Immunoaffinity concentration and purification of waterborne enteric viruses for detection by reverse transcriptase PCR

Applied and Environmental Microbiology

Volumn 62, Issue 6, 1996, Pages 2086-2094

  Schwab, Kellogg J ^a,c   De Leon, Ricardo ^b   Sobsey, Mark D ^a  

^a UNIVERSITY OF NORTH CAROLINA   (United States)

^b METROPOLITAN WATER DISTRICT OF SOUTHERN CALIFORNIA   (United States)

^c BAYLOR COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBODY AFFINITY; ARTICLE; ENTERIC VIRUS; FECES ANALYSIS; NONHUMAN; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RISK ASSESSMENT; WASTE WATER; WATER CONTAMINATION; WATER POLLUTION;

EID: 0029888559     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.62.6.2086-2094.1996     Document Type: Article

References (32)

1. Abbaszadegan, M., M. S. Huber, C. P. Gerba, and I. L. Pepper. 1993. Detection of enteroviruses in groundwater with the polymerase chain reaction. Appl. Environ. Microbiol. 59:1213-1219.
2. American Public Health Association. 1992. Standard methods for the examination of water and wastewater, 18th ed. American Public Health Association. Washington, D.C.
3. Atmar, R. L., F. H. Neill, J. L. Romalde, F. L. Guyader, C. M. Woodley, T. G. Metcalf, and M. K. Estes. 1995. Detection of Norwalk virus and hepatitis A virus in shellfish tissues with the PCR. Appl. Environ. Microbiol. 61:3014-3018.
4. Craun, G. F. 1988. Surface water supplies and health. Am. Water Works Assoc. J. 80:40-52.
5. Cromeans, T., M. D. Sobsey, and H. A. Fields. 1987. Development of a plaque assay for a cytopathic, rapidly replicating isolate of hepatitis A virus. J. Med. Virol. 22:45-56.
6. De Leon, R., S. M. Matsui, R. S. Banc, J. E. Herrmann, N. R. Blacklow, H. B. Greenberg, and M. D. Sobsey. 1992. Detection of Norwalk virus in stool specimens by reverse transcriptase-polymerase chain reaction and nonradioactive oligoprobes. J. Clin. Microbiol. 30:3151-3157.
7. Deng, M., S. P. Day, and D. O. Cliver. 1994. Detection of hepatitis A virus in environmental samples by antigen-capture PCR. Appl. Environ. Microbiol. 60:1927-1933.
8. Gerba, C. P., and J. B. Rose. 1990. Viruses in source and drinking water, p. 380-395. In G. A. McFeters (ed.), Drinking water microbiology. Springer-Verlag, New York.
9. Graff, J., J. Ticehurst, and B. Flehmig. 1993. Detection of hepatitis A virus in sewage sludge by antigen capture polymerase chain reaction. Appl. Environ. Microbiol. 59:3165-3170.
10. Hurst, C. J., W. H. Benton, and R. E. Stetler. 1989. Detecting viruses in water. Am. Water Works Assoc. J. 81:71-80.
11. Jansen, R. W., J. E. Newbold, and S. M. Lemon. 1985. Combined immuno-affinity cDNA-RNA hybridization assay for detection of hepatitis A virus in clinical specimens. J. Clin. Microbiol. 22:984-989.
12. Jansen, R. W., G. Siegl, and S. M. Lemon. 1990. Molecular epidemiology of human hepatitis A virus defined by an antigen-capture polymerase chain reaction method. Proc. Natl. Acad. Sci. USA 87:2867-2871.
13. Jiang, X., M. K. Estes, and T. G. Metcalf. 1987. Detection of hepatitis A virus by hybridization with single-stranded RNA probes. Appl. Environ. Microbiol. 53:2487-2495.
14. Jiang, X., M. K. Estes, T. G. Metcalf, and J. L. Melnick. 1986. Detection of hepatitis A virus in seeded estuarine samples by hybridization with cDNA probes, Appl. Environ. Microbiol. 52:711-717.
15. Jiang, X., J. Wang, D. Y. Graham, and M. K. Estes. 1992. Detection of Norwalk virus in stool by polymerase chain reaction. J. Clin. Microbiol. 30:2529-2534.
16. Kopecka, H., S. Dubrou, J. Prevot, J. Marechal, and J. M. Lopez-Pila. 1993. Detection of naturally occurring enteroviruses in waters by reverse transcription, polymerase chain reaction, and hybridization. Appl. Environ. Microbiol. 59:1213-1219.
17. Lappenbusch, W. L. 1986. Contaminated drinking water and your health. Lappenbusch Environmental Health Inc., Alexandria, Va.
18. McCaustland, K. A., S. Bi, M. A. Purdy, and D. W. Bradley. 1991. Application of two RNA extraction methods prior to amplification of hepatitis E virus nucleic acid by the polymerase chain reaction. J. Virol. Methods 35: 331-342.
19. Regli, S., J. B. Rose, C. N. Haas, and C. P. Gerba. 1991. Modeling the risk from giardia and viruses in drinking water. Am. Water Works Assoc. J. 83:76-84.
20. Rose, J. B., and C. P. Gerba. 1991. Use of risk assessment for development of microbial standards. Water Sci. Technol. 24:29-34.
21. Schwab, K. J., R. De Leon, and M. D. Sobsey. 1995. Concentration and purification of beef extract mock eluates from water samples for the detection of enteroviruses, hepatitis A virus, and Norwalk virus by reverse transcription-PCR. Appl. Environ. Microbiol. 61:531-537.
22. Shieh, Y. S. C., R. S. Baric, M. D. Sobsey, J. Ticehurst, R. De Leon, and R. Walter. 1991. Detection of hepatitis A virus and other enteroviruses in water by ssRNA probes. J. Virol. Methods 31:1119-1126.
23. Shieh, Y. S. C., D. Wait, L. Tai, and M. D. Sobsey. 1995. Methods to remove inhibitors in sewage and other fecal wastes for enterovirus detection by polymerase chain reaction. J. Virol. Methods 54:51-66.
24. Snead, M. C., V. P. Olivieri, K. Kawata, and C. W. Kruse. 1980. The effectiveness of chlorine residuals in inactivation of bacteria and viruses introduced by post-treatment contamination. Water Res. 14:403-408.
25. Sobsey, M. D. 1989. Inactivation of health-related microorganisms in water by disinfection processes. Water Sci. Technol. 21:179-195.
26. Sobsey, M. D. 1994. Molecular methods to detect viruses in environmental samples, p. 387-400. In R. C. Spencer, E. P. Wright, and S. W. B. Newsome (ed.), Rapid methods and automation in microbiology and immunology. Intercept Ltd., Andover, England.
27. Sobsey, M. D., A. Amante, and T. R. Handzel. 1996. Detection and occurrence of coliphage indicator viruses in water, p. 2087-2097. In Proceedings of the 1995 Water Quality Technology Conference. American Water Works Association, Denver.
28. Sobsey, M. D., D. A. Battigelli, T. R. Handzel, and K. J. Schwab. 1995. Male-specific coliphages as indicators of viral contamination of drinking water. American Water Works Association Research Foundation, Denver.
29. Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-517.
30. Tsai, Y.-L., M. D. Sobsey, L. R. Sangermano, and C. J. Palmer. 1993. Simple method of concentrating enteroviruses and hepatitis A virus from sewage and ocean water for rapid detection by reverse transcriptase-polymerase chain reaction. Appl. Environ. Microbiol. 59:3488-3491.
31. Tsai, Y.-L., B. Tran, and C. J. Palmer. 1995. Analysis of viral RNA persistence in seawater by reverse transcriptase-PCR. Appl. Environ. Microbiol. 61:363-366.
32. Yang, F., and X. Xu. 1993. A new method of RNA preparation for detection of hepatitis A virus in environmental samples by the polymerase chain reaction. J. Virol. Methods 43:77-84.