-
1
-
-
36749010218
-
The age of crosstalk: Phosphorylation, ubiquitination, and beyond
-
Hunter, T. The age of crosstalk: phosphorylation, ubiquitination, and beyond Mol. Cell 2007, 28 (5) 730-8
-
(2007)
Mol. Cell
, vol.28
, Issue.5
, pp. 730-738
-
-
Hunter, T.1
-
2
-
-
4344574540
-
Large-scale characterization of HeLa cell nuclear phosphoproteins
-
Beausoleil, S. A.; Jedrychowski, M.; Schwartz, D.; Elias, J. E.; Villen, J.; Li, J.; Cohn, M. A.; Cantley, L. C.; Gygi, S. P. Large-scale characterization of HeLa cell nuclear phosphoproteins Proc. Natl. Acad. Sci. U.S.A. 2004, 101 (33) 12130-5
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, Issue.33
, pp. 12130-12135
-
-
Beausoleil, S.A.1
Jedrychowski, M.2
Schwartz, D.3
Elias, J.E.4
Villen, J.5
Li, J.6
Cohn, M.A.7
Cantley, L.C.8
Gygi, S.P.9
-
3
-
-
78650466243
-
A tissue-specific atlas of mouse protein phosphorylation and expression
-
Huttlin, E. L.; Jedrychowski, M. P.; Elias, J. E.; Goswami, T.; Rad, R.; Beausoleil, S. A.; Villen, J.; Haas, W.; Sowa, M. E.; Gygi, S. P. A tissue-specific atlas of mouse protein phosphorylation and expression Cell 2010, 143 (7) 1174-89
-
(2010)
Cell
, vol.143
, Issue.7
, pp. 1174-1189
-
-
Huttlin, E.L.1
Jedrychowski, M.P.2
Elias, J.E.3
Goswami, T.4
Rad, R.5
Beausoleil, S.A.6
Villen, J.7
Haas, W.8
Sowa, M.E.9
Gygi, S.P.10
-
4
-
-
0033611663
-
The Croonian Lecture 1998. Identification of a protein kinase cascade of major importance in insulin signal transduction
-
Cohen, P. The Croonian Lecture 1998. Identification of a protein kinase cascade of major importance in insulin signal transduction Philo.s Trans. R. Soc., B 1999, 354 (1382) 485-95
-
(1999)
Philo.s Trans. R. Soc., B
, vol.354
, Issue.1382
, pp. 485-495
-
-
Cohen, P.1
-
5
-
-
77951644400
-
Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis
-
Olsen, J. V.; Vermeulen, M.; Santamaria, A.; Kumar, C.; Miller, M. L.; Jensen, L. J.; Gnad, F.; Cox, J.; Jensen, T. S.; Nigg, E. A.; Brunak, S.; Mann, M. Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis Sci. Signaling 2010, 3 (104) ra3
-
(2010)
Sci. Signaling
, vol.3
, Issue.104
, pp. 3
-
-
Olsen, J.V.1
Vermeulen, M.2
Santamaria, A.3
Kumar, C.4
Miller, M.L.5
Jensen, L.J.6
Gnad, F.7
Cox, J.8
Jensen, T.S.9
Nigg, E.A.10
Brunak, S.11
Mann, M.12
-
6
-
-
78651277460
-
PHOSIDA 2011: The posttranslational modification database
-
Gnad, F.; Gunawardena, J.; Mann, M. PHOSIDA 2011: the posttranslational modification database Nucleic Acids Res. 2011, 39 (Database issue) D253-60
-
(2011)
Nucleic Acids Res.
, vol.39
, Issue.DATABASE ISSUE
, pp. 253-260
-
-
Gnad, F.1
Gunawardena, J.2
Mann, M.3
-
7
-
-
30744432140
-
Quantitative phosphoproteomic analysis of the tumor necrosis factor pathway
-
Cantin, G. T.; Venable, J. D.; Cociorva, D.; Yates, J. R., 3rd Quantitative phosphoproteomic analysis of the tumor necrosis factor pathway J. Proteome Res. 2006, 5 (1) 127-34
-
(2006)
J. Proteome Res.
, vol.5
, Issue.1
, pp. 127-134
-
-
Cantin, G.T.1
Venable, J.D.2
Cociorva, D.3
Yates III, J.R.4
-
8
-
-
58149385852
-
Quantitative analysis of brain nuclear phosphoproteins identifies developmentally regulated phosphorylation events
-
Liao, L.; McClatchy, D. B.; Park, S. K.; Xu, T.; Lu, B.; Yates, J. R., 3rd Quantitative analysis of brain nuclear phosphoproteins identifies developmentally regulated phosphorylation events J. Proteome Res. 2008, 7 (11) 4743-55
-
(2008)
J. Proteome Res.
, vol.7
, Issue.11
, pp. 4743-4755
-
-
Liao, L.1
McClatchy, D.B.2
Park, S.K.3
Xu, T.4
Lu, B.5
Yates III, J.R.6
-
9
-
-
40649117198
-
Dissection of the insulin signaling pathway via quantitative phosphoproteomics
-
Kruger, M.; Kratchmarova, I.; Blagoev, B.; Tseng, Y. H.; Kahn, C. R.; Mann, M. Dissection of the insulin signaling pathway via quantitative phosphoproteomics Proc. Natl. Acad. Sci. U.S.A. 2008, 105 (7) 2451-6
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, Issue.7
, pp. 2451-2456
-
-
Kruger, M.1
Kratchmarova, I.2
Blagoev, B.3
Tseng, Y.H.4
Kahn, C.R.5
Mann, M.6
-
10
-
-
76649110554
-
In-depth qualitative and quantitative profiling of tyrosine phosphorylation using a combination of phosphopeptide immunoaffinity purification and stable isotope dimethyl labeling
-
Boersema, P. J.; Foong, L. Y.; Ding, V. M.; Lemeer, S.; van Breukelen, B.; Philp, R.; Boekhorst, J.; Snel, B.; den Hertog, J.; Choo, A. B.; Heck, A. J. In-depth qualitative and quantitative profiling of tyrosine phosphorylation using a combination of phosphopeptide immunoaffinity purification and stable isotope dimethyl labeling Mol. Cell. Proteomics 2010, 9 (1) 84-99
-
(2010)
Mol. Cell. Proteomics
, vol.9
, Issue.1
, pp. 84-99
-
-
Boersema, P.J.1
Foong, L.Y.2
Ding, V.M.3
Lemeer, S.4
Van Breukelen, B.5
Philp, R.6
Boekhorst, J.7
Snel, B.8
Den Hertog, J.9
Choo, A.B.10
Heck, A.J.11
-
11
-
-
79251648840
-
Differential proteomic analysis of mammalian tissues using SILAM
-
McClatchy, D. B.; Liao, L.; Park, S. K.; Xu, T.; Lu, B.; Yates Iii, J. R. Differential proteomic analysis of mammalian tissues using SILAM PLoS One 2011, 6 (1) e16039
-
(2011)
PLoS One
, vol.6
, Issue.1
, pp. 16039
-
-
McClatchy, D.B.1
Liao, L.2
Park, S.K.3
Xu, T.4
Lu, B.5
Yates III, J.R.6
-
12
-
-
79958696694
-
The mTOR-regulated phosphoproteome reveals a mechanism of mTORC1-mediated inhibition of growth factor signaling
-
Hsu, P. P.; Kang, S. A.; Rameseder, J.; Zhang, Y.; Ottina, K. A.; Lim, D.; Peterson, T. R.; Choi, Y.; Gray, N. S.; Yaffe, M. B.; Marto, J. A.; Sabatini, D. M. The mTOR-regulated phosphoproteome reveals a mechanism of mTORC1-mediated inhibition of growth factor signaling Science 2011, 332 (6035) 1317-22
-
(2011)
Science
, vol.332
, Issue.6035
, pp. 1317-1322
-
-
Hsu, P.P.1
Kang, S.A.2
Rameseder, J.3
Zhang, Y.4
Ottina, K.A.5
Lim, D.6
Peterson, T.R.7
Choi, Y.8
Gray, N.S.9
Yaffe, M.B.10
Marto, J.A.11
Sabatini, D.M.12
-
13
-
-
77949848665
-
A chemical and phosphoproteomic characterization of dasatinib action in lung cancer
-
Li, J.; Rix, U.; Fang, B.; Bai, Y.; Edwards, A.; Colinge, J.; Bennett, K. L.; Gao, J.; Song, L.; Eschrich, S.; Superti-Furga, G.; Koomen, J.; Haura, E. B. A chemical and phosphoproteomic characterization of dasatinib action in lung cancer Nat. Chem. Biol. 2010, 6 (4) 291-9
-
(2010)
Nat. Chem. Biol.
, vol.6
, Issue.4
, pp. 291-299
-
-
Li, J.1
Rix, U.2
Fang, B.3
Bai, Y.4
Edwards, A.5
Colinge, J.6
Bennett, K.L.7
Gao, J.8
Song, L.9
Eschrich, S.10
Superti-Furga, G.11
Koomen, J.12
Haura, E.B.13
-
14
-
-
79958696336
-
Phosphoproteomic analysis identifies Grb10 as an mTORC1 substrate that negatively regulates insulin signaling
-
Yu, Y.; Yoon, S. O.; Poulogiannis, G.; Yang, Q.; Ma, X. M.; Villen, J.; Kubica, N.; Hoffman, G. R.; Cantley, L. C.; Gygi, S. P.; Blenis, J. Phosphoproteomic analysis identifies Grb10 as an mTORC1 substrate that negatively regulates insulin signaling Science 2011, 332 (6035) 1322-6
-
(2011)
Science
, vol.332
, Issue.6035
, pp. 1322-1326
-
-
Yu, Y.1
Yoon, S.O.2
Poulogiannis, G.3
Yang, Q.4
Ma, X.M.5
Villen, J.6
Kubica, N.7
Hoffman, G.R.8
Cantley, L.C.9
Gygi, S.P.10
Blenis, J.11
-
15
-
-
79957540957
-
Phosphoproteomics identifies oncogenic Ras signaling targets and their involvement in lung adenocarcinomas
-
Sudhir, P. R.; Hsu, C. L.; Wang, M. J.; Wang, Y. T.; Chen, Y. J.; Sung, T. Y.; Hsu, W. L.; Yang, U. C.; Chen, J. Y. Phosphoproteomics identifies oncogenic Ras signaling targets and their involvement in lung adenocarcinomas PLoS One 2011, 6 (5) e20199
-
(2011)
PLoS One
, vol.6
, Issue.5
, pp. 20199
-
-
Sudhir, P.R.1
Hsu, C.L.2
Wang, M.J.3
Wang, Y.T.4
Chen, Y.J.5
Sung, T.Y.6
Hsu, W.L.7
Yang, U.C.8
Chen, J.Y.9
-
16
-
-
79961014854
-
Large-scale phosphosite quantification in tissues by a spike-in SILAC method
-
Monetti, M.; Nagaraj, N.; Sharma, K.; Mann, M. Large-scale phosphosite quantification in tissues by a spike-in SILAC method Nat. Methods 2011, 8 (8) 655-8
-
(2011)
Nat. Methods
, vol.8
, Issue.8
, pp. 655-658
-
-
Monetti, M.1
Nagaraj, N.2
Sharma, K.3
Mann, M.4
-
17
-
-
79961013401
-
Correct interpretation of comprehensive phosphorylation dynamics requires normalization by protein expression changes
-
10.1074/mcp.M111.009654
-
Wu, R.; Dephoure, N.; Haas, W.; Huttlin, E. L.; Zhai, B.; Sowa, M. E.; Gygi, S. P. Correct interpretation of comprehensive phosphorylation dynamics requires normalization by protein expression changes Mol. Cell. Proteomics 2011, 10.1074/mcp.M111.009654
-
(2011)
Mol. Cell. Proteomics
-
-
Wu, R.1
Dephoure, N.2
Haas, W.3
Huttlin, E.L.4
Zhai, B.5
Sowa, M.E.6
Gygi, S.P.7
-
18
-
-
79960979428
-
A large-scale method to measure absolute protein phosphorylation stoichiometries
-
Wu, R.; Haas, W.; Dephoure, N.; Huttlin, E. L.; Zhai, B.; Sowa, M. E.; Gygi, S. P. A large-scale method to measure absolute protein phosphorylation stoichiometries Nat. Methods 2011, 8 (8) 677-83
-
(2011)
Nat. Methods
, vol.8
, Issue.8
, pp. 677-683
-
-
Wu, R.1
Haas, W.2
Dephoure, N.3
Huttlin, E.L.4
Zhai, B.5
Sowa, M.E.6
Gygi, S.P.7
-
19
-
-
43849091451
-
Hydrophilic interaction chromatography reduces the complexity of the phosphoproteome and improves global phosphopeptide isolation and detection
-
McNulty, D. E.; Annan, R. S. Hydrophilic interaction chromatography reduces the complexity of the phosphoproteome and improves global phosphopeptide isolation and detection Mol. Cell. Proteomics 2008, 7 (5) 971-80
-
(2008)
Mol. Cell. Proteomics
, vol.7
, Issue.5
, pp. 971-980
-
-
McNulty, D.E.1
Annan, R.S.2
-
20
-
-
84984933087
-
The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry
-
Villen, J.; Gygi, S. P. The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry Nat. Protoc. 2008, 3 (10) 1630-8
-
(2008)
Nat. Protoc.
, vol.3
, Issue.10
, pp. 1630-1638
-
-
Villen, J.1
Gygi, S.P.2
-
21
-
-
0035106351
-
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
-
Washburn, M. P.; Wolters, D.; Yates, J. R., 3rd Large-scale analysis of the yeast proteome by multidimensional protein identification technology Nat. Biotechnol. 2001, 19 (3) 242-7
-
(2001)
Nat. Biotechnol.
, vol.19
, Issue.3
, pp. 242-247
-
-
Washburn, M.P.1
Wolters, D.2
Yates III, J.R.3
-
22
-
-
0035582244
-
An automated multidimensional protein identification technology for shotgun proteomics
-
Wolters, D. A.; Washburn, M. P.; Yates, J. R., III An automated multidimensional protein identification technology for shotgun proteomics Anal. Chem. 2001, 73 (23) 5683-5690
-
(2001)
Anal. Chem.
, vol.73
, Issue.23
, pp. 5683-5690
-
-
Wolters, D.A.1
Washburn, M.P.2
Yates III, J.R.3
-
23
-
-
80054711609
-
Microscale phosphoproteome analysis of 10,000 cells from human cancer cell lines
-
Masuda, T.; Sugiyama, N.; Tomita, M.; Ishihama, Y. Microscale phosphoproteome analysis of 10,000 cells from human cancer cell lines Anal. Chem. 2011, 83 (20) 7698-703
-
(2011)
Anal. Chem.
, vol.83
, Issue.20
, pp. 7698-7703
-
-
Masuda, T.1
Sugiyama, N.2
Tomita, M.3
Ishihama, Y.4
-
24
-
-
34347216365
-
Optimizing TiO2-based phosphopeptide enrichment for automated multidimensional liquid chromatography coupled to tandem mass spectrometry
-
Cantin, G. T.; Shock, T. R.; Park, S. K.; Madhani, H. D.; Yates, J. R., 3rd Optimizing TiO2-based phosphopeptide enrichment for automated multidimensional liquid chromatography coupled to tandem mass spectrometry Anal. Chem. 2007, 79 (12) 4666-73
-
(2007)
Anal. Chem.
, vol.79
, Issue.12
, pp. 4666-4673
-
-
Cantin, G.T.1
Shock, T.R.2
Park, S.K.3
Madhani, H.D.4
Yates III, J.R.5
-
25
-
-
47749097929
-
Phosphorylation by casein kinase 1 regulates tonicity-induced osmotic response element-binding protein/tonicity enhancer-binding protein nucleocytoplasmic trafficking
-
Xu, S.; Wong, C. C.; Tong, E. H.; Chung, S. S.; Yates, J. R., 3rd; Yin, Y.; Ko, B. C. Phosphorylation by casein kinase 1 regulates tonicity-induced osmotic response element-binding protein/tonicity enhancer-binding protein nucleocytoplasmic trafficking J. Biol. Chem. 2008, 283 (25) 17624-34
-
(2008)
J. Biol. Chem.
, vol.283
, Issue.25
, pp. 17624-17634
-
-
Xu, S.1
Wong, C.C.2
Tong, E.H.3
Chung, S.S.4
Yates III, J.R.5
Yin, Y.6
Ko, B.C.7
-
26
-
-
67649683032
-
Budding yeast centrosome duplication requires stabilization of Spc29 via Mps1-mediated phosphorylation
-
Holinger, E. P.; Old, W. M.; Giddings, T. H., Jr.; Wong, C.; Yates, J. R., 3rd; Winey, M. Budding yeast centrosome duplication requires stabilization of Spc29 via Mps1-mediated phosphorylation J. Biol. Chem. 2009, 284 (19) 12949-55
-
(2009)
J. Biol. Chem.
, vol.284
, Issue.19
, pp. 12949-12955
-
-
Holinger, E.P.1
Old, W.M.2
Giddings Jr., T.H.3
Wong, C.4
Yates III, J.R.5
Winey, M.6
-
27
-
-
0001565428
-
Crystal structure of hydroxyapatite
-
Kay, M. I.; Young, R. A.; Posner, A. S. Crystal structure of hydroxyapatite Nature 1964, 204, 1050-2
-
(1964)
Nature
, vol.204
, pp. 1050-1052
-
-
Kay, M.I.1
Young, R.A.2
Posner, A.S.3
-
28
-
-
0029146115
-
Osteopontin and related phosphorylated sialoproteins: Effects on mineralization
-
Boskey, A. L. Osteopontin and related phosphorylated sialoproteins: effects on mineralization Ann. N.Y. Acad. Sci. 1995, 760, 249-56
-
(1995)
Ann. N.Y. Acad. Sci.
, vol.760
, pp. 249-256
-
-
Boskey, A.L.1
-
29
-
-
71549141982
-
Protein chromatography on hydroxyapatite columns
-
Cummings, L. J.; Snyder, M. A.; Brisack, K. Protein chromatography on hydroxyapatite columns Methods Enzymol. 2009, 463, 387-404
-
(2009)
Methods Enzymol.
, vol.463
, pp. 387-404
-
-
Cummings, L.J.1
Snyder, M.A.2
Brisack, K.3
-
30
-
-
34047253349
-
Current methods for phosphoprotein isolation and enrichment
-
Schmidt, S. R.; Schweikart, F.; Andersson, M. E. Current methods for phosphoprotein isolation and enrichment J. Chromatogr., B 2007, 849 (1-2) 154-62
-
(2007)
J. Chromatogr., B
, vol.849
, Issue.1-2
, pp. 154-162
-
-
Schmidt, S.R.1
Schweikart, F.2
Andersson, M.E.3
-
31
-
-
0022861882
-
A new spherical hydroxyapatite for high performance liquid chromatography of proteins
-
Kadoya, T.; Ebihara, M.; Ishikawa, T.; Isobe, T.; Kobayashi, A.; Kuwahara, H.; Ogawa, T.; Okuyama, T.; Sumita, M. A new spherical hydroxyapatite for high performance liquid chromatography of proteins J. Liq. Chromatogr. 1986, 9, 3543-3557
-
(1986)
J. Liq. Chromatogr.
, vol.9
, pp. 3543-3557
-
-
Kadoya, T.1
Ebihara, M.2
Ishikawa, T.3
Isobe, T.4
Kobayashi, A.5
Kuwahara, H.6
Ogawa, T.7
Okuyama, T.8
Sumita, M.9
-
32
-
-
71549131402
-
-
Patent US5360544
-
Ichitsuka, T.; Kawamura, K.; Ogawa, T.; Sumita, M.; Yokoo, A., Packing material for liquid chromatography, Patent US5360544, 1992.
-
(1992)
Packing Material for Liquid Chromatography
-
-
Ichitsuka, T.1
Kawamura, K.2
Ogawa, T.3
Sumita, M.4
Yokoo, A.5
-
33
-
-
76649129012
-
Hydroxyapatite affinity chromatography for the highly selective enrichment of mono- and multi-phosphorylated peptides in phosphoproteome analysis
-
Mamone, G.; Picariello, G.; Ferranti, P.; Addeo, F. Hydroxyapatite affinity chromatography for the highly selective enrichment of mono- and multi-phosphorylated peptides in phosphoproteome analysis Proteomics 2010, 10 (3) 380-93
-
(2010)
Proteomics
, vol.10
, Issue.3
, pp. 380-393
-
-
Mamone, G.1
Picariello, G.2
Ferranti, P.3
Addeo, F.4
-
34
-
-
77957320034
-
Control of selectivity via nanochemistry: Monolithic capillary column containing hydroxyapatite nanoparticles for separation of proteins and enrichment of phosphopeptides
-
Krenkova, J.; Lacher, N. A.; Svec, F. Control of selectivity via nanochemistry: monolithic capillary column containing hydroxyapatite nanoparticles for separation of proteins and enrichment of phosphopeptides Anal. Chem. 2010, 82 (19) 8335-41
-
(2010)
Anal. Chem.
, vol.82
, Issue.19
, pp. 8335-8341
-
-
Krenkova, J.1
Lacher, N.A.2
Svec, F.3
-
35
-
-
34249335982
-
15N metabolic labeling of mammalian tissue with slow protein turnover
-
McClatchy, D. B.; Dong, M. Q.; Wu, C. C.; Venable, J. D.; Yates, J. R., 3rd 15N metabolic labeling of mammalian tissue with slow protein turnover J. Proteome Res. 2007, 6 (5) 2005-10
-
(2007)
J. Proteome Res.
, vol.6
, Issue.5
, pp. 2005-2010
-
-
McClatchy, D.B.1
Dong, M.Q.2
Wu, C.C.3
Venable, J.D.4
Yates III, J.R.5
-
36
-
-
4444346217
-
Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis
-
Wu, C. C.; MacCoss, M. J.; Howell, K. E.; Matthews, D. E.; Yates, J. R., 3rd Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis Anal. Chem. 2004, 76 (17) 4951-9
-
(2004)
Anal. Chem.
, vol.76
, Issue.17
, pp. 4951-4959
-
-
Wu, C.C.1
MacCoss, M.J.2
Howell, K.E.3
Matthews, D.E.4
Yates III, J.R.5
-
37
-
-
28544433959
-
Measurement of the isotope enrichment of stable isotope-labeled proteins using high-resolution mass spectra of peptides
-
MacCoss, M. J.; Wu, C. C.; Matthews, D. E.; Yates, J. R., 3rd Measurement of the isotope enrichment of stable isotope-labeled proteins using high-resolution mass spectra of peptides Anal. Chem. 2005, 77 (23) 7646-53
-
(2005)
Anal. Chem.
, vol.77
, Issue.23
, pp. 7646-7653
-
-
MacCoss, M.J.1
Wu, C.C.2
Matthews, D.E.3
Yates III, J.R.4
-
38
-
-
4544280727
-
MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications
-
McDonald, W. H.; Tabb, D. L.; Sadygov, R. G.; MacCoss, M. J.; Venable, J.; Graumann, J.; Johnson, J. R.; Cociorva, D.; Yates, J. R., 3rd MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications Rapid Commun. Mass Spectrom. 2004, 18 (18) 2162-8
-
(2004)
Rapid Commun. Mass Spectrom.
, vol.18
, Issue.18
, pp. 2162-2168
-
-
McDonald, W.H.1
Tabb, D.L.2
Sadygov, R.G.3
MacCoss, M.J.4
Venable, J.5
Graumann, J.6
Johnson, J.R.7
Cociorva, D.8
Yates III, J.R.9
-
39
-
-
35648943746
-
ProLuCID, a fast and sensitive tandem mass spectra-based protein identification program
-
Xu, T.; Venable, J. D.; Park, S. K.; Cociorva, D.; Lu, B.; Liao, L.; Wohlschlegel, J.; Hewel, J.; Yates, J. R., 3rd ProLuCID, a fast and sensitive tandem mass spectra-based protein identification program Mol. Cell. Proteomics 2006, 5 (10) S174
-
(2006)
Mol. Cell. Proteomics
, vol.5
, Issue.10
, pp. 174
-
-
Xu, T.1
Venable, J.D.2
Park, S.K.3
Cociorva, D.4
Lu, B.5
Liao, L.6
Wohlschlegel, J.7
Hewel, J.8
Yates III, J.R.9
-
40
-
-
43349089502
-
Validation of tandem mass spectrometry database search results using DTASelect
-
Wiley: New York, Chapter 13, Unit 13 4
-
Cociorva, D.; Tabb, D. L.; Yates, J. R., Validation of tandem mass spectrometry database search results using DTASelect. In Current Protocols in Bioinformatics; Wiley: New York, 2007; Chapter 13, Unit 13 4.
-
(2007)
Current Protocols in Bioinformatics
-
-
Cociorva, D.1
Tabb, D.L.2
Yates, J.R.3
-
41
-
-
0036393898
-
DTASelect and Contrast: Tools for assembling and comparing protein identifications from shotgun proteomics
-
Tabb, D. L.; McDonald, W. H.; Yates, J. R., 3rd DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics J. Proteome Res. 2002, 1 (1) 21-6
-
(2002)
J. Proteome Res.
, vol.1
, Issue.1
, pp. 21-26
-
-
Tabb, D.L.1
McDonald, W.H.2
Yates III, J.R.3
-
42
-
-
33749853607
-
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
-
Beausoleil, S. A.; Villen, J.; Gerber, S. A.; Rush, J.; Gygi, S. P. A probability-based approach for high-throughput protein phosphorylation analysis and site localization Nat. Biotechnol. 2006, 24 (10) 1285-92
-
(2006)
Nat. Biotechnol.
, vol.24
, Issue.10
, pp. 1285-1292
-
-
Beausoleil, S.A.1
Villen, J.2
Gerber, S.A.3
Rush, J.4
Gygi, S.P.5
-
43
-
-
33847194634
-
Automatic validation of phosphopeptide identifications from tandem mass spectra
-
Lu, B.; Ruse, C.; Xu, T.; Park, S. K.; Yates, J., 3rd Automatic validation of phosphopeptide identifications from tandem mass spectra Anal. Chem. 2007, 79 (4) 1301-10
-
(2007)
Anal. Chem.
, vol.79
, Issue.4
, pp. 1301-1310
-
-
Lu, B.1
Ruse, C.2
Xu, T.3
Park, S.K.4
Yates III, J.5
-
44
-
-
41549117597
-
A quantitative analysis software tool for mass spectrometry-based proteomics
-
Park, S. K.; Venable, J. D.; Xu, T.; Yates, J. R., 3rd A quantitative analysis software tool for mass spectrometry-based proteomics Nat. Methods 2008, 5 (4) 319-22
-
(2008)
Nat. Methods
, vol.5
, Issue.4
, pp. 319-322
-
-
Park, S.K.1
Venable, J.D.2
Xu, T.3
Yates III, J.R.4
-
45
-
-
44449124267
-
Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis
-
Cantin, G. T.; Yi, W.; Lu, B.; Park, S. K.; Xu, T.; Lee, J. D.; Yates, J. R., 3rd Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis J. Proteome Res. 2008, 7 (3) 1346-51
-
(2008)
J. Proteome Res.
, vol.7
, Issue.3
, pp. 1346-1351
-
-
Cantin, G.T.1
Yi, W.2
Lu, B.3
Park, S.K.4
Xu, T.5
Lee, J.D.6
Yates III, J.R.7
-
46
-
-
77954375657
-
Optimized IMAC-IMAC protocol for phosphopeptide recovery from complex biological samples
-
Ye, J.; Zhang, X.; Young, C.; Zhao, X.; Hao, Q.; Cheng, L.; Jensen, O. N. Optimized IMAC-IMAC protocol for phosphopeptide recovery from complex biological samples J. Proteome Res. 2010, 9 (7) 3561-73
-
(2010)
J. Proteome Res.
, vol.9
, Issue.7
, pp. 3561-3573
-
-
Ye, J.1
Zhang, X.2
Young, C.3
Zhao, X.4
Hao, Q.5
Cheng, L.6
Jensen, O.N.7
-
47
-
-
24944519450
-
Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns
-
Larsen, M. R.; Thingholm, T. E.; Jensen, O. N.; Roepstorff, P.; Jorgensen, T. J. Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns Mol. Cell. Proteomics 2005, 4 (7) 873-86
-
(2005)
Mol. Cell. Proteomics
, vol.4
, Issue.7
, pp. 873-886
-
-
Larsen, M.R.1
Thingholm, T.E.2
Jensen, O.N.3
Roepstorff, P.4
Jorgensen, T.J.5
-
48
-
-
34347403192
-
Phosphopeptide enrichment by aliphatic hydroxy acid-modified metal oxide chromatography for nano-LC-MS/MS in proteomics applications
-
Sugiyama, N.; Masuda, T.; Shinoda, K.; Nakamura, A.; Tomita, M.; Ishihama, Y. Phosphopeptide enrichment by aliphatic hydroxy acid-modified metal oxide chromatography for nano-LC-MS/MS in proteomics applications Mol. Cell. Proteomics 2007, 6 (6) 1103-9
-
(2007)
Mol. Cell. Proteomics
, vol.6
, Issue.6
, pp. 1103-1109
-
-
Sugiyama, N.1
Masuda, T.2
Shinoda, K.3
Nakamura, A.4
Tomita, M.5
Ishihama, Y.6
-
49
-
-
0028218041
-
A selective precipitation purification procedure for multiple phosphoseryl-containing peptides and methods for their identification
-
Reynolds, E. C.; Riley, P. F.; Adamson, N. J. A selective precipitation purification procedure for multiple phosphoseryl-containing peptides and methods for their identification Anal. Biochem. 1994, 217 (2) 277-84
-
(1994)
Anal. Biochem.
, vol.217
, Issue.2
, pp. 277-284
-
-
Reynolds, E.C.1
Riley, P.F.2
Adamson, N.J.3
-
50
-
-
51649095905
-
Phosphoproteomic analysis of human brain by calcium phosphate precipitation and mass spectrometry
-
Xia, Q.; Cheng, D.; Duong, D. M.; Gearing, M.; Lah, J. J.; Levey, A. I.; Peng, J. Phosphoproteomic analysis of human brain by calcium phosphate precipitation and mass spectrometry J. Proteome Res. 2008, 7 (7) 2845-51
-
(2008)
J. Proteome Res.
, vol.7
, Issue.7
, pp. 2845-2851
-
-
Xia, Q.1
Cheng, D.2
Duong, D.M.3
Gearing, M.4
Lah, J.J.5
Levey, A.I.6
Peng, J.7
-
51
-
-
36749031608
-
Highly efficient phosphopeptide enrichment by calcium phosphate precipitation combined with subsequent IMAC enrichment
-
Zhang, X.; Ye, J.; Jensen, O. N.; Roepstorff, P. Highly efficient phosphopeptide enrichment by calcium phosphate precipitation combined with subsequent IMAC enrichment Mol. Cell. Proteomics 2007, 6 (11) 2032-42
-
(2007)
Mol. Cell. Proteomics
, vol.6
, Issue.11
, pp. 2032-2042
-
-
Zhang, X.1
Ye, J.2
Jensen, O.N.3
Roepstorff, P.4
-
52
-
-
52049117223
-
Motif-specific sampling of phosphoproteomes
-
Ruse, C. I.; McClatchy, D. B.; Lu, B.; Cociorva, D.; Motoyama, A.; Park, S. K.; Yates, J. R., 3rd Motif-specific sampling of phosphoproteomes J. Proteome Res. 2008, 7 (5) 2140-50
-
(2008)
J. Proteome Res.
, vol.7
, Issue.5
, pp. 2140-2150
-
-
Ruse, C.I.1
McClatchy, D.B.2
Lu, B.3
Cociorva, D.4
Motoyama, A.5
Park, S.K.6
Yates III, J.R.7
-
53
-
-
84883930346
-
Proteolytic digestion approaches for shotgun proteomics
-
Pawliszyn, J. Elsevier Inc. New York
-
Fonslow, B. R.; Yates, J. R., 3rd Proteolytic digestion approaches for shotgun proteomics. In Comprehensive Sampling and Sample Preparation: Analytical Techniques for Scientists; Pawliszyn, J., Ed.;, Elsevier Inc.: New York, 2012.
-
(2012)
Comprehensive Sampling and Sample Preparation: Analytical Techniques for Scientists
-
-
Fonslow, B.R.1
Yates III, J.R.2
-
54
-
-
0000857494
-
An approach to correlate tandem mass-spectral data of peptides with amino-acid-sequences in a protein database
-
Eng, J. K.; Mccormack, A. L.; Yates, J. R. An approach to correlate tandem mass-spectral data of peptides with amino-acid-sequences in a protein database J. Am. Soc. Mass Spectrom. 1994, 5 (11) 976-89
-
(1994)
J. Am. Soc. Mass Spectrom.
, vol.5
, Issue.11
, pp. 976-989
-
-
Eng, J.K.1
McCormack, A.L.2
Yates, J.R.3
-
55
-
-
3042824849
-
A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry
-
Schroeder, M. J.; Shabanowitz, J.; Schwartz, J. C.; Hunt, D. F.; Coon, J. J. A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry Anal. Chem. 2004, 76 (13) 3590-8
-
(2004)
Anal. Chem.
, vol.76
, Issue.13
, pp. 3590-3598
-
-
Schroeder, M.J.1
Shabanowitz, J.2
Schwartz, J.C.3
Hunt, D.F.4
Coon, J.J.5
-
56
-
-
61849182590
-
Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification
-
Ulintz, P. J.; Yocum, A. K.; Bodenmiller, B.; Aebersold, R.; Andrews, P. C.; Nesvizhskii, A. I. Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification J. Proteome Res. 2009, 8 (2) 887-99
-
(2009)
J. Proteome Res.
, vol.8
, Issue.2
, pp. 887-899
-
-
Ulintz, P.J.1
Yocum, A.K.2
Bodenmiller, B.3
Aebersold, R.4
Andrews, P.C.5
Nesvizhskii, A.I.6
-
57
-
-
77953552285
-
Peptide orientation affects selectivity in ion-exchange chromatography
-
Alpert, A. J.; Petritis, K.; Kangas, L.; Smith, R. D.; Mechtler, K.; Mitulovic, G.; Mohammed, S.; Heck, A. J. Peptide orientation affects selectivity in ion-exchange chromatography Anal. Chem. 2010, 82 (12) 5253-9
-
(2010)
Anal. Chem.
, vol.82
, Issue.12
, pp. 5253-5259
-
-
Alpert, A.J.1
Petritis, K.2
Kangas, L.3
Smith, R.D.4
Mechtler, K.5
Mitulovic, G.6
Mohammed, S.7
Heck, A.J.8
-
58
-
-
33746263848
-
Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples
-
Motoyama, A.; Venable, J. D.; Ruse, C. I.; Yates, J. R., 3rd Automated ultra-high-pressure multidimensional protein identification technology (UHP-MudPIT) for improved peptide identification of proteomic samples Anal. Chem. 2006, 78 (14) 5109-18
-
(2006)
Anal. Chem.
, vol.78
, Issue.14
, pp. 5109-5118
-
-
Motoyama, A.1
Venable, J.D.2
Ruse, C.I.3
Yates III, J.R.4
-
59
-
-
75149144996
-
A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed
-
Olsen, J. V.; Schwartz, J. C.; Griep-Raming, J.; Nielsen, M. L.; Damoc, E.; Denisov, E.; Lange, O.; Remes, P.; Taylor, D.; Splendore, M.; Wouters, E. R.; Senko, M.; Makarov, A.; Mann, M.; Horning, S. A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed Mol. Cell. Proteomics 2009, 8 (12) 2759-69
-
(2009)
Mol. Cell. Proteomics
, vol.8
, Issue.12
, pp. 2759-2769
-
-
Olsen, J.V.1
Schwartz, J.C.2
Griep-Raming, J.3
Nielsen, M.L.4
Damoc, E.5
Denisov, E.6
Lange, O.7
Remes, P.8
Taylor, D.9
Splendore, M.10
Wouters, E.R.11
Senko, M.12
Makarov, A.13
Mann, M.14
Horning, S.15
-
60
-
-
33847616949
-
Reproducible isolation of distinct, overlapping segments of the phosphoproteome
-
Bodenmiller, B.; Mueller, L. N.; Mueller, M.; Domon, B.; Aebersold, R. Reproducible isolation of distinct, overlapping segments of the phosphoproteome Nat. Methods 2007, 4 (3) 231-7
-
(2007)
Nat. Methods
, vol.4
, Issue.3
, pp. 231-237
-
-
Bodenmiller, B.1
Mueller, L.N.2
Mueller, M.3
Domon, B.4
Aebersold, R.5
-
61
-
-
79956146702
-
Classification of protein binding in hydroxyapatite chromatography: Synergistic interactions on the molecular scale
-
Hou, Y.; Morrison, C. J.; Cramer, S. M. Classification of protein binding in hydroxyapatite chromatography: synergistic interactions on the molecular scale Anal. Chem. 2011, 83 (10) 3709-16
-
(2011)
Anal. Chem.
, vol.83
, Issue.10
, pp. 3709-3716
-
-
Hou, Y.1
Morrison, C.J.2
Cramer, S.M.3
-
62
-
-
0025731508
-
Role of acidic residues as substrate determinants for casein kinase i
-
Flotow, H.; Roach, P. J. Role of acidic residues as substrate determinants for casein kinase I J. Biol. Chem. 1991, 266 (6) 3724-7
-
(1991)
J. Biol. Chem.
, vol.266
, Issue.6
, pp. 3724-3727
-
-
Flotow, H.1
Roach, P.J.2
-
63
-
-
0037334895
-
One-thousand-and-one substrates of protein kinase CK2?
-
Meggio, F.; Pinna, L. A. One-thousand-and-one substrates of protein kinase CK2? FASEB J. 2003, 17 (3) 349-68
-
(2003)
FASEB J.
, vol.17
, Issue.3
, pp. 349-368
-
-
Meggio, F.1
Pinna, L.A.2
-
64
-
-
67349211782
-
Extraordinary pleiotropy of protein kinase CK2 revealed by weblogo phosphoproteome analysis
-
Salvi, M.; Sarno, S.; Cesaro, L.; Nakamura, H.; Pinna, L. A. Extraordinary pleiotropy of protein kinase CK2 revealed by weblogo phosphoproteome analysis Biochim. Biophys. Acta 2009, 1793 (5) 847-59
-
(2009)
Biochim. Biophys. Acta
, vol.1793
, Issue.5
, pp. 847-859
-
-
Salvi, M.1
Sarno, S.2
Cesaro, L.3
Nakamura, H.4
Pinna, L.A.5
-
65
-
-
84872864632
-
Protein kinase CK2 in health and disease: Protein kinase CK2: An ugly duckling in the kinome pond
-
Pinna, L. A.; Allende, J. E. Protein kinase CK2 in health and disease: Protein kinase CK2: an ugly duckling in the kinome pond Cell. Mol. Life Sci. 2009, 66 (11-12) 1795-9
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, Issue.11-12
, pp. 1795-1799
-
-
Pinna, L.A.1
Allende, J.E.2
-
66
-
-
70349320107
-
Protein kinase CK2 in health and disease: CK2: A key player in cancer biology
-
Trembley, J. H.; Wang, G.; Unger, G.; Slaton, J.; Ahmed, K. Protein kinase CK2 in health and disease: CK2: a key player in cancer biology Cell. Mol. Life Sci. 2009, 66 (11-12) 1858-67
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, Issue.11-12
, pp. 1858-1867
-
-
Trembley, J.H.1
Wang, G.2
Unger, G.3
Slaton, J.4
Ahmed, K.5
-
67
-
-
49749110451
-
Protein kinase CK2 as a druggable target
-
Sarno, S.; Pinna, L. A. Protein kinase CK2 as a druggable target Mol. Biosyst. 2008, 4 (9) 889-94
-
(2008)
Mol. Biosyst.
, vol.4
, Issue.9
, pp. 889-894
-
-
Sarno, S.1
Pinna, L.A.2
-
68
-
-
70349326247
-
Protein kinase CK2 in health and disease: CK2 and its role in Wnt and NF-kappaB signaling: Linking development and cancer
-
Dominguez, I.; Sonenshein, G. E.; Seldin, D. C. Protein kinase CK2 in health and disease: CK2 and its role in Wnt and NF-kappaB signaling: linking development and cancer Cell. Mol. Life Sci. 2009, 66 (11-12) 1850-7
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, Issue.11-12
, pp. 1850-1857
-
-
Dominguez, I.1
Sonenshein, G.E.2
Seldin, D.C.3
-
69
-
-
70349326246
-
Protein kinase CK2 in health and disease: CK2: The kinase controlling the Hsp90 chaperone machinery
-
Miyata, Y. Protein kinase CK2 in health and disease: CK2: the kinase controlling the Hsp90 chaperone machinery Cell. Mol. Life Sci. 2009, 66 (11-12) 1840-9
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, Issue.11-12
, pp. 1840-1849
-
-
Miyata, Y.1
-
70
-
-
70349186117
-
Protein kinase CK2 in health and disease: From birth to death: The role of protein kinase CK2 in the regulation of cell proliferation and survival
-
St-Denis, N. A.; Litchfield, D. W. Protein kinase CK2 in health and disease: From birth to death: the role of protein kinase CK2 in the regulation of cell proliferation and survival Cell. Mol. Life Sci. 2009, 66 (11-12) 1817-29
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, Issue.11-12
, pp. 1817-1829
-
-
St-Denis, N.A.1
Litchfield, D.W.2
-
71
-
-
77649117952
-
Cooperativity within proximal phosphorylation sites is revealed from large-scale proteomics data
-
Schweiger, R.; Linial, M. Cooperativity within proximal phosphorylation sites is revealed from large-scale proteomics data Biol. Direct 2010, 5, 6
-
(2010)
Biol. Direct
, vol.5
, pp. 6
-
-
Schweiger, R.1
Linial, M.2
-
72
-
-
77951634725
-
Systems-wide proteomic characterization of combinatorial post-translational modification patterns
-
Young, N. L.; Plazas-Mayorca, M. D.; Garcia, B. A. Systems-wide proteomic characterization of combinatorial post-translational modification patterns Expert Rev. Proteomics 2010, 7 (1) 79-92
-
(2010)
Expert Rev. Proteomics
, vol.7
, Issue.1
, pp. 79-92
-
-
Young, N.L.1
Plazas-Mayorca, M.D.2
Garcia, B.A.3
-
73
-
-
37249082641
-
Protein kinase A and casein kinases mediate sequential phosphorylation events in the circadian negative feedback loop
-
Huang, G.; Chen, S.; Li, S.; Cha, J.; Long, C.; Li, L.; He, Q.; Liu, Y. Protein kinase A and casein kinases mediate sequential phosphorylation events in the circadian negative feedback loop Genes Dev. 2007, 21 (24) 3283-95
-
(2007)
Genes Dev.
, vol.21
, Issue.24
, pp. 3283-3295
-
-
Huang, G.1
Chen, S.2
Li, S.3
Cha, J.4
Long, C.5
Li, L.6
He, Q.7
Liu, Y.8
-
74
-
-
53949105870
-
Transcriptome analysis identifies genes with enriched expression in the mouse central extended amygdala
-
Becker, J. A.; Befort, K.; Blad, C.; Filliol, D.; Ghate, A.; Dembele, D.; Thibault, C.; Koch, M.; Muller, J.; Lardenois, A.; Poch, O.; Kieffer, B. L. Transcriptome analysis identifies genes with enriched expression in the mouse central extended amygdala Neuroscience 2008, 156 (4) 950-65
-
(2008)
Neuroscience
, vol.156
, Issue.4
, pp. 950-965
-
-
Becker, J.A.1
Befort, K.2
Blad, C.3
Filliol, D.4
Ghate, A.5
Dembele, D.6
Thibault, C.7
Koch, M.8
Muller, J.9
Lardenois, A.10
Poch, O.11
Kieffer, B.L.12
-
75
-
-
80052967467
-
CREB-mediated alterations in the amygdala transcriptome: Coordinated regulation of immune response genes following cocaine
-
Ecke, L. E.; Cleck, J. N.; White, P.; Schug, J.; Mifflin, L.; Blendy, J. A. CREB-mediated alterations in the amygdala transcriptome: coordinated regulation of immune response genes following cocaine Int. J. Neuropsychopharmacol. 2011, 14 (8) 1111-26
-
(2011)
Int. J. Neuropsychopharmacol.
, vol.14
, Issue.8
, pp. 1111-1126
-
-
Ecke, L.E.1
Cleck, J.N.2
White, P.3
Schug, J.4
Mifflin, L.5
Blendy, J.A.6
-
76
-
-
79955498437
-
A human-mouse conserved sex bias in amygdala gene expression related to circadian clock and energy metabolism
-
Lin, L. C.; Lewis, D. A.; Sibille, E. A human-mouse conserved sex bias in amygdala gene expression related to circadian clock and energy metabolism Mol. Brain 2011, 4, 18
-
(2011)
Mol. Brain
, vol.4
, pp. 18
-
-
Lin, L.C.1
Lewis, D.A.2
Sibille, E.3
-
77
-
-
0034845275
-
Identification of genes expressed in the amygdala during the formation of fear memory
-
Stork, O.; Stork, S.; Pape, H. C.; Obata, K. Identification of genes expressed in the amygdala during the formation of fear memory Learn. Mem. 2001, 8 (4) 209-19
-
(2001)
Learn. Mem.
, vol.8
, Issue.4
, pp. 209-219
-
-
Stork, O.1
Stork, S.2
Pape, H.C.3
Obata, K.4
-
78
-
-
64949179797
-
Corticolimbic transcriptome changes are state-dependent and region-specific in a rodent model of depression and of antidepressant reversal
-
Surget, A.; Wang, Y.; Leman, S.; Ibarguen-Vargas, Y.; Edgar, N.; Griebel, G.; Belzung, C.; Sibille, E. Corticolimbic transcriptome changes are state-dependent and region-specific in a rodent model of depression and of antidepressant reversal Neuropsychopharmacology 2009, 34 (6) 1363-80
-
(2009)
Neuropsychopharmacology
, vol.34
, Issue.6
, pp. 1363-1380
-
-
Surget, A.1
Wang, Y.2
Leman, S.3
Ibarguen-Vargas, Y.4
Edgar, N.5
Griebel, G.6
Belzung, C.7
Sibille, E.8
-
79
-
-
79954427252
-
Changes in brain protein expression are linked to magnesium restriction-induced depression-like behavior
-
Whittle, N.; Li, L.; Chen, W. Q.; Yang, J. W.; Sartori, S. B.; Lubec, G.; Singewald, N. Changes in brain protein expression are linked to magnesium restriction-induced depression-like behavior Amino Acids 2011, 40 (4) 1231-48
-
(2011)
Amino Acids
, vol.40
, Issue.4
, pp. 1231-1248
-
-
Whittle, N.1
Li, L.2
Chen, W.Q.3
Yang, J.W.4
Sartori, S.B.5
Lubec, G.6
Singewald, N.7
-
80
-
-
51749119227
-
Variation in mouse basolateral amygdala volume is associated with differences in stress reactivity and fear learning
-
Yang, R. J.; Mozhui, K.; Karlsson, R. M.; Cameron, H. A.; Williams, R. W.; Holmes, A. Variation in mouse basolateral amygdala volume is associated with differences in stress reactivity and fear learning Neuropsychopharmacology 2008, 33 (11) 2595-604
-
(2008)
Neuropsychopharmacology
, vol.33
, Issue.11
, pp. 2595-2604
-
-
Yang, R.J.1
Mozhui, K.2
Karlsson, R.M.3
Cameron, H.A.4
Williams, R.W.5
Holmes, A.6
-
81
-
-
55949129082
-
Successive and selective release of phosphorylated peptides captured by hydroxy acid-modified metal oxide chromatography
-
Kyono, Y.; Sugiyama, N.; Imami, K.; Tomita, M.; Ishihama, Y. Successive and selective release of phosphorylated peptides captured by hydroxy acid-modified metal oxide chromatography J. Proteome Res. 2008, 7 (10) 4585-93
-
(2008)
J. Proteome Res.
, vol.7
, Issue.10
, pp. 4585-4593
-
-
Kyono, Y.1
Sugiyama, N.2
Imami, K.3
Tomita, M.4
Ishihama, Y.5
-
82
-
-
42649139982
-
SIMAC (sequential elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides
-
Thingholm, T. E.; Jensen, O. N.; Robinson, P. J.; Larsen, M. R. SIMAC (sequential elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides Mol. Cell. Proteomics 2008, 7 (4) 661-71
-
(2008)
Mol. Cell. Proteomics
, vol.7
, Issue.4
, pp. 661-671
-
-
Thingholm, T.E.1
Jensen, O.N.2
Robinson, P.J.3
Larsen, M.R.4
-
83
-
-
54949129419
-
ProteoWizard: Open source software for rapid proteomics tools development
-
Kessner, D.; Chambers, M.; Burke, R.; Agus, D.; Mallick, P. ProteoWizard: open source software for rapid proteomics tools development Bioinformatics 2008, 24 (21) 2534-6
-
(2008)
Bioinformatics
, vol.24
, Issue.21
, pp. 2534-2536
-
-
Kessner, D.1
Chambers, M.2
Burke, R.3
Agus, D.4
Mallick, P.5
-
85
-
-
0004098488
-
-
5 th ed. W.H. Freeman: New York, pp xix, 899, 42, 34, 126
-
Harris, D. C. Quantitative Chemical Analysis, 5 th ed.; W.H. Freeman: New York, 1999; pp xix, 899, 42, 34, 126.
-
(1999)
Quantitative Chemical Analysis
-
-
Harris, D.C.1
-
86
-
-
27944499451
-
An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets
-
Schwartz, D.; Gygi, S. P. An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets Nat. Biotechnol. 2005, 23 (11) 1391-8
-
(2005)
Nat. Biotechnol.
, vol.23
, Issue.11
, pp. 1391-1398
-
-
Schwartz, D.1
Gygi, S.P.2
-
87
-
-
77954565509
-
Brain phosphoproteome obtained by a FASP-based method reveals plasma membrane protein topology
-
Wisniewski, J. R.; Nagaraj, N.; Zougman, A.; Gnad, F.; Man, M. Brain phosphoproteome obtained by a FASP-based method reveals plasma membrane protein topology J. Proteome Res. 2010, 9 (6) 3280-9
-
(2010)
J. Proteome Res.
, vol.9
, Issue.6
, pp. 3280-3289
-
-
Wisniewski, J.R.1
Nagaraj, N.2
Zougman, A.3
Gnad, F.4
Man, M.5
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