메뉴 건너뛰기




Volumn 22, Issue 9, 2004, Pages 1139-1145

Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics

Author keywords

[No Author keywords available]

Indexed keywords

EPIDERMAL GROWTH; PROTEOMES; QUANTITATIVE PROTEOMICS; TEMPORAL ANALYSIS;

EID: 4444371652     PISSN: 10870156     EISSN: None     Source Type: Journal    
DOI: 10.1038/nbt1005     Document Type: Article
Times cited : (598)

References (34)
  • 1
    • 0037453510 scopus 로고    scopus 로고
    • Assembly of cell regulatory systems through protein interaction domains
    • Pawson, T. & Nash, P. Assembly of cell regulatory systems through protein interaction domains. Science 300, 445-452 (2003).
    • (2003) Science , vol.300 , pp. 445-452
    • Pawson, T.1    Nash, P.2
  • 2
    • 0034644539 scopus 로고    scopus 로고
    • Cell signaling by receptor tyrosine kinases
    • Schlessinger, J. Cell signaling by receptor tyrosine kinases. Cell 103, 211-225 (2000).
    • (2000) Cell , vol.103 , pp. 211-225
    • Schlessinger, J.1
  • 3
    • 0035902180 scopus 로고    scopus 로고
    • Oncogenic kinase signalling
    • Blume-Jensen, P. & Hunter, T. Oncogenic kinase signalling. Nature 411, 355-365 (2001).
    • (2001) Nature , vol.411 , pp. 355-365
    • Blume-Jensen, P.1    Hunter, T.2
  • 4
    • 0036198435 scopus 로고    scopus 로고
    • Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae
    • Ficarro, S.B. et al. Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae. Nat. Biotechnol. 20, 301-305 (2002).
    • (2002) Nat. Biotechnol. , vol.20 , pp. 301-305
    • Ficarro, S.B.1
  • 5
    • 0037458030 scopus 로고    scopus 로고
    • Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry
    • Salomon, A.R. et al. Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry. Proc. Natl. Acad. Sci. USA 100, 443-448 (2003).
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 443-448
    • Salomon, A.R.1
  • 6
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi, S.P. et al. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17, 994-999 (1999).
    • (1999) Nat. Biotechnol. , vol.17 , pp. 994-999
    • Gygi, S.P.1
  • 7
    • 0043198426 scopus 로고    scopus 로고
    • Proteomic tools for quantitation by mass spectrometry
    • Lill, J. Proteomic tools for quantitation by mass spectrometry. Mass Spectrom. Rev. 22, 182-194 (2003).
    • (2003) Mass Spectrom. Rev. , vol.22 , pp. 182-194
    • Lill, J.1
  • 8
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • Aebersold, R. & Mann, M. Mass spectrometry-based proteomics. Nature 422, 198-207 (2003).
    • (2003) Nature , vol.422 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 9
    • 0037370399 scopus 로고    scopus 로고
    • The study of macromolecular complexes by quantitative proteomics
    • Ranish, J.A. et al. The study of macromolecular complexes by quantitative proteomics. Nat. Genet. 33, 349-355 (2003).
    • (2003) Nat. Genet. , vol.33 , pp. 349-355
    • Ranish, J.A.1
  • 10
    • 0037337310 scopus 로고    scopus 로고
    • A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling
    • Blagoev, B. et al. A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling. Nat. Biotechnol. 21, 315-318 (2003).
    • (2003) Nat. Biotechnol. , vol.21 , pp. 315-318
    • Blagoev, B.1
  • 11
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    • Ong, S.E. et al. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell. Proteomics 1, 376-386 (2002).
    • (2002) Mol. Cell. Proteomics , vol.1 , pp. 376-386
    • Ong, S.E.1
  • 12
    • 0012351964 scopus 로고    scopus 로고
    • Properties of 13C-substituted arginine in stable isotope labeling by amino acids in cell culture (SILAC)
    • Ong, S.E., Kratchmarova, I. & Mann, M. Properties of 13C-substituted arginine in stable isotope labeling by amino acids in cell culture (SILAC). J. Proteome Res. 2, 173-181 (2003).
    • (2003) J. Proteome Res. , vol.2 , pp. 173-181
    • Ong, S.E.1    Kratchmarova, I.2    Mann, M.3
  • 13
    • 0034624002 scopus 로고    scopus 로고
    • Identification of a novel immunoreceptor tyrosine-based activation motif-containing molecule, STAM 2, by mass spectrometry and its involvement in growth factor and cytokine receptor signaling pathways
    • Pandey, A. et al. Identification of a novel immunoreceptor tyrosine-based activation motif-containing molecule, STAM2, by mass spectrometry and its involvement in growth factor and cytokine receptor signaling pathways. J. Biol. Chem. 275, 38633-38639 (2000).
    • (2000) J. Biol. Chem. , vol.275 , pp. 38633-38639
    • Pandey, A.1
  • 14
    • 0034602654 scopus 로고    scopus 로고
    • Analysis of receptor signaling pathways by mass spectrometry: Identification of vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors
    • Pandey, A. et al. Analysis of receptor signaling pathways by mass spectrometry: identification of vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors. Proc. Natl. Acad. Sci. USA 97, 179-184 (2000).
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 179-184
    • Pandey, A.1
  • 15
    • 0037079239 scopus 로고    scopus 로고
    • Cloning of a novel phosphotyrosine binding domain containing molecule, Odin, involved in signaling by receptor tyrosine kinases
    • Pandey, A. et al. Cloning of a novel phosphotyrosine binding domain containing molecule, Odin, involved in signaling by receptor tyrosine kinases. Oncogene 21, 8029-8036 (2002).
    • (2002) Oncogene , vol.21 , pp. 8029-8036
    • Pandey, A.1
  • 16
    • 0035895664 scopus 로고    scopus 로고
    • Molecular mechanisms underlying endocytosis and sorting of ErbB receptor tyrosine kinases
    • Waterman, H. & Yarden, Y. Molecular mechanisms underlying endocytosis and sorting of ErbB receptor tyrosine kinases. FEBS Lett. 490, 142-152 (2001).
    • (2001) FEBS Lett. , vol.490 , pp. 142-152
    • Waterman, H.1    Yarden, Y.2
  • 18
    • 0038323973 scopus 로고    scopus 로고
    • STAM and Hrs are subunits of a multivalent ubiquitin-binding complex on early endosomes
    • Bache, K.G., Raiborg, C., Mehlum, A. & Stenmark, H. STAM and Hrs are subunits of a multivalent ubiquitin-binding complex on early endosomes. J. Biol. Chem. 278, 12513-12521 (2003).
    • (2003) J. Biol. Chem. , vol.278 , pp. 12513-12521
    • Bache, K.G.1    Raiborg, C.2    Mehlum, A.3    Stenmark, H.4
  • 19
    • 0029939164 scopus 로고    scopus 로고
    • SOS phosphorylation and disassociation of the Grb2-SOS complex by the ERK and JNK signaling pathways
    • Dong, C., Waters, S.B., Holt, K.H. & Pessin, J.E. SOS phosphorylation and disassociation of the Grb2-SOS complex by the ERK and JNK signaling pathways. J. Biol. Chem. 271, 6328-6332 (1996).
    • (1996) J. Biol. Chem. , vol.271 , pp. 6328-6332
    • Dong, C.1    Waters, S.B.2    Holt, K.H.3    Pessin, J.E.4
  • 20
    • 12244289640 scopus 로고    scopus 로고
    • Gelsolin-induced epithelial cell invasion is dependent on Ras-Rac signaling
    • De Corte, V. et al. Gelsolin-induced epithelial cell invasion is dependent on Ras-Rac signaling. EMBO J. 21, 6781-6790 (2002).
    • (2002) EMBO J. , vol.21 , pp. 6781-6790
    • De Corte, V.1
  • 21
    • 0041845239 scopus 로고    scopus 로고
    • Synergistic promotion of c-Src activation and cell migration by Cas and AND-34/BCAR 3
    • Riggins, R.B., Quilliam, L.A. & Bouton, A.H. Synergistic promotion of c-Src activation and cell migration by Cas and AND-34/BCAR3. J. Biol. Chem. 278, 28264-28273 (2003).
    • (2003) J. Biol. Chem. , vol.278 , pp. 28264-28273
    • Riggins, R.B.1    Quilliam, L.A.2    Bouton, A.H.3
  • 22
    • 0034684997 scopus 로고    scopus 로고
    • BCAR1 a human homologue of the adapter protein p130Cas, and antiestrogen resistance in breast cancer cells
    • Brinkman, A., van der Flier, S., Kok, E.M. & Dorssers, L.C. BCAR1 a human homologue of the adapter protein p130Cas, and antiestrogen resistance in breast cancer cells. J. Natl. Cancer Inst. 92, 112-120 (2000).
    • (2000) J. Natl. Cancer Inst. , vol.92 , pp. 112-120
    • Brinkman, A.1    Van Der Flier, S.2    Kok, E.M.3    Dorssers, L.C.4
  • 23
    • 0032525138 scopus 로고    scopus 로고
    • Identification of BCAR 3 by a random search for genes involved in antiestrogen resistance of human breast cancer cells
    • van Agthoven, T. et al. Identification of BCAR3 by a random search for genes involved in antiestrogen resistance of human breast cancer cells. EMBO J. 17, 2799-2808 (1998).
    • (1998) EMBO J. , vol.17 , pp. 2799-2808
    • Van Agthoven, T.1
  • 24
    • 0036276219 scopus 로고    scopus 로고
    • c-Src-mediated phosphorylation of hnRNP K drives translational activation of specifically silenced mRNAs
    • Ostareck-Lederer, A. et al. c-Src-mediated phosphorylation of hnRNP K drives translational activation of specifically silenced mRNAs. Mol. Cell. Biol. 22, 4535-4543 (2002).
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 4535-4543
    • Ostareck-Lederer, A.1
  • 25
    • 0034004352 scopus 로고    scopus 로고
    • The LIM domain: Regulation by association
    • Bach, I. The LIM domain: regulation by association. Mech. Dev. 91, 5-17 (2000).
    • (2000) Mech. Dev. , vol.91 , pp. 5-17
    • Bach, I.1
  • 26
    • 0030054916 scopus 로고    scopus 로고
    • Specificity of LIM domain interactions with receptor tyrosine kinases
    • Wu, R. et al. Specificity of LIM domain interactions with receptor tyrosine kinases. J. Biol. Chem. 271, 15934-15941 (1996).
    • (1996) J. Biol. Chem. , vol.271 , pp. 15934-15941
    • Wu, R.1
  • 27
    • 0037169504 scopus 로고    scopus 로고
    • 'Srcasm: A novel Src activating and signaling molecule
    • Seykora, J.T., Mei, L., Dotto, G.P. & Stein, P.L. 'Srcasm: a novel Src activating and signaling molecule. J. Biol. Chem. 277, 2812-2822 (2002).
    • (2002) J. Biol. Chem. , vol.277 , pp. 2812-2822
    • Seykora, J.T.1    Mei, L.2    Dotto, G.P.3    Stein, P.L.4
  • 29
    • 0042467558 scopus 로고    scopus 로고
    • CYLD is a deubiquitinating enzyme that negatively regulates NF-kappaB activation by TNFR family members
    • Trompouki, E. et al. CYLD is a deubiquitinating enzyme that negatively regulates NF-kappaB activation by TNFR family members. Nature 424, 793-796 (2003).
    • (2003) Nature , vol.424 , pp. 793-796
    • Trompouki, E.1
  • 30
    • 0041967054 scopus 로고    scopus 로고
    • The tumour suppressor CYLD negatively regulates NF-kappaB signalling by deubiquitination
    • Kovalenko, A. et al. The tumour suppressor CYLD negatively regulates NF-kappaB signalling by deubiquitination. Nature 424, 801-805 (2003).
    • (2003) Nature , vol.424 , pp. 801-805
    • Kovalenko, A.1
  • 31
    • 0042467554 scopus 로고    scopus 로고
    • Loss of the cylindromatosis tumour suppressor inhibits apoptosis by activating NF-kappaB
    • Brummelkamp, T.R., Nijman, S.M., Dirac, A.M. & Bernards, R. Loss of the cylindromatosis tumour suppressor inhibits apoptosis by activating NF-kappaB. Nature 424, 797-801 (2003).
    • (2003) Nature , vol.424 , pp. 797-801
    • Brummelkamp, T.R.1    Nijman, S.M.2    Dirac, A.M.3    Bernards, R.4
  • 32
    • 0037213006 scopus 로고    scopus 로고
    • Computational modeling of the EGF-receptor system: A paradigm for systems biology
    • Wiley, H.S., Shvartsman, S.Y. & Lauffenburger, D.A. Computational modeling of the EGF-receptor system: a paradigm for systems biology. Trends Cell Biol. 13, 43-50 (2003).
    • (2003) Trends Cell Biol. , vol.13 , pp. 43-50
    • Wiley, H.S.1    Shvartsman, S.Y.2    Lauffenburger, D.A.3
  • 33
    • 0029927505 scopus 로고    scopus 로고
    • Mass spectrometric sequencing of proteins from silver stained polyacrylamide gels
    • Shevchenko, A., Wilm, M., Vorm, O. & Mann, M. Mass spectrometric sequencing of proteins from silver stained polyacrylamide gels. Anal. Chem. 68, 850-858 (1996).
    • (1996) Anal. Chem. , vol.68 , pp. 850-858
    • Shevchenko, A.1    Wilm, M.2    Vorm, O.3    Mann, M.4
  • 34
    • 0037317228 scopus 로고    scopus 로고
    • Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics
    • Rappsilber, J., Ishihama, Y. & Mann, M. Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics. Anal. Chem. 75, 663-670 (2003).
    • (2003) Anal. Chem. , vol.75 , pp. 663-670
    • Rappsilber, J.1    Ishihama, Y.2    Mann, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.