메뉴 건너뛰기




Volumn 133, Issue 5, 2012, Pages 338-347

Age-related changes in gene expression in tissues of the sea urchin Strongylocentrotus purpuratus

Author keywords

Aging; Gene expression; Microarray; Sea urchin

Indexed keywords

NOTCH RECEPTOR; PROTEASOME; UBIQUITIN; WNT1 PROTEIN;

EID: 84861233634     PISSN: 00476374     EISSN: 18726216     Source Type: Journal    
DOI: 10.1016/j.mad.2012.03.012     Document Type: Article
Times cited : (20)

References (48)
  • 1
    • 29244448340 scopus 로고    scopus 로고
    • Microarray data analysis: from disarray to consolidation and consensus
    • Allison D.B., Cui X., Page G.P., Sabripour M. Microarray data analysis: from disarray to consolidation and consensus. Nat. Rev. Genet. 2006, 7:55-65.
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 55-65
    • Allison, D.B.1    Cui, X.2    Page, G.P.3    Sabripour, M.4
  • 2
    • 77956668302 scopus 로고    scopus 로고
    • Cathepsin B facilitates autophagy-mediated apoptosis in SPARC overexpression primitive neuroectodermal tumor cells
    • Bhoopathi P., Chetty C., Gujrati M., Dinh D.H., Rao J.S., Lakka S. Cathepsin B facilitates autophagy-mediated apoptosis in SPARC overexpression primitive neuroectodermal tumor cells. Cell Death Differ. 2010, 17:1529-1539.
    • (2010) Cell Death Differ. , vol.17 , pp. 1529-1539
    • Bhoopathi, P.1    Chetty, C.2    Gujrati, M.3    Dinh, D.H.4    Rao, J.S.5    Lakka, S.6
  • 3
    • 67650627733 scopus 로고    scopus 로고
    • Marine invertebrates as models for aging research
    • Bodnar A.G. Marine invertebrates as models for aging research. Exp. Gerontol. 2009, 44:477-484. 10.1016/j.exger.2009.05.001.
    • (2009) Exp. Gerontol. , vol.44 , pp. 477-484
    • Bodnar, A.G.1
  • 4
    • 37549039009 scopus 로고    scopus 로고
    • A temporal switch from Notch to Wnt signaling in muscle stem cells is necessary for normal adult myogenesis
    • Brack A.S., Conboy I.M., Conboy M.J., Shen J., Rando T.A. A temporal switch from Notch to Wnt signaling in muscle stem cells is necessary for normal adult myogenesis. Cell Stem Cell 2008, 2:50-59.
    • (2008) Cell Stem Cell , vol.2 , pp. 50-59
    • Brack, A.S.1    Conboy, I.M.2    Conboy, M.J.3    Shen, J.4    Rando, T.A.5
  • 5
    • 34547924424 scopus 로고    scopus 로고
    • Increased Wnt signaling during aging alters muscle stem cell fate and increases fibrosis
    • Brack A.S., Conboy M.J., Roy S., Lee M., Kuo C.J., Keller C., Rando T.A. Increased Wnt signaling during aging alters muscle stem cell fate and increases fibrosis. Science 2007, 317:807-810.
    • (2007) Science , vol.317 , pp. 807-810
    • Brack, A.S.1    Conboy, M.J.2    Roy, S.3    Lee, M.4    Kuo, C.J.5    Keller, C.6    Rando, T.A.7
  • 8
    • 43049168216 scopus 로고    scopus 로고
    • Aging of signal transduction pathways and pathology
    • Carlson M.E., Silva H.S., Conboy I.M. Aging of signal transduction pathways and pathology. Exp. Cell Res. 2008, 314:1951-1961.
    • (2008) Exp. Cell Res. , vol.314 , pp. 1951-1961
    • Carlson, M.E.1    Silva, H.S.2    Conboy, I.M.3
  • 10
    • 0344827208 scopus 로고    scopus 로고
    • Notch-mediated restoration of regenerative potential to aged muscle
    • Conboy I.M., Conboy M.J., Smythe G.M., Rando T.A. Notch-mediated restoration of regenerative potential to aged muscle. Science 2003, 302:1575-1577.
    • (2003) Science , vol.302 , pp. 1575-1577
    • Conboy, I.M.1    Conboy, M.J.2    Smythe, G.M.3    Rando, T.A.4
  • 11
    • 33751509062 scopus 로고    scopus 로고
    • A genome-wide survey of the evolutionarily conserved Wnt pathways in the sea urchin Strongylocentrotus purpuratus
    • Croce J.C., Wu S.Y., Byrum C., Xu R., Duloquin L., Wikramanayake A.H., Gache C., McClay D.R. A genome-wide survey of the evolutionarily conserved Wnt pathways in the sea urchin Strongylocentrotus purpuratus. Dev. Biol. 2006, 300:121-131.
    • (2006) Dev. Biol. , vol.300 , pp. 121-131
    • Croce, J.C.1    Wu, S.Y.2    Byrum, C.3    Xu, R.4    Duloquin, L.5    Wikramanayake, A.H.6    Gache, C.7    McClay, D.R.8
  • 14
    • 77956859561 scopus 로고    scopus 로고
    • Growth and survival of post-settlement sea urchins
    • Elsevier, Amsterdam, The Netherlands, J.M. Lawrence (Ed.)
    • Ebert T.A. Growth and survival of post-settlement sea urchins. Edible Sea Urchins: Biology and Ecology 2001, 70-102. Elsevier, Amsterdam, The Netherlands. J.M. Lawrence (Ed.).
    • (2001) Edible Sea Urchins: Biology and Ecology , pp. 70-102
    • Ebert, T.A.1
  • 15
    • 65349129077 scopus 로고    scopus 로고
    • Growth and survival of post-settlement sea urchins
    • Elsevier, Amsterdam, The Netherlands, J.M. Lawrence (Ed.)
    • Ebert T.A. Growth and survival of post-settlement sea urchins. Edible Sea Urchins: Biology and Ecology 2007, 95-134. Elsevier, Amsterdam, The Netherlands. 2nd edition. J.M. Lawrence (Ed.).
    • (2007) Edible Sea Urchins: Biology and Ecology , pp. 95-134
    • Ebert, T.A.1
  • 16
    • 47749098870 scopus 로고    scopus 로고
    • Longevity and lack of senescence in the red sea urchin Strongylocentrotus franciscanus
    • Ebert T.A. Longevity and lack of senescence in the red sea urchin Strongylocentrotus franciscanus. Exp. Gerontol. 2008, 43:734-738.
    • (2008) Exp. Gerontol. , vol.43 , pp. 734-738
    • Ebert, T.A.1
  • 17
    • 77954102450 scopus 로고    scopus 로고
    • Demographic patterns of the purple sea urchin Strongylocentrotus purpuratus along a latitudinal gradient, 1985-1987
    • Ebert T.A. Demographic patterns of the purple sea urchin Strongylocentrotus purpuratus along a latitudinal gradient, 1985-1987. Mar. Ecol. Prog. Ser. 2010, 406:105-120.
    • (2010) Mar. Ecol. Prog. Ser. , vol.406 , pp. 105-120
    • Ebert, T.A.1
  • 19
    • 34147156889 scopus 로고    scopus 로고
    • Gene expression profiling of aging reveals activation of a p53-mediated transcriptional program
    • Edwards M.G., Anderson R.M., Yuan M., Kendziorski C.M., Weindruch R., Prolla T.A. Gene expression profiling of aging reveals activation of a p53-mediated transcriptional program. BMC Genomics 2007, 8:80. 10.1186/1471-2164-8-80.
    • (2007) BMC Genomics , vol.8 , pp. 80
    • Edwards, M.G.1    Anderson, R.M.2    Yuan, M.3    Kendziorski, C.M.4    Weindruch, R.5    Prolla, T.A.6
  • 21
    • 0035064006 scopus 로고    scopus 로고
    • History and prospects: symposium on organisms with slow aging
    • Finch C.E., Austad S.N. History and prospects: symposium on organisms with slow aging. Exp. Gerontol. 2001, 36:593-597.
    • (2001) Exp. Gerontol. , vol.36 , pp. 593-597
    • Finch, C.E.1    Austad, S.N.2
  • 22
    • 69949084150 scopus 로고    scopus 로고
    • Integrating evolutionary and molecular genetics of aging
    • Flatt T., Schmidt P.S. Integrating evolutionary and molecular genetics of aging. Biochim. Biophys. Acta 2009, 1790:951-962. 10.1016/j.bbagen.2009.07.010.
    • (2009) Biochim. Biophys. Acta , vol.1790 , pp. 951-962
    • Flatt, T.1    Schmidt, P.S.2
  • 23
    • 33746886678 scopus 로고    scopus 로고
    • Lack of age-associated telomere shortening in long- and short-lived species of sea urchins
    • Francis N., Gregg T., Owen R., Ebert T., Bodnar A. Lack of age-associated telomere shortening in long- and short-lived species of sea urchins. FEBS Lett. 2006, 580:4713-4717.
    • (2006) FEBS Lett. , vol.580 , pp. 4713-4717
    • Francis, N.1    Gregg, T.2    Owen, R.3    Ebert, T.4    Bodnar, A.5
  • 24
    • 20544447734 scopus 로고    scopus 로고
    • Notch signals control the fate of immature progenitor cells in the intestine
    • Fre S., Huyghe M., Mourikis P., Robine S., Louvard D. Notch signals control the fate of immature progenitor cells in the intestine. Nature 2005, 435:964-968.
    • (2005) Nature , vol.435 , pp. 964-968
    • Fre, S.1    Huyghe, M.2    Mourikis, P.3    Robine, S.4    Louvard, D.5
  • 25
    • 38449111466 scopus 로고    scopus 로고
    • Gene expression changes associated with aging in C. elegans (February 12, 2007)
    • Wormbook, Wormbook (Ed.)
    • Golden T.R., Melov S. Gene expression changes associated with aging in C. elegans (February 12, 2007). The C. elegans Research Community 2007, Wormbook. http://www.wormbook.org/, 10.1895/wormbook.1.127.2. Wormbook (Ed.).
    • (2007) The C. elegans Research Community
    • Golden, T.R.1    Melov, S.2
  • 26
    • 33747339465 scopus 로고    scopus 로고
    • Wnt signaling: multiple pathways, multiple receptors, and multiple transcription factors
    • Gordon M.D., Nusse R. Wnt signaling: multiple pathways, multiple receptors, and multiple transcription factors. J. Biol. Chem. 2006, 281:22429-22433.
    • (2006) J. Biol. Chem. , vol.281 , pp. 22429-22433
    • Gordon, M.D.1    Nusse, R.2
  • 27
    • 78049404330 scopus 로고    scopus 로고
    • Post-translational modification of cellular proteins by ubiquitin and ubiquitin-like molecules: role in cellular senescence and ageing
    • Grillari J., Grillari-Voglauer R., Jansen-Dürr P. Post-translational modification of cellular proteins by ubiquitin and ubiquitin-like molecules: role in cellular senescence and ageing. Adv. Exp. Med. Biol. 2010, 694:172-196.
    • (2010) Adv. Exp. Med. Biol. , vol.694 , pp. 172-196
    • Grillari, J.1    Grillari-Voglauer, R.2    Jansen-Dürr, P.3
  • 28
    • 77950076985 scopus 로고    scopus 로고
    • Neurogenic radial glia in the outer subventricular zone of human neocortex
    • Hansen D.V., Lui J.H., Parker P.R.L., Kriegstein A.R. Neurogenic radial glia in the outer subventricular zone of human neocortex. Nature 2010, 464:554-561.
    • (2010) Nature , vol.464 , pp. 554-561
    • Hansen, D.V.1    Lui, J.H.2    Parker, P.R.L.3    Kriegstein, A.R.4
  • 29
    • 45449087921 scopus 로고    scopus 로고
    • QBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
    • Hellemans J., Mortier G., De Paepe A., Speleman F., Vandesompele J. qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol. 2007, 8:R19.
    • (2007) Genome Biol. , vol.8
    • Hellemans, J.1    Mortier, G.2    De Paepe, A.3    Speleman, F.4    Vandesompele, J.5
  • 32
    • 33745816760 scopus 로고    scopus 로고
    • Protein degradation by the ubiquitin-proteasome pathway in normal and disease states
    • Lecker S.H., Goldberg A.L., Mitch W.E. Protein degradation by the ubiquitin-proteasome pathway in normal and disease states. J. Am. Soc. Nephrol. 2006, 17:1807-1819.
    • (2006) J. Am. Soc. Nephrol. , vol.17 , pp. 1807-1819
    • Lecker, S.H.1    Goldberg, A.L.2    Mitch, W.E.3
  • 36
    • 38249033798 scopus 로고
    • Life history traits and resource allocation in the purple sea urchin Strongylocentrotus purpuratus (Stimpson)
    • Russell M. Life history traits and resource allocation in the purple sea urchin Strongylocentrotus purpuratus (Stimpson). J. Exp. Mar. Biol. Ecol. 1987, 108:199-216.
    • (1987) J. Exp. Mar. Biol. Ecol. , vol.108 , pp. 199-216
    • Russell, M.1
  • 38
    • 33750995860 scopus 로고    scopus 로고
    • The genome of the sea urchin Strongylocentrotus purpuratus
    • The Sea Urchin Genome Sequencing Consortium
    • Sodergren, et al. The genome of the sea urchin Strongylocentrotus purpuratus. Science 2006, 314:941-952. The Sea Urchin Genome Sequencing Consortium.
    • (2006) Science , vol.314 , pp. 941-952
    • Sodergren1
  • 39
    • 0034571008 scopus 로고    scopus 로고
    • Molecular chaperones and the aging process
    • Söti C., Csermely P. Molecular chaperones and the aging process. Biogerontology 2000, 1:225-233.
    • (2000) Biogerontology , vol.1 , pp. 225-233
    • Söti, C.1    Csermely, P.2
  • 41
    • 36549020042 scopus 로고    scopus 로고
    • Protein synthesis is a novel determinant of aging in Caenorhabditis elegans
    • Syntichaki P., Troulinaki K., Tavernarakis N. Protein synthesis is a novel determinant of aging in Caenorhabditis elegans. Ann. N.Y. Acad. Sci. 2007, 1119:289-295.
    • (2007) Ann. N.Y. Acad. Sci. , vol.1119 , pp. 289-295
    • Syntichaki, P.1    Troulinaki, K.2    Tavernarakis, N.3
  • 42
    • 27644585190 scopus 로고    scopus 로고
    • A role for SIR-2.1 regulation of ER stress response genes in determining C. elegans life span
    • Viswanathan M., Kim S.K., Berdichevsky A., Guarente L. A role for SIR-2.1 regulation of ER stress response genes in determining C. elegans life span. Dev. Cell 2005, 9:605-615.
    • (2005) Dev. Cell , vol.9 , pp. 605-615
    • Viswanathan, M.1    Kim, S.K.2    Berdichevsky, A.3    Guarente, L.4
  • 43
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • research 0034.1-0034.11
    • Vandesompele J., De Preter K., Pattyn F., Poppe B., Van Roy N., De Paepe A., Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 2002, 3(7). research 0034.1-0034.11.
    • (2002) Genome Biol. , vol.3 , Issue.7
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 44
    • 33751503196 scopus 로고    scopus 로고
    • Genomics and expression profiles of the Hedgehog and Notch signaling pathways in sea urchin development
    • Walton K.D., Croce J.C., Glenn T.D., Wu S.Y., McClay D.R. Genomics and expression profiles of the Hedgehog and Notch signaling pathways in sea urchin development. Dev. Biol. 2006, 300:153-164.
    • (2006) Dev. Biol. , vol.300 , pp. 153-164
    • Walton, K.D.1    Croce, J.C.2    Glenn, T.D.3    Wu, S.Y.4    McClay, D.R.5
  • 45
    • 34248200124 scopus 로고    scopus 로고
    • A database of mRNA expression patterns for the sea urchin embryo
    • Wei Z., Angerer R.C., Angerer L.M. A database of mRNA expression patterns for the sea urchin embryo. Dev. Biol. 2006, 300:476-484.
    • (2006) Dev. Biol. , vol.300 , pp. 476-484
    • Wei, Z.1    Angerer, R.C.2    Angerer, L.M.3
  • 46
    • 0036132452 scopus 로고    scopus 로고
    • Gene expression profiling of aging using DNA microarrays
    • Weindruch R., Kayo T., Lee C-K., Prolla T.A. Gene expression profiling of aging using DNA microarrays. Mech. Ageing Dev. 2002, 123:177-193.
    • (2002) Mech. Ageing Dev. , vol.123 , pp. 177-193
    • Weindruch, R.1    Kayo, T.2    Lee, C.-K.3    Prolla, T.A.4
  • 47
    • 0347768064 scopus 로고    scopus 로고
    • Senescence-related changes in gene expression in muscle similarities and differences between mice and men
    • Welle S., Brooks A., Thornton C.A. Senescence-related changes in gene expression in muscle similarities and differences between mice and men. Physiol. Genomics 2001, 5:67-73.
    • (2001) Physiol. Genomics , vol.5 , pp. 67-73
    • Welle, S.1    Brooks, A.2    Thornton, C.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.