Histone acetyltransferase 1: More than just an enzyme?

Biochimica et Biophysica Acta - Gene Regulatory Mechanisms

Volumn 1819, Issue 3-4, 2012, Pages 256-263

  Parthun, Mark R ^a  

^a OHIO STATE UNIVERSITY   (United States)

Author keywords

Chromatin assembly; HAT1; HAT2; Histone acetylation; Histone chaperone; NASP

Indexed keywords

CHAPERONE; HISTONE ACETYLTRANSFERASE; HISTONE ACETYLTRANSFERASE 1; LYSINE; UNCLASSIFIED DRUG;

ACETYLATION; ARTICLE; CHROMATIN; CHROMATIN ASSEMBLY AND DISASSEMBLY; ENZYME MODIFICATION; ENZYME STRUCTURE; HISTONE ACETYLATION; HUMAN; MOLECULAR DYNAMICS; NONHUMAN; PRIORITY JOURNAL; PROTEIN FUNCTION;

ACETYLATION; ANIMALS; CHROMATIN ASSEMBLY AND DISASSEMBLY; HISTONE ACETYLTRANSFERASES; HISTONES; HUMANS; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY;

EID: 84857123708     PISSN: 18749399     EISSN: 18764320     Source Type: Journal    
DOI: 10.1016/j.bbagrm.2011.07.006     Document Type: Article

References (131)

1. Brownell J.E., Allis C.D. Special HATs for special occasions: linking histone acetylation to chromatin assembly and gene activation. Curr. Opin. Genet. Dev. 1996, 6:176-184.
2. Ruiz-Carillo A., Wangh L.J., Allfry V. Processing of newly synthesized histone molecules. Science 1975, 190:117-128.
3. Louie A.J., Candido E.P., Dixon G.H. Enzymatic modifications and their possible roles in regulating the binding of basic proteins to DNA and in controlling chromosomal structure. Cold Spring Harb. Symp. Quant. Biol. 1974, 38:803-819.
4. Jackson V., Shires A., Tanphaichitr N., Chalkley R. Modifications to histones immediately after synthesis. J. Mol. Biol. 1976, 104:471-483.
5. Benson L.J., Gu Y., Yakovleva T., Tong K., Barrows C., Strack C.L., Cook R.G., Mizzen C.A., Annunziato A.T. Modifications of H3 and H4 during chromatin replication, nucleosome assembly, and histone exchange. J. Biol. Chem. 2006, 281:9287-9296.
6. Chicoine L.G., Schulman I.G., Richman R., Cook R.G., Allis C.D. Nonrandom utilization of acetylation sites in histones isolated from Tetrahymena. Evidence for functionally distinct H4 acetylation sites. J. Biol. Chem. 1986, 261:1071-1076.
7. Sobel R.E., Cook R.G., Perry C.A., Annunziato A.T., Allis C.D. Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4. Proc. Natl. Acad. Sci. U.S.A. 1995, 92:1237-1241.
8. Polo S.E., Roche D., Almouzni G. New histone incorporation marks sites of UV repair in human cells. Cell 2006, 127:481-493.
9. Kuo M.H., Brownell J.E., Sobel R.E., Ranalli T.A., Cook R.G., Edmondson D.G., Roth S.Y., Allis C.D. Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines. Nature 1996, 383:269-272.
10. Adkins M.W., Carson J.J., English C.M., Ramey C.J., Tyler J.K. The histone chaperone anti-silencing function 1 stimulates the acetylation of newly synthesized histone H3 in S-phase. J. Biol. Chem. 2007, 282:1334-1340.
11. Loyola A., Bonaldi T., Roche D., Imhof A., Almouzni G. PTMs on H3 variants before chromatin assembly potentiate their final epigenetic state. Mol. Cell 2006, 24:309-316.
12. Cousens L.S., Alberts B.M. Accessibility of newly synthesized chromatin to histone acetylase. J. Biol. Chem. 1982, 257:3945-3949.
13. Annunziato A.T., Seale R.L. Histone deacetylation is required for the maturation of newly replicated chromatin. J. Biol. Chem. 1983, 258:12675-12684.
14. Xu F., Zhang K., Grunstein M. Acetylation in histone H3 globular domain regulates gene expression in yeast. Cell 2005, 121:375-385.
15. Ozdemir A., Spicuglia S., Lasonder E., Vermeulen M., Campsteijn C., Stunnenberg H.G., Logie C. Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae. J. Biol. Chem. 2005, 280:25949-25952.
16. Masumoto H., Hawke D., Kobayashi R., Verreault A. A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response. Nature 2005, 436:294-298.
17. Shimko J.C., North J.A., Bruns A.N., Poirier M.G., Ottesen J.J. Preparation of fully synthetic histone h3 reveals that acetyl-lysine 56 facilitates protein binding within nucleosomes. J. Mol. Biol. 2011, 408:187-204.
18. Maas N.L., Miller K.M., DeFazio L.G., Toczyski D.P. Cell cycle and checkpoint regulation of histone H3 K56 acetylation by Hst3 and Hst4. Mol. Cell 2006, 23:109-119.
19. Celic I., Masumoto H., Griffith W.P., Meluh P., Cotter R.J., Boeke J.D., Verreault A. The sirtuins hst3 and Hst4p preserve genome integrity by controlling histone h3 lysine 56 deacetylation. Curr. Biol. 2006, 16:1280-1289.
20. Miller A., Yang B., Foster T., Kirchmaier A.L. Proliferating cell nuclear antigen and ASF1 modulate silent chromatin in Saccharomyces cerevisiae via lysine 56 on histone H3. Genetics 2008, 179:793-809.
21. Tsubota T., Berndsen C.E., Erkmann J.A., Smith C.L., Yang L., Freitas M.A., Denu J.M., Kaufman P.D. Histone H3-K56 acetylation is catalyzed by histone chaperone-dependent complexes. Mol. Cell 2007, 25:703-712.
22. Han J., Zhou H., Horazdovsky B., Zhang K., Xu R.M., Zhang Z. Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication. Science 2007, 315:653-655.
23. Driscoll R., Hudson A., Jackson S.P. Yeast Rtt109 promotes genome stability by acetylating histone H3 on lysine 56. Science 2007, 315:649-652.
24. Schneider J., Bajwa P., Johnson F.C., Bhaumik S.R., Shilatifard A. Rtt109 is required for proper H3K56 acetylation: a chromatin mark associated with the elongating RNA polymerase II. J. Biol. Chem. 2006, 281:37270-37274.
25. Recht J., Tsubota T., Tanny J.C., Diaz R.L., Berger J.M., Zhang X., Garcia B.A., Shabanowitz J., Burlingame A.L., Hunt D.F., Kaufman P.D., Allis C.D. Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:6988-6993.
26. Celic I., Verreault A., Boeke J.D. Histone H3 K56 hyperacetylation perturbs replisomes and causes DNA damage. Genetics 2008, 179:1769-1784.
27. Fillingham J., Recht J., Silva A.C., Suter B., Emili A., Stagljar I., Krogan N.J., Allis C.D., Keogh M.C., Greenblatt J.F. Chaperone control of the activity and specificity of the histone H3 acetyltransferase Rtt109. Mol. Cell. Biol. 2008, 28:4342-4353.
28. Rufiange A., Jacques P.E., Bhat W., Robert F., Nourani A. Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1. Mol. Cell 2007, 27:393-405.
29. Chen C.C., Carson J.J., Feser J., Tamburini B., Zabaronick S., Linger J., Tyler J.K. Acetylated lysine 56 on histone H3 drives chromatin assembly after repair and signals for the completion of repair. Cell 2008, 134:231-243.
30. Kaplan T., Liu C.L., Erkmann J.A., Holik J., Grunstein M., Kaufman P.D., Friedman N., Rando O.J. Cell cycle- and chaperone-mediated regulation of H3K56ac incorporation in yeast. PLoS Genet. 2008, 4:e1000270.
31. Li Q., Zhou H., Wurtele H., Davies B., Horazdovsky B., Verreault A., Zhang Z. Acetylation of histone H3 lysine 56 regulates replication-coupled nucleosome assembly. Cell 2008, 134:244-255.
32. Xie W., Song C., Young N.L., Sperling A.S., Xu F., Sridharan R., Conway A.E., Garcia B.A., Plath K., Clark A.T., Grunstein M. Histone h3 lysine 56 acetylation is linked to the core transcriptional network in human embryonic stem cells. Mol. Cell 2009, 33:417-427.
33. Das C., Lucia M.S., Hansen K.C., Tyler J.K. CBP/p300-mediated acetylation of histone H3 on lysine 56. Nature 2009, 459:113-117.
34. Ye J., Ai X., Eugeni E.E., Zhang L., Carpenter L.R., Jelinek M.A., Freitas M.A., Parthun M.R. Histone H4 lysine 91 acetylation a core domain modification associated with chromatin assembly. Mol. Cell 2005, 18:123-130.
35. Cosgrove M.S., Boeke J.D., Wolberger C. Regulated nucleosome mobility and the histone code. Nat. Struct. Mol. Biol. 2004, 11:1037-1043.
36. Basu A., Rose K.L., Zhang J., Beavis R.C., Ueberheide B., Garcia B.A., Chait B., Zhao Y., Hunt D.F., Segal E., Allis C.D., Hake S.B. Proteome-wide prediction of acetylation substrates. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:13785-13790.
37. Zhang L., Eugeni E.E., Parthun M.R., Freitas M.A. Identification of novel histone post-translational modifications by peptide mass fingerprinting. Chromosoma 2003, 112:77-86.
38. Megee P.C., Morgan B.A., Mittman B.A., Smith M.M. Genetic analysis of histone H4: essential role of lysines subject to reversible acetylation. Science 1990, 247:841-845.
39. Zhang W., Bone J.R., Edmondson D.G., Turner B.M., Roth S.Y. Essential and redundant functions of histone acetylation revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase. EMBO J. 1998, 17:3155-3167.
40. Ma X.J., Wu J., Altheim B.A., Schultz M.C., Grunstein M. Deposition-related sites K5/K12 in histone H4 are not required for nucleosome deposition in yeast. Proc. Natl. Acad. Sci. U.S.A. 1998, 95:6693-6698.
41. Shibahara K., Verreault A., Stillman B. The N-terminal domains of histones H3 and H4 are not necessary for chromatin assembly factor-1-mediated nucleosome assembly onto replicated DNA in vitro. Proc. Natl. Acad. Sci. U.S.A. 2000, 97:7766-7771.
42. Ejlassi-Lassallette A., Mocquard E., Arnaud M.C., Thiriet C. H4 replication-dependent diacetylation and Hat1 promote S-phase chromatin assembly in vivo. Mol. Biol. Cell 2011, 22:245-255.
43. Alvarez F., Munoz F., Schilcher P., Imhof A., Almozuni G., Loyola A. Sequential establishment of marks on soluble histones H3 and H4. J. Biol. Chem. 2011, 286:17714-17721.
44. Lopez-Rodas G., Tordera V., Sanchez del Pino M.M., Franco L. Subcellular localization and nucleosome specificity of yeast histone acetyltransferases. Biochemistry 1991, 30:3728-3732.
45. Lopez-Rodas G., Tordera V., Sanchez del Pino M.M., Franco L. Yeast contains multiple forms of histone acetyltransferase. J. Biol. Chem. 1989, 264:19028-19033.
46. Lopez-Rodas G., Perez-Ortin J.E., Tordera V., Salvador M.L., Franco L. Partial purification and properties of two histone acetyltransferases from the yeast, Saccharomyces cerevisiae. Arch. Biochem. Biophys. 1985, 239:184-190.
47. Wiegand R.C., Brutlag D.L. Histone acetylase from Drosophila melanogaster specific for H4. J. Biol. Chem. 1981, 256:4578-4583.
48. Garcea R.L., Alberts B.M. Comparative studies of histone acetylation in nucleosomes, nuclei, and intact cells. Evidence for special factors which modify acetylase action. J. Biol. Chem. 1980, 255:11454-11463.
49. Sures I., Gallwitz D. Histone-specific acetyltransferases from calf thymus. Isolation, properties, and substrate specificity of three different enzymes. Biochemistry 1980, 19:943-951.
50. Parthun M.R., Widom J., Gottschling D.E. The major cytoplasmic histone acetyltransferase in yeast: links to chromatin replication and histone metabolism. Cell 1996, 87:85-94.
51. Kleff S., Andrulis E.D., Anderson C.W., Sternglanz R. Identification of a gene encoding a yeast histone H4 acetyltransferase. J. Biol. Chem. 1995, 270:24674-24677.
52. Mingarro I., Sendra R., Salvador M.L., Franco L. Site specificity of pea histone acetyltransferase B in vitro. J. Biol. Chem. 1993, 268:13248-13252.
53. Sobel R.E., Cook R.G., Allis C.D. Non-random acetylation of histone H4 by a cytoplasmic histone acetyltransferase as determined by novel methodology. J. Biol. Chem. 1994, 269:18576-18582.
54. Kolle D., Sarg B., Lindner H., Loidl P. Substrate and sequential site specificity of cytoplasmic histone acetyltransferases of maize and rat liver. FEBS Lett. 1998, 421:109-114.
55. Chang L., Loranger S.S., Mizzen C., Ernst S.G., Allis C.D., Annunziato A.T. Histones in transit: cytosolic histone complexes and diacetylation of H4 during nucleosome assembly in human cells. Biochemistry 1997, 36:469-480.
56. Richman R., Chicoine L.G., Collini M.P., Cook R.G., Allis C.D. Micronuclei and the cytoplasm of growing Tetrahymena contain a histone acetylase activity which is highly specific for free histone H4. J. Cell Biol. 1988, 106:1017-1026.
57. Kelly T.J., Qin S., Gottschling D.E., Parthun M.R. Type B histone acetyltransferase Hat1p participates in telomeric silencing. Mol. Cell. Biol. 2000, 20:7051-7058.
58. Qin S., Parthun M.R. Recruitment of the type B histone acetyltransferase Hat1p to chromatin is linked to DNA double-strand breaks. Mol. Cell. Biol. 2006, 26:3649-3658.
59. Barman H.K., Takami Y., Ono T., Nishijima H., Sanematsu F., Shibahara K., Nakayama T. Histone acetyltransferase 1 is dispensable for replication-coupled chromatin assembly but contributes to recover DNA damages created following replication blockage in vertebrate cells. Biochem. Biophys. Res. Commun. 2006, 345:1547-1557.
60. Poveda A., Sendra R. Site specificity of yeast histone acetyltransferase B complex in vivo. FEBS J. 2008, 275:2122-2136.
61. Campos E.I., Fillingham J., Li G., Zheng H., Voigt P., Kuo W.H., Seepany H., Gao Z., Day L.A., Greenblatt J.F., Reinberg D. The program for processing newly synthesized histones H3.1 and H4. Nat. Struct. Mol. Biol. 2010, 17:1343-1351.
62. Lee K.K., Workman J.L. Histone acetyltransferase complexes: one size doesn't fit all. Nat. Rev. Mol. Cell Biol. 2007, 8:284-295.
63. Lusser A., Eberharter A., Loidl A., Goralik-Schramel M., Horngacher M., Haas H., Loidl P. Analysis of the histone acetyltransferase B complex of maize embryos. Nucleic Acids Res. 1999, 27:4427-4435.
64. Imhof A., Wolffe A.P. Purification and properties of the Xenopus hat1 acetyltransferase: association with the 14-3-3 proteins in the oocyte nucleus [In Process Citation]. Biochemistry 1999, 38:13085-13093.
65. Verreault A., Kaufman P.D., Kobayashi R., Stillman B. Nucleosomal DNA regulates the core-histone-binding subunit of the human Hat1 acetyltransferase. Curr. Biol. 1998, 8:96-108.
66. Tie F., Furuyama T., Prasad-Sinha J., Jane E., Harte P.J. The Drosophila Polycomb group proteins ESC and E(Z) are present in a complex containing the histone-binding protein p55 and the histone deacetylase RPD3. Development 2001, 128:275-286.
67. Muller J., Hart C.M., Francis N.J., Vargas M.L., Sengupta A., Wild B., Miller E.L., O'Connor M.B., Kingston R.E., Simon J.A. Histone methyltransferase activity of a Drosophila Polycomb group repressor complex. Cell 2002, 111:197-208.
68. Kuzmichev A., Nishioka K., Erdjument-Bromage H., Tempst P., Reinberg D. Histone methyltransferase activity associated with a human multiprotein complex containing the enhancer of Zeste protein. Genes Dev. 2002, 16:2893-2905.
69. Qian Y.W., Lee E.Y. Dual retinoblastoma-binding proteins with properties related to a negative regulator of ras in yeast. J. Biol. Chem. 1995, 270:25507-25513.
70. Qian Y.W., Wang Y.C., Hollingsworth R.E., Jones D., Ling N., Lee E.Y. A retinoblastoma-binding protein related to a negative regulator of Ras in yeast. Nature 1993, 364:648-652.
71. Hassig C.A., Fleischer T.C., Billin A.N., Schreiber S.L., Ayer D.E. Histone deacetylase activity is required for full transcriptional repression by mSin3A. Cell 1997, 89:341-347.
72. Martinez-Balbas M.A., Tsukiyama T., Gdula D., Wu C. Drosophila NURF-55, a WD repeat protein involved in histone metabolism. Proc. Natl. Acad. Sci. U.S.A. 1998, 95:132-137.
73. Taunton J., Hassig C.A., Schreiber S.L. A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p [see comments]. Science 1996, 272:408-411.
74. Verreault A., Kaufman P.D., Kobayashi R., Stillman B. Nucleosome assembly by a complex of CAF-1 and acetylated histones H3/H4. Cell 1996, 87:95-104.
75. Zhang Y., Iratni R., Erdjument-Bromage H., Tempst P., Reinberg D. Histone deacetylases and SAP18, a novel polypeptide, are components of a human Sin3 complex. Cell 1997, 89:357-364.
76. Wade P.A., Jones P.L., Vermaak D., Wolffe A.P. A multiple subunit Mi-2 histone deacetylase from Xenopus laevis cofractionates with an associated Snf2 superfamily ATPase. Curr. Biol. 1998, 8:843-846.
77. Zhang Y., Ng H.H., Erdjument-Bromage H., Tempst P., Bird A., Reinberg D. Analysis of the NuRD subunits reveals a histone deacetylase core complex and a connection with DNA methylation. Genes Dev. 1999, 13:1924-1935.
78. Xue Y., Wong J., Moreno G.T., Young M.K., Cote J., Wang W. NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities. Mol. Cell 1998, 2:851-861.
79. Czermin B., Melfi R., McCabe D., Seitz V., Imhof A., Pirrotta V. Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites. Cell 2002, 111:185-196.
80. Suganuma T., Pattenden S.G., Workman J.L. Diverse functions of WD40 repeat proteins in histone recognition. Genes Dev. 2008, 22:1265-1268.
81. Song J.J., Garlick J.D., Kingston R.E. Structural basis of histone H4 recognition by p55. Genes Dev. 2008, 22:1313-1318.
82. Furuyama T., Dalal Y., Henikoff S. Chaperone-mediated assembly of centromeric chromatin in vitro. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:6172-6177.
83. Vermaak D., Wade P.A., Jones P.L., Shi Y.B., Wolffe A.P. Functional analysis of the SIN3-histone deacetylase RPD3-RbAp48-histone H4 connection in the Xenopus oocyte. Mol. Cell. Biol. 1999, 19:5847-5860.
84. Han J., Zhou H., Li Z., Xu R.M., Zhang Z. Acetylation of lysine 56 of histone H3 catalyzed by RTT109 and regulated by ASF1 is required for replisome integrity. J. Biol. Chem. 2007, 282:28587-28596.
85. Han J., Zhou H., Li Z., Xu R.M., Zhang Z. The Rtt109-Vps75 histone acetyltransferase complex acetylates non-nucleosomal histone H3. J. Biol. Chem. 2007, 282:14158-14164.
86. Burgess R.J., Zhou H., Han J., Zhang Z. A role for Gcn5 in replication-coupled nucleosome assembly. Mol. Cell 2010, 37:469-480.
87. Berndsen C.E., Tsubota T., Lindner S.E., Lee S., Holton J.M., Kaufman P.D., Keck J.L., Denu J.M. Molecular functions of the histone acetyltransferase chaperone complex Rtt109-Vps75. Nat. Struct. Mol. Biol. 2008, 15:948-956.
88. Selth L.A., Lorch Y., Ocampo-Hafalla M.T., Mitter R., Shales M., Krogan N.J., Kornberg R.D., Svejstrup J.Q. An rtt109-independent role for vps75 in transcription-associated nucleosome dynamics. Mol. Cell. Biol. 2009, 29:4220-4234.
89. Kolonko E.M., Albaugh B.N., Lindner S.E., Chen Y., Satyshur K.A., Arnold K.M., Kaufman P.D., Keck J.L., Denu J.M. Catalytic activation of histone acetyltransferase Rtt109 by a histone chaperone. Proc. Natl. Acad. Sci. U.S.A. 2010, 107:20275-20280.
90. Collins S.R., Miller K.M., Maas N.L., Roguev A., Fillingham J., Chu C.S., Schuldiner M., Gebbia M., Recht J., Shales M., Ding H., Xu H., Han J., Ingvarsdottir K., Cheng B., Andrews B., Boone C., Berger S.L., Hieter P., Zhang Z., Brown G.W., Ingles C.J., Emili A., Allis C.D., Toczyski D.P., Weissman J.S., Greenblatt J.F., Krogan N.J. Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature 2007, 446:806-810.
91. Sklenar A.R., Parthun M.R. Characterization of yeast histone H3-specific type B histone acetyltransferases identifies an ADA2-independent Gcn5p activity. BMC Biochem. 2004, 5:11.
92. Grant P.A., Duggan L., Cote J., Roberts S.M., Brownell J.E., Candau R., Ohba R., Owen-Hughes T., Allis C.D., Winston F., Berger S.L., Workman J.L. Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex. Genes Dev. 1997, 11:1640-1650.
93. Eberharter A., Sterner D.E., Schieltz D., Hassan A., Yates J.R., Berger S.L., Workman J.L. The ADA complex is a distinct histone acetyltransferase complex in Saccharomyces cerevisiae. Mol. Cell. Biol. 1999, 19:6621-6631.
94. Sklenar A.R., Parthun M.R. Characterization of yeast histone H3-specific type B histone acetyltransferases identifies an ADA2-independent Gcn5p activity. BMC Biochem. 2004, 5:11.
95. Ruiz-Garcia A.B., Sendra R., Galiana M., Pamblanco M., Perez-Ortin J.E., Tordera V. HAT1 and HAT2 proteins are components of a yeast nuclear histone acetyltransferase enzyme specific for free histone H4. J. Biol. Chem. 1998, 273:12599-12605.
96. Ai X., Parthun M.R. The nuclear Hat1p/Hat2p complex: a molecular link between type B histone acetyltransferases and chromatin assembly. Mol. Cell 2004, 14:195-205.
97. Poveda A., Pamblanco M., Tafrov S., Tordera V., Sternglanz R., Sendra R. Hif1 is a component of yeast histone acetyltransferase B, a complex mainly localized in the nucleus. J. Biol. Chem. 2004, 279:16033-16043.
98. Ge Z., Wang H., Parthun M.R. Nuclear Hat1p complex (NuB4) components participate in DNA repair-linked chromatin reassembly. J. Biol. Chem. 2011, 286:16790-16799.
99. Tagami H., Ray-Gallet D., Almouzni G., Nakatani Y. Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis. Cell 2004, 116:51-61.
100. Karam C.S., Kellner W.A., Takenaka N., Clemmons A.W., Corces V.G. 14-3-3 mediates histone cross-talk during transcription elongation in Drosophila. PLoS Genet. 2010, 6:e1000975.
101. Zippo A., Serafini R., Rocchigiani M., Pennacchini S., Krepelova A., Oliviero S. Histone crosstalk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation. Cell 2009, 138:1122-1136.
102. Lebel E.A., Boukamp P., Tafrov S.T. Irradiation with heavy-ion particles changes the cellular distribution of human histone acetyltransferase HAT1. Mol. Cell. Biochem. 2010, 339:271-284.
103. Welch J.E., Zimmerman L.J., Joseph D.R., O'Rand M.G. Characterization of a sperm-specific nuclear autoantigenic protein. I. Complete sequence and homology with the Xenopus protein, N1/N2. Biol. Reprod. 1990, 43:559-568.
104. Barman H.K., Takami Y., Nishijima H., Shibahara K., Sanematsu F., Nakayama T. Histone acetyltransferase-1 regulates integrity of cytosolic histone H3-H4 containing complex. Biochem. Biophys. Res. Commun. 2008, 373:624-630.
105. Jasencakova Z., Scharf A.N., Ask K., Corpet A., Imhof A., Almouzni G., Groth A. Replication stress interferes with histone recycling and predeposition marking of new histones. Mol. Cell 2010, 37:736-743.
106. Eberharter A., Lechner T., Goralik-Schramel M., Loidl P. Purification and characterization of the cytoplasmic histone acetyltransferase B of maize embryos. FEBS Lett. 1996, 386:75-81.
107. Blackwell J.S., Wilkinson S.T., Mosammaparast N., Pemberton L.F. Mutational analysis of H3 and H4 N termini reveals distinct roles in nuclear import. J. Biol. Chem. 2007, 282:20142-20150.
108. Suter B., Pogoutse O., Guo X., Krogan N., Lewis P., Greenblatt J.F., Rine J., Emili A. Association with the origin recognition complex suggests a novel role for histone acetyltransferase Hat1p/Hat2p. BMC Biol. 2007, 5:38.
109. Iizuka M., Matsui T., Takisawa H., Smith M.M. Regulation of replication licensing by acetyltransferase Hbo1. Mol. Cell. Biol. 2006, 26:1098-1108.
110. Iizuka M., Stillman B. Histone acetyltransferase HBO1 interacts with the ORC1 subunit of the human initiator protein. J. Biol. Chem. 1999, 274:23027-23034.
111. Mosammaparast N., Guo Y., Shabanowitz J., Hunt D.F., Pemberton L.F. Pathways mediating the nuclear import of histones H3 and H4 in yeast. J. Biol. Chem. 2002, 277:862-868.
112. Drane P., Ouararhni K., Depaux A., Shuaib M., Hamiche A. The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3. Genes Dev. 2010, 24:1253-1265.
113. Saade E., Mechold U., Kulyyassov A., Vertut D., Lipinski M., Ogryzko V. Analysis of interaction partners of H4 histone by a new proteomics approach. Proteomics 2009, 9:4934-4943.
114. Dutnall R.N., Tafrov S.T., Sternglanz R., Ramakrishnan V. Structure of the histone acetyltransferase Hat1: a paradigm for the GCN5-related N-acetyltransferase superfamily. Cell 1998, 94:427-438.
115. Benson L.J., Phillips J.A., Gu Y., Parthun M.R., Hoffman C.S., Annunziato A.T. Properties of the type B histone acetyltransferase Hat1: H4 tail interaction, site preference, and involvement in DNA repair. J. Biol. Chem. 2007, 282:836-842.
116. Makowski A.M., Dutnall R.N., Annunziato A.T. Effects of acetylation of histone H4 at lysines 8 and 16 on activity of the Hat1 histone acetyltransferase. J. Biol. Chem. 2001, 276:43499-43502.
117. Shahbazian M.D., Grunstein M. Functions of site-specific histone acetylation and deacetylation. Annu. Rev. Biochem. 2007, 76:75-100.
118. Das C., Tyler J.K., Churchill M.E. The histone shuffle: histone chaperones in an energetic dance. Trends Biochem. Sci. 2010, 35:476-489.
119. Park Y.J., Luger K. Histone chaperones in nucleosome eviction and histone exchange. Curr. Opin. Struct. Biol. 2008, 18:282-289.
120. Mersfelder E.L., Parthun M.R. Involvement of Hat1p (Kat1p) catalytic activity and subcellular localization in telomeric silencing. J. Biol. Chem. 2008, 283:29060-29068.
121. Corpet A., Almouzni G. Making copies of chromatin: the challenge of nucleosomal organization and epigenetic information. Trends Cell Biol. 2009, 19:29-41.
122. Bowman A., Ward R., Wiechens N., Singh V., El-Mkami H., Norman D.G., Owen-Hughes T. The histone chaperones Nap1 and Vps75 bind histones H3 and H4 in a tetrameric conformation. Mol. Cell 2011, 41:398-408.
123. Adkins M.W., Howar S.R., Tyler J.K. Chromatin disassembly mediated by the histone chaperone Asf1 is essential for transcriptional activation of the yeast PHO5 and PHO8 genes. Mol. Cell 2004, 14:657-666.
124. Kim H.J., Seol J.H., Han J.W., Youn H.D., Cho E.J. Histone chaperones regulate histone exchange during transcription. EMBO J. 2007, 26:4467-4474.
125. Schwabish M.A., Struhl K. Asf1 mediates histone eviction and deposition during elongation by RNA polymerase II. Mol. Cell 2006, 22:415-422.
126. Chen C.C., Tyler J. Chromatin reassembly signals the end of DNA repair. Cell Cycle 2008, 7:3792-3797.
127. Qin S., Parthun M.R. Histone H3 and the histone acetyltransferase Hat1p contribute to DNA double-strand break repair. Mol. Cell. Biol. 2002, 22:8353-8365.
128. Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R., Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage. Science 2007, 316:1160-1166.
129. Parthun M.R. Hat1: the emerging cellular roles of a type B histone acetyltransferase. Oncogene 2007, 26:5319-5328.
130. Kim S.C., Sprung R., Chen Y., Xu Y., Ball H., Pei J., Cheng T., Kho Y., Xiao H., Xiao L., Grishin N.V., White M., Yang X.J., Zhao Y. Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. Mol. Cell 2006, 23:607-618.
131. Yang X.J., Seto E. Lysine acetylation: codified crosstalk with other posttranslational modifications. Mol. Cell 2008, 31:449-461.