-
1
-
-
25644436944
-
Translation initiation: Structures, mechanisms and evolution
-
DOI 10.1017/S0033583505004026, PII S0033583505004026
-
Marintchev, A.; Wagner, G. Translation initiation: structures, mechanisms and evolution Q. Rev. Biophys. 2004, 37 (3-4) 197-284 (Pubitemid 41379756)
-
(2004)
Quarterly Reviews of Biophysics
, vol.37
, Issue.3-4
, pp. 197-284
-
-
Marintchev, A.1
Wagner, G.2
-
2
-
-
3943080710
-
The molecular mechanics of eukaryotic translation
-
DOI 10.1146/annurev.biochem.73.030403.080419
-
Kapp, L. D.; Lorsch, J. R. The molecular mechanics of eukaryotic translation Annu. Rev. Biochem. 2004, 73, 657-704 (Pubitemid 39050383)
-
(2004)
Annual Review of Biochemistry
, vol.73
, pp. 657-704
-
-
Kapp, L.D.1
Lorsch, J.R.2
-
3
-
-
0035816596
-
Characterization of the mammalian initiation factor eIF2B complex as a GDP dissociation stimulator protein
-
Williams, D. D.; Price, N. T.; Loughlin, A. J.; Proud, C. G. Characterization of the mammalian initiation factor eIF2B complex as a GDP dissociation stimulator protein J. Biol. Chem. 2001, 276 (27) 24697-703
-
(2001)
J. Biol. Chem.
, vol.276
, Issue.27
, pp. 24697-703
-
-
Williams, D.D.1
Price, N.T.2
Loughlin, A.J.3
Proud, C.G.4
-
5
-
-
0037154965
-
Gene-specific regulation by general translation factors
-
DOI 10.1016/S0092-8674(02)00642-6
-
Dever, T. E. Gene-specific regulation by general translation factors Cell 2002, 108 (4) 545-56 (Pubitemid 34260879)
-
(2002)
Cell
, vol.108
, Issue.4
, pp. 545-556
-
-
Dever, T.E.1
-
7
-
-
0023262218
-
Evidence for a second phosphorylation site on eIF-2α from rabbit reticulocytes
-
DOI 10.1016/0014-5793(87)80105-9
-
Kudlicki, W.; Wettenhall, R. E.; Kemp, B. E.; Szyszka, R.; Kramer, G.; Hardesty, B. Evidence for a second phosphorylation site on eIF-2 alpha from rabbit reticulocytes FEBS Lett. 1987, 215 (1) 16-20 (Pubitemid 17099135)
-
(1987)
FEBS Letters
, vol.215
, Issue.1
, pp. 16-20
-
-
Kudlicki, W.1
Wettenhall, R.E.H.2
Kemp, B.E.3
-
9
-
-
12344305214
-
EIF2 and the control of cell physiology
-
DOI 10.1016/j.semcdb.2004.11.004, PII S1084952104001065, Protein Synthesis in Health and Disease
-
Proud, C. G. eIF2 and the control of cell physiology Semin. Cell Dev. Biol. 2005, 16 (1) 3-12 (Pubitemid 40126871)
-
(2005)
Seminars in Cell and Developmental Biology
, vol.16
, Issue.1
, pp. 3-12
-
-
Proud, C.G.1
-
10
-
-
0028086067
-
Identification of novel phosphorylation sites in the β-subunit of translation initiation factor eIF-2
-
DOI 10.1006/bbrc.1994.1843
-
Welsh, G. I.; Price, N. T.; Bladergroen, B. A.; Bloomberg, G.; Proud, C. G. Identification of novel phosphorylation sites in the beta-subunit of translation initiation factor eIF-2 Biochem. Biophys. Res. Commun. 1994, 201 (3) 1279-88 (Pubitemid 24234228)
-
(1994)
Biochemical and Biophysical Research Communications
, vol.201
, Issue.3
, pp. 1279-1288
-
-
Welsh, G.I.1
Price, N.T.2
Bladergroen, B.A.3
Bloomberg, G.4
Proud, C.G.5
-
11
-
-
33646095987
-
Expression and purification of the subunits of human translational initiation factor 2 (eIF2): Phosphorylation of eIF2 alpha and beta
-
Suragani, R. N.; Ghosh, S.; Ehtesham, N. Z.; Ramaiah, K. V. Expression and purification of the subunits of human translational initiation factor 2 (eIF2): phosphorylation of eIF2 alpha and beta Protein Expr. Purif. 2006, 47 (1) 225-33
-
(2006)
Protein Expr. Purif.
, vol.47
, Issue.1
, pp. 225-33
-
-
Suragani, R.N.1
Ghosh, S.2
Ehtesham, N.Z.3
Ramaiah, K.V.4
-
12
-
-
0031914976
-
DNA-dependent protein kinase interacts with antigen receptor response element binding proteins NF90 and NF45
-
DOI 10.1074/jbc.273.4.2136
-
Ting, N. S.; Kao, P. N.; Chan, D. W.; Lintott, L. G.; Lees-Miller, S. P. DNA-dependent protein kinase interacts with antigen receptor response element binding proteins NF90 and NF45 J. Biol. Chem. 1998, 273 (4) 2136-45 (Pubitemid 28069263)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.4
, pp. 2136-2145
-
-
Ting, N.S.Y.1
Kao, P.N.2
Chan, D.W.3
Lintott, L.G.4
Lees-Miller, S.P.5
-
13
-
-
0035004387
-
Minimum requirements for the function of eukaryotic translation initiation factor 2
-
Erickson, F. L.; Nika, J.; Rippel, S.; Hannig, E. M. Minimum requirements for the function of eukaryotic translation initiation factor 2 Genetics 2001, 158 (1) 123-32 (Pubitemid 32428635)
-
(2001)
Genetics
, vol.158
, Issue.1
, pp. 123-132
-
-
Les Erickson, F.1
Nika, J.2
Rippel, S.3
Hannig, E.M.4
-
14
-
-
48349115335
-
Intersubunit and interprotein interactions of alpha- and beta-subunits of human eIF2: Effect of phosphorylation
-
Rajesh, K.; Iyer, A.; Suragani, R. N.; Ramaiah, K. V. Intersubunit and interprotein interactions of alpha- and beta-subunits of human eIF2: Effect of phosphorylation Biochem. Biophys. Res. Commun. 2008, 374 (2) 336-40
-
(2008)
Biochem. Biophys. Res. Commun.
, vol.374
, Issue.2
, pp. 336-40
-
-
Rajesh, K.1
Iyer, A.2
Suragani, R.N.3
Ramaiah, K.V.4
-
15
-
-
0033559265
-
Conserved bipartite motifs in yeast eIF5 and eIF2Bε, GTPase-activating and GDP-GTP exchange factors in translation initiation, mediate binding to their common substrate eIF2
-
Asano, K.; Krishnamoorthy, T.; Phan, L.; Pavitt, G. D.; Hinnebusch, A. G. Conserved bipartite motifs in yeast eIF5 and eIF2Bepsilon, GTPase-activating and GDP-GTP exchange factors in translation initiation, mediate binding to their common substrate eIF2 EMBO J. 1999, 18 (6) 1673-88 (Pubitemid 29127079)
-
(1999)
EMBO Journal
, vol.18
, Issue.6
, pp. 1673-1688
-
-
Asano, K.1
Krishnamoorthy, T.2
Phan, L.3
Pavitt, G.D.4
Hinnebusch, A.G.5
-
16
-
-
0031282976
-
Specific interaction of eukaryocytic translation initiation factor 5 (eIF5) with the β-subunit of eIF2
-
DOI 10.1074/jbc.272.50.31712
-
Das, S.; Maiti, T.; Das, K.; Maitra, U. Specific interaction of eukaryotic translation initiation factor 5 (eIF5) with the beta-subunit of eIF2 J. Biol. Chem. 1997, 272 (50) 31712-8 (Pubitemid 28013319)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.50
, pp. 31712-31718
-
-
Das, S.1
Maiti, T.2
Das, K.3
Maitra, U.4
-
17
-
-
0032579399
-
Identification of interprotein interactions between the subunits of eukaryotic initiation factors eIF2 and eIF2B
-
DOI 10.1074/jbc.273.5.3039
-
Kimball, S. R.; Heinzinger, N. K.; Horetsky, R. L.; Jefferson, L. S. Identification of interprotein interactions between the subunits of eukaryotic initiation factors eIF2 and eIF2B J. Biol. Chem. 1998, 273 (5) 3039-44 (Pubitemid 28133958)
-
(1998)
Journal of Biological Chemistry
, vol.273
, Issue.5
, pp. 3039-3044
-
-
Kimball, S.R.1
Heinzinger, N.K.2
Horetsky, R.L.3
Jefferson, L.S.4
-
18
-
-
0032931764
-
2 motif
-
Laurino, J. P.; Thompson, G. M.; Pacheco, E.; Castilho, B. A. The beta subunit of eukaryotic translation initiation factor 2 binds mRNA through the lysine repeats and a region comprising the C2-C2 motif Mol. Cell. Biol. 1999, 19 (1) 173-81 (Pubitemid 29018420)
-
(1999)
Molecular and Cellular Biology
, vol.19
, Issue.1
, pp. 173-181
-
-
Laurino, J.P.1
Thompson, G.M.2
Pacheco, E.3
Castilho, B.A.4
-
19
-
-
9644291558
-
Physical association of eukaryotic initiation factor (eIF) 5 carboxyl-terminal domain with the lysine-rich eIF2β segment strongly enhances its binding to eIF3
-
DOI 10.1074/jbc.M409609200
-
Singh, C. R.; Yamamoto, Y.; Asano, K. Physical association of eukaryotic initiation factor (eIF) 5 carboxyl-terminal domain with the lysine-rich eIF2beta segment strongly enhances its binding to eIF3 J. Biol. Chem. 2004, 279 (48) 49644-55 (Pubitemid 39577767)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.48
, pp. 49644-49655
-
-
Singh, C.R.1
Yamamoto, Y.2
Asano, K.3
-
20
-
-
0036846237
-
Direct eIF2-eIF3 contact in the multifactor complex is important for translation initiation in vivo
-
DOI 10.1093/emboj/cdf563
-
Valasek, L.; Nielsen, K. H.; Hinnebusch, A. G. Direct eIF2-eIF3 contact in the multifactor complex is important for translation initiation in vivo EMBO J. 2002, 21 (21) 5886-98 (Pubitemid 35315286)
-
(2002)
EMBO Journal
, vol.21
, Issue.21
, pp. 5886-5898
-
-
Valasek, L.1
Nielsen, K.H.2
Hinnebusch, A.G.3
-
21
-
-
68949149110
-
Phosphorylation of plant translation initiation factors by CK2 enhances the in vitro interaction of multifactor complex components
-
Dennis, M. D.; Person, M. D.; Browning, K. S. Phosphorylation of plant translation initiation factors by CK2 enhances the in vitro interaction of multifactor complex components J. Biol. Chem. 2009, 284 (31) 20615-28
-
(2009)
J. Biol. Chem.
, vol.284
, Issue.31
, pp. 20615-28
-
-
Dennis, M.D.1
Person, M.D.2
Browning, K.S.3
-
22
-
-
2942598149
-
PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation
-
DOI 10.1002/pmic.200300772
-
Hornbeck, P. V.; Chabra, I.; Kornhauser, J. M.; Skrzypek, E.; Zhang, B. PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation Proteomics 2004, 4 (6) 1551-61 (Pubitemid 38738314)
-
(2004)
Proteomics
, vol.4
, Issue.6
, pp. 1551-1561
-
-
Hornbeck, P.V.1
Chabra, I.2
Kornhauser, J.M.3
Skrzypek, E.4
Zhang, B.5
-
23
-
-
0027982398
-
Translation initiation factor eIF-2. Cloning and expression of the human cDNA encoding the gamma-subunit
-
Gaspar, N. J.; Kinzy, T. G.; Scherer, B. J.; Humbelin, M.; Hershey, J. W.; Merrick, W. C. Translation initiation factor eIF-2. Cloning and expression of the human cDNA encoding the gamma-subunit J. Biol. Chem. 1994, 269 (5) 3415-22
-
(1994)
J. Biol. Chem.
, vol.269
, Issue.5
, pp. 3415-22
-
-
Gaspar, N.J.1
Kinzy, T.G.2
Scherer, B.J.3
Humbelin, M.4
Hershey, J.W.5
Merrick, W.C.6
-
24
-
-
0025325702
-
Affinity labeling of eukaryotic initiation factor 2 and elongation factor 1αβγ with GTP analogs
-
DOI 10.1016/0003-9861(90)90426-Y
-
Anthony, D. D., Jr.; Kinzy, T. G.; Merrick, W. C. Affinity labeling of eukaryotic initiation factor 2 and elongation factor 1 alpha beta gamma with GTP analogs Arch. Biochem. Biophys. 1990, 281 (1) 157-62 (Pubitemid 20232886)
-
(1990)
Archives of Biochemistry and Biophysics
, vol.281
, Issue.1
, pp. 157-162
-
-
Anthony Jr., D.D.1
Kinzy, T.G.2
Merrick, W.C.3
-
25
-
-
0019332795
-
The alpha and gamma subunits of initiation factor eIF-2 can be cross-linked to 18S ribosomal RNA within the quaternary initiation complex, eIF-2.Met-tRNAf.GDPCP.small ribosomal subunit
-
Westermann, P.; Nygard, O.; Bielka, H. The alpha and gamma subunits of initiation factor eIF-2 can be cross-linked to 18S ribosomal RNA within the quaternary initiation complex, eIF-2.Met-tRNAf.GDPCP.small ribosomal subunit Nucleic Acids Res. 1980, 8 (14) 3065-71
-
(1980)
Nucleic Acids Res.
, vol.8
, Issue.14
, pp. 3065-71
-
-
Westermann, P.1
Nygard, O.2
Bielka, H.3
-
26
-
-
0024586622
-
GTP interacts through its ribose and phosphate moieties with different subunits of the eukaryotic initiation factor eIF-2
-
DOI 10.1016/0014-5793(89)80555-1
-
Bommer, U. A.; Kurzchalia, T. V. GTP interacts through its ribose and phosphate moieties with different subunits of the eukaryotic initiation factor eIF-2 FEBS Lett. 1989, 244 (2) 323-7 (Pubitemid 19067152)
-
(1989)
FEBS Letters
, vol.244
, Issue.2
, pp. 323-327
-
-
Bommer, U.-A.1
Kurzchalia, T.V.2
-
27
-
-
0035846821
-
Biochemical analysis of the eIF2βγ complex reveals a structural function for eIF2α in catalyzed nucleotide exchange
-
DOI 10.1074/jbc.M007398200
-
Nika, J.; Rippel, S.; Hannig, E. M. Biochemical analysis of the eIF2beta gamma complex reveals a structural function for eIF2alpha in catalyzed nucleotide exchange J. Biol. Chem. 2001, 276 (2) 1051-6 (Pubitemid 32096527)
-
(2001)
Journal of Biological Chemistry
, vol.276
, Issue.2
, pp. 1051-1056
-
-
Nika, J.1
Rippel, S.2
Hannig, E.M.3
-
28
-
-
1642304746
-
X-ray Structure of Translation Initiation Factor eIF2γ: Implications for tRNA and eIF2α binding
-
DOI 10.1074/jbc.M310418200
-
Roll-Mecak, A.; Alone, P.; Cao, C.; Dever, T. E.; Burley, S. K. X-ray structure of translation initiation factor eIF2gamma: implications for tRNA and eIF2alpha binding J. Biol. Chem. 2004, 279 (11) 10634-42 (Pubitemid 38372675)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.11
, pp. 10634-10642
-
-
Roll-Mecak, A.1
Alone, P.2
Cao, C.3
Dever, T.E.4
Burley, S.K.5
-
29
-
-
33747883046
-
The N-terminal lysine residue-rich domain II and the 340-430 amino acid segment of eukaryotic initiation factor 2-associated glycoprotein p67 are the binding sites for the γ-subunit of eIF2
-
DOI 10.1016/j.yexcr.2006.03.034, PII S0014482706002503
-
Ghosh, A.; Datta, R.; Majumdar, A.; Bhattacharya, M.; Datta, B. The N-terminal lysine residue-rich domain II and the 340-430 amino acid segment of eukaryotic initiation factor 2-associated glycoprotein p67 are the binding sites for the gamma-subunit of eIF2 Exp. Cell Res. 2006, 312 (16) 3184-203 (Pubitemid 44292666)
-
(2006)
Experimental Cell Research
, vol.312
, Issue.16
, pp. 3184-3203
-
-
Ghosh, A.1
Datta, R.2
Majumdar, A.3
Bhattacharya, M.4
Datta, B.5
-
30
-
-
0035231288
-
Initiation factor eIF2 alpha phosphorylation in stress responses and apoptosis
-
Clemens, M. J. Initiation factor eIF2 alpha phosphorylation in stress responses and apoptosis Prog. Mol. Subcell. Biol. 2001, 27, 57-89
-
(2001)
Prog. Mol. Subcell. Biol.
, vol.27
, pp. 57-89
-
-
Clemens, M.J.1
-
31
-
-
0037007203
-
The large subunit of initiation factor aIF2 is a close structural homologue of elongation factors
-
DOI 10.1093/emboj/21.7.1821
-
Schmitt, E.; Blanquet, S.; Mechulam, Y. The large subunit of initiation factor aIF2 is a close structural homologue of elongation factors EMBO J. 2002, 21 (7) 1821-32 (Pubitemid 34614638)
-
(2002)
EMBO Journal
, vol.21
, Issue.7
, pp. 1821-1832
-
-
Schmitt, E.1
Blanquet, S.2
Mechulam, Y.3
-
32
-
-
34548846390
-
New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA
-
DOI 10.1016/j.jmb.2007.07.048, PII S0022283607009862
-
Nikonov, O.; Stolboushkina, E.; Nikulin, A.; Hasenohrl, D.; Blasi, U.; Manstein, D. J.; Fedorov, R.; Garber, M.; Nikonov, S. New insights into the interactions of the translation initiation factor 2 from archaea with guanine nucleotides and initiator tRNA J. Mol. Biol. 2007, 373 (2) 328-36 (Pubitemid 47445565)
-
(2007)
Journal of Molecular Biology
, vol.373
, Issue.2
, pp. 328-336
-
-
Nikonov, O.1
Stolboushkina, E.2
Nikulin, A.3
Hasenohrl, D.4
Blasi, U.5
Manstein, D.J.6
Fedorov, R.7
Garber, M.8
Nikonov, S.9
-
33
-
-
33744957161
-
Direct binding of translation initiation factor eIF2γ-G domain to its GTPase-activating and GDP-GTP exchange factors eIF5 and eIF2Bε
-
DOI 10.1074/jbc.M511700200
-
Alone, P. V.; Dever, T. E. Direct binding of translation initiation factor eIF2gamma-G domain to its GTPase-activating and GDP-GTP exchange factors eIF5 and eIF2B epsilon J. Biol. Chem. 2006, 281 (18) 12636-44 (Pubitemid 43855353)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.18
, pp. 12636-12644
-
-
Alone, P.V.1
Dever, T.E.2
-
34
-
-
33644790001
-
Structural switch of the γ subunit in an archaeal aIF2αγ heterodimer
-
DOI 10.1016/j.str.2005.09.020, PII S0969212605004004
-
Yatime, L.; Mechulam, Y.; Blanquet, S.; Schmitt, E. Structural switch of the gamma subunit in an archaeal aIF2 alpha gamma heterodimer Structure 2006, 14 (1) 119-28 (Pubitemid 43350079)
-
(2006)
Structure
, vol.14
, Issue.1
, pp. 119-128
-
-
Yatime, L.1
Mechulam, Y.2
Blanquet, S.3
Schmitt, E.4
-
35
-
-
55849085351
-
Translation initiation factor 2gamma mutant alters start codon selection independent of Met-tRNA binding
-
Alone, P. V.; Cao, C.; Dever, T. E. Translation initiation factor 2gamma mutant alters start codon selection independent of Met-tRNA binding Mol. Cell. Biol. 2008, 28 (22) 6877-88
-
(2008)
Mol. Cell. Biol.
, vol.28
, Issue.22
, pp. 6877-88
-
-
Alone, P.V.1
Cao, C.2
Dever, T.E.3
-
36
-
-
57449110193
-
Mass spectrometry across the sciences
-
McLafferty, F. W. Mass spectrometry across the sciences Proc. Natl. Acad. Sci. U.S.A. 2008, 105 (47) 18088-9
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, Issue.47
, pp. 18088-9
-
-
McLafferty, F.W.1
-
37
-
-
35848970747
-
Mapping protein post-translational modifications with mass spectrometry
-
DOI 10.1038/nmeth1100, PII NMETH1100
-
Witze, E. S.; Old, W. M.; Resing, K. A.; Ahn, N. G. Mapping protein post-translational modifications with mass spectrometry Nat. Methods 2007, 4 (10) 798-806 (Pubitemid 350055576)
-
(2007)
Nature Methods
, vol.4
, Issue.10
, pp. 798-806
-
-
Witze, E.S.1
Old, W.M.2
Resing, K.A.3
Ahn, N.G.4
-
38
-
-
0037434980
-
From genomics to proteomics
-
DOI 10.1038/nature01510
-
Tyers, M.; Mann, M. From genomics to proteomics Nature 2003, 422 (6928) 193-7 (Pubitemid 36362756)
-
(2003)
Nature
, vol.422
, Issue.6928
, pp. 193-197
-
-
Tyers, M.1
Mann, M.2
-
39
-
-
0037435030
-
Mass spectrometry-based proteomics
-
DOI 10.1038/nature01511
-
Aebersold, R.; Mann, M. Mass spectrometry-based proteomics Nature 2003, 422 (6928) 198-207 (Pubitemid 36362757)
-
(2003)
Nature
, vol.422
, Issue.6928
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
40
-
-
0024438708
-
Electrospray ionization for mass spectrometry of large biomolecules
-
Fenn, J. B.; Mann, M.; Meng, C. K.; Wong, S. F.; Whitehouse, C. M. Electrospray ionization for mass spectrometry of large biomolecules Science 1989, 246 (4926) 64-71 (Pubitemid 19252085)
-
(1989)
Science
, vol.246
, Issue.4926
, pp. 64-71
-
-
Fenn, J.B.1
Mann, M.2
Meng, C.K.3
Wong, S.F.4
Whitehouse, C.M.5
-
41
-
-
0032948082
-
Bioanalytic applications of mass spectrometry
-
DOI 10.1016/S0958-1669(99)80005-6
-
Costello, C. E. Bioanalytic applications of mass spectrometry Curr. Opin. Biotechnol. 1999, 10 (1) 22-8 (Pubitemid 29054621)
-
(1999)
Current Opinion in Biotechnology
, vol.10
, Issue.1
, pp. 22-28
-
-
Costello, C.E.1
-
42
-
-
33847616949
-
Reproducible isolation of distinct, overlapping segments of the phosphoproteome
-
DOI 10.1038/nmeth1005, PII NMETH1005
-
Bodenmiller, B.; Mueller, L. N.; Mueller, M.; Domon, B.; Aebersold, R. Reproducible isolation of distinct, overlapping segments of the phosphoproteome Nat. Methods 2007, 4 (3) 231-7 (Pubitemid 46358873)
-
(2007)
Nature Methods
, vol.4
, Issue.3
, pp. 231-237
-
-
Bodenmiller, B.1
Mueller, L.N.2
Mueller, M.3
Domon, B.4
Aebersold, R.5
-
43
-
-
34250378852
-
Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry
-
DOI 10.1074/mcp.M600399-MCP200
-
Damoc, E.; Fraser, C. S.; Zhou, M.; Videler, H.; Mayeur, G. L.; Hershey, J. W.; Doudna, J. A.; Robinson, C. V.; Leary, J. A. Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry Mol. Cell. Proteomics 2007, 6 (7) 1135-46 (Pubitemid 47099225)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.7
, pp. 1135-1146
-
-
Damoc, E.1
Fraser, C.S.2
Zhou, M.3
Videler, H.4
Mayeur, G.L.5
Hershey, J.W.B.6
Doudna, J.A.7
Robinson, C.V.8
Leary, J.A.9
-
44
-
-
24944519450
-
Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns
-
DOI 10.1074/mcp.T500007-MCP200
-
Larsen, M. R.; Thingholm, T. E.; Jensen, O. N.; Roepstorff, P.; Jorgensen, T. J. Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns Mol. Cell. Proteomics 2005, 4 (7) 873-86 (Pubitemid 41309146)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.7
, pp. 873-886
-
-
Larsen, M.R.1
Thingholm, T.E.2
Jensen, O.N.3
Roepstorff, P.4
Jorgensen, T.J.D.5
-
45
-
-
14344257790
-
Detection and localization of protein modifications by high resolution tandem mass spectrometry
-
DOI 10.1002/mas.20009
-
Meng, F.; Forbes, A. J.; Miller, L. M.; Kelleher, N. L. Detection and localization of protein modifications by high resolution tandem mass spectrometry Mass Spectrom. Rev. 2005, 24 (2) 126-34 (Pubitemid 40325546)
-
(2005)
Mass Spectrometry Reviews
, vol.24
, Issue.2
, pp. 126-134
-
-
Meng, F.1
Forbes, A.J.2
Miller, L.M.3
Kelleher, N.L.4
-
46
-
-
0034506737
-
Five-membered ring formation in unimolecular reactions of peptides: A key structural element controlling low-energy collision-induced dissociation of peptides
-
DOI 10.1002/1096-9888(200012)35:12<1382::AID-JMS84>3.0.CO;2-6
-
Schlosser, A.; Lehmann, W. D. Five-membered ring formation in unimolecular reactions of peptides: a key structural element controlling low-energy collision-induced dissociation of peptides J. Mass Spectrom. 2000, 35 (12) 1382-90 (Pubitemid 32063644)
-
(2000)
Journal of Mass Spectrometry
, vol.35
, Issue.12
, pp. 1382-1390
-
-
Schlosser, A.1
Lehmann, W.D.2
-
47
-
-
12444345515
-
Tandem mass tags: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS
-
DOI 10.1021/ac0262560
-
Thompson, A.; Schafer, J.; Kuhn, K.; Kienle, S.; Schwarz, J.; Schmidt, G.; Neumann, T.; Johnstone, R.; Mohammed, A. K.; Hamon, C. Tandem mass tags: a novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS Anal. Chem. 2003, 75 (8) 1895-904 (Pubitemid 36438013)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.8
, pp. 1895-1904
-
-
Thompson, A.1
Schafer, J.2
Kuhn, K.3
Kienle, S.4
Schwarz, J.5
Schmidt, G.6
Neumann, T.7
Hamon, C.8
-
48
-
-
22444444478
-
Mass spectrometric analysis of the human 40S ribosomal subunit: Native and HCV IRES-bound complexes
-
DOI 10.1110/ps.041293005
-
Yu, Y.; Ji, H.; Doudna, J. A.; Leary, J. A. Mass spectrometric analysis of the human 40S ribosomal subunit: native and HCV IRES-bound complexes Protein Sci. 2005, 14 (6) 1438-46 (Pubitemid 41007909)
-
(2005)
Protein Science
, vol.14
, Issue.6
, pp. 1438-1446
-
-
Yu, Y.1
Ji, H.2
Doudna, J.A.3
Leary, J.A.4
-
49
-
-
37249066243
-
RACK1, a PKC targeting protein, is exclusively localized to basal airway epithelial cells
-
DOI 10.1369/jhc.7A7249.2007
-
Slager, R. E.; Devasure, J. M.; Pavlik, J. A.; Sisson, J. H.; Wyatt, T. A. RACK1, a PKC targeting protein, is exclusively localized to basal airway epithelial cells J. Histochem. Cytochem. 2008, 56 (1) 7-14 (Pubitemid 350276497)
-
(2008)
Journal of Histochemistry and Cytochemistry
, vol.56
, Issue.1
, pp. 7-14
-
-
Slager, R.E.1
Devasure, J.M.2
Pavlik, J.A.3
Sisson, J.H.4
Wyatt, T.A.5
-
50
-
-
66449084442
-
Infrastructure for the life sciences: Design and implementation of the UniProt website
-
Jain, E.; Bairoch, A.; Duvaud, S.; Phan, I.; Redaschi, N.; Suzek, B. E.; Martin, M. J.; McGarvey, P.; Gasteiger, E. Infrastructure for the life sciences: design and implementation of the UniProt website BMC Bioinform. 2009, 10, 136
-
(2009)
BMC Bioinform.
, vol.10
, pp. 136
-
-
Jain, E.1
Bairoch, A.2
Duvaud, S.3
Phan, I.4
Redaschi, N.5
Suzek, B.E.6
Martin, M.J.7
McGarvey, P.8
Gasteiger, E.9
-
51
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
DOI 10.1093/nar/gkg500
-
Chenna, R.; Sugawara, H.; Koike, T.; Lopez, R.; Gibson, T. J.; Higgins, D. G.; Thompson, J. D. Multiple sequence alignment with the Clustal series of programs Nucleic Acids Res. 2003, 31 (13) 3497-500 (Pubitemid 37442184)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
52
-
-
2942564430
-
Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence
-
DOI 10.1002/pmic.200300771
-
Blom, N.; Sicheritz-Ponten, T.; Gupta, R.; Gammeltoft, S.; Brunak, S. Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence Proteomics 2004, 4 (6) 1633-49 (Pubitemid 38738322)
-
(2004)
Proteomics
, vol.4
, Issue.6
, pp. 1633-1649
-
-
Blom, N.1
Sicheritz-Ponten, T.2
Gupta, R.3
Gammeltoft, S.4
Brunak, So.5
-
53
-
-
84989052470
-
Alpha-Cyano-4-Hydroxycinnamic Acid as a Matrix for Matrix-Assisted Laser Desorption Mass-Spectrometry
-
Beavis, R. C.; Chaudhary, T.; Chait, B. T. Alpha-Cyano-4-Hydroxycinnamic Acid as a Matrix for Matrix-Assisted Laser Desorption Mass-Spectrometry Org. Mass Spectrom. 1992, 27 (2) 156-8
-
(1992)
Org. Mass Spectrom.
, vol.27
, Issue.2
, pp. 156-8
-
-
Beavis, R.C.1
Chaudhary, T.2
Chait, B.T.3
-
54
-
-
0036605185
-
Analysis of protein phosphorylation using mass spectrometry: Deciphering the phosphoproteome
-
DOI 10.1016/S0167-7799(02)01944-3, PII S0167779902019443
-
Mann, M.; Ong, S. E.; Gronborg, M.; Steen, H.; Jensen, O. N.; Pandey, A. Analysis of protein phosphorylation using mass spectrometry: deciphering the phosphoproteome Trends Biotechnol. 2002, 20 (6) 261-8 (Pubitemid 34451062)
-
(2002)
Trends in Biotechnology
, vol.20
, Issue.6
, pp. 261-268
-
-
Mann, M.1
Ong, S.-E.2
Gronborg, M.3
Steen, H.4
Jensen, O.N.5
Pandey, A.6
-
55
-
-
55849122284
-
Evaluation of the utility of neutral-loss-dependent MS3 strategies in large-scale phosphorylation analysis
-
Villen, J.; Beausoleil, S. A.; Gygi, S. P. Evaluation of the utility of neutral-loss-dependent MS3 strategies in large-scale phosphorylation analysis Proteomics 2008, 8 (21) 4444-52
-
(2008)
Proteomics
, vol.8
, Issue.21
, pp. 4444-52
-
-
Villen, J.1
Beausoleil, S.A.2
Gygi, S.P.3
-
56
-
-
77954579848
-
Gas-phase rearrangements do not affect site localization reliability in phosphoproteomics data sets
-
Aguiar, M.; Haas, W.; Beausoleil, S. A.; Rush, J.; Gygi, S. P. Gas-phase rearrangements do not affect site localization reliability in phosphoproteomics data sets J. Proteome Res. 2010, 9 (6) 3103-7
-
(2010)
J. Proteome Res.
, vol.9
, Issue.6
, pp. 3103-7
-
-
Aguiar, M.1
Haas, W.2
Beausoleil, S.A.3
Rush, J.4
Gygi, S.P.5
-
57
-
-
24044467381
-
Quantification of gel-separated proteins and their phosphorylation sites by LC-MS using unlabeled internal standards
-
DOI 10.1074/mcp.M500078-MCP200
-
Cutillas, P. R.; Geering, B.; Waterfield, M. D.; Vanhaesebroeck, B. Quantification of gel-separated proteins and their phosphorylation sites by LC-MS using unlabeled internal standards: analysis of phosphoprotein dynamics in a B cell lymphoma cell line Mol. Cell. Proteomics 2005, 4 (8) 1038-51 (Pubitemid 41223364)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.8
, pp. 1038-1051
-
-
Cutillas, P.R.1
Geering, B.2
Waterfield, M.D.3
Vanhaesebroeck, B.4
-
58
-
-
0037795741
-
Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
-
DOI 10.1073/pnas.0832254100
-
Gerber, S. A.; Rush, J.; Stemman, O.; Kirschner, M. W.; Gygi, S. P. Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS Proc. Natl. Acad. Sci. U.S.A. 2003, 100 (12) 6940-5 (Pubitemid 36706372)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.12
, pp. 6940-6945
-
-
Gerber, S.A.1
Rush, J.2
Stemman, O.3
Kirschner, M.W.4
Gygi, S.P.5
-
59
-
-
4444371652
-
Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics
-
DOI 10.1038/nbt1005
-
Blagoev, B.; Ong, S. E.; Kratchmarova, I.; Mann, M. Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics Nat. Biotechnol. 2004, 22 (9) 1139-45 (Pubitemid 39166852)
-
(2004)
Nature Biotechnology
, vol.22
, Issue.9
, pp. 1139-1145
-
-
Blagoev, B.1
Ong, S.-E.2
Kratchmarova, I.3
Mann, M.4
-
60
-
-
33745159317
-
Ultrasensitive and absolute quantification of the phosphoinositide 3-kinase/Akt signal transduction pathway by mass spectrometry
-
DOI 10.1073/pnas.0602101103
-
Cutillas, P. R.; Khwaja, A.; Graupera, M.; Pearce, W.; Gharbi, S.; Waterfield, M.; Vanhaesebroeck, B. Ultrasensitive and absolute quantification of the phosphoinositide 3-kinase/Akt signal transduction pathway by mass spectrometry Proc. Natl. Acad. Sci. U.S.A. 2006, 103 (24) 8959-64 (Pubitemid 43902516)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.24
, pp. 8959-8964
-
-
Cutillas, P.R.1
Khwaja, A.2
Graupera, M.3
Pearce, W.4
Gharbi, S.5
Waterfield, M.6
Vanhaesebroeck, B.7
-
61
-
-
19944432197
-
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
-
Ross, P. L.; Huang, Y. N.; Marchese, J. N.; Williamson, B.; Parker, K.; Hattan, S.; Khainovski, N.; Pillai, S.; Dey, S.; Daniels, S.; Purkayastha, S.; Juhasz, P.; Martin, S.; Bartlet-Jones, M.; He, F.; Jacobson, A.; Pappin, D. J. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents Mol. Cell. Proteomics 2004, 3 (12) 1154-69
-
(2004)
Mol. Cell. Proteomics
, vol.3
, Issue.12
, pp. 1154-69
-
-
Ross, P.L.1
Huang, Y.N.2
Marchese, J.N.3
Williamson, B.4
Parker, K.5
Hattan, S.6
Khainovski, N.7
Pillai, S.8
Dey, S.9
Daniels, S.10
Purkayastha, S.11
Juhasz, P.12
Martin, S.13
Bartlet-Jones, M.14
He, F.15
Jacobson, A.16
Pappin, D.J.17
-
62
-
-
0034091753
-
Quantitative in vitro kinase reaction as a guide for phosphoprotein analysis by mass spectrometry
-
DOI 10.1002/(SICI)1097-0231(20000315)14:5<344::AID-RCM866>3.0.CO;2- W
-
Goodlett, D. R.; Aebersold, R.; Watts, J. D. Quantitative in vitro kinase reaction as a guide for phosphoprotein analysis by mass spectrometry Rapid Commun. Mass Spectrom. 2000, 14 (5) 344-8 (Pubitemid 30121469)
-
(2000)
Rapid Communications in Mass Spectrometry
, vol.14
, Issue.5
, pp. 344-348
-
-
Goodlett, D.R.1
Aebersold, R.2
Watts, J.D.3
-
63
-
-
40549130385
-
Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography
-
DOI 10.1002/pmic.200700884
-
Han, G.; Ye, M.; Zhou, H.; Jiang, X.; Feng, S.; Tian, R.; Wan, D.; Zou, H.; Gu, J. Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography Proteomics 2008, 8 (7) 1346-61 (Pubitemid 351518547)
-
(2008)
Proteomics
, vol.8
, Issue.7
, pp. 1346-1361
-
-
Han, G.1
Ye, M.2
Zhou, H.3
Jiang, X.4
Feng, S.5
Jiang, X.6
Tian, R.7
Wan, D.8
Zou, H.9
Gu, J.10
-
64
-
-
33750456519
-
Global, In Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks
-
DOI 10.1016/j.cell.2006.09.026, PII S0092867406012748
-
Olsen, J. V.; Blagoev, B.; Gnad, F.; Macek, B.; Kumar, C.; Mortensen, P.; Mann, M. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks Cell 2006, 127 (3) 635-48 (Pubitemid 44647421)
-
(2006)
Cell
, vol.127
, Issue.3
, pp. 635-648
-
-
Olsen, J.V.1
Blagoev, B.2
Gnad, F.3
Macek, B.4
Kumar, C.5
Mortensen, P.6
Mann, M.7
-
65
-
-
33748350921
-
Structure of archaeal translational initiation factor 2 βγ-GDP reveals significant conformational change of the β-subunit and switch 1 region
-
DOI 10.1073/pnas.0604165103
-
Sokabe, M.; Yao, M.; Sakai, N.; Toya, S.; Tanaka, I. Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region Proc. Natl. Acad. Sci. U.S.A. 2006, 103 (35) 13016-21 (Pubitemid 44338909)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.35
, pp. 13016-13021
-
-
Sokabe, M.1
Yao, M.2
Sakai, N.3
Toya, S.4
Tanaka, I.5
-
66
-
-
28544439977
-
Molecular biology: Structural roles for human translation factor elF3 in initiation of protein synthesis
-
DOI 10.1126/science.1118977
-
Siridechadilok, B.; Fraser, C. S.; Hall, R. J.; Doudna, J. A.; Nogales, E. Structural roles for human translation factor eIF3 in initiation of protein synthesis Science 2005, 310 (5753) 1513-5 (Pubitemid 41746350)
-
(2005)
Science
, vol.310
, Issue.5753
, pp. 1513-1515
-
-
Siridechadilok, B.1
Fraser, C.S.2
Hall, R.J.3
Doudna, J.A.4
Nogales, E.5
-
67
-
-
57449083256
-
Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3
-
Zhou, M.; Sandercock, A. M.; Fraser, C. S.; Ridlova, G.; Stephens, E.; Schenauer, M. R.; Yokoi-Fong, T.; Barsky, D.; Leary, J. A.; Hershey, J. W.; Doudna, J. A.; Robinson, C. V. Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3 Proc. Natl. Acad. Sci. U.S.A. 2008, 105 (47) 18139-44
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, Issue.47
, pp. 18139-44
-
-
Zhou, M.1
Sandercock, A.M.2
Fraser, C.S.3
Ridlova, G.4
Stephens, E.5
Schenauer, M.R.6
Yokoi-Fong, T.7
Barsky, D.8
Leary, J.A.9
Hershey, J.W.10
Doudna, J.A.11
Robinson, C.V.12
-
68
-
-
77957222382
-
Distinct regions of human eIF3 are sufficient for binding to the HCV IRES and the 40S ribosomal subunit
-
Cai, Q.; Todorovic, A.; Andaya, A.; Gao, J.; Leary, J. A.; Cate, J. H. Distinct regions of human eIF3 are sufficient for binding to the HCV IRES and the 40S ribosomal subunit J. Mol. Biol. 2010, 403 (2) 185-96
-
(2010)
J. Mol. Biol.
, vol.403
, Issue.2
, pp. 185-96
-
-
Cai, Q.1
Todorovic, A.2
Andaya, A.3
Gao, J.4
Leary, J.A.5
Cate, J.H.6
|