-
1
-
-
48949089963
-
Direct and indirect roles of viral suppressors of RNA silencing in pathogenesis
-
Diaz-Pendon JA, Ding SW(2008) Direct and indirect roles of viral suppressors of RNA silencing in pathogenesis. Annu Rev Phytopathol 46: 303-326.
-
(2008)
Annu Rev Phytopathol
, vol.46
, pp. 303-326
-
-
Diaz-Pendon, J.A.1
Ding, S.W.2
-
2
-
-
4644242349
-
RNA silencing in plants
-
Baulcombe D (2004) RNA silencing in plants. Nature 431: 356-363.
-
(2004)
Nature
, vol.431
, pp. 356-363
-
-
Baulcombe, D.1
-
3
-
-
33845628177
-
Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing
-
Blevins T, Rajeswaran R, Shivaprasad PV, Beknazariants D, Si-Ammour A, et al. (2006) Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing. Nucleic Acids Res 34: 6233-6246.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 6233-6246
-
-
Blevins, T.1
Rajeswaran, R.2
Shivaprasad, P.V.3
Beknazariants, D.4
Si-Ammour, A.5
-
4
-
-
33745916446
-
Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense
-
Deleris A, Gallego-Bartolome J, Bao J, Kasschau KD, Carrington JC, et al. (2006) Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense. Science 313: 68-71.
-
(2006)
Science
, vol.313
, pp. 68-71
-
-
Deleris, A.1
Gallego-Bartolome, J.2
Bao, J.3
Kasschau, K.D.4
Carrington, J.C.5
-
5
-
-
28444464041
-
DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal
-
Dunoyer P, Himber C, Voinnet O (2005) DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal. Nat Genet 37: 1356-1360.
-
(2005)
Nat Genet
, vol.37
, pp. 1356-1360
-
-
Dunoyer, P.1
Himber, C.2
Voinnet, O.3
-
6
-
-
33750513190
-
RNA interference-inducing hairpin RNAs in plants act through the viral defence pathway
-
Fusaro AF, Matthew L, Smith NA, Curtin SJ, Dedic-Hagan J, et al. (2006) RNA interference-inducing hairpin RNAs in plants act through the viral defence pathway. EMBO Rep 7: 1168-1175.
-
(2006)
EMBO Rep
, vol.7
, pp. 1168-1175
-
-
Fusaro, A.F.1
Matthew, L.2
Smith, N.A.3
Curtin, S.J.4
Dedic-Hagan, J.5
-
7
-
-
33845391778
-
Cucumber mosaic virus-encoded 2b suppressor inhibits Arabidopsis Argonaute1 cleavage activity to counter plant defense
-
Zhang X, Yuan YR, Pei Y, Lin SS, Tuschl T, et al. (2006) Cucumber mosaic virus-encoded 2b suppressor inhibits Arabidopsis Argonaute1 cleavage activity to counter plant defense. Genes Dev 20: 3255-3268.
-
(2006)
Genes Dev
, vol.20
, pp. 3255-3268
-
-
Zhang, X.1
Yuan, Y.R.2
Pei, Y.3
Lin, S.S.4
Tuschl, T.5
-
8
-
-
44349094874
-
The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins
-
Takeda A, Iwasaki S, Watanabe T, Utsumi M, Watanabe Y (2008) The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins. Plant Cell Physiol 49: 493-500.
-
(2008)
Plant Cell Physiol
, vol.49
, pp. 493-500
-
-
Takeda, A.1
Iwasaki, S.2
Watanabe, T.3
Utsumi, M.4
Watanabe, Y.5
-
9
-
-
77953200551
-
Disruption of two defensive signaling pathways by a viral RNA silencing suppressor
-
Lewsey MG, Murphy AM, MacLean D, Dalchau N, Westwood JH, et al. (2010) Disruption of two defensive signaling pathways by a viral RNA silencing suppressor. Mol Plant Microbe Interact 23: 835-845.
-
(2010)
Mol Plant Microbe Interact
, vol.23
, pp. 835-845
-
-
Lewsey, M.G.1
Murphy, A.M.2
McLean, D.3
Dalchau, N.4
Westwood, J.H.5
-
10
-
-
77649218206
-
Two plant viral suppressors of silencing require the ethylene-inducible host transcription factor RAV2 to block RNA silencing
-
Endres MW, Gregory BD, Gao Z, Foreman AW, Mlotshwa S, et al. (2010) Two plant viral suppressors of silencing require the ethylene-inducible host transcription factor RAV2 to block RNA silencing. PLoS Pathog 6: e1000729.
-
(2010)
PLoS Pathog
, vol.6
-
-
Endres, M.W.1
Gregory, B.D.2
Gao, Z.3
Foreman, A.W.4
Mlotshwa, S.5
-
11
-
-
55749088651
-
Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1
-
Qu F, Ye X, Morris TJ (2008) Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1. Proc Natl Acad Sci U S A 105: 14732-14737.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 14732-14737
-
-
Qu, F.1
Ye, X.2
Morris, T.J.3
-
12
-
-
0036009918
-
Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance
-
Morel JB, Godon C, Mourrain P, Beclin C, Boutet S, et al. (2002) Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance. Plant Cell 14: 629-639.
-
(2002)
Plant Cell
, vol.14
, pp. 629-639
-
-
Morel, J.B.1
Godon, C.2
Mourrain, P.3
Beclin, C.4
Boutet, S.5
-
13
-
-
0037295079
-
Turnip crinkle virus coat protein mediates suppression of RNA silencing in Nicotiana benthamiana
-
Thomas CL, Leh V, Lederer C, Maule AJ (2003) Turnip crinkle virus coat protein mediates suppression of RNA silencing in Nicotiana benthamiana. Virology 306: 33-41.
-
(2003)
Virology
, vol.306
, pp. 33-41
-
-
Thomas, C.L.1
Leh, V.2
Lederer, C.3
Maule, A.J.4
-
14
-
-
0026542276
-
Turnip crinkle virus genes required for RNA replication and virus movement
-
Hacker DL, Petty IT, Wei N, Morris TJ (1992) Turnip crinkle virus genes required for RNA replication and virus movement. Virology 186: 1-8.
-
(1992)
Virology
, vol.186
, pp. 1-8
-
-
Hacker, D.L.1
Petty, I.T.2
Wei, N.3
Morris, T.J.4
-
15
-
-
17444430392
-
microRNA-directed phasing during trans-acting siRNA biogenesis in plants
-
Allen E, Xie Z, Gustafson AM, Carrington JC (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121: 207-221.
-
(2005)
Cell
, vol.121
, pp. 207-221
-
-
Allen, E.1
Xie, Z.2
Gustafson, A.M.3
Carrington, J.C.4
-
16
-
-
33749254470
-
SERRATE: A new player on the plant microRNA scene
-
Lobbes D, Rallapalli G, Schmidt DD, Martin C, Clarke J (2006) SERRATE: a new player on the plant microRNA scene. EMBO Rep 7: 1052-1058.
-
(2006)
EMBO Rep
, vol.7
, pp. 1052-1058
-
-
Lobbes, D.1
Rallapalli, G.2
Schmidt, D.D.3
Martin, C.4
Clarke, J.5
-
17
-
-
77951862235
-
Argonaute quenching and global changes in Dicer homeostasis caused by a pathogenencoded GW repeat protein
-
Azevedo J, Garcia D, Pontier D, Ohnesorge S, Yu A, et al. (2010) Argonaute quenching and global changes in Dicer homeostasis caused by a pathogenencoded GW repeat protein. Genes Dev 24: 904-915.
-
(2010)
Genes Dev
, vol.24
, pp. 904-915
-
-
Azevedo, J.1
Garcia, D.2
Pontier, D.3
Ohnesorge, S.4
Yu, A.5
-
18
-
-
35448978798
-
The p122 subunit of Tobacco mosaic virus replicase is a potent silencing suppressor and compromises both small interfering RNA- and MicroRNA-mediated pathways
-
Csorba T, Bovi A, Dalmay T, Burgyan J (2007) The p122 subunit of Tobacco mosaic virus replicase is a potent silencing suppressor and compromises both small interfering RNA- and MicroRNA-mediated pathways. Journal of Virology 81: 11768-11780.
-
(2007)
Journal of Virology
, vol.81
, pp. 11768-11780
-
-
Csorba, T.1
Bovi, A.2
Dalmay, T.3
Burgyan, J.4
-
19
-
-
34548474870
-
The Polerovirus Silencing Suppressor P0 Targets ARGONAUTE Proteins for Degradation
-
Baumberger N, Tsai CH, Lie M, Havecker E, Ziegler-Graff V, et al. (2007) The Polerovirus Silencing Suppressor P0 Targets ARGONAUTE Proteins for Degradation. Current Biology 17: 1609-1614.
-
(2007)
Current Biology
, vol.17
, pp. 1609-1614
-
-
Baumberger, N.1
Tsai, C.H.2
Lie, M.3
Havecker, E.4
Ziegler-Graff, V.5
-
21
-
-
77955255337
-
The silencing suppressor P25 of Potato virus X interacts with Argonaute1 and mediates its degradation through the proteasome pathway
-
Chiu MH, Chen IH, Baulcombe DC, Tsai CH (2010) The silencing suppressor P25 of Potato virus X interacts with Argonaute1 and mediates its degradation through the proteasome pathway. Molecular Plant Pathology 11: 641-649.
-
(2010)
Molecular Plant Pathology
, vol.11
, pp. 641-649
-
-
Chiu, M.H.1
Chen, I.H.2
Baulcombe, D.C.3
Tsai, C.H.4
-
22
-
-
26944466621
-
An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal
-
Schwach F, Vaistij FE, Jones L, Baulcombe DC (2005) An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal. Plant Physiol 138: 1842-1852.
-
(2005)
Plant Physiol
, vol.138
, pp. 1842-1852
-
-
Schwach, F.1
Vaistij, F.E.2
Jones, L.3
Baulcombe, D.C.4
-
23
-
-
77950342461
-
The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci
-
Havecker ER, Wallbridge LM, Hardcastle TJ, Bush MS, Kelly KA, et al. (2010) The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci. Plant Cell 22: 321-334.
-
(2010)
Plant Cell
, vol.22
, pp. 321-334
-
-
Havecker, E.R.1
Wallbridge, L.M.2
Hardcastle, T.J.3
Bush, M.S.4
Kelly, K.A.5
-
24
-
-
33947586544
-
Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing
-
Zheng X, Zhu J, Kapoor A, Zhu JK (2007) Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing. EMBO J 26: 1691-1701.
-
(2007)
EMBO J
, vol.26
, pp. 1691-1701
-
-
Zheng, X.1
Zhu, J.2
Kapoor, A.3
Zhu, J.K.4
-
25
-
-
4944225347
-
Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs
-
Vazquez F, Vaucheret H, Rajagopalan R, Lepers C, Gasciolli V, et al. (2004) Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs. Mol Cell 16: 69-79.
-
(2004)
Mol Cell
, vol.16
, pp. 69-79
-
-
Vazquez, F.1
Vaucheret, H.2
Rajagopalan, R.3
Lepers, C.4
Gasciolli, V.5
-
26
-
-
36849089086
-
A novel class of bacteria-induced small RNAs in Arabidopsis
-
Katiyar-Agarwal S, Gao S, Vivian-Smith A, Jin H (2007) A novel class of bacteria-induced small RNAs in Arabidopsis. Genes Dev 21: 3123-3134.
-
(2007)
Genes Dev
, vol.21
, pp. 3123-3134
-
-
Katiyar-Agarwal, S.1
Gao, S.2
Vivian-Smith, A.3
Jin, H.4
-
27
-
-
0029154666
-
Effect of mutations in the PINHEAD gene of Arabidopsis on the formation of the shoot apical meristem
-
McConnell JR, Barton MK (1995) Effect of mutations in the PINHEAD gene of Arabidopsis on the formation of the shoot apical meristem. Developmental Genetics 16: 358-366.
-
(1995)
Developmental Genetics
, vol.16
, pp. 358-366
-
-
McConnell, J.R.1
Barton, M.K.2
-
28
-
-
70849093003
-
Effects of DICER-like proteins 2, 3 and 4 on cucumber mosaic virus and tobacco mosaic virus infections in salicylic acidtreated plants
-
Lewsey MG, Carr JP (2009) Effects of DICER-like proteins 2, 3 and 4 on cucumber mosaic virus and tobacco mosaic virus infections in salicylic acidtreated plants. J Gen Virol 90: 3010-3014.
-
(2009)
J Gen Virol
, vol.90
, pp. 3010-3014
-
-
Lewsey, M.G.1
Carr, J.P.2
-
29
-
-
0030939692
-
Salicylic acid interferes with tobacco mosaic virus replication via a novel salicylhydroxamic acid-sensitive mechanism
-
Chivasa S, Murphy AM, Naylor M, Carr JP (1997) Salicylic acid interferes with tobacco mosaic virus replication via a novel salicylhydroxamic acid-sensitive mechanism. Plant Cell 9: 547-557.
-
(1997)
Plant Cell
, vol.9
, pp. 547-557
-
-
Chivasa, S.1
Murphy, A.M.2
Naylor, M.3
Carr, J.P.4
-
31
-
-
0028951086
-
Involvement of a stem-loop structure in the location of junction sites in viral RNA recombination
-
Carpenter CD, Oh JW, Zhang C, Simon AE (1995) Involvement of a stem-loop structure in the location of junction sites in viral RNA recombination. J Mol Biol 245: 608-622.
-
(1995)
J Mol Biol
, vol.245
, pp. 608-622
-
-
Carpenter, C.D.1
Oh, J.W.2
Zhang, C.3
Simon, A.E.4
-
33
-
-
67650461957
-
Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis
-
Mosher RA, Melnyk CW, Kelly KA, Dunn RM, Studholme DJ, et al. (2009) Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis. Nature 460: 283-U151.
-
(2009)
Nature
, vol.460
-
-
Mosher, R.A.1
Melnyk, C.W.2
Kelly, K.A.3
Dunn, R.M.4
Studholme, D.J.5
-
36
-
-
64549150047
-
Amplification efficiency: Linking baseline and bias in the analysis of quantitative PCR data
-
Ruijter JM, Ramakers C, Hoogaars WMH, Karlen Y, Bakker O, et al. (2009) Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data. Nucleic Acids Research 37: 12.
-
(2009)
Nucleic Acids Research
, vol.37
, pp. 12
-
-
Ruijter, J.M.1
Ramakers, C.2
Hoogaars, W.M.H.3
Karlen, Y.4
Bakker, O.5
-
37
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(T)(2Delta Delta C) method
-
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(T)(2Delta Delta C) method. Methods 25: 402-408.
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
38
-
-
38849108075
-
Statistical methods for efficiency adjusted real-time PCR quantification
-
Yuan JS, Wang D, Stewart CN, Jr. (2008) Statistical methods for efficiency adjusted real-time PCR quantification. Biotechnology Journal 3: 112-123.
-
(2008)
Biotechnology Journal
, vol.3
, pp. 112-123
-
-
Yuan, J.S.1
Wang, D.2
Stewart Jr., C.N.3
|