-
3
-
-
0028847955
-
Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4
-
Sobel R.E., Cook R.G., Perry C.A., Annunziato A.T., and Allis C.D. Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4. Proc. Natl. Acad. Sci. USA 92 (1995) 1237-1241
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 1237-1241
-
-
Sobel, R.E.1
Cook, R.G.2
Perry, C.A.3
Annunziato, A.T.4
Allis, C.D.5
-
4
-
-
0029835806
-
Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines
-
Kuo M.H., Brownell J.E., Sobel R.E., Ranalli T.A., Cook R.G., Edmondson D.G., Roth S.Y., and Allis C.D. Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines. Nature 383 (1996) 269-272
-
(1996)
Nature
, vol.383
, pp. 269-272
-
-
Kuo, M.H.1
Brownell, J.E.2
Sobel, R.E.3
Ranalli, T.A.4
Cook, R.G.5
Edmondson, D.G.6
Roth, S.Y.7
Allis, C.D.8
-
5
-
-
27644467857
-
Insights into the role of histone H3 and histone H4 core modifiable residues in Saccharomyces cerevisiae
-
Hyland E.M., Cosgrove M.S., Molina H., Wang D., Pandey A., Cotter R.J., and Boeke J.D. Insights into the role of histone H3 and histone H4 core modifiable residues in Saccharomyces cerevisiae. Mol. Cell. Biol. 25 (2005) 10060-10070
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 10060-10070
-
-
Hyland, E.M.1
Cosgrove, M.S.2
Molina, H.3
Wang, D.4
Pandey, A.5
Cotter, R.J.6
Boeke, J.D.7
-
6
-
-
22444448143
-
A role for cell cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response
-
Masumoto H., Hawke D., Kobayashi R., and Verreault A. A role for cell cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response. Nature 436 (2005) 294-298
-
(2005)
Nature
, vol.436
, pp. 294-298
-
-
Masumoto, H.1
Hawke, D.2
Kobayashi, R.3
Verreault, A.4
-
7
-
-
22544441929
-
Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae
-
Ozdemir A., Spicuglia S., Lasonder E., Vermeulen M., Campsteijn C., Stunnenberg H.G., and Logie C. Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae. J. Biol. Chem. 280 (2005) 25949-25952
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 25949-25952
-
-
Ozdemir, A.1
Spicuglia, S.2
Lasonder, E.3
Vermeulen, M.4
Campsteijn, C.5
Stunnenberg, H.G.6
Logie, C.7
-
8
-
-
18844413266
-
Acetylation in histone H3 globular domain regulates gene expression in yeast
-
Xu F., Zhang K., and Grunstein M. Acetylation in histone H3 globular domain regulates gene expression in yeast. Cell 121 (2005) 375-385
-
(2005)
Cell
, vol.121
, pp. 375-385
-
-
Xu, F.1
Zhang, K.2
Grunstein, M.3
-
9
-
-
33646472914
-
Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis
-
Recht J., Tsubota T., Tanny J.C., Diaz R.L., Berger J.M., Zhang X., Garcia B.A., Shabanowitz J., Burlingame A.L., Hunt D.F., et al. Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis. Proc. Natl. Acad. Sci. USA 103 (2006) 6988-6993
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 6988-6993
-
-
Recht, J.1
Tsubota, T.2
Tanny, J.C.3
Diaz, R.L.4
Berger, J.M.5
Zhang, X.6
Garcia, B.A.7
Shabanowitz, J.8
Burlingame, A.L.9
Hunt, D.F.10
-
10
-
-
33644702025
-
Chromatin assembly factor 1 interacts with histone H3 methylated at lysine 79 in the processes of epigenetic silencing and DNA repair
-
Zhou H., Madden B.J., Muddiman D.C., and Zhang Z. Chromatin assembly factor 1 interacts with histone H3 methylated at lysine 79 in the processes of epigenetic silencing and DNA repair. Biochemistry 45 (2006) 2852-2861
-
(2006)
Biochemistry
, vol.45
, pp. 2852-2861
-
-
Zhou, H.1
Madden, B.J.2
Muddiman, D.C.3
Zhang, Z.4
-
11
-
-
15944416371
-
Histone H4 lysine 91 acetylation: a core domain modification associated with chromatin assembly
-
Ye J., Ai X., Eugeni E.E., Zhang L., Rocco Carpenter L., Jelinek M.A., Freitas M.A., and Parthun M.R. Histone H4 lysine 91 acetylation: a core domain modification associated with chromatin assembly. Mol. Cell 18 (2005) 123-130
-
(2005)
Mol. Cell
, vol.18
, pp. 123-130
-
-
Ye, J.1
Ai, X.2
Eugeni, E.E.3
Zhang, L.4
Rocco Carpenter, L.5
Jelinek, M.A.6
Freitas, M.A.7
Parthun, M.R.8
-
12
-
-
0033552604
-
Duplication and maintenance of heterochromatin domains
-
Taddei A., Roche D., Sibarita J.B., Turner B.M., and Almouzni G. Duplication and maintenance of heterochromatin domains. J. Cell Biol. 147 (1999) 1153-1166
-
(1999)
J. Cell Biol.
, vol.147
, pp. 1153-1166
-
-
Taddei, A.1
Roche, D.2
Sibarita, J.B.3
Turner, B.M.4
Almouzni, G.5
-
13
-
-
0035957097
-
Dynamics of histone acetylation in Saccharomyces cerevisiae
-
Waterborg J.H. Dynamics of histone acetylation in Saccharomyces cerevisiae. Biochemistry 40 (2001) 2599-2605
-
(2001)
Biochemistry
, vol.40
, pp. 2599-2605
-
-
Waterborg, J.H.1
-
14
-
-
33745557847
-
Nucleocytosolic acetyl-coenzyme A synthetase required for histone acetylation and global transcription
-
in press
-
Takahashi H., McCaffery J.M., Irizarry R.A., and Boeke J.D. Nucleocytosolic acetyl-coenzyme A synthetase required for histone acetylation and global transcription. Mol. Cell (2006) in press
-
(2006)
Mol. Cell
-
-
Takahashi, H.1
McCaffery, J.M.2
Irizarry, R.A.3
Boeke, J.D.4
-
15
-
-
0034677535
-
Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase
-
Imai S., Armstrong C.M., Kaeberlein M., and Guarente L. Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase. Nature 403 (2000) 795-800
-
(2000)
Nature
, vol.403
, pp. 795-800
-
-
Imai, S.1
Armstrong, C.M.2
Kaeberlein, M.3
Guarente, L.4
-
16
-
-
0034705129
-
The silencing protein Sir2 and its homologs are NAD-dependent protein deacetylases
-
Landry J., Sutton A., Tafrov S.T., Heller R.C., Stebbins J., Pillus L., and Sternglanz R. The silencing protein Sir2 and its homologs are NAD-dependent protein deacetylases. Proc. Natl. Acad. Sci. USA 97 (2000) 5807-5811
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 5807-5811
-
-
Landry, J.1
Sutton, A.2
Tafrov, S.T.3
Heller, R.C.4
Stebbins, J.5
Pillus, L.6
Sternglanz, R.7
-
17
-
-
12944283150
-
+-dependent protein deacetylase activity in the Sir2 protein family
-
+-dependent protein deacetylase activity in the Sir2 protein family. Proc. Natl. Acad. Sci. USA 97 (2000) 6658-6663
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 6658-6663
-
-
Smith, J.S.1
Baker Brachmann, C.2
Celic, I.3
Kenna, M.A.4
Muhammad, S.5
Starai, V.J.6
Avalos, J.L.7
Escalante-Semerena, J.C.8
Grubmeyer, C.9
Wolberger, C.10
-
18
-
-
0034839973
-
Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin
-
Suka N., Suka Y., Carmen A.A., Wu J., and Grunstein M. Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin. Mol. Cell 8 (2001) 473-479
-
(2001)
Mol. Cell
, vol.8
, pp. 473-479
-
-
Suka, N.1
Suka, Y.2
Carmen, A.A.3
Wu, J.4
Grunstein, M.5
-
20
-
-
0028841317
-
The SIR2 gene family, conserved from bacteria to humans, functions in silencing, cell cycle progression, and chromosome stability
-
Brachmann C.B., Sherman J.M., Devine S.E., Cameron E.E., Pillus L., and Boeke J.D. The SIR2 gene family, conserved from bacteria to humans, functions in silencing, cell cycle progression, and chromosome stability. Genes Dev. 9 (1995) 2888-2902
-
(1995)
Genes Dev.
, vol.9
, pp. 2888-2902
-
-
Brachmann, C.B.1
Sherman, J.M.2
Devine, S.E.3
Cameron, E.E.4
Pillus, L.5
Boeke, J.D.6
-
21
-
-
0033887456
-
Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins
-
Frye R.A. Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins. Biochem. Biophys. Res. Commun. 273 (2000) 793-798
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.273
, pp. 793-798
-
-
Frye, R.A.1
-
22
-
-
2942564591
-
Sirtuins: Sir2-related NAD-dependent protein deacetylases
-
North B.J., and Verdin E. Sirtuins: Sir2-related NAD-dependent protein deacetylases. Genome Biol. 5 (2004) 224
-
(2004)
Genome Biol.
, vol.5
, pp. 224
-
-
North, B.J.1
Verdin, E.2
-
23
-
-
0347457075
-
Sir2-dependent activation of acetyl-CoA synthetase by deacetylation of active site lysine
-
Starai V.J., Celic I., Cole R.N., Boeke J.D., and Escalante-Semerena J.C. Sir2-dependent activation of acetyl-CoA synthetase by deacetylation of active site lysine. Science 298 (2002) 2390-2392
-
(2002)
Science
, vol.298
, pp. 2390-2392
-
-
Starai, V.J.1
Celic, I.2
Cole, R.N.3
Boeke, J.D.4
Escalante-Semerena, J.C.5
-
25
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
Spellman P.T., Sherlock G., Zhang M.Q., Iyer V.R., Anders K., Eisen M.B., Brown P.O., Botstein D., and Futcher B. Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell 9 (1998) 3273-3297
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
26
-
-
0037160097
-
Inhibition of silencing and accelerated aging by nicotinamide, a putative negative regulator of yeast Sir2 and human SIRT1
-
Bitterman K.J., Anderson R.M., Cohen H.Y., Latorre-Esteves M., and Sinclair D.A. Inhibition of silencing and accelerated aging by nicotinamide, a putative negative regulator of yeast Sir2 and human SIRT1. J. Biol. Chem. 277 (2002) 45099-45107
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 45099-45107
-
-
Bitterman, K.J.1
Anderson, R.M.2
Cohen, H.Y.3
Latorre-Esteves, M.4
Sinclair, D.A.5
-
27
-
-
0035917536
-
Crystal structure of a SIR2 homolog-NAD complex
-
Min J., Landry J., Sternglanz R., and Xu R.M. Crystal structure of a SIR2 homolog-NAD complex. Cell 105 (2001) 269-279
-
(2001)
Cell
, vol.105
, pp. 269-279
-
-
Min, J.1
Landry, J.2
Sternglanz, R.3
Xu, R.M.4
-
28
-
-
1642297558
-
Structural basis for the mechanism and regulation of Sir2 enzymes
-
Avalos J.L., Boeke J.D., and Wolberger C. Structural basis for the mechanism and regulation of Sir2 enzymes. Mol. Cell 13 (2004) 639-648
-
(2004)
Mol. Cell
, vol.13
, pp. 639-648
-
-
Avalos, J.L.1
Boeke, J.D.2
Wolberger, C.3
-
30
-
-
30144431571
-
Sir2 protein deacetylases: evidence for chemical intermediates and functions of a conserved histidine
-
Smith B.C., and Denu J.M. Sir2 protein deacetylases: evidence for chemical intermediates and functions of a conserved histidine. Biochemistry 45 (2006) 272-282
-
(2006)
Biochemistry
, vol.45
, pp. 272-282
-
-
Smith, B.C.1
Denu, J.M.2
-
31
-
-
0036229718
-
Mutations in Saccharomyces cerevisiae gene SIR2 can have differential effects on in vivo silencing phenotypes and in vitro histone deacetylation activity
-
Armstrong C.M., Kaeberlein M., Imai S.I., and Guarente L. Mutations in Saccharomyces cerevisiae gene SIR2 can have differential effects on in vivo silencing phenotypes and in vitro histone deacetylation activity. Mol. Biol. Cell 13 (2002) 1427-1438
-
(2002)
Mol. Biol. Cell
, vol.13
, pp. 1427-1438
-
-
Armstrong, C.M.1
Kaeberlein, M.2
Imai, S.I.3
Guarente, L.4
-
32
-
-
33745534953
-
New insights into the sirtuin mechanism from ternary complexes containing NAD+ and acetylated peptide
-
in press
-
Hoff K.G., Avalos J.A., Sens K., and Wolberger C.W. New insights into the sirtuin mechanism from ternary complexes containing NAD+ and acetylated peptide. Structure (2006) in press
-
(2006)
Structure
-
-
Hoff, K.G.1
Avalos, J.A.2
Sens, K.3
Wolberger, C.W.4
-
33
-
-
0742305875
-
Repairing DNA methylation damage
-
Sedgwick B. Repairing DNA methylation damage. Nat. Rev. Mol. Cell Biol. 5 (2004) 148-157
-
(2004)
Nat. Rev. Mol. Cell Biol.
, vol.5
, pp. 148-157
-
-
Sedgwick, B.1
-
34
-
-
0030446287
-
The repair of DNA methylation damage in Saccharomyces cerevisiae
-
Xiao W., Chow B.L., and Rathgeber L. The repair of DNA methylation damage in Saccharomyces cerevisiae. Curr. Genet. 30 (1996) 461-468
-
(1996)
Curr. Genet.
, vol.30
, pp. 461-468
-
-
Xiao, W.1
Chow, B.L.2
Rathgeber, L.3
-
35
-
-
0038730929
-
A central role for DNA replication forks in checkpoint activation and response
-
Tercero J.A., Longhese M.P., and Diffley J.F.X. A central role for DNA replication forks in checkpoint activation and response. Mol. Cell 11 (2003) 1323-1326
-
(2003)
Mol. Cell
, vol.11
, pp. 1323-1326
-
-
Tercero, J.A.1
Longhese, M.P.2
Diffley, J.F.X.3
-
36
-
-
0025137506
-
Mitotic chromosome transmission fidelity mutants in Saccharomyces cerevisiae
-
Spencer F., Gerring S.L., Connelly C., and Hieter P. Mitotic chromosome transmission fidelity mutants in Saccharomyces cerevisiae. Genetics 124 (1990) 237-249
-
(1990)
Genetics
, vol.124
, pp. 237-249
-
-
Spencer, F.1
Gerring, S.L.2
Connelly, C.3
Hieter, P.4
-
37
-
-
0035799281
-
Yeast histone deposition protein Asf1p requires Hir proteins and PCNA for heterochromatic silencing
-
Sharp J.A., Fouts E.T., Krawitz D.C., and Kaufman P.D. Yeast histone deposition protein Asf1p requires Hir proteins and PCNA for heterochromatic silencing. Curr. Biol. 11 (2001) 463-473
-
(2001)
Curr. Biol.
, vol.11
, pp. 463-473
-
-
Sharp, J.A.1
Fouts, E.T.2
Krawitz, D.C.3
Kaufman, P.D.4
-
38
-
-
0033518179
-
The RCAF complex mediates chromatin assembly during DNA replication and repair
-
Tyler J.K., Adams C.R., Chen S.R., Kobayashi R., Kamakaka R.T., and Kadonaga J.T. The RCAF complex mediates chromatin assembly during DNA replication and repair. Nature 402 (1999) 555-560
-
(1999)
Nature
, vol.402
, pp. 555-560
-
-
Tyler, J.K.1
Adams, C.R.2
Chen, S.R.3
Kobayashi, R.4
Kamakaka, R.T.5
Kadonaga, J.T.6
-
39
-
-
0026651652
-
Isolation of crt mutants constitutive for transcription of the DNA damage inducible gene RNR3 in Saccharomyces cerevisiae
-
Zhou Z., and Elledge S. Isolation of crt mutants constitutive for transcription of the DNA damage inducible gene RNR3 in Saccharomyces cerevisiae. Genetics 131 (1992) 851-866
-
(1992)
Genetics
, vol.131
, pp. 851-866
-
-
Zhou, Z.1
Elledge, S.2
-
40
-
-
0032826786
-
NORF5/HUG1 is a component of the MEC1-mediated checkpoint response to DNA damage and replication arrest in Saccharomyces cerevisiae
-
Basrai M.A., Velculescu V.E., Kinzler K.W., and Hieter P. NORF5/HUG1 is a component of the MEC1-mediated checkpoint response to DNA damage and replication arrest in Saccharomyces cerevisiae. Mol. Cell. Biol. 15 (1999) 7041-7049
-
(1999)
Mol. Cell. Biol.
, vol.15
, pp. 7041-7049
-
-
Basrai, M.A.1
Velculescu, V.E.2
Kinzler, K.W.3
Hieter, P.4
-
42
-
-
33644785887
-
Genetic analysis of Saccharomyces cerevisiae H2A serine 129 mutant suggests a functional relationship between H2A and the sister-chromatid cohesion partners Csm3-Tof1 for the repair of topoisomerase I-induced DNA damage
-
Redon C., Pilch D.R., and Bonner W.M. Genetic analysis of Saccharomyces cerevisiae H2A serine 129 mutant suggests a functional relationship between H2A and the sister-chromatid cohesion partners Csm3-Tof1 for the repair of topoisomerase I-induced DNA damage. Genetics 172 (2006) 67-76
-
(2006)
Genetics
, vol.172
, pp. 67-76
-
-
Redon, C.1
Pilch, D.R.2
Bonner, W.M.3
-
43
-
-
10744230485
-
Global mapping of the yeast genetic interaction network
-
Tong A.H., Lesage G., Bader G.D., Ding H., Xu H., Xin X., Young J., Berriz G.F., Brost R.L., Chang M., et al. Global mapping of the yeast genetic interaction network. Science 303 (2004) 808-813
-
(2004)
Science
, vol.303
, pp. 808-813
-
-
Tong, A.H.1
Lesage, G.2
Bader, G.D.3
Ding, H.4
Xu, H.5
Xin, X.6
Young, J.7
Berriz, G.F.8
Brost, R.L.9
Chang, M.10
-
44
-
-
33644778778
-
A DNA integrity network in the yeast Saccharomyces cerevisiae
-
Pan X., Ye P., Yuan D.S., Wang X., Bader J.S., and Boeke J.D. A DNA integrity network in the yeast Saccharomyces cerevisiae. Cell 124 (2006) 1069-1081
-
(2006)
Cell
, vol.124
, pp. 1069-1081
-
-
Pan, X.1
Ye, P.2
Yuan, D.S.3
Wang, X.4
Bader, J.S.5
Boeke, J.D.6
-
45
-
-
0028213449
-
Heat-inducible degron: a method for constructing temperature-sensitive mutants
-
Dohmen R.J., Wu P., and Varshavsky A. Heat-inducible degron: a method for constructing temperature-sensitive mutants. Science 263 (1994) 1273-1276
-
(1994)
Science
, vol.263
, pp. 1273-1276
-
-
Dohmen, R.J.1
Wu, P.2
Varshavsky, A.3
-
46
-
-
0036307707
-
Solvent mediated interactions in the structure of the nucleosome core particle at 1.9Å resolution
-
Davey C.A., Sargent D.E., Luger K., Maeder A.W., and Richmond T.J. Solvent mediated interactions in the structure of the nucleosome core particle at 1.9Å resolution. Nature 319 (2002) 1097-1113
-
(2002)
Nature
, vol.319
, pp. 1097-1113
-
-
Davey, C.A.1
Sargent, D.E.2
Luger, K.3
Maeder, A.W.4
Richmond, T.J.5
-
47
-
-
11144288986
-
Loss of replication control in Saccharomyces cerevisiae results in extensive DNA damage
-
Green B.M., and Li J.J. Loss of replication control in Saccharomyces cerevisiae results in extensive DNA damage. Mol. Biol. Cell 16 (2005) 421-432
-
(2005)
Mol. Biol. Cell
, vol.16
, pp. 421-432
-
-
Green, B.M.1
Li, J.J.2
|