Evaluation of four virus recovery methods for detecting noroviruses on fresh lettuce, sliced ham, and frozen raspberries

Journal of Virological Methods

Volumn 183, Issue 2, 2012, Pages 154-160

  Summa, Maija ^a   von Bonsdorff, Carl Henrik ^a   Maunula, Leena ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

Author keywords

Food; IMS; Norovirus; PEG precipitation; Ultracentrifugation; Ultrafiltration

Indexed keywords

MACROGOL; VIRUS RNA;

ARTICLE; CONTROLLED STUDY; FOOD CONTAMINATION; IMMUNOMAGNETIC SEPARATION; INTERMETHOD COMPARISON; LETTUCE; MEAT; MICROBIOLOGICAL PHENOMENA AND FUNCTIONS; NONHUMAN; NOROVIRUS; POLYETHYLENE GLYCOL PRECIPITATION; PRECIPITATION; PREDICTIVE VALUE; PRIORITY JOURNAL; RASPBERRY; REAL TIME POLYMERASE CHAIN REACTION; RNA EXTRACTION; SENSITIVITY AND SPECIFICITY; ULTRACENTRIFUGATION; ULTRAFILTRATION; VIRAL PHENOMENA AND FUNCTIONS; VIRUS CONCENTRATION; VIRUS DETECTION; VIRUS ELUTION; VIRUS RECOVERY;

CHEMICAL PRECIPITATION; CRYOPRESERVATION; FOOD MICROBIOLOGY; FRUIT; IMMUNOMAGNETIC SEPARATION; LETTUCE; MEAT PRODUCTS; NOROVIRUS; REAL-TIME POLYMERASE CHAIN REACTION; ROSACEAE; ULTRACENTRIFUGATION; ULTRAFILTRATION;

LACTUCA; NOROVIRUS;

EID: 84862151028     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2012.04.006     Document Type: Article

References (42)

1. Baert L., Uyttendaele M., Debevere J. Evaluation of viral extraction methods on a broad range of ready-to-eat foods with conventional and real-time RT-PCR for Norovirus GII detection. International Journal of Food Microbiology 2008, 123:101-108.
2. Boom R., Sol C.J.A., Salimans M.M.M., Jansen C.L., Wertheim-Van Dillen P.M.E., Ven Der Noordaa J. Rapid and simple method for purification of nucleic acids. Journal of Clinical Microbiology 1990, 28:495-503.
3. Boxman I.L.A., Tilburg J.J.H.C., te Loeke N.A.J.M., Vennema H., de Boer E., Koopmans M. An efficient and rapid method for recovery of norovirus from food associated with outbreaks of gastroenteritis. Journal of Food Protection 2007, 70:504-508.
4. Butot S., Putallaz T., Sánchez G. Procedure for rapid concentration and detection of enteric viruses from berries and vegetables. Applied and Environment Microbiology 2007, 73:186-192.
5. Cannon J.L., Papafragkou E., Park G.W., Osborne J., Jaykus L.-A., Vinjé J. Surrogates for the study of norovirus stability and inactivation in the environment: a comparison of murine norovirus and feline calicivirus. Journal of Food Protection 2006, 69:2761-2765.
6. Carter M.J. Enterically infecting viruses: pathogenicity, transmission and significance for food and waterborne infection. Journal of Applied Microbiology 2005, 98:1354-1380.
7. Daniels N.A., Bergmire-Sweat D.A., Schwab K.J., Hendricks K.A., Reddy S., Rowe S.M., Fankhauser R.L., Monroe S.S., Atmar R.L., Glass R.I., Mead P. A foodborne outbreak of gastroenteritis associated with Norwalk-like viruses: first molecular traceback to deli sandwiches contaminated during preparation. Journal of Infectious Diseases 2000, 181:1467-1470.
8. Dolin R., Blacklow N.R., DuPont H., Buscho R.F., Wyatt R.G., Kasel J.A., Hornick R., Chanock R.M. Biological properties of norwalk agent of acute infectious nonbacterial gastroenteritis. Proceedings of the Society for Experimental Biology and Medicine 1972, 140:578-583.
9. Dubois E., Agier C., Traoré O., Hennechart C., Merle G., Cruciére C., Laveran H. Modified concentration method for the detection of enteric viruses on fruits and vegetables by reverse transcriptase-polymerase chain reaction or cell culture. Journal of Food Protection 2002, 65:1962-1969.
10. Duizer E., Schwab K.J., Neill F.H., Atmar R.L., Koopmans M.P.G., Estes M.K. Laboratory efforts to cultivate noroviruses. Journal of General Virology 2004, 85:79-87.
11. Fumian T.M., Leite J.P.G., Marin V.A., Miagostovich M.A. A rapid procedure for detecting noroviruses from cheese and fresh lettuce. Journal of Virological Methods 2009, 155:39-43.
12. Green K.Y. Caliciviridae: the noroviruses. Fields Virology 2007, 949-979. Lippincott Williams & Wilkins, Philadelphia. fifth ed. D.M. Knipe, P.M. Howley (Eds.).
13. Guévremont E., Brassard J., Houde A., Simard C., Trottier Y.-L. Development of an extraction and concentration procedure and comparison of RT-PCR primer systems for the detection of hepatitis A virus and norovirus GII in green onions. Journal of Virological Methods 2006, 134:130-135.
14. Jean J., D'Souza D.H., Jayukus L.-A. Multiplex nucleic acid sequence-based amplification for simultaneous detection of several enteric viruses in model ready-to-eat foods. Applied and Environment Microbiology 2004, 70:6603-6610.
15. Kim H.-Y., Kwak I.-S., Hwang I.-G., Ko G.P. Optimization of methods for detecting norovirus on various fruit. Journal of Virological Methods 2008, 153:104-110.
16. Koopmans M., Duizer E. Foodborne viruses: an emerging problem. International Journal of Food Microbiology 2004, 90:23-41.
17. Lay M.K., Atmar R.L., Guix S., Bharadwaj U., He H., Neill F.H., Sastry K.J., Yao Q., Estes M.K. Norwalk virus does not replicate in human macrophages or dendritic cells derived from the peripheral blood of susceptible humans. Virology 2010, 406:1-11.
18. Le Guyader F.S., Schultz A.C., Haugarreau L., Croci L., Maunula L., Duizer E., Lodder-Verschoor F., von Bonsdorff C.-H., Suffredini E., van der Poel W.M.M., Reymundo R., Koopmans M. Round-robin comparison of methods for the detection of human enteric viruses in lettuce. Journal of Food Protection 2004, 67:2315-2319.
19. Le Guyader F.S., Mittelholzer C., Haugarreau L., Hedlund K.-O., Alsterlund R., Pommepuy M., Svensson L. Detection of noroviruses in raspberries associated with a gastroenteritis outbreak. International Journal of Food Microbiology 2004, 97:179-186.
20. Le Guyader F.S., Parnaudeau S., Schaeffer J., Bosch A., Loisy F., Pommepuy M., Atmar L.R. Detection an quantification of noroviruses in shellfish. Applied and Environment Microbiology 2009, 75:618-624.
21. Lees D. International standardisation of a method for detection of human pathogenic viruses in molluscan shellfish. Food and Environmental Virology 2010, 2:146-155.
22. Loisy F., Atmar R.L., Guillon P., Le Cann P., Pommepuy M., Le Guyader F.S. Real-time RT-PCR for norovirus screening in shellfish. Journal of Virological Methods 2005, 123:1-7.
23. Maunula L., Miettinen I.T., von Bonsdorff C.-H. Norovirus outbreaks from drinking water. Emerging Infectious Diseases 2005, 11:1716-1721.
24. Maunula L., Roivainen M., Keränen M., Mäkelä S., Söderberg K., Summa M., von Bonsdorff C.-H., Lappalainen M., Korhonen T., Kuusi M., Niskanen T. Detection of human noroviruses from frozen raspberries in a cluster of gastroenteritis outbreaks. Eurosurveillance 2009, 14(49). pii 19437.
25. Mormann S., Dabisch M., Becker B. Effects of technological processes on the tenacity and inactivation of norovirus genogroup II in experimentally contaminated foods. Applied and Environment Microbiology 2010, 76:536-545.
26. Caliciviridae. Virus Taxonomy Sixth Report of International Comittee on Taxonomy of Viruses 1995, 359-363. Springer-Verlag, Wien, New York. F.A. Murphy, C.M. Fauquet, D.H.L. Bishop, S.A. Ghabrial, A.W. Jarvis, G.P. Martelli, M.A. Mayo, M.D. Summers (Eds.).
27. Niskanen T., Korhonen T., Pihlajasaari A., Miettinen I., Siitonen A., Johansson T. Foodborne and Waterborne Outbreaks in Finland 2009 2011, vol. 2. Evira Publications, p. 69.
28. Park Y., Cho Y.-H., Jee Y., Ko G. Immunomagnetic separation combined with real-time reverse transcriptase PCR assays for detection of norovirus in contaminated food. Applied and Environment Microbiology 2008, 74:4226-4230.
29. Park H., Kim M., Ko G. Evaluation of various methods for recovering human norovirus and murine norovirus from vegetables and ham. Journal of Food Protection 2010, 73:1651-1657.
30. Pintó R.M., Costafreda M.I., Bosch A. Risk assessment shellfish-borne outbreaks of hepatitis A. Applied and Environment Microbiology 2009, 75:7350-7355.
31. Rutjes S.A., Lodder-Verschoor F., van der Poel W.H.M., van Duijnhoven Y.T.H.P., de Roda Husman A.M. Detection of noroviruses in foods: a study on virus extraction procedures in foods implicated in outbreaks of human gastroenteritis. Journal of Food Protection 2006, 69:1949-1956.
32. Rutjes S.A., van den Berg H.A.J.L., Lodder W.J., de Roda Husman A.M. Real-time detection of noroviruses in surface water by use of a broadly reactive nucleic acid sequence-based amplification assay. Applied and Environment Microbiology 2006, 72:5349-5358.
33. Rzezutka A., Alotaibi M., D'Agostino M., Cook N. A centrifugation-based method for extraction of norovirus from raspberries. Journal of Food Protection 2005, 68:1923-1925.
34. Scherer K., Johne R., Schrader C., Ellerbroek L., Schulenburg J., Klein G. Comparison of two extraction methods for viruses in food and application in a norovirus gastroenteritis outbreak. Journal of Virological Methods 2010, 169:22-27.
35. Schwab K.J., de Leon R., Sobsey M.D. Concentration and purification of beef extract mock eluates from water samples for the detection of enteroviruses, hepatitis A virus, and norwalk virus by reverse transcription-PCR. Applied and Environment Microbiology 1995, 61:531-537.
36. Schwab K.J., de Leon R., Sobsey M.D. Immunoaffinity concentration and purification of waterborne enteric viruses for detection by reverse transcriptase PCR. Applied and Environment Microbiology 1996, 62:2086-2094.
37. Stals A., Baert L., Van Coillie E., Uyttendaele M. Evaluation of a norovirus detection methodology for soft red fruits. Food Microbiology 2011, 28:52-58.
38. Stals A., Baert L., Jansson V., Van Coillie E., Uyttendaele M. Screening of fruit products for norovirus and the difficulty of interpreting positive PCR results. Journal of Food Protection 2011, 74:425-431.
39. Stals A., Baert L., Van Coillie E., Uyttendaele M. Extraction of food-borne viruses from food samples: a review. International Journal of Food Microbiology 2012, 153:1-9.
40. Straub T.M., Höner zu Bentrup K., Orosz-Coghlan P., Dohnalkova A., Mayer B.K., Bartholomew R.A., Valdez C.O., Bruckner-Lea C.J., Gerba C.P., Abbaszadegan M., Nickerson C.A. In vitro cell culture infectivity assay for human noroviruses. Emerging Infectious Diseases 2007, 13:396-403.
41. Wilson I.G. Inhibition and facilitation of nucleic acid amplification. Applied and Environment Microbiology 1997, 63:3741-3751.
42. Zheng D.-P., Ando T., Fankhauser R.L., Beard R.S., Glass R.I., Monroe S.S. Norovirus classification and proposed strain nomenclature. Virology 2006, 346:312-323.