X-ray Structure of Translation Initiation Factor eIF2γ: Implications for tRNA and eIF2α binding

Journal of Biological Chemistry

Volumn 279, Issue 11, 2004, Pages 10634-10642

  Roll Mecak, Antonina ^a   Alone, Pankaj ^b   Cao, Chune ^b   Dever, Thomas E ^b   Burley, Stephen K ^a,c  

^a ROCKEFELLER UNIVERSITY   (United States)

^b EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH AND HUMAN DEVELOPMENT   (United States)

^c ELI LILLY AND COMPANY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENES; RNA; X RAYS;

ZINC RIBBON MOTIF;

BIOCHEMISTRY;

GUANOSINE TRIPHOSPHATASE; INITIATION FACTOR 2; INITIATION FACTOR 2 GAMMA; METHIONINE; TRANSFER RNA; UNCLASSIFIED DRUG;

ALPHA CHAIN; ANIMAL CELL; ARTICLE; BASE PAIRING; CELL VIABILITY; COMPLEX FORMATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN PHOSPHORYLATION; RIBOSOME SUBUNIT; RNA BINDING; SITE DIRECTED MUTAGENESIS; START CODON; TRANSLATION INITIATION; X RAY ANALYSIS; ZINC FINGER MOTIF;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ARCHAEA; CRYSTALLOGRAPHY, X-RAY; EUKARYOTIC INITIATION FACTOR-2; METHANOCOCCUS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; PLASMIDS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; RNA, TRANSFER; RNA, TRANSFER, MET; SEQUENCE HOMOLOGY, AMINO ACID;

ANIMALIA;

EID: 1642304746     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M310418200     Document Type: Article

References (36)

1. Roll-Mecak, A., Shin, B. S., Dever, T. E., and Burley, S. K. (2001) Trends Biochem. Sci. 26, 705-709
2. Hinnebusch, A. G. (2000) in Translational Control of Gene Expression (Sonenberg, N., Hershey, J. W. B., and Mathews, M. B., eds) pp. 185-245, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
3. Kyrpides, N. C., and Woese, C. B. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 3726-3730
4. Trachsel, H. (1996) in Translational Control (Hershey, J. W. B., Mathews, M. B., and Sonenberg, N., eds) pp. 113-138, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
5. Das, S., Maiti, T., Das, K., and Maitra, U. (1997) J. Biol. Chem. 272, 31712-31718
6. Laurino, J. P., Thompson, G. M., Pacheco, E., and Castilho, B. A. (1999) Mol. Cell. Biol. 19, 173-181
7. Sander, C., and Schneider, R. (1991) Proteins 9, 56-68
8. Erickson, F. L., and Hannig, E. M. (1996) EMBO J. 15, 6311-6320
9. Schmitt, E., Blanquet, S., and Mechulam, Y. (2002) EMBO J. 21, 1821-1832
10. Erickson, F. L., Harding, L. D., Dorris, D. R., and Hannig, E. M. (1997) Mol. Gen. Genet. 253, 711-719
11. Hendrickson, W. (1991) Science 254, 51-58
12. Rice, L. M., Earnest, T. N., and Brunger, A. T. (2000) Acta Crystallogr. Sect. D Biol. Crystallogr. 56, 1413-1420
13. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
14. Weeks, C., and Miller, R. (1999) J. Appl. Crystallogr. 32, 120-124
15. de La Fortelle, E., and Bricogne, G. (1997) Methods Enzymol. 276, 472-494
16. Jones, T. A., Zou, J. Y., Cowan, S. W., and Kjeldgaard, M. (1991) Acta Crystallogr. Sect. A 47, 110-119
17. Brünger, A., Adams, P. D., Clore, G. M., Gros, P., Grosse-Kuntsleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., and Read, R. J. (1998) Acta Crystallogr. Sect. D 54, 905-992
18. Laskowski, R. J., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-290
19. Harashima, S., and Hinnebusch, A. G. (1986) Mol. Cell. Biol. 6, 3990-3998
20. Dever, T. E., Yang, W., Astrom, S., Bystrom, A. S., and Hinnebusch, A. G. (1995) Mol. Cell. Biol. 15, 6351-6363
21. Boeke, J. D., Trueheart, J., Natsoulis, G., and Fink, G. R. (1987) Methods Enzymol. 154, 164-175
22. Dever, T. E., Feng, L., Wek, R. C., Cigan, A. M., Donahue, T. F., and Hinnebusch, A. G. (1992) Cell 68, 585-596
23. Sherman, F., Fink, G. R., and Lawrence, C. W. (1974) Methods in Yeast Genetics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
24. Sprang, S. R. (1997) Annu. Rev. Biochem. 66, 639-678
25. Krishna, S. S., Majumdar, I., and Grishin, N. V. (2003) Nucleic Acids Res. 31, 532-550
26. Nissen, P., Kjeldgaard, M., Thirup, S., Polekhina, G., Reshetnikova, L., Clark, B. F., and Nyborg, J. (1995) Science 270, 1464-1472
27. Spurio, R., Brandi, L., Caserta, E., Pon, C. L., Gualerzi, C. O., Misselwitz, R., Krafft, C., Welfle, K., and Welfle, H. (2000) J. Biol. Chem. 275, 2447-2454
28. Roll-Mecak, A., Cao, C., Dever, T. E., and Burley, S. K. (2000) Cell 103, 781-792
29. Berchtold, H., Reshetnikova, L., Reiser, C. O., Schirmer, N. K., Sprinzl, M., and Hilgenfeld, R. (1993) Nature 365, 126-132
30. Kjeldgaard, M., and Nyborg, J. (1992) J. Mol. Biol. 223, 721-742
31. Andersen, G. R., Thirup, S., Spremulli, L. L., and Nyborg, J. (2000) J. Mol. Biol. 297, 421-436
32. Dorris, D. R., Erickson, F. L., and Hannig, E. M. (1995) EMBO J. 14, 2239-2249
33. Nika, J., Rippel, S., and Hannig, E. M. (2001) J. Biol. Chem. 276, 1051-1056
34. Erickson, F. L., Nika, J., Rippel, S., and Hannig, E. M. (2001) Genetics 158, 123-132
35. Nicholls, A., Sharp, K., and Honig, B. (1991) Proteins 11, 281-296
36. Gilson, M., Sharp, K., and Honig, B. (1988) J. Comp. Chem. 9, 327-335