM. 2011. Structural insights into piRNA recognition by the human PIWI-like 1 PAZ domain. Proteins 79:2004-2009.
-
(2011)
Proteins
, vol.79
, pp. 2004-2009
-
-
Zeng, L.1
Zhang, Q.2
Yan, K.3
Zhou, M.M.4
-
66
-
-
33947586544
-
Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing
-
DOI 10.1038/sj.emboj.7601603, PII 7601603
-
Zheng X, Zhu J, Kapoor A, Zhu JK. 2007. Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing. EMBO J 26:1691-1701. (Pubitemid 46480931)
-
(2007)
EMBO Journal
, vol.26
, Issue.6
, pp. 1691-1701
-
-
Zheng, X.1
Zhu, J.2
Kapoor, A.3
Zhu, J.-K.4
-
67
-
-
76349122201
-
Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans
-
Zisoulis DG, Lovci MT, Wilbert ML, Hutt KR, Liang TY, Pasquinelli AE, Yeo GW. 2010. Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans. Nat Struct Mol Biol 17:173-179.
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 173-179
-
-
Zisoulis, D.G.1
Lovci, M.T.2
Wilbert, M.L.3
Hutt, K.R.4
Liang, T.Y.5
Pasquinelli, A.E.6
Yeo, G.W.7
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