메뉴 건너뛰기




Volumn 37, Issue SUPPL. 1, 2009, Pages

SpBase: The sea urchin genome database and web site

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

EID: 58149199570     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkn887     Document Type: Article
Times cited : (166)

References (28)
  • 1
    • 51549120104 scopus 로고    scopus 로고
    • The purple sea urchin genome
    • The Sea Urchin Sequencing Consortium
    • The Sea Urchin Sequencing Consortium (2006) The purple sea urchin genome. Science, 314, 941-952.
    • (2006) Science , vol.314 , pp. 941-952
  • 2
    • 34547624884 scopus 로고    scopus 로고
    • A missing link in the sea urchin embryo gene regulatory network: HesC and the double-negative specification of micromeres
    • Revilla-i-Domingo,R., Oliveri,P. and Davidson,E.H. (2007) A missing link in the sea urchin embryo gene regulatory network: HesC and the double-negative specification of micromeres. Proc. Natl Acad. Sci. USA, 104, 12383-12388.
    • (2007) Proc. Natl Acad. Sci. USA , vol.104 , pp. 12383-12388
    • Revilla-i-Domingo, R.1    Oliveri, P.2    Davidson, E.H.3
  • 4
    • 0028967345 scopus 로고
    • Phylogeny, rates of evolution, and patterns of codon usage among sea urchin retroviral-like elements, with implications for the recognition of horizontal transfer
    • Springer,M.S., Tusneem,N.A., Davidson,E.H. and Britten,R.J. (1995) Phylogeny, rates of evolution, and patterns of codon usage among sea urchin retroviral-like elements, with implications for the recognition of horizontal transfer. Mol. Biol. Evol., 12, 219-230.
    • (1995) Mol. Biol. Evol , vol.12 , pp. 219-230
    • Springer, M.S.1    Tusneem, N.A.2    Davidson, E.H.3    Britten, R.J.4
  • 5
    • 0033048228 scopus 로고    scopus 로고
    • Evolution of Sea Urchin Retroviral-Like (SURL) elements: Evidence from 40 Echinoid species
    • Gonzalez,P. and Lessios,H.A. (1999) Evolution of Sea Urchin Retroviral-Like (SURL) elements: Evidence from 40 Echinoid species. Mol. Biol. Evol., 16, 938-952.
    • (1999) Mol. Biol. Evol , vol.16 , pp. 938-952
    • Gonzalez, P.1    Lessios, H.A.2
  • 6
    • 0029654308 scopus 로고
    • A combined morphological and molecular phylogeny for sea urchins (Echinoidea: Echinodermata)
    • Littlewood,D.T.J. and Smith,A.B. (1995) A combined morphological and molecular phylogeny for sea urchins (Echinoidea: Echinodermata). Phil. Trans. R. Soc. Lond. B, 347, 213-234.
    • (1995) Phil. Trans. R. Soc. Lond. B , vol.347 , pp. 213-234
    • Littlewood, D.T.J.1    Smith, A.B.2
  • 11
    • 0034760329 scopus 로고    scopus 로고
    • A clonearray pooled shotgun strategy for sequencing large genomes
    • Cai,W.W., Chen,R., Gibbs,R.A. and Bradley,A. (2001) A clonearray pooled shotgun strategy for sequencing large genomes. Genome Res., 11 1619-1623.
    • (2001) Genome Res , vol.11 , pp. 1619-1623
    • Cai, W.W.1    Chen, R.2    Gibbs, R.A.3    Bradley, A.4
  • 13
    • 58149182285 scopus 로고    scopus 로고
    • Souvorov,A., Tatusova,T. and Lipman,D.J. (2004) Genome annotation with Gnomon - A multi-step combined gene prediction tool. National Center for Biotechnology Information http://www.ncbi.nlm.nih.gov/projects/genome/ guide/gnomon.shtml (30 October 2008, date last accessed).
    • Souvorov,A., Tatusova,T. and Lipman,D.J. (2004) Genome annotation with Gnomon - A multi-step combined gene prediction tool. National Center for Biotechnology Information http://www.ncbi.nlm.nih.gov/projects/genome/ guide/gnomon.shtml (30 October 2008, date last accessed).
  • 14
    • 0034065724 scopus 로고    scopus 로고
    • Ab initio gene finding in Drosophila genomic DNA
    • Salamov,A.A. and Solovyev,V.V. (2000) Ab initio gene finding in Drosophila genomic DNA. Genome Res., 10, 516-522.
    • (2000) Genome Res , vol.10 , pp. 516-522
    • Salamov, A.A.1    Solovyev, V.V.2
  • 15
    • 0012190262 scopus 로고    scopus 로고
    • Statistical approaches in eukaryotic gene prediction
    • Balding,D.E.A, ed, John Wiley and Sons, Ltd, Chichester, New York, pp
    • Solovyev,V.V. (2001) Statistical approaches in eukaryotic gene prediction. In Balding,D.E.A. (ed.), Handbook of Statistical Genetics John Wiley and Sons, Ltd, Chichester, New York, pp. 83-127.
    • (2001) Handbook of Statistical Genetics , pp. 83-127
    • Solovyev, V.V.1
  • 16
    • 34248200124 scopus 로고    scopus 로고
    • A database of mRNA expression patterns for the sea urchin embryo
    • Wei,Z., Angerer,R.C. and Angerer,L.M. (2006) A database of mRNA expression patterns for the sea urchin embryo. Dev. Biol., 300 476-484.
    • (2006) Dev. Biol , vol.300 , pp. 476-484
    • Wei, Z.1    Angerer, R.C.2    Angerer, L.M.3
  • 20
    • 34547634659 scopus 로고    scopus 로고
    • High regulatory gene use in sea urchin embryogenesis: Implications for bilaterian development and evolution
    • Howard-Ashby,M., Materna,S.C., Brown,C.T., Tu,Q., Oliveri,P., Cameron,R.A. and Davidson,E.H. (2006) High regulatory gene use in sea urchin embryogenesis: Implications for bilaterian development and evolution. Dev. Biol., 300, 27-34.
    • (2006) Dev. Biol , vol.300 , pp. 27-34
    • Howard-Ashby, M.1    Materna, S.C.2    Brown, C.T.3    Tu, Q.4    Oliveri, P.5    Cameron, R.A.6    Davidson, E.H.7
  • 21
    • 34547844136 scopus 로고    scopus 로고
    • A Chado case study: An ontology-based modular schema for representing genome-associated biological information
    • Mungall,C.J. and Emmert,D.B. (2007) A Chado case study: An ontology-based modular schema for representing genome-associated biological information. Bioinformatics, 23, I337-I346.
    • (2007) Bioinformatics , vol.23
    • Mungall, C.J.1    Emmert, D.B.2
  • 27
    • 33947396707 scopus 로고    scopus 로고
    • Built to run, not fail
    • Oliveri,P. and Davidson,E.H. (2007) Built to run, not fail. Science 315, 1510-1511.
    • (2007) Science , vol.315 , pp. 1510-1511
    • Oliveri, P.1    Davidson, E.H.2
  • 28
    • 14044254746 scopus 로고    scopus 로고
    • Textpresso: An ontology-based information retrieval and extraction system for biological literature
    • Epub ahead of print 21 September
    • Müller,H.M., Kenny,E.E. and Sternberg,P.W. (2004) Textpresso: An ontology-based information retrieval and extraction system for biological literature. PLoS Biol., 2, e309 [Epub ahead of print 21 September 2004].
    • (2004) PLoS Biol , vol.2
    • Müller, H.M.1    Kenny, E.E.2    Sternberg, P.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.