메뉴 건너뛰기




Volumn 79, Issue 6, 2011, Pages 2004-2009

Structural insights into piRNA recognition by the human PIWI-like 1 PAZ domain

Author keywords

PAZ; PiRNA; PIWI; SsRNA

Indexed keywords

PIWI INTERACTING RNA; PIWI LIKE 1 PROTEIN; PIWI PROTEIN; UNCLASSIFIED DRUG;

EID: 79955739186     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.23003     Document Type: Article
Times cited : (17)

References (36)
  • 1
    • 43549096196 scopus 로고    scopus 로고
    • The Argonaute protein family
    • Hock J, Meister G. The Argonaute protein family. Genome Biol 2008; 9: 210.
    • (2008) Genome Biol , vol.9 , pp. 210
    • Hock, J.1    Meister, G.2
  • 2
    • 22144489833 scopus 로고    scopus 로고
    • The nuts and bolts of the RISC machine
    • Filipowicz W. The nuts and bolts of the RISC machine. Cell 2005; 122: 17-20.
    • (2005) Cell , vol.122 , pp. 17-20
    • Filipowicz, W.1
  • 3
    • 37549014207 scopus 로고    scopus 로고
    • Argonaute proteins: key players in RNA silencing
    • Hutvagner G, Simard, MJ. Argonaute proteins: key players in RNA silencing. Nature Rev Mol Cell Biol 2008; 9: 22-32.
    • (2008) Nature Rev Mol Cell Biol , vol.9 , pp. 22-32
    • Hutvagner, G.1    Simard, M.J.2
  • 5
    • 0032443562 scopus 로고    scopus 로고
    • A novel of evolutionary conserved genes defined by piwi are essential for stem cell self-renewal
    • Cox DN, Chao A, Baker J, Chang L, Qiao D, Lin H. A novel of evolutionary conserved genes defined by piwi are essential for stem cell self-renewal. Genes Dev 1998; 12: 3715-3727.
    • (1998) Genes Dev , vol.12 , pp. 3715-3727
    • Cox, D.N.1    Chao, A.2    Baker, J.3    Chang, L.4    Qiao, D.5    Lin, H.6
  • 6
    • 0033966406 scopus 로고    scopus 로고
    • Piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline setm cells
    • Cox DN, Chao A, Lin H. Piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline setm cells. Development 2000; 127: 503-514.
    • (2000) Development , vol.127 , pp. 503-514
    • Cox, D.N.1    Chao, A.2    Lin, H.3
  • 8
    • 33745336617 scopus 로고    scopus 로고
    • A germline-specific class of small RNAs binds mammalian Piwi proteins
    • Girard A, Sachidanandam R, Hannon GJ, Carmell MA. A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature 2006; 442: 199-202.
    • (2006) Nature , vol.442 , pp. 199-202
    • Girard, A.1    Sachidanandam, R.2    Hannon, G.J.3    Carmell, M.A.4
  • 9
    • 33745621037 scopus 로고    scopus 로고
    • A novel class of small RNAs in mouse spermatogenic cells
    • Grivna ST, Beyret E, Wang Z, Lin H. A novel class of small RNAs in mouse spermatogenic cells. Genes Dev 2006; 20: 1709-1714.
    • (2006) Genes Dev , vol.20 , pp. 1709-1714
    • Grivna, S.T.1    Beyret, E.2    Wang, Z.3    Lin, H.4
  • 11
    • 33745599586 scopus 로고    scopus 로고
    • Idetification and characterization of two novel classes of small RNAs in the mouse germline: restrotransposon-derived siRNAs in oocytes and germline small RNAs in testes
    • Watanabe T, Takeda A, Tsukiyama T, Mise K, Okuno T, Sasaki H, Minami N, Imani H. Idetification and characterization of two novel classes of small RNAs in the mouse germline: restrotransposon-derived siRNAs in oocytes and germline small RNAs in testes. Genes Dev 2006; 20: 1732-1743.
    • (2006) Genes Dev , vol.20 , pp. 1732-1743
    • Watanabe, T.1    Takeda, A.2    Tsukiyama, T.3    Mise, K.4    Okuno, T.5    Sasaki, H.6    Minami, N.7    Imani, H.8
  • 12
    • 0642345790 scopus 로고    scopus 로고
    • Structure and conserved RNA binding of the Paz domain
    • Yan KS, Yan S, Farooq A, Han A, Zeng L, Zhou MM. Structure and conserved RNA binding of the Paz domain. Nature 2003; 426: 468-474.
    • (2003) Nature , vol.426 , pp. 468-474
    • Yan, K.S.1    Yan, S.2    Farooq, A.3    Han, A.4    Zeng, L.5    Zhou, M.M.6
  • 13
    • 0345359925 scopus 로고    scopus 로고
    • Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain
    • Lingel A, Simon B, Izaurralde E, Sattler M. Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain. Nature 2004; 426: 465-469.
    • (2004) Nature , vol.426 , pp. 465-469
    • Lingel, A.1    Simon, B.2    Izaurralde, E.3    Sattler, M.4
  • 14
    • 2442679207 scopus 로고    scopus 로고
    • Structural Basis for over-hang-specific small interfering RNA recognition by the Paz domain
    • Ma JB, Ye K, Patel DJ. Structural Basis for over-hang-specific small interfering RNA recognition by the Paz domain. Nature 2004; 429: 318-322.
    • (2004) Nature , vol.429 , pp. 318-322
    • Ma, J.B.1    Ye, K.2    Patel, D.J.3
  • 16
    • 4444302947 scopus 로고    scopus 로고
    • Crystal structure of Argonaute and its implications for RISC slicer activity
    • Song JJ, Smith SK, Hannon GJ, Jishua-Tor L. Crystal structure of Argonaute and its implications for RISC slicer activity. Science 2004; 305: 1434-1437.
    • (2004) Science , vol.305 , pp. 1434-1437
    • Song, J.J.1    Smith, S.K.2    Hannon, G.J.3    Jishua-Tor, L.4
  • 18
    • 34249810892 scopus 로고    scopus 로고
    • Argonaute proteins: mediators of RNA silencing
    • Peters L, Meister G. Argonaute proteins: mediators of RNA silencing. Mol Cell 2007; 26: 611-623.
    • (2007) Mol Cell , vol.26 , pp. 611-623
    • Peters, L.1    Meister, G.2
  • 19
    • 34249805994 scopus 로고    scopus 로고
    • The coming age for Piwi proteins
    • Seto AG, Kingston RE, Lau NC. The coming age for Piwi proteins. Mol Cell 2007; 26: 603-609.
    • (2007) Mol Cell , vol.26 , pp. 603-609
    • Seto, A.G.1    Kingston, R.E.2    Lau, N.C.3
  • 20
    • 34247525481 scopus 로고    scopus 로고
    • piRNAs in the germ line
    • Lin H. piRNAs in the germ line. Science 2007; 316: 397.
    • (2007) Science , vol.316 , pp. 397
    • Lin, H.1
  • 21
    • 33947731008 scopus 로고    scopus 로고
    • Mighty Piwis defend the germline against genome intruders
    • O'Donnell KA, Boeke JD. Mighty Piwis defend the germline against genome intruders. Cell 2007; 129: 37-44.
    • (2007) Cell , vol.129 , pp. 37-44
    • O'Donnell, K.A.1    Boeke, J.D.2
  • 22
    • 70350238350 scopus 로고    scopus 로고
    • The biogenesis and function PIWI proteins and piRNAs: progress and prospect
    • Thomson T, Lin H. The biogenesis and function PIWI proteins and piRNAs: progress and prospect. Annu Rev Cell Dev Biol3009; 25: 355-376.
    • Annu Rev Cell Dev Biol3009 , vol.25 , pp. 355-376
    • Thomson, T.1    Lin, H.2
  • 23
    • 33947390781 scopus 로고    scopus 로고
    • A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila
    • Gunawardane LS, Saito K, Nishida KM, Miyoshi K, Kawamura Y, et al. A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila. Science 2007; 315: 1587-1590.
    • (2007) Science , vol.315 , pp. 1587-1590
    • Gunawardane, L.S.1    Saito, K.2    Nishida, K.M.3    Miyoshi, K.4    Kawamura, Y.5
  • 25
    • 33746502166 scopus 로고    scopus 로고
    • Adistinct small RNA pathway silences selfish genetic elements in the germline
    • Vagin VV, Sigova A, Li C, Seitz H, Gvozdev V, Zamore PD. Adistinct small RNA pathway silences selfish genetic elements in the germline. Science 2006; 313; 320-324.
    • (2006) Science , vol.313 , pp. 320-324
    • Vagin, V.V.1    Sigova, A.2    Li, C.3    Seitz, H.4    Gvozdev, V.5    Zamore, P.D.6
  • 26
    • 58749096360 scopus 로고    scopus 로고
    • On the road to reading the RNA-interference code
    • Siomi H, Siomi MC. On the road to reading the RNA-interference code. Nature 2009; 457: 396-404.
    • (2009) Nature , vol.457 , pp. 396-404
    • Siomi, H.1    Siomi, M.C.2
  • 29
    • 0028022578 scopus 로고
    • A pulse filed gradient isotope-filtered 3D 13C-HMQC-NOESY experiment for extracting intermolecular NOE contacts in moldecular complexes
    • Lee W, Revington MJ, Arrowsmith C, Kay LE. A pulse filed gradient isotope-filtered 3D 13C-HMQC-NOESY experiment for extracting intermolecular NOE contacts in moldecular complexes. FEBS Lett 1994; 350: 87-90.
    • (1994) FEBS Lett , vol.350 , pp. 87-90
    • Lee, W.1    Revington, M.J.2    Arrowsmith, C.3    Kay, L.E.4
  • 32
    • 0033003335 scopus 로고    scopus 로고
    • Protein backbone angle restraints from searching a database for chemical shift and sequence homology
    • Cornilescu G, Delaglio F, Bax A. Protein backbone angle restraints from searching a database for chemical shift and sequence homology. J Biomol NMR 1999; 13: 289-302.
    • (1999) J Biomol NMR , vol.13 , pp. 289-302
    • Cornilescu, G.1    Delaglio, F.2    Bax, A.3
  • 34
    • 33847283016 scopus 로고    scopus 로고
    • ARIA2: automated NOE assignment and data integration in NMR structure calculation
    • Rieping W, et al. ARIA2: automated NOE assignment and data integration in NMR structure calculation. Bioinformatics 2007; 23: 381-382.
    • (2007) Bioinformatics , vol.23 , pp. 381-382
    • Rieping, W.1
  • 35
    • 3543012707 scopus 로고    scopus 로고
    • Crystallography and NMR system: a new software suite for macromolecular structure determination
    • Brunger AT et al. Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 1998; 54: 905-992.
    • (1998) Acta Crystallogr D Biol Crystallogr , vol.54 , pp. 905-992
    • Brunger, A.T.1
  • 36
    • 0030339738 scopus 로고    scopus 로고
    • AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR
    • Laskowski RA, et al. AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR. J Biomol NMR 1996; 8: 477-486
    • (1996) J Biomol NMR , vol.8 , pp. 477-486
    • Laskowski, R.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.