-
1
-
-
0035902180
-
Oncogenic kinase signalling
-
Blume-Jensen, P., and Hunter, T. (2001) Oncogenic kinase signalling. Nature 411, 355-365
-
(2001)
Nature
, vol.411
, pp. 355-365
-
-
Blume-Jensen, P.1
Hunter, T.2
-
2
-
-
4444371652
-
Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics
-
Blagoev, B., Ong, S. E., Kratchmarova, I., and Mann, M. (2004) Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics. Nat. Biotechnol. 22, 1139-1145
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 1139-1145
-
-
Blagoev, B.1
Ong, S.E.2
Kratchmarova, I.3
Mann, M.4
-
3
-
-
0037059770
-
Tyrosine phosphorylation mapping of the epidermal growth factor receptor signaling pathway
-
Steen, H., Kuster, B., Fernandez, M., Pandey, A., and Mann, M. (2002) Tyrosine phosphorylation mapping of the epidermal growth factor receptor signaling pathway. J. Biol. Chem. 277, 1031-1039
-
(2002)
J. Biol. Chem
, vol.277
, pp. 1031-1039
-
-
Steen, H.1
Kuster, B.2
Fernandez, M.3
Pandey, A.4
Mann, M.5
-
4
-
-
17844406391
-
Phosphotyrosine signaling networks in epidermal growth factor receptor overexpressing squamous carcinoma cells
-
Thelemann, A., Petti, F., Griffin, G., Iwata, K., Hunt, T., Settinari, T., Fenyo, D., Gibson, N., and Haley, J. D. (2005) Phosphotyrosine signaling networks in epidermal growth factor receptor overexpressing squamous carcinoma cells. Mol. Cell. Proteomics 4, 356-376
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 356-376
-
-
Thelemann, A.1
Petti, F.2
Griffin, G.3
Iwata, K.4
Hunt, T.5
Settinari, T.6
Fenyo, D.7
Gibson, N.8
Haley, J.D.9
-
5
-
-
26844576371
-
Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules
-
Zhang, Y., Wolf-Yadlin, A., Ross, P. L., Pappin, D. J., Rush, J., Lauffenburger, D. A., and White, F. M. (2005) Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. Mol. Cell. Proteomics 4, 1240-1250
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1240-1250
-
-
Zhang, Y.1
Wolf-Yadlin, A.2
Ross, P.L.3
Pappin, D.J.4
Rush, J.5
Lauffenburger, D.A.6
White, F.M.7
-
6
-
-
0034602654
-
Analysis of receptor signaling pathways by mass spectrometry: Identification of Vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors
-
Pandey, A., Podtelejnikov, A. V., Blagoev, B., Bustelo, X. R., Mann, M., and Lodish, H. F. (2000) Analysis of receptor signaling pathways by mass spectrometry: identification of Vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors. Proc. Natl. Acad. Sci. U.S.A. 97, 179-184
-
(2000)
Proc. Natl. Acad. Sci. U.S.A
, vol.97
, pp. 179-184
-
-
Pandey, A.1
Podtelejnikov, A.V.2
Blagoev, B.3
Bustelo, X.R.4
Mann, M.5
Lodish, H.F.6
-
7
-
-
26844486610
-
Phosphoproteome analysis of HeLa cells using stable isotope labeling with amino acids in cell culture (SILAC)
-
Amanchy, R., Kalume, D. E., Iwahori, A., Zhong, J., and Pandey, A. (2005) Phosphoproteome analysis of HeLa cells using stable isotope labeling with amino acids in cell culture (SILAC). J. Proteome Res. 4, 1661-1671
-
(2005)
J. Proteome Res
, vol.4
, pp. 1661-1671
-
-
Amanchy, R.1
Kalume, D.E.2
Iwahori, A.3
Zhong, J.4
Pandey, A.5
-
8
-
-
0141784138
-
Signaling initiated by overexpression of the fibroblast growth factor receptor-1 investigated by mass spectrometry
-
Hinsby, A. M., Olsen, J. V., Bennett, K. L., and Mann, M. (2003) Signaling initiated by overexpression of the fibroblast growth factor receptor-1 investigated by mass spectrometry. Mol. Cell. Proteomics 2, 29-36
-
(2003)
Mol. Cell. Proteomics
, vol.2
, pp. 29-36
-
-
Hinsby, A.M.1
Olsen, J.V.2
Bennett, K.L.3
Mann, M.4
-
9
-
-
38649119730
-
Signaling networks assembled by oncogenic EGFR and c-Met
-
Guo, A., Villén, J., Kornhauser, J., Lee, K. A., Stokes, M. P., Rikova, K., Possemato, A., Nardone, J., Innocenti, G., Wetzel, R., Wang, Y., MacNeill, J., Mitchell, J., Gygi, S. P., Rush, J., Polakiewicz, R. D., and Comb, M. J. (2008) Signaling networks assembled by oncogenic EGFR and c-Met. Proc. Natl. Acad. Sci. U.S.A. 105, 692-697
-
(2008)
Proc. Natl. Acad. Sci. U.S.A
, vol.105
, pp. 692-697
-
-
Guo, A.1
Villén, J.2
Kornhauser, J.3
Lee, K.A.4
Stokes, M.P.5
Rikova, K.6
Possemato, A.7
Nardone, J.8
Innocenti, G.9
Wetzel, R.10
Wang, Y.11
MacNeill, J.12
Mitchell, J.13
Gygi, S.P.14
Rush, J.15
Polakiewicz, R.D.16
Comb, M.J.17
-
10
-
-
36849065315
-
Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer
-
Rikova, K., Guo, A., Zeng, Q., Possemato, A., Yu, J., Haack, H., Nardone, J., Lee, K., Reeves, C., Li, Y., Hu, Y., Tan, Z., Stokes, M., Sullivan, L., Mitchell, J., Wetzel, R., Macneill, J., Ren, J. M., Yuan, J., Bakalarski, C. E., Villen, J., Kornhauser, J. M., Smith, B., Li, D., Zhou, X., Gygi, S. P., Gu, T. L., Polakiewicz, R. D., Rush, J., and Comb, M. J. (2007) Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer. Cell 131, 1190-1203
-
(2007)
Cell
, vol.131
, pp. 1190-1203
-
-
Rikova, K.1
Guo, A.2
Zeng, Q.3
Possemato, A.4
Yu, J.5
Haack, H.6
Nardone, J.7
Lee, K.8
Reeves, C.9
Li, Y.10
Hu, Y.11
Tan, Z.12
Stokes, M.13
Sullivan, L.14
Mitchell, J.15
Wetzel, R.16
Macneill, J.17
Ren, J.M.18
Yuan, J.19
Bakalarski, C.E.20
Villen, J.21
Kornhauser, J.M.22
Smith, B.23
Li, D.24
Zhou, X.25
Gygi, S.P.26
Gu, T.L.27
Polakiewicz, R.D.28
Rush, J.29
Comb, M.J.30
more..
-
11
-
-
38649139336
-
Large-scale identification and evolution indexing of tyrosine phosphorylation sites from murine brain
-
Ballif, B. A., Carey, G. R., Sunyaev, S. R., and Gygi, S. P. (2008) Large-scale identification and evolution indexing of tyrosine phosphorylation sites from murine brain. J. Proteome Res. 7, 311-318
-
(2008)
J. Proteome Res
, vol.7
, pp. 311-318
-
-
Ballif, B.A.1
Carey, G.R.2
Sunyaev, S.R.3
Gygi, S.P.4
-
12
-
-
34250722602
-
Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks
-
Wolf-Yadlin, A., Hautaniemi, S., Lauffenburger, D. A., and White, F. M. (2007) Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks. Proc. Natl. Acad. Sci. U.S.A. 104, 5860-5865
-
(2007)
Proc. Natl. Acad. Sci. U.S.A
, vol.104
, pp. 5860-5865
-
-
Wolf-Yadlin, A.1
Hautaniemi, S.2
Lauffenburger, D.A.3
White, F.M.4
-
13
-
-
33750696663
-
Effects of HER2 overexpression on cell signaling networks governing proliferation and migration
-
Wolf-Yadlin, A., Kumar, N., Zhang, Y., Hautaniemi, S., Zaman, M., Kim, H. D., Grantcharova, V., Lauffenburger, D. A., and White, F. M. (2006) Effects of HER2 overexpression on cell signaling networks governing proliferation and migration. Mol. Syst. Biol. 2, 54
-
(2006)
Mol. Syst. Biol
, vol.2
, pp. 54
-
-
Wolf-Yadlin, A.1
Kumar, N.2
Zhang, Y.3
Hautaniemi, S.4
Zaman, M.5
Kim, H.D.6
Grantcharova, V.7
Lauffenburger, D.A.8
White, F.M.9
-
14
-
-
21144445429
-
Phosphotyrosine proteomic study of interferon alpha signaling pathway using a combination of immunoprecipitation and immobilized metal affinity chromatography
-
Zheng, H., Hu, P., Quinn, D. F., and Wang, Y. K. (2005) Phosphotyrosine proteomic study of interferon alpha signaling pathway using a combination of immunoprecipitation and immobilized metal affinity chromatography. Mol. Cell. Proteomics 4, 721-730
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 721-730
-
-
Zheng, H.1
Hu, P.2
Quinn, D.F.3
Wang, Y.K.4
-
15
-
-
44449117048
-
Tandem immunoprecipitation of phosphotyrosine-mass spectrometry (TIPY-MS) indicates C19ORF19 becomes tyrosine-phosphorylated and associated with activated epidermal growth factor receptor
-
Tong, J., Taylor, P., Jovceva, E., St-Germain, J. R., Jin, L. L., Nikolic, A., Gu, X., Li, Z. H., Trudel, S., and Moran, M. F. (2008) Tandem immunoprecipitation of phosphotyrosine-mass spectrometry (TIPY-MS) indicates C19ORF19 becomes tyrosine-phosphorylated and associated with activated epidermal growth factor receptor. J. Proteome Res. 7, 1067-1077
-
(2008)
J. Proteome Res
, vol.7
, pp. 1067-1077
-
-
Tong, J.1
Taylor, P.2
Jovceva, E.3
St-Germain, J.R.4
Jin, L.L.5
Nikolic, A.6
Gu, X.7
Li, Z.H.8
Trudel, S.9
Moran, M.F.10
-
16
-
-
21144458164
-
Immunoaffinity profiling of tyrosine phosphorylation in cancer cells
-
Rush, J., Moritz, A., Lee, K. A., Guo, A., Goss, V. L., Spek, E. J., Zhang, H., Zha, X. M., Polakiewicz, R. D., and Comb, M. J. (2005) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. Nat. Biotechnol. 23, 94-101
-
(2005)
Nat. Biotechnol
, vol.23
, pp. 94-101
-
-
Rush, J.1
Moritz, A.2
Lee, K.A.3
Guo, A.4
Goss, V.L.5
Spek, E.J.6
Zhang, H.7
Zha, X.M.8
Polakiewicz, R.D.9
Comb, M.J.10
-
17
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
Ong, S. E., Blagoev, B., Kratchmarova, I., Kristensen, D. B., Steen, H., Pandey, A., and Mann, M. (2002) Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell. Proteomics 1, 376-386
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
Kristensen, D.B.4
Steen, H.5
Pandey, A.6
Mann, M.7
-
18
-
-
19944432197
-
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
Ross, P. L., Huang, Y. N., Marchese, J. N., Williamson, B., Parker, K., Hattan, S., Khainovski, N., Pillai, S., Dey, S., Daniels, S., Purkayastha, S., Juhasz, P., Martin, S., Bartlet-Jones, M., He, F., Jacobson, A., and Pappin, D. J. (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 3, 1154-1169
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 1154-1169
-
-
Ross, P.L.1
Huang, Y.N.2
Marchese, J.N.3
Williamson, B.4
Parker, K.5
Hattan, S.6
Khainovski, N.7
Pillai, S.8
Dey, S.9
Daniels, S.10
Purkayastha, S.11
Juhasz, P.12
Martin, S.13
Bartlet-Jones, M.14
He, F.15
Jacobson, A.16
Pappin, D.J.17
-
19
-
-
0348014635
-
Stable-isotope dimethyl labeling for quantitative proteomics
-
Hsu, J. L., Huang, S. Y., Chow, N. H., and Chen, S. H. (2003) Stable-isotope dimethyl labeling for quantitative proteomics. Anal. Chem. 75, 6843-6852
-
(2003)
Anal. Chem
, vol.75
, pp. 6843-6852
-
-
Hsu, J.L.1
Huang, S.Y.2
Chow, N.H.3
Chen, S.H.4
-
20
-
-
55849093586
-
Triplex protein quantification based on stable isotope labeling by peptide dimethylation applied to cell and tissue lysates
-
Boersema, P. J., Aye, T. T., van Veen, T. A., Heck, A. J., and Mohammed, S. (2008) Triplex protein quantification based on stable isotope labeling by peptide dimethylation applied to cell and tissue lysates. Proteomics 8, 4624-4632
-
(2008)
Proteomics
, vol.8
, pp. 4624-4632
-
-
Boersema, P.J.1
Aye, T.T.2
van Veen, T.A.3
Heck, A.J.4
Mohammed, S.5
-
21
-
-
64749108158
-
Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics
-
Boersema, P. J., Raijmakers, R., Lemeer, S., Mohammed, S., and Heck, A. J. (2009) Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics. Nat. Protoc. 4, 484-494
-
(2009)
Nat. Protoc
, vol.4
, pp. 484-494
-
-
Boersema, P.J.1
Raijmakers, R.2
Lemeer, S.3
Mohammed, S.4
Heck, A.J.5
-
22
-
-
34748916981
-
Quantitative mass spectrometry in proteomics: A critical review
-
Bantscheff, M., Schirle, M., Sweetman, G., Rick, J., and Kuster, B. (2007) Quantitative mass spectrometry in proteomics: a critical review. Anal. Bioanal. Chem. 389, 1017-1031
-
(2007)
Anal. Bioanal. Chem
, vol.389
, pp. 1017-1031
-
-
Bantscheff, M.1
Schirle, M.2
Sweetman, G.3
Rick, J.4
Kuster, B.5
-
23
-
-
49949087278
-
Comparative phosphoproteomics of zebrafish Fyn/Yes morpholino knockdown embryos
-
Lemeer, S., Jopling, C., Gouw, J., Mohammed, S., Heck, A. J., Slijper, M., and den Hertog, J. (2008) Comparative phosphoproteomics of zebrafish Fyn/Yes morpholino knockdown embryos. Mol. Cell. Proteomics 7, 2176-2187
-
(2008)
Mol. Cell. Proteomics
, vol.7
, pp. 2176-2187
-
-
Lemeer, S.1
Jopling, C.2
Gouw, J.3
Mohammed, S.4
Heck, A.J.5
Slijper, M.6
den Hertog, J.7
-
24
-
-
52649181646
-
Automated online sequential isotope labeling for protein quantitation applied to proteasome tissue-specific diversity
-
Raijmakers, R., Berkers, C. R., de Jong, A., Ovaa, H., Heck, A. J., and Mohammed, S. (2008) Automated online sequential isotope labeling for protein quantitation applied to proteasome tissue-specific diversity. Mol. Cell. Proteomics 7, 1755-1762
-
(2008)
Mol. Cell. Proteomics
, vol.7
, pp. 1755-1762
-
-
Raijmakers, R.1
Berkers, C.R.2
de Jong, A.3
Ovaa, H.4
Heck, A.J.5
Mohammed, S.6
-
25
-
-
33750456519
-
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks
-
Olsen, J. V., Blagoev, B., Gnad, F., Macek, B., Kumar, C., Mortensen, P., and Mann, M. (2006) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 127, 635-648
-
(2006)
Cell
, vol.127
, pp. 635-648
-
-
Olsen, J.V.1
Blagoev, B.2
Gnad, F.3
Macek, B.4
Kumar, C.5
Mortensen, P.6
Mann, M.7
-
26
-
-
65649154049
-
StatQuant: A post quantification analysis toolbox for improving quantitative mass spectrometry
-
van Breukelen, B., van den Toorn, H. W., Drugan, M. M., and Heck, A. J. (2009) StatQuant: A post quantification analysis toolbox for improving quantitative mass spectrometry. Bioinformatics 25, 1472-1473
-
(2009)
Bioinformatics
, vol.25
, pp. 1472-1473
-
-
van Breukelen, B.1
van den Toorn, H.W.2
Drugan, M.M.3
Heck, A.J.4
-
27
-
-
38649083118
-
Assigning significance to peptides identified by tandem mass spectrometry using decoy databases
-
Käll, L., Storey, J. D., MacCoss, M. J., and Noble, W. S. (2008) Assigning significance to peptides identified by tandem mass spectrometry using decoy databases. J. Proteome Res. 7, 29-34
-
(2008)
J. Proteome Res
, vol.7
, pp. 29-34
-
-
Käll, L.1
Storey, J.D.2
MacCoss, M.J.3
Noble, W.S.4
-
28
-
-
38549092088
-
Phospho. ELM: A database of phosphorylation sites update 2008
-
Diella, F., Gould, C. M., Chica, C., Via, A., and Gibson, T. J. (2008) Phospho. ELM: a database of phosphorylation sites update 2008. Nucleic Acids Res. 36, D240-D244
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Diella, F.1
Gould, C.M.2
Chica, C.3
Via, A.4
Gibson, T.J.5
-
29
-
-
27944499451
-
An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets
-
Schwartz, D., and Gygi, S. P. (2005) An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets. Nat. Biotechnol. 23, 1391-1398
-
(2005)
Nat. Biotechnol
, vol.23
, pp. 1391-1398
-
-
Schwartz, D.1
Gygi, S.P.2
-
30
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks, G. E., Hon, G., Chandonia, J. M., and Brenner, S. E. (2004) WebLogo: a sequence logo generator. Genome Res. 14, 1188-1190
-
(2004)
Genome Res
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
31
-
-
33947103658
-
A curated compendium of phosphorylation motifs
-
Amanchy, R., Periaswamy, B., Mathivanan, S., Reddy, R., Tattikota, S. G., and Pandey, A. (2007) A curated compendium of phosphorylation motifs. Nat. Biotechnol. 25, 285-286
-
(2007)
Nat. Biotechnol
, vol.25
, pp. 285-286
-
-
Amanchy, R.1
Periaswamy, B.2
Mathivanan, S.3
Reddy, R.4
Tattikota, S.G.5
Pandey, A.6
-
32
-
-
34250743173
-
Systematic discovery of in vivo phosphorylation networks
-
Linding, R., Jensen, L. J., Ostheimer, G. J., van Vugt, M. A., Jørgensen, C., Miron, I. M., Diella, F., Colwill, K., Taylor, L., Elder, K., Metalnikov, P., Nguyen, V., Pasculescu, A., Jin, J., Park, J. G., Samson, L. D., Woodgett, J. R., Russell, R. B., Bork, P., Yaffe, M. B., and Pawson, T. (2007) Systematic discovery of in vivo phosphorylation networks. Cell 129, 1415-1426
-
(2007)
Cell
, vol.129
, pp. 1415-1426
-
-
Linding, R.1
Jensen, L.J.2
Ostheimer, G.J.3
van Vugt, M.A.4
Jørgensen, C.5
Miron, I.M.6
Diella, F.7
Colwill, K.8
Taylor, L.9
Elder, K.10
Metalnikov, P.11
Nguyen, V.12
Pasculescu, A.13
Jin, J.14
Park, J.G.15
Samson, L.D.16
Woodgett, J.R.17
Russell, R.B.18
Bork, P.19
Yaffe, M.B.20
Pawson, T.21
more..
-
33
-
-
38549109487
-
NetworKIN: A resource for exploring cellular phosphorylation networks
-
Linding, R., Jensen, L. J., Pasculescu, A., Olhovsky, M., Colwill, K., Bork, P., Yaffe, M. B., and Pawson, T. (2008) NetworKIN: a resource for exploring cellular phosphorylation networks. Nucleic Acids Res. 36, D695-D699
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Linding, R.1
Jensen, L.J.2
Pasculescu, A.3
Olhovsky, M.4
Colwill, K.5
Bork, P.6
Yaffe, M.B.7
Pawson, T.8
-
34
-
-
0034069495
-
Gene Ontology: Tool for the unification of biology
-
Ashburner, M., Ball, C. A., Blake, J. A., Botstein, D., Butler, H., Cherry, J. M., Davis, A. P., Dolinski, K., Dwight, S. S., Eppig, J. T., Harris, M. A., Hill, D. P., Issel-Tarver, L., Kasarskis, A., Lewis, S., Matese, J. C., Richardson, J. E., Ringwald, M., Rubin, G. M., and Sherlock, G. (2000) Gene Ontology: tool for the unification of biology. Nat. Genet. 25, 25-29
-
(2000)
Nat. Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
35
-
-
0030925920
-
Pfam: A comprehensive database of protein domain families based on seed alignments
-
Sonnhammer, E. L., Eddy, S. R., and Durbin, R. (1997) Pfam: a comprehensive database of protein domain families based on seed alignments. Proteins 28, 405-420
-
(1997)
Proteins
, vol.28
, pp. 405-420
-
-
Sonnhammer, E.L.1
Eddy, S.R.2
Durbin, R.3
-
36
-
-
54549123613
-
Comparative phosphoproteomics reveals evolutionary and functional conservation of phosphorylation across eukaryotes
-
Boekhorst, J., van Breukelen, B., Heck, A. J., and Snel, B. (2008) Comparative phosphoproteomics reveals evolutionary and functional conservation of phosphorylation across eukaryotes. Genome Biol. 9, R144
-
(2008)
Genome Biol
, vol.9
-
-
Boekhorst, J.1
van Breukelen, B.2
Heck, A.J.3
Snel, B.4
-
37
-
-
2942598149
-
Phosphosite: A bioinformatics resource dedicated to physiological protein phosphorylation
-
Hornbeck, P. V., Chabra, I., Kornhauser, J. M., Skrzypek, E., and Zhang, B. (2004) Phosphosite: a bioinformatics resource dedicated to physiological protein phosphorylation. Proteomics 4, 1551-1561
-
(2004)
Proteomics
, vol.4
, pp. 1551-1561
-
-
Hornbeck, P.V.1
Chabra, I.2
Kornhauser, J.M.3
Skrzypek, E.4
Zhang, B.5
-
38
-
-
0036605185
-
Analysis of protein phosphorylation using mass spectrometry: Deciphering the phosphoproteome
-
Mann, M., Ong, S. E., Grønborg, M., Steen, H., Jensen, O. N., and Pandey, A. (2002) Analysis of protein phosphorylation using mass spectrometry: deciphering the phosphoproteome. Trends Biotechnol. 20, 261-268
-
(2002)
Trends Biotechnol
, vol.20
, pp. 261-268
-
-
Mann, M.1
Ong, S.E.2
Grønborg, M.3
Steen, H.4
Jensen, O.N.5
Pandey, A.6
-
39
-
-
20344363684
-
Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation
-
Kratchmarova, I., Blagoev, B., Haack-Sorensen, M., Kassem, M., and Mann, M. (2005) Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation. Science 308, 1472-1477
-
(2005)
Science
, vol.308
, pp. 1472-1477
-
-
Kratchmarova, I.1
Blagoev, B.2
Haack-Sorensen, M.3
Kassem, M.4
Mann, M.5
-
40
-
-
0031022433
-
Mechanism of inhibition of protein-tyrosine phosphatases by vanadate and pervanadate
-
Huyer, G., Liu, S., Kelly, J., Moffat, J., Payette, P., Kennedy, B., Tsaprailis, G., Gresser, M. J., and Ramachandran, C. (1997) Mechanism of inhibition of protein-tyrosine phosphatases by vanadate and pervanadate. J. Biol. Chem. 272, 843-851
-
(1997)
J. Biol. Chem
, vol.272
, pp. 843-851
-
-
Huyer, G.1
Liu, S.2
Kelly, J.3
Moffat, J.4
Payette, P.5
Kennedy, B.6
Tsaprailis, G.7
Gresser, M.J.8
Ramachandran, C.9
-
41
-
-
4544291080
-
Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database
-
Nühse, T. S., Stensballe, A., Jensen, O. N., and Peck, S. C. (2004) Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database. Plant Cell 16, 2394-2405
-
(2004)
Plant Cell
, vol.16
, pp. 2394-2405
-
-
Nühse, T.S.1
Stensballe, A.2
Jensen, O.N.3
Peck, S.C.4
-
42
-
-
55849103180
-
Quantitative proteomics and phosphoproteomics reveal novel insights into complexity and dynamics of the EGFR signaling network
-
Morandell, S., Stasyk, T., Skvortsov, S., Ascher, S., and Huber, L. A. (2008) Quantitative proteomics and phosphoproteomics reveal novel insights into complexity and dynamics of the EGFR signaling network. Proteomics 8, 4383-4401
-
(2008)
Proteomics
, vol.8
, pp. 4383-4401
-
-
Morandell, S.1
Stasyk, T.2
Skvortsov, S.3
Ascher, S.4
Huber, L.A.5
-
43
-
-
34547881522
-
Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma
-
Huang, P. H., Mukasa, A., Bonavia, R., Flynn, R. A., Brewer, Z. E., Cavenee, W. K., Furnari, F. B., and White, F. M. (2007) Quantitative analysis of EGFRvIII cellular signaling networks reveals a combinatorial therapeutic strategy for glioblastoma. Proc. Natl. Acad. Sci. U.S.A. 104, 12867-12872
-
(2007)
Proc. Natl. Acad. Sci. U.S.A
, vol.104
, pp. 12867-12872
-
-
Huang, P.H.1
Mukasa, A.2
Bonavia, R.3
Flynn, R.A.4
Brewer, Z.E.5
Cavenee, W.K.6
Furnari, F.B.7
White, F.M.8
-
44
-
-
0037145061
-
Ligand-induced, receptor-mediated dimerization and activation of EGF receptor
-
Schlessinger, J. (2002) Ligand-induced, receptor-mediated dimerization and activation of EGF receptor. Cell 110, 669-672
-
(2002)
Cell
, vol.110
, pp. 669-672
-
-
Schlessinger, J.1
-
45
-
-
33746905531
-
Phosphotyrosine interactome of the ErbB-receptor kinase family
-
Schulze, W. X., Deng, L., and Mann, M. (2005) Phosphotyrosine interactome of the ErbB-receptor kinase family. Mol. Syst. Biol. 1, 2005.0008
-
(2005)
Mol. Syst. Biol
, vol.1
, pp. 0008
-
-
Schulze, W.X.1
Deng, L.2
Mann, M.3
-
46
-
-
0035958912
-
The Src homology 2 domain containing inositol 5-phosphatase SHIP2 is recruited to the epidermal growth factor (EGF) receptor and dephosphorylates phosphatidylinositol 3,4,5-trisphosphate in EGF-stimulated COS-7 cells
-
Pesesse, X., Dewaste, V., De Smedt, F., Laffargue, M., Giuriato, S., Moreau, C., Payrastre, B., and Erneux, C. (2001) The Src homology 2 domain containing inositol 5-phosphatase SHIP2 is recruited to the epidermal growth factor (EGF) receptor and dephosphorylates phosphatidylinositol 3,4,5-trisphosphate in EGF-stimulated COS-7 cells. J. Biol. Chem. 276, 28348-28355
-
(2001)
J. Biol. Chem
, vol.276
, pp. 28348-28355
-
-
Pesesse, X.1
Dewaste, V.2
De Smedt, F.3
Laffargue, M.4
Giuriato, S.5
Moreau, C.6
Payrastre, B.7
Erneux, C.8
-
47
-
-
16844383228
-
SH2-containing 5′-inositol phosphatase, SHIP2, regulates cytoskeleton organization and ligand-dependent down-regulation of the epidermal growth factor receptor
-
Prasad, N. K., and Decker, S. J. (2005) SH2-containing 5′-inositol phosphatase, SHIP2, regulates cytoskeleton organization and ligand-dependent down-regulation of the epidermal growth factor receptor. J. Biol. Chem. 280, 13129-13136
-
(2005)
J. Biol. Chem
, vol.280
, pp. 13129-13136
-
-
Prasad, N.K.1
Decker, S.J.2
-
48
-
-
0030656447
-
Tyrosine phosphorylation of the EGF receptor by the kinase Jak2 is induced by growth hormone
-
Yamauchi, T., Ueki, K., Tobe, K., Tamemoto, H., Sekine, N., Wada, M., Honjo, M., Takahashi, M., Takahashi, T., Hirai, H., Tushima, T., Akanuma, Y., Fujita, T., Komuro, I., Yazaki, Y., and Kadowaki, T. (1997) Tyrosine phosphorylation of the EGF receptor by the kinase Jak2 is induced by growth hormone. Nature 390, 91-96
-
(1997)
Nature
, vol.390
, pp. 91-96
-
-
Yamauchi, T.1
Ueki, K.2
Tobe, K.3
Tamemoto, H.4
Sekine, N.5
Wada, M.6
Honjo, M.7
Takahashi, M.8
Takahashi, T.9
Hirai, H.10
Tushima, T.11
Akanuma, Y.12
Fujita, T.13
Komuro, I.14
Yazaki, Y.15
Kadowaki, T.16
-
49
-
-
0037183974
-
Epidermal growth factor and transforming growth factor alpha mimic the effects of insulin in human fat cells and augment downstream signaling in insulin resistance
-
Gogg, S., and Smith, U. (2002) Epidermal growth factor and transforming growth factor alpha mimic the effects of insulin in human fat cells and augment downstream signaling in insulin resistance. J. Biol. Chem. 277, 36045-36051
-
(2002)
J. Biol. Chem
, vol.277
, pp. 36045-36051
-
-
Gogg, S.1
Smith, U.2
-
50
-
-
55249083335
-
Identification of c-Src tyrosine kinase substrates using mass spectrometry and peptide microarrays
-
Amanchy, R., Zhong, J., Molina, H., Chaerkady, R., Iwahori, A., Kalume, D. E., Grønborg, M., Joore, J., Cope, L., and Pandey, A. (2008) Identification of c-Src tyrosine kinase substrates using mass spectrometry and peptide microarrays. J. Proteome Res. 7, 3900-3910
-
(2008)
J. Proteome Res
, vol.7
, pp. 3900-3910
-
-
Amanchy, R.1
Zhong, J.2
Molina, H.3
Chaerkady, R.4
Iwahori, A.5
Kalume, D.E.6
Grønborg, M.7
Joore, J.8
Cope, L.9
Pandey, A.10
-
51
-
-
65549140324
-
Quantitative phosphoproteomics reveals a cluster of tyrosine kinases that mediates Src invasive activity in advanced colon carcinoma cells
-
Leroy, C., Fialin, C., Sirvent, A., Simon, V., Urbach, S., Poncet, J., Robert, B., Jouin, P., and Roche, S. (2009) Quantitative phosphoproteomics reveals a cluster of tyrosine kinases that mediates Src invasive activity in advanced colon carcinoma cells. Cancer Res. 69, 2279-2286
-
(2009)
Cancer Res
, vol.69
, pp. 2279-2286
-
-
Leroy, C.1
Fialin, C.2
Sirvent, A.3
Simon, V.4
Urbach, S.5
Poncet, J.6
Robert, B.7
Jouin, P.8
Roche, S.9
-
52
-
-
53049108920
-
Global impact of oncogenic Src on a phosphotyrosine proteome
-
Luo, W., Slebos, R. J., Hill, S., Li, M., Brábek, J., Amanchy, R., Chaerkady, R., Pandey, A., Ham, A. J., and Hanks, S. K. (2008) Global impact of oncogenic Src on a phosphotyrosine proteome. J. Proteome Res. 7, 3447-3460
-
(2008)
J. Proteome Res
, vol.7
, pp. 3447-3460
-
-
Luo, W.1
Slebos, R.J.2
Hill, S.3
Li, M.4
Brábek, J.5
Amanchy, R.6
Chaerkady, R.7
Pandey, A.8
Ham, A.J.9
Hanks, S.K.10
-
53
-
-
0041468477
-
Cortactin tyrosine phosphorylation requires Rac1 activity and association with the cortical actin cytoskeleton
-
Head, J. A., Jiang, D., Li, M., Zorn, L. J., Schaefer, E. M., Parsons, J. T., and Weed, S. A. (2003) Cortactin tyrosine phosphorylation requires Rac1 activity and association with the cortical actin cytoskeleton. Mol. Biol. Cell 14, 3216-3229
-
(2003)
Mol. Biol. Cell
, vol.14
, pp. 3216-3229
-
-
Head, J.A.1
Jiang, D.2
Li, M.3
Zorn, L.J.4
Schaefer, E.M.5
Parsons, J.T.6
Weed, S.A.7
-
54
-
-
79958696268
-
-
Nieto-Pelegrin, E., and Martinez-Quiles, N. (2009) Distinct phosphorylation requirements regulate cortactin activation by TirEPEC and its binding to N-WASP. Cell Commun. Signal. 7, 11
-
Nieto-Pelegrin, E., and Martinez-Quiles, N. (2009) Distinct phosphorylation requirements regulate cortactin activation by TirEPEC and its binding to N-WASP. Cell Commun. Signal. 7, 11
-
-
-
-
55
-
-
2942594602
-
Erk/Src phosphorylation of cortactin acts as a switch on-switch off mechanism that controls its ability to activate N-WASP
-
Martinez-Quiles, N., Ho, H. Y., Kirschner, M. W., Ramesh, N., and Geha, R. S. (2004) Erk/Src phosphorylation of cortactin acts as a switch on-switch off mechanism that controls its ability to activate N-WASP. Mol. Cell. Biol. 24, 5269-5280
-
(2004)
Mol. Cell. Biol
, vol.24
, pp. 5269-5280
-
-
Martinez-Quiles, N.1
Ho, H.Y.2
Kirschner, M.W.3
Ramesh, N.4
Geha, R.S.5
|