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Volumn 2, Issue 6, 2011, Pages 486-496

Recent advances in understanding the role of nutrition in human genome evolution

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTATION; DIET; EVOLUTION; FOOD; GENETIC SELECTION; GENETICS; GENOMICS; HUMAN; HUMAN GENOME; METHODOLOGY; NUTRITIONAL STATUS; REVIEW;

EID: 84862297364     PISSN: 21618313     EISSN: 21565376     Source Type: Journal    
DOI: 10.3945/an.111.001024     Document Type: Article
Times cited : (32)

References (94)
  • 2
    • 77955608813 scopus 로고    scopus 로고
    • Evolutionary adaptations to dietary changes
    • Luca F, Perry GH, Di Rienzo A. Evolutionary adaptations to dietary changes. Annu Rev Nutr. 2010; 30: 291-314.
    • (2010) Annu Rev Nutr. , vol.30 , pp. 291-314
    • Luca, F.1    Perry, G.H.2    Di Rienzo, A.3
  • 4
    • 52949145597 scopus 로고    scopus 로고
    • Positive selection in the human genome: from genome scans to biological significance
    • Kelley JL, Swanson WJ. Positive selection in the human genome: from genome scans to biological significance. Annu Rev Genomics Hum Genet. 2008; 9: 143-60.
    • (2008) Annu Rev Genomics Hum Genet. , vol.9 , pp. 143-160
    • Kelley, J.L.1    Swanson, W.J.2
  • 5
    • 84859872058 scopus 로고    scopus 로고
    • Molecular adaptation of modern human populations
    • Shi H, Su B. Molecular adaptation of modern human populations. Int J Evol Biol. 2011;484769.
    • (2011) Int J Evol Biol. , pp. 484769
    • Shi, H.1    Su, B.2
  • 6
    • 65149103048 scopus 로고    scopus 로고
    • Constructing genomic maps of positive selection in humans: where do we go from here
    • Akey JM. Constructing genomic maps of positive selection in humans: where do we go from here? Genome Res. 2009; 19: 711-22.
    • (2009) Genome Res. , vol.19 , pp. 711-722
    • Akey, J.M.1
  • 7
    • 29444452921 scopus 로고    scopus 로고
    • Molecular signatures of natural selection
    • Nielsen R. Molecular signatures of natural selection. Annu Rev Genet. 2005; 39: 197-218.
    • (2005) Annu Rev Genet. , vol.39 , pp. 197-218
    • Nielsen, R.1
  • 10
    • 0035130163 scopus 로고    scopus 로고
    • Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees
    • Chen FC, Li WH. Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees. Am J Hum Genet. 2001; 68: 444-56.
    • (2001) Am J Hum Genet. , vol.68 , pp. 444-456
    • Chen, F.C.1    Li, W.H.2
  • 12
    • 33646756216 scopus 로고    scopus 로고
    • Plio-Pleistocene climatic change in the Turkana Basin (East Africa): evidence from large mammal faunas
    • Hernández Fernández M, Vrba ES. Plio-Pleistocene climatic change in the Turkana Basin (East Africa): evidence from large mammal faunas. J Hum Evol. 2006;50:595-626
    • (2006) J Hum Evol. , vol.50 , pp. 595-626
    • Hernández Fernández, M.1    Vrba, E.S.2
  • 14
    • 79955111209 scopus 로고    scopus 로고
    • On the earliest evidence for habitual use of fire in Europe
    • Roebroeks W, Villa P. On the earliest evidence for habitual use of fire in Europe. Proc Natl Acad Sci USA. 2011; 108: 5209-14.
    • (2011) Proc Natl Acad Sci USA. , vol.108 , pp. 5209-5214
    • Roebroeks, W.1    Villa, P.2
  • 15
    • 0242407665 scopus 로고    scopus 로고
    • The critical role played by animal source foods in human (Homo) evolution
    • Milton K. The critical role played by animal source foods in human (Homo) evolution. J Nutr. 2003;133:S3886-92.
    • (2003) J Nutr. , vol.133
    • Milton, K.1
  • 17
    • 33746493901 scopus 로고    scopus 로고
    • A geographically explicit genetic model of worldwide human-settlement history
    • Liu H, Prugnolle F, Manica A, Balloux F. A geographically explicit genetic model of worldwide human-settlement history. Am J Hum Genet. 2006; 79: 230-7.
    • (2006) Am J Hum Genet. , vol.79 , pp. 230-237
    • Liu, H.1    Prugnolle, F.2    Manica, A.3    Balloux, F.4
  • 18
    • 0037043719 scopus 로고    scopus 로고
    • Evolution, consequences and future of plant and animal domestication
    • Diamond J. Evolution, consequences and future of plant and animal domestication. Nature. 2002; 418: 700-7.
    • (2002) Nature. , vol.418 , pp. 700-707
    • Diamond, J.1
  • 19
    • 0142185060 scopus 로고    scopus 로고
    • Human nutrition and food research: opportunities and challenges in the post-genomic era
    • Fairweather-Tait SJ. Human nutrition and food research: opportunities and challenges in the post-genomic era. Philos Trans R Soc Lond B Biol Sci. 2003; 358: 1709-27.
    • (2003) Philos Trans R Soc Lond B Biol Sci. , vol.358 , pp. 1709-1727
    • Fairweather-Tait, S.J.1
  • 20
    • 70349566593 scopus 로고
    • Diabetes mellitus: a "thrifty" genotype rendered detrimental by "progress"
    • Neel JV. Diabetes mellitus: a "thrifty" genotype rendered detrimental by "progress"? Am J Hum Genet. 1962; 14: 353-62.
    • (1962) Am J Hum Genet. , vol.14 , pp. 353-362
    • Neel, J.V.1
  • 21
    • 0028090554 scopus 로고
    • The carnivore connection: dietary carbohydrate in the evolution of NIDDM
    • Miller JC, Colagiuri S. The carnivore connection: dietary carbohydrate in the evolution of NIDDM. Diabetologia. 1994; 37: 1280-6.
    • (1994) Diabetologia. , vol.37 , pp. 1280-1286
    • Miller, J.C.1    Colagiuri, S.2
  • 22
    • 0036228790 scopus 로고    scopus 로고
    • The'carnivore connection': evolutionary aspects of insulin resistance
    • Colagiuri S, Brand MJ. The'carnivore connection': evolutionary aspects of insulin resistance. Eur J Clin Nutr. 2002;56 SUPPL 1:S30-5.
    • (2002) Eur J Clin Nutr. , vol.56 , Issue.SUPPL. 1
    • Colagiuri, S.1    Brand, M.J.2
  • 23
    • 77950456427 scopus 로고    scopus 로고
    • Multiple personal genomes await
    • Venter JC. Multiple personal genomes await. Nature. 2010;464:676-7.
    • (2010) Nature. , vol.464 , pp. 676-677
    • Venter, J.C.1
  • 24
    • 84975742565 scopus 로고    scopus 로고
    • A map of human genome variation from population-scale sequencing
    • 1000 Genomes Project Consortium
    • 1000 Genomes Project Consortium. A map of human genome variation from population-scale sequencing. Nature. 2010; 467: 1061-73.
    • (2010) Nature. , vol.467 , pp. 1061-1073
  • 26
    • 43049146524 scopus 로고    scopus 로고
    • HapMap harvest of insights into the genetics of common disease
    • Manolio TA, Brooks LD, Collins FSA. HapMap harvest of insights into the genetics of common disease. J Clin Invest. 2008; 118: 1590-605.
    • (2008) J Clin Invest. , vol.118 , pp. 1590-1605
    • Manolio, T.A.1    Brooks, L.D.2    Collins, F.S.A.3
  • 31
    • 0242524432 scopus 로고    scopus 로고
    • Patterns of human genetic diversity: implications for human evolutionary history and disease
    • TishkoffSA, Verrelli BC. Patterns of human genetic diversity: implications for human evolutionary history and disease. Annu Rev Genomics Hum Genet. 2003; 4: 293-340.
    • (2003) Annu Rev Genomics Hum Genet. , vol.4 , pp. 293-340
    • Tishkoff, S.A.1    Verrelli, B.C.2
  • 32
    • 77950380215 scopus 로고    scopus 로고
    • Human population differentiation is strongly correlated with local recombination rate
    • Keinan A, Reich D. Human population differentiation is strongly correlated with local recombination rate. PLoS Genet. 2010;6:e1000886.
    • (2010) PLoS Genet. , vol.6
    • Keinan, A.1    Reich, D.2
  • 33
    • 0036640951 scopus 로고    scopus 로고
    • Human SNP variability and mutation rate are higher in regions of high recombination
    • Lercher MJ, Hurst LD. Human SNP variability and mutation rate are higher in regions of high recombination. Trends Genet. 2002; 18: 337-40.
    • (2002) Trends Genet. , vol.18 , pp. 337-340
    • Lercher, M.J.1    Hurst, L.D.2
  • 36
    • 76749097550 scopus 로고    scopus 로고
    • The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation
    • Pritchard JK, Pickrell JK, Coop G. The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation. Curr Biol. 2010;20: R208-15.
    • (2010) Curr Biol. , vol.20
    • Pritchard, J.K.1    Pickrell, J.K.2    Coop, G.3
  • 41
    • 34548346860 scopus 로고    scopus 로고
    • Promoter regions of many neural-and nutrition-related genes have experienced positive selection during human evolution
    • Haygood R, Fedrigo O, Hanson B, Yokoyama KD, Wray GA. Promoter regions of many neural-and nutrition-related genes have experienced positive selection during human evolution. Nat Genet. 2007; 39: 1140-4.
    • (2007) Nat Genet. , vol.39 , pp. 1140-1144
    • Haygood, R.1    Fedrigo, O.2    Hanson, B.3    Yokoyama, K.D.4    Wray, G.A.5
  • 42
    • 0023339852 scopus 로고
    • A test of neutral molecular evolution based on nucleotide data
    • Hudson RR, Kreitman M, Aguade M. A test of neutral molecular evolution based on nucleotide data. Genetics. 1987; 116: 153-9.
    • (1987) Genetics. , vol.116 , pp. 153-159
    • Hudson, R.R.1    Kreitman, M.2    Aguade, M.3
  • 43
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald JH, Kreitman M. Adaptive protein evolution at the Adh locus in Drosophila. Nature. 1991; 351: 652-4.
    • (1991) Nature. , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 46
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics. 1989; 123: 585-95.
    • (1989) Genetics. , vol.123 , pp. 585-595
    • Tajima, F.1
  • 47
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu YX, Li WH. Statistical tests of neutrality of mutations. Genetics. 1993; 133: 693-709.
    • (1993) Genetics. , vol.133 , pp. 693-709
    • Fu, Y.X.1    Li, W.H.2
  • 48
    • 0033911640 scopus 로고    scopus 로고
    • Hitchhiking under positive Darwinian selection
    • Fay JC, Wu CI. Hitchhiking under positive Darwinian selection. Genetics. 2000; 155: 1405-13.
    • (2000) Genetics. , vol.155 , pp. 1405-1413
    • Fay, J.C.1    Wu, C.I.2
  • 51
    • 30444460720 scopus 로고    scopus 로고
    • Global landscape of recent inferred Darwinian selection for Homo sapiens
    • Wang ET, Kodama G, Baldi P, Moyzis RK. Global landscape of recent inferred Darwinian selection for Homo sapiens. Proc Natl Acad Sci USA. 2006; 103: 135-40.
    • (2006) Proc Natl Acad Sci USA. , vol.103 , pp. 135-140
    • Wang, E.T.1    Kodama, G.2    Baldi, P.3    Moyzis, R.K.4
  • 54
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC. Estimating F-statistics for the analysis of population structure. Evolution. 1984; 38: 1358-70.
    • (1984) Evolution. , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 55
  • 57
    • 0036671928 scopus 로고    scopus 로고
    • Sequence variation and haplotype structure at the human HFE locus
    • Toomajian C, Kreitman M. Sequence variation and haplotype structure at the human HFE locus. Genetics. 2002; 161: 1609-23.
    • (2002) Genetics. , vol.161 , pp. 1609-1623
    • Toomajian, C.1    Kreitman, M.2
  • 59
    • 70350069921 scopus 로고    scopus 로고
    • Spatial patterns of variation due to natural selection in humans
    • Novembre J, Di Rienzo A. Spatial patterns of variation due to natural selection in humans. Nat Rev Genet. 2009; 10: 745-55.
    • (2009) Nat Rev Genet. , vol.10 , pp. 745-755
    • Novembre, J.1    Di Rienzo, A.2
  • 60
    • 77956491134 scopus 로고    scopus 로고
    • Using environmental correlations to identify loci underlying local adaptation
    • Coop G, Witonsky D, Di Rienzo A, Pritchard JK. Using environmental correlations to identify loci underlying local adaptation. Genetics. 2010; 185: 1411-23.
    • (2010) Genetics. , vol.185 , pp. 1411-1423
    • Coop, G.1    Witonsky, D.2    Di Rienzo, A.3    Pritchard, J.K.4
  • 67
    • 77149126374 scopus 로고    scopus 로고
    • The ADH1B Arg47His polymorphism in east Asian populations and expansion of rice domestication in history
    • Peng Y, Shi H, Qi XB, Xiao CJ, Zhong H, Ma RL, Su B. The ADH1B Arg47His polymorphism in east Asian populations and expansion of rice domestication in history. BMC Evol Biol. 2010; 10: 15.
    • (2010) BMC Evol Biol. , vol.10 , pp. 15
    • Peng, Y.1    Shi, H.2    Qi, X.B.3    Xiao, C.J.4    Zhong, H.5    Ma, R.L.6    Su, B.7
  • 71
    • 0033361760 scopus 로고    scopus 로고
    • Interaction between the functional polymorphisms of the alcohol-metabolism genes in protection against alcoholism
    • Chen CC, Lu RB, Chen YC, Wang MF, Chang YC, Li TK, Yin SJ. Interaction between the functional polymorphisms of the alcohol-metabolism genes in protection against alcoholism. Am J Hum Genet. 1999; 65: 795-807.
    • (1999) Am J Hum Genet. , vol.65 , pp. 795-807
    • Chen, C.C.1    Lu, R.B.2    Chen, Y.C.3    Wang, M.F.4    Chang, Y.C.5    Li, T.K.6    Yin, S.J.7
  • 73
    • 19344370697 scopus 로고    scopus 로고
    • Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates
    • Gilad Y, Przeworski M, Lancet D. Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates. PLoS Biol. 2004;2:E5.
    • (2004) PLoS Biol. , vol.2
    • Gilad, Y.1    Przeworski, M.2    Lancet, D.3
  • 74
    • 0038261971 scopus 로고    scopus 로고
    • Evolutionary deterioration of the vomeronasal pheromone transduction pathway in catarrhine primates
    • Zhang J, Webb DM. Evolutionary deterioration of the vomeronasal pheromone transduction pathway in catarrhine primates. Proc Natl Acad Sci USA. 2003; 100: 8337-41.
    • (2003) Proc Natl Acad Sci USA. , vol.100 , pp. 8337-8341
    • Zhang, J.1    Webb, D.M.2
  • 75
    • 8444225000 scopus 로고    scopus 로고
    • Relaxation of selective constraint and loss of function in the evolution of human bitter taste receptor genes
    • Wang X, Thomas SD, Zhang J. Relaxation of selective constraint and loss of function in the evolution of human bitter taste receptor genes. Hum Mol Genet. 2004; 13: 2671-8.
    • (2004) Hum Mol Genet. , vol.13 , pp. 2671-2678
    • Wang, X.1    Thomas, S.D.2    Zhang, J.3
  • 76
    • 2442684004 scopus 로고    scopus 로고
    • Relevance of connexin deafness (DFNB1) to human evolution
    • Nance WE, Kearsey MJ. Relevance of connexin deafness (DFNB1) to human evolution. Am J Hum Genet. 2004; 74: 1081-7.
    • (2004) Am J Hum Genet. , vol.74 , pp. 1081-1087
    • Nance, W.E.1    Kearsey, M.J.2
  • 77
    • 56449127484 scopus 로고    scopus 로고
    • Different selective pressures shape the molecular evolution of color vision in chimpanzee and human populations
    • Verrelli BC, Lewis CJ, Stone AC, Perry GH. Different selective pressures shape the molecular evolution of color vision in chimpanzee and human populations. Mol Biol Evol. 2008; 25: 2735-43.
    • (2008) Mol Biol Evol. , vol.25 , pp. 2735-2743
    • Verrelli, B.C.1    Lewis, C.J.2    Stone, A.C.3    Perry, G.H.4
  • 78
    • 0037452884 scopus 로고    scopus 로고
    • Relaxed selective pressure on an essential component of pheromone transduction in primate evolution
    • Liman ER, Innan H. Relaxed selective pressure on an essential component of pheromone transduction in primate evolution. Proc Natl Acad Sci USA. 2003; 100: 3328-32.
    • (2003) Proc Natl Acad Sci USA. , vol.100 , pp. 3328-3332
    • Liman, E.R.1    Innan, H.2
  • 81
    • 0038708520 scopus 로고    scopus 로고
    • Adaptive diversification of bitter taste receptor genes in Mammalian evolution
    • Shi P, Zhang J, Yang H, Zhang YP. Adaptive diversification of bitter taste receptor genes in Mammalian evolution. Mol Biol Evol. 2003; 20: 805-14.
    • (2003) Mol Biol Evol. , vol.20 , pp. 805-814
    • Shi, P.1    Zhang, J.2    Yang, H.3    Zhang, Y.P.4
  • 82
    • 0042040501 scopus 로고    scopus 로고
    • Evolutionary relationships of the Tas2r receptor gene families in mouse and human
    • Conte C, Ebeling M, Marcuz A, Nef P, Andres-Barquin PJ. Evolutionary relationships of the Tas2r receptor gene families in mouse and human. Physiol Genomics. 2003; 14: 73-82.
    • (2003) Physiol Genomics. , vol.14 , pp. 73-82
    • Conte, C.1    Ebeling, M.2    Marcuz, A.3    Nef, P.4    Andres-Barquin, P.J.5
  • 84
    • 14544295509 scopus 로고    scopus 로고
    • Evolution of bitter taste receptors in humans and apes
    • Fischer A, Gilad Y, Man O, Paabo S. Evolution of bitter taste receptors in humans and apes. Mol Biol Evol. 2005; 22: 432-6.
    • (2005) Mol Biol Evol. , vol.22 , pp. 432-436
    • Fischer, A.1    Gilad, Y.2    Man, O.3    Paabo, S.4
  • 89
    • 0033667684 scopus 로고    scopus 로고
    • Bitter taste, phytonutrients, and the consumer: a review
    • Drewnowski A, Gomez-Carneros C. Bitter taste, phytonutrients, and the consumer: a review. Am J Clin Nutr. 2000; 72: 1424-35.
    • (2000) Am J Clin Nutr. , vol.72 , pp. 1424-1435
    • Drewnowski, A.1    Gomez-Carneros, C.2
  • 90
    • 0021965878 scopus 로고
    • Paleolithic nutrition. A consideration of its nature and current implications
    • Eaton SB, Konner M. Paleolithic nutrition. A consideration of its nature and current implications. N Engl J Med. 1985; 312: 283-9.
    • (1985) N Engl J Med. , vol.312 , pp. 283-289
    • Eaton, S.B.1    Konner, M.2
  • 91
    • 0030940006 scopus 로고    scopus 로고
    • Paleolithic nutrition revisited: a twelve-year retrospective on its nature and implications
    • Eaton SB, Eaton SR, Konner MJ. Paleolithic nutrition revisited: a twelve-year retrospective on its nature and implications. Eur J Clin Nutr. 1997; 51: 207-16.
    • (1997) Eur J Clin Nutr. , vol.51 , pp. 207-216
    • Eaton, S.B.1    Eaton, S.R.2    Konner, M.J.3
  • 92
    • 56549098554 scopus 로고    scopus 로고
    • Thrifty genes for obesity, an attractive but flawed idea, and an alternative perspective: the'drifty gene' hypothesis
    • Speakman JR. Thrifty genes for obesity, an attractive but flawed idea, and an alternative perspective: the'drifty gene' hypothesis. Int J Obes (Lond). 2008; 32: 1611-7.
    • (2008) Int J Obes (Lond). , vol.32 , pp. 1611-1617
    • Speakman, J.R.1
  • 93
    • 77950847866 scopus 로고    scopus 로고
    • Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota
    • Hehemann JH, Correc G, Barbeyron T, Helbert W, Czjzek M, Michel G. Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota. Nature. 2010; 464: 908-12.
    • (2010) Nature. , vol.464 , pp. 908-912
    • Hehemann, J.H.1    Correc, G.2    Barbeyron, T.3    Helbert, W.4    Czjzek, M.5    Michel, G.6
  • 94
    • 32944466887 scopus 로고    scopus 로고
    • Ecological and evolutionary forces shaping microbial diversity in the human intestine
    • Ley RE, Peterson DA, Gordon JI. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell. 2006; 124: 837-48.
    • (2006) Cell. , vol.124 , pp. 837-848
    • Ley, R.E.1    Peterson, D.A.2    Gordon, J.I.3


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