Nuclear Hat1p complex (NuB4) components participate in DNA repair-linked chromatin reassembly

Journal of Biological Chemistry

Volumn 286, Issue 19, 2011, Pages 16790-16799

  Ge, Zhongqi ^a   Wang, Huanyu ^a   Parthun, Mark R ^a  

^a OHIO STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CATALYTIC SUBUNITS; CHROMATIN ASSEMBLY; DNA DOUBLE STRAND BREAKS; DNA REPAIR; DOUBLE STRAND BREAK REPAIR; HISTONE ACETYLTRANSFERASES; HISTONE H3; LYSINE 56; REASSEMBLY;

ACETYLATION; AMINO ACIDS; DNA; DNA SEQUENCES; REPAIR;

CHROMOSOMES;

ARGININE; CHAPERONE; ENDONUCLEASE; HISTONE ACETYLTRANSFERASE; HISTONE ACETYLTRANSFERASE 1P; HISTONE ACETYLTRANSFERASE 2P; HISTONE H3; HISTONE H4; LYSINE; PROTEIN HIF1P; UNCLASSIFIED DRUG;

ARTICLE; CATALYSIS; CHROMATIN ASSEMBLY AND DISASSEMBLY; CHROMATIN IMMUNOPRECIPITATION; CHROMATIN STRUCTURE; CONTROLLED STUDY; DNA REPAIR; DOUBLE STRANDED DNA BREAK; ENZYME ACTIVITY; FUNGAL STRAIN; GENE LOCUS; GENOTYPE; HISTONE ACETYLATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN CLEAVAGE; PROTEIN EXPRESSION; PROTEIN FUNCTION; SACCHAROMYCES CEREVISIAE;

ACETYLATION; ALLELES; CATALYSIS; CELL NUCLEUS; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; DNA DAMAGE; DNA REPAIR; ENDONUCLEASES; HISTONE ACETYLTRANSFERASES; HISTONES; NUCLEAR PROTEINS; PROTEIN BINDING; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS;

EID: 79955759389     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.216846     Document Type: Article

References (55)

1. Kouzarides, T. (2007) Cell 128, 693-705
2. Ruiz-Carrillo, A., Wangh, L. J., and Allfrey, V. G. (1975) Science 190, 117-128
3. Jackson, V., Shires, A., Tanphaichitr, N., and Chalkley, R. (1976) J. Mol. Biol. 104, 471-483
4. Annunziato, A. T., and Seale, R. L. (1983) J. Biol. Chem. 258, 12675-12684
5. Annunziato, A. T., and Hansen, J. C. (2000) Gene Expr. 9, 37-61
6. Chicoine, L. G., Schulman, I. G., Richman, R., Cook, R. G., and Allis, C. D. (1986) J. Biol. Chem. 261, 1071-1076
7. Sobel, R. E., Cook, R. G., Perry, C. A., Annunziato, A. T., and Allis, C. D. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 1237-1241
8. Kuo, M. H., Brownell, J. E., Sobel, R. E., Ranalli, T. A., Cook, R. G., Edmondson, D. G., Roth, S. Y., and Allis, C. D. (1996) Nature 383, 269-272
9. Masumoto, H., Hawke, D., Kobayashi, R., and Verreault, A. (2005) Nature 436, 294-298
10. Ozdemir, A., Spicuglia, S., Lasonder, E., Vermeulen, M., Campsteijn, C., Stunnenberg, H. G., and Logie, C. (2005) J. Biol. Chem. 280, 25949-25952
11. Xu, F., Zhang, K., and Grunstein, M. (2005) Cell 121, 375-385
12. Ye, J., Ai, X., Eugeni, E. E., Zhang, L., Carpenter, L. R., Jelinek, M. A., Freitas, M. A., and Parthun, M. R. (2005) Mol. Cell 18, 123-130
13. Zhang, L., Eugeni, E. E., Parthun, M. R., and Freitas, M. A. (2003) Chromosoma 112, 77-86
14. Basu, A., Rose, K. L., Zhang, J., Beavis, R. C., Ueberheide, B., Garcia, B. A., Chait, B., Zhao, Y., Hunt, D. F., Segal, E., Allis, C. D., and Hake, S. B. (2009) Proc. Natl. Acad. Sci. U.S.A. 106, 13785-13790
15. Das, C., Lucia, M. S., Hansen, K. C., and Tyler, J. K. (2009) Nature 459, 113-117
16. Xie, W., Song, C., Young, N. L., Sperling, A. S., Xu, F., Sridharan, R., Conway, A. E., Garcia, B. A., Plath, K., Clark, A. T., and Grunstein, M. (2009) Mol. Cell 33, 417-427
17. Brownell, J. E., and Allis, C. D. (1996) Curr. Opin. Genet. Dev. 6, 176-184
18. Parthun, M. R., Widom, J., and Gottschling, D. E. (1996) Cell 87, 85-94
19. Kleff, S., Andrulis, E. D., Anderson, C. W., and Sternglanz, R. (1995) J. Biol. Chem. 270, 24674-24677
20. Kelly, T. J., Qin, S., Gottschling, D. E., and Parthun, M. R. (2000) Mol. Cell. Biol. 20, 7051-7058
21. Qin, S., and Parthun, M. R. (2002) Mol. Cell. Biol. 22, 8353-8365
22. Benson, L. J., Phillips, J. A., Gu, Y., Parthun, M. R., Hoffman, C. S., and Annunziato, A. T. (2007) J. Biol. Chem. 282, 836-842
23. Barman, H. K., Takami, Y., Nishijima, H., Shibahara, K., Sanematsu, F., and Nakayama, T. (2008) Biochem. Biophys. Res. Commun. 373, 624-630
24. Ai, X., and Parthun, M. R. (2004) Mol. Cell 14, 195-205
25. Poveda, A., Pamblanco, M., Tafrov, S., Tordera, V., Sternglanz, R., and Sendra, R. (2004) J. Biol. Chem. 279, 16033-16043
26. Qin, S., and Parthun, M. R. (2006) Mol. Cell. Biol. 26, 3649-3658
27. Chen, C. C., Carson, J. J., Feser, J., Tamburini, B., Zabaronick, S., Linger, J., and Tyler, J. K. (2008) Cell 134, 231-243
28. Osley, M. A., and Shen, X. (2006) Trends Genet. 22, 671-677
29. Tsukuda, T., Fleming, A. B., Nickoloff, J. A., and Osley, M. A. (2005) Nature 438, 379-383
30. Tsukuda, T., Trujillo, K. M., Martini, E., and Osley, M. A. (2009) Methods 48, 40-45
31. Haber, J. E. (1995) Bioessays 17, 609-620
32. Adams, A., Gottschling, D. E., Kaiser, C. A., and Stearns, T. (1997) Methods in Yeast Genetics, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
33. Durairaj, G., Chaurasia, P., Lahudkar, S., Malik, S., Shukla, A., and Bhaumik, S. R. (2010) J. Biol. Chem. 285, 30472-30479
34. Adkins, M. W., Howar, S. R., and Tyler, J. K. (2004) Mol. Cell 14, 657-666
35. Korber, P., Barbaric, S., Luckenbach, T., Schmid, A., Schermer, U. J., Blaschke, D., and Hörz, W. (2006) J. Biol. Chem. 281, 5539-5545
36. Tyler, J. K., Collins, K. A., Prasad-Sinha, J., Amiott, E., Bulger, M., Harte, P. J., Kobayashi, R., and Kadonaga, J. T. (2001) Mol. Cell. Biol. 21, 6574-6584
37. Green, E. M., Antczak, A. J., Bailey, A. O., Franco, A. A., Wu, K. J., Yates, J. R., 3rd, and Kaufman, P. D. (2005) Curr. Biol. 15, 2044-2049
38. Das, C., Tyler, J. K., and Churchill, M. E. (2010) Trends Biochem. Sci. 35, 476-489
39. Campos, E. I., Fillingham, J., Li, G., Zheng, H., Voigt, P., Kuo, W. H., Seepany, H., Gao, Z., Day, L. A., Greenblatt, J. F., and Reinberg, D. (2010) Nat. Struct. Mol. Biol. 17, 1343-1351
40. Fillingham, J., Recht, J., Silva, A. C., Suter, B., Emili, A., Stagljar, I., Krogan, N. J., Allis, C. D., Keogh, M. C., and Greenblatt, J. F. (2008) Mol. Cell. Biol. 28, 4342-4353
41. Ruiz-García, A. B., Sendra, R., Galiana, M., Pamblanco, M., Pérez-Ortín, J. E., and Tordera, V. (1998) J. Biol. Chem. 273, 12599-12605
42. Mosammaparast, N., Guo, Y., Shabanowitz, J., Hunt, D. F., and Pemberton, L. F. (2002) J. Biol. Chem. 277, 862-868
43. Adkins, M. W., Carson, J. J., English, C. M., Ramey, C. J., and Tyler, J. K. (2007) J. Biol. Chem. 282, 1334-1340
44. Tsubota, T., Berndsen, C. E., Erkmann, J. A., Smith, C. L., Yang, L., Freitas, M. A., Denu, J. M., and Kaufman, P. D. (2007) Mol. Cell 25, 703-712
45. Han, J., Zhou, H., Li, Z., Xu, R. M., and Zhang, Z. (2007) J. Biol. Chem. 282, 28587-28596
46. Han, J., Zhou, H., Li, Z., Xu, R. M., and Zhang, Z. (2007) J. Biol. Chem. 282, 14158-14164
47. Selth, L., and Svejstrup, J. Q. (2007) J. Biol. Chem. 282, 12358-12362
48. Tagami, H., Ray-Gallet, D., Almouzni, G., and Nakatani, Y. (2004) Cell 116, 51-61
49. Lewis, P. W., Elsaesser, S. J., Noh, K. M., Stadler, S. C., and Allis, C. D. (2010) Proc. Natl. Acad. Sci. U.S.A. 107, 14075-14080
50. Campos, E. I., and Reinberg, D. (2010) Genes Dev. 24, 1334-1338
51. Drané, P., Ouararhni, K., Depaux, A., Shuaib, M., and Hamiche, A. (2010) Genes Dev. 24, 1253-1265
52. De Koning, L., Corpet, A., Haber, J. E., and Almouzni, G. (2007) Nat. Struct. Mol. Biol. 14, 997-1007
53. Groth, A., Corpet, A., Cook, A. J., Roche, D., Bartek, J., Lukas, J., and Almouzni, G. (2007) Science 318, 1928-1931
54. Groth, A., Ray-Gallet, D., Quivy, J. P., Lukas, J., Bartek, J., and Almouzni, G. (2005) Mol. Cell 17, 301-311
55. Jasencakova, Z., Scharf, A. N., Ask, K., Corpet, A., Imhof, A., Almouzni, G., and Groth, A. (2010) Mol. Cell 37, 736-743