-
1
-
-
21344470923
-
Circadian rhythms from multiple oscillators: lessons from diverse organisms
-
Bell-Pedersen D, Cassone VM, Earnest DJ, Golden SS, Hardin PE, et al. (2005) Circadian rhythms from multiple oscillators: lessons from diverse organisms. Nat Rev Genet 6: 544-556.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 544-556
-
-
Bell-Pedersen, D.1
Cassone, V.M.2
Earnest, D.J.3
Golden, S.S.4
Hardin, P.E.5
-
2
-
-
34247515224
-
Riding tandem: circadian clocks and the cell cycle
-
Hunt T, Sassone-Corsi P, (2007) Riding tandem: circadian clocks and the cell cycle. Cell 129: 461-464.
-
(2007)
Cell
, vol.129
, pp. 461-464
-
-
Hunt, T.1
Sassone-Corsi, P.2
-
3
-
-
44249099016
-
Circadian rhythms. Integrating circadian timekeeping with cellular physiology
-
Harrisingh MC, Nitabach MN, (2008) Circadian rhythms. Integrating circadian timekeeping with cellular physiology. Science 320: 879-880.
-
(2008)
Science
, vol.320
, pp. 879-880
-
-
Harrisingh, M.C.1
Nitabach, M.N.2
-
4
-
-
67651176270
-
Circadian regulation of ion channels and their functions
-
Ko GY, Shi L, Ko ML, (2009) Circadian regulation of ion channels and their functions. J Neurochem 110: 1150-1169.
-
(2009)
J Neurochem
, vol.110
, pp. 1150-1169
-
-
Ko, G.Y.1
Shi, L.2
Ko, M.L.3
-
5
-
-
34247161251
-
The Neurospora crassa circadian clock
-
Heintzen C, Liu Y, (2007) The Neurospora crassa circadian clock. Adv Genet 58: 25-66.
-
(2007)
Adv Genet
, vol.58
, pp. 25-66
-
-
Heintzen, C.1
Liu, Y.2
-
6
-
-
48249118793
-
A circadian clock in Neurospora: how genes and proteins cooperate to produce a sustained, entrainable, and compensated biological oscillator with a period of about a day
-
Dunlap JC, Loros JJ, Colot HV, Mehra A, Belden WJ, et al. (2007) A circadian clock in Neurospora: how genes and proteins cooperate to produce a sustained, entrainable, and compensated biological oscillator with a period of about a day. Cold Spring Harb Symp Quant Biol 72: 57-68.
-
(2007)
Cold Spring Harb Symp Quant Biol
, vol.72
, pp. 57-68
-
-
Dunlap, J.C.1
Loros, J.J.2
Colot, H.V.3
Mehra, A.4
Belden, W.J.5
-
7
-
-
0001757026
-
On Temperature Independence in the Clock System Controlling Emergence Time in Drosophila
-
Pittendrigh CS, (1954) On Temperature Independence in the Clock System Controlling Emergence Time in Drosophila. Proc Natl Acad Sci U S A 40: 1018-1029.
-
(1954)
Proc Natl Acad Sci U S A
, vol.40
, pp. 1018-1029
-
-
Pittendrigh, C.S.1
-
8
-
-
0033593306
-
Molecular bases for crcadian clocks
-
Dunlap JC, (1999) Molecular bases for crcadian clocks. Cell 96: 271-290.
-
(1999)
Cell
, vol.96
, pp. 271-290
-
-
Dunlap, J.C.1
-
9
-
-
56949083657
-
How a cyanobacterium tells time
-
Dong G, Golden SS, (2008) How a cyanobacterium tells time. Curr Opin Microbiol 11: 541-546.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 541-546
-
-
Dong, G.1
Golden, S.S.2
-
10
-
-
45149098327
-
Probing the relative importance of molecular oscillations in the circadian clock
-
Zheng X, Sehgal A, (2008) Probing the relative importance of molecular oscillations in the circadian clock. Genetics 178: 1147-1155.
-
(2008)
Genetics
, vol.178
, pp. 1147-1155
-
-
Zheng, X.1
Sehgal, A.2
-
11
-
-
34247390706
-
Molecular circadian rhythms in central and peripheral clocks in mammals
-
Dardente H, Cermakian N, (2007) Molecular circadian rhythms in central and peripheral clocks in mammals. Chronobiol Int 24: 195-213.
-
(2007)
Chronobiol Int
, vol.24
, pp. 195-213
-
-
Dardente, H.1
Cermakian, N.2
-
12
-
-
0035047711
-
Genetic and molecular analysis of circadian rhythms in Neurospora
-
Loros JJ, Dunlap JC, (2001) Genetic and molecular analysis of circadian rhythms in Neurospora. Annu Rev Physiol 63: 757-794.
-
(2001)
Annu Rev Physiol
, vol.63
, pp. 757-794
-
-
Loros, J.J.1
Dunlap, J.C.2
-
13
-
-
0035912804
-
Interlocked feedback loops contribute to the robustness of the Neurospora circadian clock
-
Cheng P, Yang Y, Liu Y, (2001) Interlocked feedback loops contribute to the robustness of the Neurospora circadian clock. Proc Natl Acad Sci U S A 98: 7408-7413.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 7408-7413
-
-
Cheng, P.1
Yang, Y.2
Liu, Y.3
-
14
-
-
58049206594
-
Circadian activity and abundance rhythms of the Neurospora clock transcription factor WCC associated with rapid nucleo-cytoplasmic shuttling
-
Schafmeier T, Diernfellner A, Schafer A, Dintsis O, Neiss A, et al. (2008) Circadian activity and abundance rhythms of the Neurospora clock transcription factor WCC associated with rapid nucleo-cytoplasmic shuttling. Genes Dev 22: 3397-3402.
-
(2008)
Genes Dev
, vol.22
, pp. 3397-3402
-
-
Schafmeier, T.1
Diernfellner, A.2
Schafer, A.3
Dintsis, O.4
Neiss, A.5
-
15
-
-
33748687611
-
CKI and CKII mediate the FREQUENCY-dependent phosphorylation of the WHITE COLLAR complex to close the Neurospora circadian negative feedback loop
-
He Q, Cha J, Lee HC, Yang Y, Liu Y, (2006) CKI and CKII mediate the FREQUENCY-dependent phosphorylation of the WHITE COLLAR complex to close the Neurospora circadian negative feedback loop. Genes Dev 20: 2552-2565.
-
(2006)
Genes Dev
, vol.20
, pp. 2552-2565
-
-
He, Q.1
Cha, J.2
Lee, H.C.3
Yang, Y.4
Liu, Y.5
-
16
-
-
22744455874
-
Transcriptional feedback of Neurospora circadian clock gene by phosphorylation-dependent inactivation of its transcription factor
-
Schafmeier T, Haase A, Káldi K, Scholz J, Fuchs M, et al. (2005) Transcriptional feedback of Neurospora circadian clock gene by phosphorylation-dependent inactivation of its transcription factor. Cell 122: 235-246.
-
(2005)
Cell
, vol.122
, pp. 235-246
-
-
Schafmeier, T.1
Haase, A.2
Káldi, K.3
Scholz, J.4
Fuchs, M.5
-
17
-
-
48649095824
-
Transcriptional regulation and function of the Neurospora clock gene white collar 2 and its isoforms
-
Neiss A, Schafmeier T, Brunner M, (2008) Transcriptional regulation and function of the Neurospora clock gene white collar 2 and its isoforms. EMBO Rep 9: 788-794.
-
(2008)
EMBO Rep
, vol.9
, pp. 788-794
-
-
Neiss, A.1
Schafmeier, T.2
Brunner, M.3
-
19
-
-
0031014876
-
White collar 2, a partner in blue-light signal transduction, controlling expression of light-regulated genes in Neurospora crassa
-
Linden H, Macino G, (1997) White collar 2, a partner in blue-light signal transduction, controlling expression of light-regulated genes in Neurospora crassa. EMBO J 16: 98-109.
-
(1997)
EMBO J
, vol.16
, pp. 98-109
-
-
Linden, H.1
Macino, G.2
-
20
-
-
0037008528
-
White Collar-1, a circadian blue light photoreceptor, binding to the frequency promoter
-
Froehlich AC, Liu Y, Loros JJ, Dunlap JC, (2002) White Collar-1, a circadian blue light photoreceptor, binding to the frequency promoter. Science 297: 815-819.
-
(2002)
Science
, vol.297
, pp. 815-819
-
-
Froehlich, A.C.1
Liu, Y.2
Loros, J.J.3
Dunlap, J.C.4
-
21
-
-
0141848660
-
VIVID is a flavoprotein and serves as a fungal blue light photoreceptor for photoadaptation
-
Schwerdtfeger C, Linden H, (2003) VIVID is a flavoprotein and serves as a fungal blue light photoreceptor for photoadaptation. EMBO J 22: 4846-4855.
-
(2003)
EMBO J
, vol.22
, pp. 4846-4855
-
-
Schwerdtfeger, C.1
Linden, H.2
-
22
-
-
0035830504
-
The PAS protein VIVID defines a clock-associated feedback loop that represses light input, modulates gating, and regulates clock resetting
-
Heintzen C, Loros JJ, Dunlap JC, (2001) The PAS protein VIVID defines a clock-associated feedback loop that represses light input, modulates gating, and regulates clock resetting. Cell 104: 453-464.
-
(2001)
Cell
, vol.104
, pp. 453-464
-
-
Heintzen, C.1
Loros, J.J.2
Dunlap, J.C.3
-
23
-
-
78049265818
-
VIVID interacts with the WHITE COLLAR complex and FREQUENCY-interacting RNA helicase to alter light and clock responses in Neurospora
-
Hunt SM, Thompson S, Elvin M, Heintzen C, (2010) VIVID interacts with the WHITE COLLAR complex and FREQUENCY-interacting RNA helicase to alter light and clock responses in Neurospora. Proc Natl Acad Sci U S A 107: 16709-16714.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 16709-16714
-
-
Hunt, S.M.1
Thompson, S.2
Elvin, M.3
Heintzen, C.4
-
24
-
-
78049320276
-
Physical interaction between VIVID and white collar complex regulates photoadaptation in Neurospora
-
Chen CH, DeMay BS, Gladfelter AS, Dunlap JC, Loros JJ, (2010) Physical interaction between VIVID and white collar complex regulates photoadaptation in Neurospora. Proc Natl Acad Sci U S A 107: 16715-16720.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 16715-16720
-
-
Chen, C.H.1
DeMay, B.S.2
Gladfelter, A.S.3
Dunlap, J.C.4
Loros, J.J.5
-
25
-
-
77956168212
-
Photoadaptation in Neurospora by competitive interaction of activating and inhibitory LOV domains
-
Malzahn E, Ciprianidis S, ldi KK, Schafmeier T, Brunner M, (2010) Photoadaptation in Neurospora by competitive interaction of activating and inhibitory LOV domains. Cell 142: 762-772.
-
(2010)
Cell
, vol.142
, pp. 762-772
-
-
Malzahn, E.1
Ciprianidis, S.2
Ldi, K.K.3
Schafmeier, T.4
Brunner, M.5
-
26
-
-
0029846766
-
Circadian rhythms and protein turnover: the effect of temperature on the period lengths of clock mutants simulated by the Goodwin oscillator
-
Ruoff P, Mohsenzadeh S, Rensing L, (1996) Circadian rhythms and protein turnover: the effect of temperature on the period lengths of clock mutants simulated by the Goodwin oscillator. Naturwissenschaften 83: 514-517.
-
(1996)
Naturwissenschaften
, vol.83
, pp. 514-517
-
-
Ruoff, P.1
Mohsenzadeh, S.2
Rensing, L.3
-
27
-
-
0029991824
-
The temperature compensated Goodwin model simulates many circadian clock properties
-
Ruoff P, Rensing L, (1996) The temperature compensated Goodwin model simulates many circadian clock properties. J Theor Biol 179: 275-285.
-
(1996)
J Theor Biol
, vol.179
, pp. 275-285
-
-
Ruoff, P.1
Rensing, L.2
-
28
-
-
0033375755
-
Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora
-
Leloup J-C, Gonze D, Goldbeter1 A, (1999) Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora. J Biol Rhythms 14: 433-448.
-
(1999)
J Biol Rhythms
, vol.14
, pp. 433-448
-
-
Leloup, J.-C.1
Gonze, D.2
Goldbeter1, A.3
-
29
-
-
22144490453
-
A model for the Neurospora circadian clock
-
Francois P, (2005) A model for the Neurospora circadian clock. Biophys J 88: 2369-2383.
-
(2005)
Biophys J
, vol.88
, pp. 2369-2383
-
-
Francois, P.1
-
30
-
-
29144492754
-
The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock
-
Ruoff P, Loros JJ, Dunlap JC, (2005) The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock. Proc Natl Acad Sci U S A 102: 17681-17686.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 17681-17686
-
-
Ruoff, P.1
Loros, J.J.2
Dunlap, J.C.3
-
31
-
-
38949103460
-
Simulating dark expressions and interactions of frq and wc-1 in the Neurospora circadian clock
-
Hong CI, Jolma IW, Loros JJ, Dunlap JC, Ruoff P, (2008) Simulating dark expressions and interactions of frq and wc-1 in the Neurospora circadian clock. Biophys J 94: 1221-1232.
-
(2008)
Biophys J
, vol.94
, pp. 1221-1232
-
-
Hong, C.I.1
Jolma, I.W.2
Loros, J.J.3
Dunlap, J.C.4
Ruoff, P.5
-
32
-
-
65549088967
-
A role for Casein Kinase 2 in the mechanism underlying circadian temperature compensation
-
Mehra A, Shi M, Baker CL, Colot HV, Loros JJ, et al. (2009) A role for Casein Kinase 2 in the mechanism underlying circadian temperature compensation. Cell 137: 749-760.
-
(2009)
Cell
, vol.137
, pp. 749-760
-
-
Mehra, A.1
Shi, M.2
Baker, C.L.3
Colot, H.V.4
Loros, J.J.5
-
33
-
-
33751251331
-
How fungi keep time: circadian system in Neurospora and other fungi
-
Dunlap JC, Loros JJ, (2006) How fungi keep time: circadian system in Neurospora and other fungi. Curr Opin Microbiol 9: 579-587.
-
(2006)
Curr Opin Microbiol
, vol.9
, pp. 579-587
-
-
Dunlap, J.C.1
Loros, J.J.2
-
34
-
-
0037947690
-
Rhythmic binding of a WHITE COLLAR-containing complex to the frequency promoter is inhibited by FREQUENCY
-
Froehlich AC, Loros JJ, Dunlap JC, (2003) Rhythmic binding of a WHITE COLLAR-containing complex to the frequency promoter is inhibited by FREQUENCY. Proc Natl Acad Sci U S A 100: 5914-5919.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 5914-5919
-
-
Froehlich, A.C.1
Loros, J.J.2
Dunlap, J.C.3
-
35
-
-
33645813397
-
Transcriptional regulation of the Neurospora circadian clock gene wc-1 affects the phase of circadian output
-
Káldi K, González BH, Brunner M, (2006) Transcriptional regulation of the Neurospora circadian clock gene wc-1 affects the phase of circadian output. EMBO Rep 7: 199-204.
-
(2006)
EMBO Rep
, vol.7
, pp. 199-204
-
-
Káldi, K.1
González, B.H.2
Brunner, M.3
-
36
-
-
12144266896
-
Regulation of the Neurospora circadian clock by an RNA helicase
-
Cheng P, He Q, He Q, Wang L, Liu1 Y, (2005) Regulation of the Neurospora circadian clock by an RNA helicase. Genes Dev 19: 234-241.
-
(2005)
Genes Dev
, vol.19
, pp. 234-241
-
-
Cheng, P.1
He, Q.2
He, Q.3
Wang, L.4
Liu1, Y.5
-
37
-
-
70349136696
-
Phosphorylation modulates rapid nucleocytoplasmic shuttling and cytoplasmic accumulation of Neurospora clock protein FRQ on a circadian time scale
-
Diernfellner ACR, Querfurth C, Salazar C, Höfer T, Brunner M, (2009) Phosphorylation modulates rapid nucleocytoplasmic shuttling and cytoplasmic accumulation of Neurospora clock protein FRQ on a circadian time scale. Genes Dev 23: 2192-2200.
-
(2009)
Genes Dev
, vol.23
, pp. 2192-2200
-
-
Diernfellner, A.C.R.1
Querfurth, C.2
Salazar, C.3
Höfer, T.4
Brunner, M.5
-
38
-
-
33745145846
-
Transcriptional and post-transcriptional regulation of the circadian clock of cyanobacteria and Neurospora
-
Brunner M, Schafmeier T, (2006) Transcriptional and post-transcriptional regulation of the circadian clock of cyanobacteria and Neurospora. Genes Dev 20: 1061-1074.
-
(2006)
Genes Dev
, vol.20
, pp. 1061-1074
-
-
Brunner, M.1
Schafmeier, T.2
-
39
-
-
0029879678
-
White collar-1, a central regulator of blue light responses in Neurospora, is a zinc finger protein
-
Ballario P, Vittorioso P, Magrelli A, Talora C, Cabibbo A, et al. (1996) White collar-1, a central regulator of blue light responses in Neurospora, is a zinc finger protein. EMBO J 15: 1650-1657.
-
(1996)
EMBO J
, vol.15
, pp. 1650-1657
-
-
Ballario, P.1
Vittorioso, P.2
Magrelli, A.3
Talora, C.4
Cabibbo, A.5
-
40
-
-
0037008508
-
White collar-1, a DNA binding transcription factor and a light sensor
-
He Q, Cheng P, Yang Y, Wang L, Gardner KH, et al. (2002) White collar-1, a DNA binding transcription factor and a light sensor. Science 297: 840-843.
-
(2002)
Science
, vol.297
, pp. 840-843
-
-
He, Q.1
Cheng, P.2
Yang, Y.3
Wang, L.4
Gardner, K.H.5
-
41
-
-
0031006674
-
Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY
-
Garceau NY, Liu Y, Loros JJ, Dunlap JC, (1997) Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY. Cell 89: 469-476.
-
(1997)
Cell
, vol.89
, pp. 469-476
-
-
Garceau, N.Y.1
Liu, Y.2
Loros, J.J.3
Dunlap, J.C.4
-
42
-
-
0034617102
-
Interconnected feedback loops in the Neurospora circadian system
-
Lee K, Loros JJ, Dunlap JC, (2000) Interconnected feedback loops in the Neurospora circadian system. Science 289: 107-110.
-
(2000)
Science
, vol.289
, pp. 107-110
-
-
Lee, K.1
Loros, J.J.2
Dunlap, J.C.3
-
43
-
-
0035863191
-
WC-2 mediates WC-1-FRQ interaction within the PAS protein-linked circadian feedback loop of Neurospora
-
Denault DL, Loros JJ, Dunlap JC, (2001) WC-2 mediates WC-1-FRQ interaction within the PAS protein-linked circadian feedback loop of Neurospora. EMBO J 20: 109-117.
-
(2001)
EMBO J
, vol.20
, pp. 109-117
-
-
Denault, D.L.1
Loros, J.J.2
Dunlap, J.C.3
-
44
-
-
0035083415
-
Circadian clock-specific roles for the light response protein WHITE COLLAR-2
-
Collett MA, Dunlap JC, Loros JJ, (2001) Circadian clock-specific roles for the light response protein WHITE COLLAR-2. Mol Cell Biol 21: 2619-2628.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 2619-2628
-
-
Collett, M.A.1
Dunlap, J.C.2
Loros, J.J.3
-
45
-
-
0029047917
-
Light-induced resetting of a circadian clock is mediated by a rapid increase in frequency transcript
-
Crosthwaite SK, Loros JJ, Dunlap JC, (1995) Light-induced resetting of a circadian clock is mediated by a rapid increase in frequency transcript. Cell 81: 1003-1012.
-
(1995)
Cell
, vol.81
, pp. 1003-1012
-
-
Crosthwaite, S.K.1
Loros, J.J.2
Dunlap, J.C.3
-
46
-
-
0035253866
-
Circadian regulation of the light input pathway in Neurospora crassa
-
Merrow M, Franchi L, Dragovic Z, Gorl M, Johnson J, et al. (2001) Circadian regulation of the light input pathway in Neurospora crassa. EMBO J 20: 307-315.
-
(2001)
EMBO J
, vol.20
, pp. 307-315
-
-
Merrow, M.1
Franchi, L.2
Dragovic, Z.3
Gorl, M.4
Johnson, J.5
-
47
-
-
70149093861
-
The exosome regulates circadian gene expression in a posttranscriptional negative feedback loop
-
Guo J, Cheng P, Yuan H, Liu Y, (2009) The exosome regulates circadian gene expression in a posttranscriptional negative feedback loop. Cell 138: 1236-1246.
-
(2009)
Cell
, vol.138
, pp. 1236-1246
-
-
Guo, J.1
Cheng, P.2
Yuan, H.3
Liu, Y.4
-
48
-
-
27644467009
-
The PAS/LOV protein VIVID supports a rapidly dampened daytime oscillator that facilitates entrainment of the Neurospora circadian clock
-
Elvin M, Loros JJ, Dunlap JC, Heintzen C, (2005) The PAS/LOV protein VIVID supports a rapidly dampened daytime oscillator that facilitates entrainment of the Neurospora circadian clock. Genes Dev 19: 2593-2605.
-
(2005)
Genes Dev
, vol.19
, pp. 2593-2605
-
-
Elvin, M.1
Loros, J.J.2
Dunlap, J.C.3
Heintzen, C.4
-
49
-
-
34547614440
-
The PAS/LOV protein VIVID controls temperature compensation of circadian clock phase and development in Neurospora crassa
-
Hunt SM, Elvin M, Crosthwaite SK, Heintzen C, (2007) The PAS/LOV protein VIVID controls temperature compensation of circadian clock phase and development in Neurospora crassa. Genes Dev 21: 1964-1974.
-
(2007)
Genes Dev
, vol.21
, pp. 1964-1974
-
-
Hunt, S.M.1
Elvin, M.2
Crosthwaite, S.K.3
Heintzen, C.4
-
50
-
-
0032752042
-
Forty years of PRCs-what have we learned?
-
Johnson CH, (1999) Forty years of PRCs-what have we learned? Chronobiol Int 16: 711-743.
-
(1999)
Chronobiol Int
, vol.16
, pp. 711-743
-
-
Johnson, C.H.1
-
51
-
-
0000089999
-
The effects of light on a circadian rhythm of conidiation in Neurospora
-
Sargent ML, Briggs WR, (1967) The effects of light on a circadian rhythm of conidiation in Neurospora. Plant Physiol 42: 1504-1510.
-
(1967)
Plant Physiol
, vol.42
, pp. 1504-1510
-
-
Sargent, M.L.1
Briggs, W.R.2
-
52
-
-
0003885434
-
Studies of the circadian clock of Neurospora crassa: light-induced phase shifting
-
[PhD Thesis]. University of California, Santa Cruz
-
Dharmananda S, (1980) Studies of the circadian clock of Neurospora crassa: light-induced phase shifting. [PhD Thesis]. University of California, Santa Cruz.
-
(1980)
-
-
Dharmananda, S.1
-
53
-
-
0000096719
-
On the Mechanism of Temperature Independence in a Biological Clock
-
Hastings JW, Sweeney BM, (1957) On the Mechanism of Temperature Independence in a Biological Clock. Proc Natl Acad Sci U S A 43: 804-811.
-
(1957)
Proc Natl Acad Sci U S A
, vol.43
, pp. 804-811
-
-
Hastings, J.W.1
Sweeney, B.M.2
-
55
-
-
0003044595
-
Introducing temperature-compensation in any reaction kinetic oscillator model
-
Ruoff P, (1992) Introducing temperature-compensation in any reaction kinetic oscillator model. J Interdiscipl Cycle Res 23: 92-99.
-
(1992)
J Interdiscipl Cycle Res
, vol.23
, pp. 92-99
-
-
Ruoff, P.1
-
56
-
-
33846839325
-
Temperature compensation through systems biology
-
Ruoff P, Zakhartsev M, Westerhoff HV, (2007) Temperature compensation through systems biology. FEBS J 274: 940-950.
-
(2007)
FEBS J
, vol.274
, pp. 940-950
-
-
Ruoff, P.1
Zakhartsev, M.2
Westerhoff, H.V.3
-
57
-
-
33746147001
-
Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro
-
Kageyama H, Nishiwaki T, Nakajima M, Iwasaki H, Oyama T, et al. (2006) Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro. Mol Cell 23: 161-171.
-
(2006)
Mol Cell
, vol.23
, pp. 161-171
-
-
Kageyama, H.1
Nishiwaki, T.2
Nakajima, M.3
Iwasaki, H.4
Oyama, T.5
-
58
-
-
36049042660
-
ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria
-
Terauchi K, Kitayama Y, Nishiwaki T, Miwa K, Murayama Y, et al. (2007) ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria. Proc Natl Acad Sci U S A 104: 16377-16381.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 16377-16381
-
-
Terauchi, K.1
Kitayama, Y.2
Nishiwaki, T.3
Miwa, K.4
Murayama, Y.5
-
59
-
-
0032493875
-
How temperature changes reset a circadian oscillator
-
Liu Y, Merrow M, Loros JJ, Dunlap JC, (1998) How temperature changes reset a circadian oscillator. Science 281: 825.
-
(1998)
Science
, vol.281
, pp. 825
-
-
Liu, Y.1
Merrow, M.2
Loros, J.J.3
Dunlap, J.C.4
-
60
-
-
78751690623
-
Modelling the dual role of Per phosphorylation and its effect on the period and phase of the mammalian circadian clock
-
Leloup J-C, Goldbeter A, (2011) Modelling the dual role of Per phosphorylation and its effect on the period and phase of the mammalian circadian clock. IET Syst Biol 5: 44-49.
-
(2011)
IET Syst Biol
, vol.5
, pp. 44-49
-
-
Leloup, J.-C.1
Goldbeter, A.2
-
61
-
-
77957260103
-
Data assimilation constrains new connections and components in a complex, eukaryotic circadian clock model
-
Pokhilko A, Hodge SK, Stratford K, Knox K, Edwards KD, et al. (2010) Data assimilation constrains new connections and components in a complex, eukaryotic circadian clock model. Mol Syst Biol 6: 416.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 416
-
-
Pokhilko, A.1
Hodge, S.K.2
Stratford, K.3
Knox, K.4
Edwards, K.D.5
-
62
-
-
77952996508
-
Synchronization of circadian oscillation of phosphorylation level of KaiC in vitro
-
Nagai T, Terada TP, Sasai M, (2010) Synchronization of circadian oscillation of phosphorylation level of KaiC in vitro. Biophys J 98: 2469-2477.
-
(2010)
Biophys J
, vol.98
, pp. 2469-2477
-
-
Nagai, T.1
Terada, T.P.2
Sasai, M.3
-
63
-
-
77951228944
-
Functional significance of FRH in regulating the phosphorylation and stability of Neurospora circadian clock protein FRQ
-
Guo J, Cheng P, Liu Y, (2010) Functional significance of FRH in regulating the phosphorylation and stability of Neurospora circadian clock protein FRQ. J Biol Chem 285: 11508-11515.
-
(2010)
J Biol Chem
, vol.285
, pp. 11508-11515
-
-
Guo, J.1
Cheng, P.2
Liu, Y.3
-
64
-
-
70349452319
-
CKIepsilon/delta-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock
-
Isojima Y, Nakajima M, Ukai H, Fujishima H, Yamada RG, et al. (2009) CKIepsilon/delta-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock. Proc Natl Acad Sci U S A 106: 15744-15749.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 15744-15749
-
-
Isojima, Y.1
Nakajima, M.2
Ukai, H.3
Fujishima, H.4
Yamada, R.G.5
-
65
-
-
48249084897
-
A cyanobacterial circadian clock based on the Kai oscillator
-
Kondo T, (2007) A cyanobacterial circadian clock based on the Kai oscillator. Cold Spring Harb Symp Quant Biol 72: 47-55.
-
(2007)
Cold Spring Harb Symp Quant Biol
, vol.72
, pp. 47-55
-
-
Kondo, T.1
-
66
-
-
66249120358
-
Delayed fluorescence as a universal tool for the measurement of circadian rhythms in higher plants
-
Gould PD, Diaz P, Hogben C, Kusakina J, Salem R, et al. (2009) Delayed fluorescence as a universal tool for the measurement of circadian rhythms in higher plants. Plant J 58: 893-901.
-
(2009)
Plant J
, vol.58
, pp. 893-901
-
-
Gould, P.D.1
Diaz, P.2
Hogben, C.3
Kusakina, J.4
Salem, R.5
-
67
-
-
78650894699
-
The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation
-
Salome PA, Weigel D, McClung CR, (2010) The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation. Plant Cell 22: 3650-3661.
-
(2010)
Plant Cell
, vol.22
, pp. 3650-3661
-
-
Salome, P.A.1
Weigel, D.2
McClung, C.R.3
-
68
-
-
0001036896
-
Temperature compensation of circadian periodicity in clock mutants of Neurospora crassa
-
Gardner GF, Feldman JF, (1981) Temperature compensation of circadian periodicity in clock mutants of Neurospora crassa. Plant Physiol 68: 1244-1248.
-
(1981)
Plant Physiol
, vol.68
, pp. 1244-1248
-
-
Gardner, G.F.1
Feldman, J.F.2
-
69
-
-
0037126627
-
A PEST-like element in FREQUENCY determines the length of the circadian period in Neurospora crassa
-
Gorl M, Merrow M, Huttner B, Johnson J, Roenneberg T, et al. (2001) A PEST-like element in FREQUENCY determines the length of the circadian period in Neurospora crassa. EMBO J 20: 7074-7084.
-
(2001)
EMBO J
, vol.20
, pp. 7074-7084
-
-
Gorl, M.1
Merrow, M.2
Huttner, B.3
Johnson, J.4
Roenneberg, T.5
-
70
-
-
27844498688
-
Degradation of the Neurospora circadian clock protein FREQUENCY through the ubiquitin-proteasome pathway
-
He Q, Liu Y, (2005) Degradation of the Neurospora circadian clock protein FREQUENCY through the ubiquitin-proteasome pathway. Biochem Soc Trans 33: 953-956.
-
(2005)
Biochem Soc Trans
, vol.33
, pp. 953-956
-
-
He, Q.1
Liu, Y.2
-
71
-
-
33748640133
-
Lithium leads to an increased FRQ protein stability and to a partial loss of temperature compensation in the Neurospora circadian clock
-
Jolma IW, Falkeid G, Bamerni M, Ruoff P, (2006) Lithium leads to an increased FRQ protein stability and to a partial loss of temperature compensation in the Neurospora circadian clock. J Biol Rhythms 21: 327-334.
-
(2006)
J Biol Rhythms
, vol.21
, pp. 327-334
-
-
Jolma, I.W.1
Falkeid, G.2
Bamerni, M.3
Ruoff, P.4
-
72
-
-
0034602768
-
Phosphorylation of the Neurospora clock protein FREQUENCY determines its degradation rate and strongly influences the period length of the circadian clock
-
Liu Y, Loros J, Dunlap JC, (2000) Phosphorylation of the Neurospora clock protein FREQUENCY determines its degradation rate and strongly influences the period length of the circadian clock. Proc Natl Acad Sci U S A 97: 234-239.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 234-239
-
-
Liu, Y.1
Loros, J.2
Dunlap, J.C.3
-
73
-
-
67349174721
-
Activity of the circadian transcription factor White Collar Complex is modulated by phosphorylation of SP-motifs
-
Sancar G, Sancar C, Brunner M, Schafmeier T, (2009) Activity of the circadian transcription factor White Collar Complex is modulated by phosphorylation of SP-motifs. FEBS Lett 583: 1833-1840.
-
(2009)
FEBS Lett
, vol.583
, pp. 1833-1840
-
-
Sancar, G.1
Sancar, C.2
Brunner, M.3
Schafmeier, T.4
-
75
-
-
67649771757
-
Setting the pace of the Neurospora circadian clock by multiple independent FRQ phosphorylation events
-
Tang CT, Li S, Long C, Cha J, Huang G, et al. (2009) Setting the pace of the Neurospora circadian clock by multiple independent FRQ phosphorylation events. Proc Natl Acad Sci U S A 106: 10722-10727.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 10722-10727
-
-
Tang, C.T.1
Li, S.2
Long, C.3
Cha, J.4
Huang, G.5
-
76
-
-
0025964061
-
Induction of growth arrest by a temperature-sensitive p53 mutant is correlated with increased nuclear localization and decreased stability of the protein
-
Ginsberg D, Michael-Michalovitz D, Ginsberg D, Oren M, (1991) Induction of growth arrest by a temperature-sensitive p53 mutant is correlated with increased nuclear localization and decreased stability of the protein. Mol Cell Biol 11: 582-585.
-
(1991)
Mol Cell Biol
, vol.11
, pp. 582-585
-
-
Ginsberg, D.1
Michael-Michalovitz, D.2
Ginsberg, D.3
Oren, M.4
-
77
-
-
78650608097
-
Temperature controls nuclear import of Tam3 transposase in Antirrhinum
-
Fujino K, Hashida S-n, Ogawa T, Natsume T, Uchiyama T, et al. (2011) Temperature controls nuclear import of Tam3 transposase in Antirrhinum. Plant J 65: 146-155.
-
(2011)
Plant J
, vol.65
, pp. 146-155
-
-
Fujino, K.1
Hashida, S.2
Ogawa, T.3
Natsume, T.4
Uchiyama, T.5
-
78
-
-
0032588947
-
timrit Lengthens circadian period in a temperature-dependent manner through suppression of PERIOD protein cycling and nuclear localization
-
Matsumoto A, Tomioka K, Chiba Y, Tanimura T, (1999) timrit Lengthens circadian period in a temperature-dependent manner through suppression of PERIOD protein cycling and nuclear localization. Mol Cell Biol 19: 4343-4354.
-
(1999)
Mol Cell Biol
, vol.19
, pp. 4343-4354
-
-
Matsumoto, A.1
Tomioka, K.2
Chiba, Y.3
Tanimura, T.4
-
79
-
-
79953168091
-
Regulation of the activity and cellular localization of the circadian clock protein FRQ
-
Cha J, Yuan H, Liu Y, (2011) Regulation of the activity and cellular localization of the circadian clock protein FRQ. J Biol Chem 286: 11469-11478.
-
(2011)
J Biol Chem
, vol.286
, pp. 11469-11478
-
-
Cha, J.1
Yuan, H.2
Liu, Y.3
-
80
-
-
23444439817
-
Using process diagrams for the graphical representation of biological networks
-
Kitano H, Funahashi A, Matsuoka Y, Oda K, (2005) Using process diagrams for the graphical representation of biological networks. Nat Biotechnol 12: 961-966.
-
(2005)
Nat Biotechnol
, vol.12
, pp. 961-966
-
-
Kitano, H.1
Funahashi, A.2
Matsuoka, Y.3
Oda, K.4
-
81
-
-
47949099328
-
CellDesigner 3.5: A versatile modeling tool for biochemical networks
-
Funahashi A, Matsuoka Y, Jouraku A, Morohashi M, Kikuchi N, et al. (2008) CellDesigner 3.5: A versatile modeling tool for biochemical networks. Proc IEEE Inst Electr Electron Eng 96: 1254-1265.
-
(2008)
Proc IEEE Inst Electr Electron Eng
, vol.96
, pp. 1254-1265
-
-
Funahashi, A.1
Matsuoka, Y.2
Jouraku, A.3
Morohashi, M.4
Kikuchi, N.5
-
82
-
-
9444266171
-
CellDesigner: a process diagram editor for gene-regulatory and biochemical networks
-
Funahashi A, Morohashi M, Kitano H, Tanimura N, (2003) CellDesigner: a process diagram editor for gene-regulatory and biochemical networks. Drug Discov Today Biosilico 1: 159-162.
-
(2003)
Drug Discov Today Biosilico
, vol.1
, pp. 159-162
-
-
Funahashi, A.1
Morohashi, M.2
Kitano, H.3
Tanimura, N.4
-
83
-
-
77956995235
-
Genetic and microbial research techniques for Neurospora crassa
-
Davis RH, de Serres FJ, (1970) Genetic and microbial research techniques for Neurospora crassa. Methods Enzymol 17: 79-143.
-
(1970)
Methods Enzymol
, vol.17
, pp. 79-143
-
-
Davis, R.H.1
de Serres, F.J.2
-
84
-
-
0033947304
-
Automated recordings of bioluminescence with special reference to the analysis of circadian rhythms
-
Roenneberg T, Taylor W, (2000) Automated recordings of bioluminescence with special reference to the analysis of circadian rhythms. Methods Enzymol 305: 104-119.
-
(2000)
Methods Enzymol
, vol.305
, pp. 104-119
-
-
Roenneberg, T.1
Taylor, W.2
|