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Volumn 39, Issue 15, 2011, Pages 6789-6801

Characterization of DNA with an 8-oxoguanine modification

Author keywords

[No Author keywords available]

Indexed keywords

8 HYDROXYDEOXYGUANOSINE TRIPHOSPHATE; 8 HYDROXYGUANINE; 8 OXOGUANINE DNA GLYCOSYLASE; CATION; DNA; DNA GLYCOSYLTRANSFERASE; GENOMIC DNA; GUANOSINE TRIPHOSPHATE DERIVATIVE; OLIGODEOXYNUCLEOTIDE; REACTIVE OXYGEN METABOLITE; UNCLASSIFIED DRUG; 8-HYDROXYGUANINE; DRUG DERIVATIVE; GUANINE; OLIGONUCLEOTIDE; SODIUM CHLORIDE; WATER;

EID: 80053430732     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr275     Document Type: Article
Times cited : (67)

References (75)
  • 1
    • 0021921097 scopus 로고
    • Formation of an 8-hydroxyguanine moiety in deoxyribonucleic acid on γ-irradiation in aqueous solution
    • DOI 10.1021/bi00337a032
    • Dizdaroglu, M. (1985) Formation of an 8-hydroxyguanine moiety in deoxyribonucleic acid on gamma-irradiation in aqueous solution. Biochemistry, 30, 4476-4481. (Pubitemid 15228454)
    • (1985) Biochemistry , vol.24 , Issue.16 , pp. 4476-4481
    • Dizdaroglu, M.1
  • 2
    • 0022556814 scopus 로고
    • Hydroxylation of guanine in nucleosides and DNA at the C-8 position by heated glucose and oxygen radical-forming agents
    • Kasai, H. and Nishimura, S. (1986) Hydroxylation of guanine in nucleosides and DNA at the C-8 position by heated glucose and oxygen radical-forming agents. Environ. Health Perspect., 67, 111-116. (Pubitemid 16041377)
    • (1986) Environmental Health Perspectives , vol.67 , pp. 111-116
    • Kasai, H.1    Nishimura, S.2
  • 3
    • 0022809670 scopus 로고
    • Formation of 8-hydroxyguanine moiety in cellular DNA by agents producing oxygen radicals and evidence for its repair
    • Kasai, H., Crain, P.F., Kuchino, Y., Nishimura, S., Ootsuyama, A. and Tanooka, H. (1986) Formation of 8-hydroxyguanine moiety in cellular DNA by agents producing oxygen radicals and evidence for its repair. Carcinogenesis, 7, 1849-1851.
    • (1986) Carcinogenesis , vol.7 , pp. 1849-1851
    • Kasai, H.1    Crain, P.F.2    Kuchino, Y.3    Nishimura, S.4    Ootsuyama, A.5    Tanooka, H.6
  • 4
    • 0030971290 scopus 로고    scopus 로고
    • Formation of 8-hydroxy-2'-deoxyguanosine following treatment of 2'-deoxyguanosine or DNA by hydrogen peroxide or glutathione
    • DOI 10.1016/S0165-1218(96)00164-4, PII S1383571896001644
    • Abu-Shakra, A. and Zeiger, E. (1997) Formation of 8-hydroxy-20- deoxyguanosine following treatment of 20-deoxyguanosine or DNA by hydrogen peroxide or glutathione. Mutat. Res., 390, 45-50. (Pubitemid 27230208)
    • (1997) Mutation Research - Genetic Toxicology and Environmental Mutagenesis , vol.390 , Issue.1-2 , pp. 45-50
    • Abu-Shakra, A.1    Zeiger, E.2
  • 7
    • 0025334691 scopus 로고
    • Mechanistic studies of ionizing radiation and oxidative mutagenesis: Genetic effects of a single 8-hydroxyguanine (7-hydro-8-oxoguanine) residue inserted at a unique site in a viral genome
    • DOI 10.1021/bi00482a011
    • Wood, M.L., Dizdaroglu, M., Gajewski, E. and Essigmann, J.M. (1990) Mechanistic studies of ionizing radiation and oxidative mutagenesis: genetic effects of a single 8-hydroxyguanine (7-hydro-8-oxoguanine) residue inserted at a unique site in a viral genome. Biochemistry, 29, 7024-7032. (Pubitemid 20241148)
    • (1990) Biochemistry , vol.29 , Issue.30 , pp. 7024-7032
    • Wood, M.L.1    Dizdaroglu, M.2    Gajewski, E.3    Essigmann, J.M.4
  • 9
    • 0032884691 scopus 로고    scopus 로고
    • Thermolabile 8-hydroxyguanine DNA glycosylase with low activity in senescence accelerated mice due to a single-base mutation
    • Choi, J.Y., Kim, H.S., Kang, H.K., Lee, D.W., Choi, E.M. and Chung, M.H. (1999) Thermolabile 8-hydroxyguanine DNA glycosylase with low activity in senescence accelerated mice due to a single-base mutation. Free Radical Biol. Med., 27, 848-854.
    • (1999) Free Radical Biol. Med. , vol.27 , pp. 848-854
    • Choi, J.Y.1    Kim, H.S.2    Kang, H.K.3    Lee, D.W.4    Choi, E.M.5    Chung, M.H.6
  • 10
    • 0025981359 scopus 로고
    • Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG
    • Shibutani, S., Takeshita, M. and Grollman, A.P. (1991) Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG. Nature, 349, 431-434. (Pubitemid 21926107)
    • (1991) Nature , vol.349 , Issue.6308 , pp. 431-434
    • Shibutani, S.1    Takeshita, M.2    Grollman, A.P.3
  • 13
    • 0037196072 scopus 로고    scopus 로고
    • Efficiency, specificity and DNA polymerase-dependence of translesion replication across the oxidative DNA lesion 8-oxoguanine in human cells
    • PII S0027510702002543
    • Avkin, S. and Livneh, Z. (2002) Efficiency, specificity and DNA polymerase-dependence of translesion replication across the oxidative DNA lesion 8-oxoguanine in human cells. Mutat. Res., 510, 81-90. (Pubitemid 35379888)
    • (2002) Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis , vol.510 , Issue.1-2 , pp. 81-90
    • Avkin, S.1    Livneh, Z.2
  • 14
    • 0037313816 scopus 로고    scopus 로고
    • 6-methylguanine
    • DOI 10.1128/MCB.23.4.1453-1459.2003
    • Haracska, L., Prakash, S. and Prakash, L. (2003) Yeast DNA polymerase zeta is an efficient extender of primer ends opposite from 7, 8-dihydro-8-Oxoguanine and O6-methylguanine. Mol. Cell Biol., 23, 1453-1459. (Pubitemid 36177052)
    • (2003) Molecular and Cellular Biology , vol.23 , Issue.4 , pp. 1453-1459
    • Haracska, L.1    Prakash, S.2    Prakash, L.3
  • 15
    • 34249870372 scopus 로고    scopus 로고
    • 8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins
    • DOI 10.1038/nature05843, PII NATURE05843
    • Maga, G., Villani, G., Crespan, E., Wimmer, U., Ferrari, E., Bertocci, B. and Hübscher, U. (2007) 8-Oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins. Nature, 447, 606-608. (Pubitemid 46868042)
    • (2007) Nature , vol.447 , Issue.7144 , pp. 606-608
    • Maga, G.1    Villani, G.2    Crespan, E.3    Wimmer, U.4    Ferrari, E.5    Bertocci, B.6    Hubscher, U.7
  • 16
    • 0026486615 scopus 로고
    • Hydrolytic elimination of a mutagenic nucleotide, 8-oxodGTP, by human 18-kilodalton protein: Sanitization of nucleotide pool
    • Mo, J.Y., Maki, H. and Sekiguchi, M. (1992) Hydrolytic elimination of a mutagenic nucleotide, 8-oxodGTP, by human 18-kilodalton protein: sanitization of nucleotide pool. Proc. Natl Acad. Sci. USA, 89, 11021-11025.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 11021-11025
    • Mo, J.Y.1    Maki, H.2    Sekiguchi, M.3
  • 17
    • 0028933674 scopus 로고
    • Functional cooperation of MutT MutM and MutY proteins in preventing mutations caused by spontaneous oxidation of guanine nucleotide in Escherichia coli
    • Tajiri, T., Maki, H. and Sekiguchi, M. (1995) Functional cooperation of MutT, MutM and MutY proteins in preventing mutations caused by spontaneous oxidation of guanine nucleotide in Escherichia coli. Mutat. Res., 336, 257-267.
    • (1995) Mutat. Res. , vol.336 , pp. 257-267
    • Tajiri, T.1    Maki, H.2    Sekiguchi, M.3
  • 19
    • 0032533794 scopus 로고    scopus 로고
    • The presence of two distinct 8-oxoguanine repair enzymes in human cells: Their potential complementary roles in preventing mutation
    • Hazra, T.K., Izumi, T., Maidt, L., Floyd, R.A. and Mitra, S. (1998) The presence of two distinct 8-oxoguanine repair enzymes in human cells: their potential complementary roles in preventing mutation. Nucleic Acids Res., 26, 5116-5122. (Pubitemid 28517567)
    • (1998) Nucleic Acids Research , vol.26 , Issue.22 , pp. 5116-5122
    • Hazra, T.K.1    Izumi, T.2    Maidt, L.3    Floyd, R.A.4    Mitra, S.5
  • 20
    • 0029896229 scopus 로고    scopus 로고
    • Cloning and expression in E. Coli of the OGG1 gene of S. cereÍisiae which codes for a DNA glycosylase that excises 7, 8-dihydro-8-oxoguanine and 2, 6-diamino-4-hydroxy-5-N-methylformamidopyrimidine
    • Auffret van der Kemp, P., Thomas, D., Barbey, R.R., DeOliveira, R. and Boiteux, S. (1996) Cloning and expression in E. coli of the OGG1 gene of S. cereÍisiae which codes for a DNA glycosylase that excises 7, 8-dihydro-8-oxoguanine and 2, 6-diamino-4-hydroxy-5-N-methylformamidopyrimidine. Proc. Natl Acad. Sci. USA, 93, 5197-5202.
    • (1996) Proc. Natl Acad. Sci. USA , vol.93 , pp. 5197-5202
    • Der Van Kemp, P.A.1    Thomas, D.2    Barbey, R.R.3    Deoliveira, R.4    Boiteux, S.5
  • 22
    • 0034708226 scopus 로고    scopus 로고
    • Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA
    • DOI 10.1038/35002510
    • Bruner, S.D., Norman, D.P. and Verdine, G.L. (2000) Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA. Nature, 403, 859-866. (Pubitemid 30130980)
    • (2000) Nature , vol.403 , Issue.6772 , pp. 859-866
    • Bruner, S.D.1    Norman, D.P.G.2    Verdine, G.L.3
  • 23
    • 34250900982 scopus 로고    scopus 로고
    • Base-excision repair of oxidative DNA damage
    • DOI 10.1038/nature05978, PII NATURE05978
    • David, S.S, O'Shea, V.L. and Kundu, S. (2007) Base-excision repair of oxidative DNA damage. Nature, 447, 941-950. (Pubitemid 46975761)
    • (2007) Nature , vol.447 , Issue.7147 , pp. 941-950
    • David, S.S.1    O'Shea, V.L.2    Kundu, S.3
  • 25
    • 3042631024 scopus 로고    scopus 로고
    • Gene regulation and DNA damage in the ageing human brain
    • DOI 10.1038/nature02661
    • Lu, T., Pan, Y., Kao, S.Y., Li, C., Kohane, I., Chan, J. and Yankner, B.A. (2004) Gene regulation and DNA damage in the ageing human brain. Nature, 429, 883-891. (Pubitemid 38843301)
    • (2004) Nature , vol.429 , Issue.6994 , pp. 883-891
    • Lu, T.1    Pan, Y.2    Kao, S.-Y.3    Li, C.4    Kohane, I.5    Chan, J.6    Yankner, B.A.7
  • 26
    • 0036814964 scopus 로고    scopus 로고
    • Mitochondrial repair of 8-oxoguanine and changes with aging
    • DOI 10.1016/S0531-5565(02)00142-0, PII S0531556502001420
    • Stevnsner, T., Thorslund, T., de Souza-Pinto, N.C. and Bohr, V.A. (2002) Mitochondrial repair of 8-oxoguanine and changes with aging. Exp. Gerontol., 37, 1189-1196. (Pubitemid 35418276)
    • (2002) Experimental Gerontology , vol.37 , Issue.10-11 , pp. 1189-1196
    • Stevnsner, T.1    Thorslund, T.2    De Souza-Pinto, N.C.3    Bohr, V.A.4
  • 27
    • 47849100494 scopus 로고    scopus 로고
    • Mechanism of oxidative DNA damage repair and relevance to human pathology
    • D'Errico, M., Parlanti, E. and Dogliotti, E. (2008) Mechanism of oxidative DNA damage repair and relevance to human pathology. Mutat Res., 659, 4-14.
    • (2008) Mutat Res. , vol.659 , pp. 4-14
    • D'errico, M.1    Parlanti, E.2    Dogliotti, E.3
  • 28
    • 34250900982 scopus 로고    scopus 로고
    • Base-excision repair of oxidative DNA damage
    • DOI 10.1038/nature05978, PII NATURE05978
    • David, S.S., O'Shea, V.L. and Kundu, S. (2007) Base-excision repair of oxidative DNA damage. Nature, 447, 941-950. (Pubitemid 46975761)
    • (2007) Nature , vol.447 , Issue.7147 , pp. 941-950
    • David, S.S.1    O'Shea, V.L.2    Kundu, S.3
  • 32
    • 0028783875 scopus 로고
    • Influence of the oxidatively damaged adduct 8-oxodeoxyguanosine on the conformation, energetics, and thermodynamic stability of a DNA duplex
    • Plum, G.E., Grollman, A.P., Johnson, F. and Breslauer, K.J. (1995) Influence of the oxidatively damaged adduct 8-oxodeoxyguanosine on the conformation, energetics, and thermodynamic stability of a DNA duplex. Biochemistry, 34, 16148-16160.
    • (1995) Biochemistry , vol.34 , pp. 16148-16160
    • Plum, G.E.1    Grollman, A.P.2    Johnson, F.3    Breslauer, K.J.4
  • 33
    • 0027425942 scopus 로고
    • Base pairing of 8-oxoguanosine and 8-oxo-2'-deoxyguanosine with 2'- deoxyadenosine, 2'-deoxycytosine, 2'-deoxyguanosine, and thymidine
    • Gannett, P.M. and Sura, T.P. (1993) Base pairing of 8-oxoguanosine and 8-oxo-20-deoxyguanosine with 20-deoxyadenosine, 20-deoxycytosine, 20-deoxyguanosine, and thymidine. Chem. Res. Toxicol., 6, 690-700. (Pubitemid 23290023)
    • (1993) Chemical Research in Toxicology , vol.6 , Issue.5 , pp. 690-700
    • Gannett, P.M.1    Sura, T.P.2
  • 35
    • 74049108184 scopus 로고    scopus 로고
    • Entrapment and structure of an extrahelical guanine attempting to enter the active site of a bacterial DNA glycosylase, MutM
    • Qi, Y., Spong, M.C., Nam, K., Karplus, M. and Verdine, G.L. (2010) Entrapment and structure of an extrahelical guanine attempting to enter the active site of a bacterial DNA glycosylase, MutM. J. Biol. Chem., 285, 1468-1478.
    • (2010) J. Biol. Chem. , vol.285 , pp. 1468-1478
    • Qi, Y.1    Spong, M.C.2    Nam, K.3    Karplus, M.4    Verdine, G.L.5
  • 37
    • 33645807371 scopus 로고    scopus 로고
    • A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA
    • Blainey, P.C., van Oijen, A.M., Banerjee, A., Verdine, G.L. and Xie, X.S. (2006) A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA. Proc. Natl Acad. Sci. USA, 103, 5752-5727.
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 5752-5727
    • Blainey, P.C.1    Van Oijen, A.M.2    Banerjee, A.3    Verdine, G.L.4    Xie, X.S.5
  • 38
    • 34848899274 scopus 로고    scopus 로고
    • Enzymatic capture of an extrahelical thymine in the search for uracil in DNA
    • DOI 10.1038/nature06131, PII NATURE06131
    • Parker, J.B., Bianchet, M.A., Krosky, D.J., Friedman, J.I., Amzel, L.M. and Stivers, J.T. (2007) Enzymatic capture of an extrahelical thymine in the search for uracil in DNA. Nature, 449, 433-437. (Pubitemid 47509542)
    • (2007) Nature , vol.449 , Issue.7161 , pp. 433-437
    • Parker, J.B.1    Bianchet, M.A.2    Krosky, D.J.3    Friedman, J.I.4    Amzel, L.M.5    Stivers, J.T.6
  • 39
    • 49449088997 scopus 로고    scopus 로고
    • Uracil DNA glycosylase uses DNA hopping and short-range sliding to trap extrahelical uracils
    • Porecha, R.H. and Stivers, J.T. (2008) Uracil DNA glycosylase uses DNA hopping and short-range sliding to trap extrahelical uracils. Proc. Natl Acad. Sci. USA, 105, 10791-10796.
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 10791-10796
    • Porecha, R.H.1    Stivers, J.T.2
  • 40
    • 67649832360 scopus 로고    scopus 로고
    • Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage
    • Friedman, J.I., Majumdar, A. and Stivers, J.T. (2009) Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage. Nucleic Acids Res., 37, 3493-3500.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 3493-3500
    • Friedman, J.I.1    Majumdar, A.2    Stivers, J.T.3
  • 41
    • 16544386633 scopus 로고    scopus 로고
    • Dynamic opening of DNA during the enzymatic search for a damaged base
    • Cao, C., Jiang, Y.L., Stivers, J.T. and Song, F. (2004) Dynamic opening of DNA during the enzymatic search for a damaged base. Nat. Struct. Mol. Biol., 11, 1230-1236.
    • (2004) Nat. Struct. Mol. Biol. , vol.11 , pp. 1230-1236
    • Cao, C.1    Jiang, Y.L.2    Stivers, J.T.3    Song, F.4
  • 42
    • 35548974318 scopus 로고    scopus 로고
    • A study of 7-deaza-2′-deoxyguanosine-2′-deoxycytidine base pairing in DNA
    • DOI 10.1093/nar/gkm670
    • Ganguly, M., Wang, F., Kaushik, M., Stone, M.P., Marky, L.A. and Gold, B. (2007) A study of 7-deaza-20-deoxyguanosine 20- deoxycytidine base pairing in DNA. Nucleic Acids Res., 35, 6181-6195. (Pubitemid 350018580)
    • (2007) Nucleic Acids Research , vol.35 , Issue.18 , pp. 6181-6195
    • Ganguly, M.1    Wang, F.2    Kaushik, M.3    Stone, M.P.4    Marky, L.A.5    Gold, B.6
  • 43
    • 46849112412 scopus 로고    scopus 로고
    • A bridging water anchors the tethered 5-(3-aminopropyl)-2′- deoxyuridine amine in the DNA major groove proximate to the N+2 CG base pair: Implications for formation of interstrand 5′-GNC-3′ cross-links by nitrogen mustards
    • DOI 10.1021/bi800375m
    • Wang, F., Li, F., Ganguly, M., Marky, L.A., Gold, B., Egli, M. and Stone, M.P. (2008) A bridging water anchors the tethered 5- (3-aminopropyl)-20- deoxyuridine amine in the DNA major groove proximate to the N+2 C.G base pair: implications for formation of interstrand 50-GNC-30 cross-links by nitrogen mustards. Biochemistry, 47, 7147-7157. (Pubitemid 351956363)
    • (2008) Biochemistry , vol.47 , Issue.27 , pp. 7147-7157
    • Wang, F.1    Li, F.2    Ganguly, M.3    Marky, L.A.4    Gold, B.5    Egli, M.6    Stone, M.P.7
  • 44
    • 0014725117 scopus 로고
    • Oligonucleotide interactions. 3. Circular dichroism studies of the conformation of deoxyoligonucleotides
    • Cantor, C.R., Warshow, M.M. and Shapiro, H. (1970) Oligonucleotide interactions. 3. Circular dichroism studies of the conformation of deoxyoligonucleotides. Biopolymers, 9, 1059-1077.
    • (1970) Biopolymers , vol.9 , pp. 1059-1077
    • Cantor, C.R.1    Warshow, M.M.2    Shapiro, H.3
  • 45
    • 0020579962 scopus 로고
    • Salt-dependent conformational transitions in the self-complementary deoxydodecanucleotide d(CGCAATTCGCG): Evidence for hairpin formation
    • Marky, L.A., Blumenfeld, K.S., Kozlowski, S. and Breslauer, K.J. (1983) Salt-dependent conformational transitions in the self-complementary deoxydodecanucleotide d(CGCGAATTC GCG): evidence for hairpin formation. Biopolymers, 22, 1247-1257. (Pubitemid 13061907)
    • (1983) Biopolymers , vol.22 , Issue.4 , pp. 1247-1257
    • Marky, L.A.1    Blumenfeld, K.S.2    Kozlowski, S.3    Breslauer, K.J.4
  • 46
    • 0023406843 scopus 로고
    • Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves
    • Marky, L.A. and Breslauer, K.J. (1987) Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves. Biopolymers, 26, 1601-1620.
    • (1987) Biopolymers , vol.26 , pp. 1601-1620
    • Marky, L.A.1    Breslauer, K.J.2
  • 47
    • 33846622891 scopus 로고    scopus 로고
    • 4
    • DOI 10.1016/j.bpc.2006.05.031, PII S030146220600192X
    • Kaushik, M., Suehl, N. and Marky, L.A. (2007) Calorimetric unfolding of the bimolecular and i-motif complexes of the human telomere complementary strand, d(C3TA2)4. Biophys Chem., 126, 154-164. (Pubitemid 46186641)
    • (2007) Biophysical Chemistry , vol.126 , Issue.1-3 , pp. 154-164
    • Kaushik, M.1    Suehl, N.2    Marky, L.A.3
  • 49
    • 77449125296 scopus 로고    scopus 로고
    • Monitoring the temperature unfolding of G-quadruplexes by UV and circular dichroism spectroscopies and calorimetry techniques
    • Olsen, C.M. and Marky, L.A. (2010) Monitoring the temperature unfolding of G-quadruplexes by UV and circular dichroism spectroscopies and calorimetry techniques. Methods Mol. Biol., 608, 147-158.
    • (2010) Methods Mol. Biol. , vol.608 , pp. 147-158
    • Olsen, C.M.1    Marky, L.A.2
  • 50
    • 62149097929 scopus 로고    scopus 로고
    • Helix-coil transition of DNA monitored by pressure perturbation calorimetry
    • Rayan, G., Tsamaloukas, A.D., Macgregor, R.B. Jr and Heerklotz, H. (2009) Helix-coil transition of DNA monitored by pressure perturbation calorimetry. J. Phys. Chem. B, 113, 1738-1742.
    • (2009) J. Phys. Chem. B , vol.113 , pp. 1738-1742
    • Rayan, G.1    Tsamaloukas, A.D.2    Macgregor Jr., R.B.3    Heerklotz, H.4
  • 51
    • 59949096896 scopus 로고    scopus 로고
    • DNA hydration studied by pressure perturbation scanning microcalorimetry
    • Dragan, A.I., Russell, D.J. and Privalov, P.L. (2009) DNA hydration studied by pressure perturbation scanning microcalorimetry. Biopolymers, 91, 95-101.
    • (2009) Biopolymers , vol.91 , pp. 95-101
    • Dragan, A.I.1    Russell, D.J.2    Privalov, P.L.3
  • 52
    • 61749086986 scopus 로고    scopus 로고
    • Energetic and hydration contributions of the removal of methyl groups from thymine to form uracil in G-quadruplexes
    • Olsen, C.M. and Marky, L.A. (2009) Energetic and hydration contributions of the removal of methyl groups from thymine to form uracil in G-quadruplexes. J. Phys. Chem. B, 113, 9-11.
    • (2009) J. Phys. Chem. B , vol.113 , pp. 9-11
    • Olsen, C.M.1    Marky, L.A.2
  • 53
    • 0002497304 scopus 로고
    • The partial molal volumes of electrolytes in aqueous solution in structure and transport processes in water and aqueous solutions
    • Home, R.A. (ed.), Wiley, New York
    • Millero, F.J. (1972) The partial molal volumes of electrolytes in aqueous solution in structure and transport processes in water and aqueous solutions. In Home, R.A. (ed.), Water and Aqueous Solutions. Wiley, New York, pp. 519-595.
    • (1972) Water and Aqueous Solutions , pp. 519-595
    • Millero, F.J.1
  • 54
    • 33748996512 scopus 로고    scopus 로고
    • Compressibility measurements using an oscillation-type density meter
    • DOI 10.1088/0957-0233/17/10/010, PII S0957023306217314, 010
    • Fehlauer, H. and Wolf, H. (2006) Compressibility measurements using an oscillation-type density meter. Meas. Sci. Technol., 17, 2593-2596. (Pubitemid 44444694)
    • (2006) Measurement Science and Technology , vol.17 , Issue.10 , pp. 2593-2596
    • Fehlauer, H.1    Wolf, H.2
  • 55
    • 0001547890 scopus 로고    scopus 로고
    • Gradient-selected NOESY-A fourfold reduction of the measurement time for the noesy experiment
    • Wagner, R. and Berger, S. (1996) Gradient-selected NOESY - A fourfold reduction of the measurement time form the NOESY experiment. J. Magn. Reson. A, 123, 119-121. (Pubitemid 126752001)
    • (1996) Journal of Magnetic Resonance - Series A , vol.123 , Issue.1 , pp. 119-121
    • Wagner, R.1    Berger, S.2
  • 56
    • 0343359244 scopus 로고
    • Investigation of exchange processes by two-dimensional NMR spectroscopy
    • Jeener, J., Meier, B.H., Bachmann, P. and Ernst, R.R. (1979) Investigation of exchange processes by two-dimensional NMR spectroscopy. J. Chem. Phys., 71, 4546-4553.
    • (1979) J. Chem. Phys. , vol.71 , pp. 4546-4553
    • Jeener, J.1    Meier, B.H.2    Bachmann, P.3    Ernst, R.R.4
  • 57
    • 0026951903 scopus 로고
    • Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions
    • Piotto, M., Saudek, V. and Sklenar, V. (1992) Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions. J. Biomol. NMR, 2, 661-665.
    • (1992) J. Biomol. NMR , vol.2 , pp. 661-665
    • Piotto, M.1    Saudek, V.2    Sklenar, V.3
  • 58
    • 0033524401 scopus 로고    scopus 로고
    • Effects of hydration, ion release, and excluded volume on the melting of triplex and duplex DNA
    • DOI 10.1021/bi9820154
    • Spink, C.H. and Chaires, J.B. (1999) Effects of hydration, ion release, and excluded volume on the melting of triplex and duplex DNA. Biochemistry, 38, 496-508. (Pubitemid 29035721)
    • (1999) Biochemistry , vol.38 , Issue.1 , pp. 496-508
    • Spink, C.H.1    Chaires, J.B.2
  • 59
    • 0027997526 scopus 로고
    • DNA lesions. A thermodynamic perspective
    • Plum, G.E. and Breslauer, K.J. (1994) DNA lesions. A thermodynamic perspective. Ann. NY Acad. Sci., 726, 45-55.
    • (1994) Ann. NY Acad. Sci. , vol.726 , pp. 45-55
    • Plum, G.E.1    Breslauer, K.J.2
  • 60
    • 0031755274 scopus 로고    scopus 로고
    • Hydration of the phosphate group in double-helical DNA
    • Schneider, B., Patel, K. and Berman, H.M. (1998) Hydration of the phosphate group in double-helical DNA. Biophys. J., 75, 2422-2434. (Pubitemid 28492125)
    • (1998) Biophysical Journal , vol.75 , Issue.5 , pp. 2422-2434
    • Schneider, B.1    Patel, K.2    Berman, H.M.3
  • 61
    • 0034725528 scopus 로고    scopus 로고
    • Water and ion binding around RNA and DNA (C, G) oligomers
    • Auffinger, P. and Westhof, E. (2000) Water and ion binding around RNA and DNA (C, G) oligomers. J. Mol. Biol., 300, 1113-1131.
    • (2000) J. Mol. Biol. , vol.300 , pp. 1113-1131
    • Auffinger, P.1    Westhof, E.2
  • 62
    • 0020692923 scopus 로고
    • Ordered water structure around a B-DNA dodecamer. A quantitative study
    • Kopka, M.L., Fratini, A.V., Drew, H.R. and Dickerson, R.E. (1983) Ordered water structure around a B-DNA dodecamer. A quantitative study. J. Mol. Biol., 163, 129-146. (Pubitemid 13142801)
    • (1983) Journal of Molecular Biology , vol.163 , Issue.1 , pp. 129-146
    • Kopka, M.L.1    Fratini, A.V.2    Drew, H.R.3    Dickerson, R.E.4
  • 63
    • 0032499635 scopus 로고    scopus 로고
    • The B-DNA dodecamer at high resolution reveals a spine of water on sodium
    • DOI 10.1021/bi973073c
    • Shui, X., McFail-Isom, L., Hu, G.G. and Williams, L.D. (1998) The B-DNA dodecamer at high resolution reveals a spine of water on sodium. Biochemistry, 37, 8341-8355. (Pubitemid 28275453)
    • (1998) Biochemistry , vol.37 , Issue.23 , pp. 8341-8355
    • Shui, X.1    McFail-Isom, L.2    Hu, G.G.3    Williams, L.D.4
  • 65
    • 0030027496 scopus 로고
    • Clathrate hydrates are poor models of biomolecule hydration
    • Lipscomb, L.A., Zhou, F.X. and Williams, L.D. (1995) Clathrate hydrates are poor models of biomolecule hydration. Biopolymers, 38, 177-181.
    • (1995) Biopolymers , vol.38 , pp. 177-181
    • Lipscomb, L.A.1    Zhou, F.X.2    Williams, L.D.3
  • 68
    • 0024805429 scopus 로고
    • Probing the hydration of the minor groove of A-T synthetic DNA polymers by volume and heat changes
    • Marky, L.A. and Kupke, D.W. (1989) Probing the hydration of the minor groove of A-T synthetic DNA polymers by volume and heat changes. Biochemistry, 28, 9982.
    • (1989) Biochemistry , vol.28 , pp. 9982
    • Marky, L.A.1    Kupke, D.W.2
  • 69
    • 0025896047 scopus 로고
    • Differential hydration of dA•dT base pairing and dA, dT bulges in deoxyoligonucleotides
    • Zieba, K., Shu, T.M., Kupke, D.W. and Marky, L.A. (1991) Differential hydration of dA•dT base pairing and dA, dT bulges in deoxyoligonucleotides. Biochemistry, 30, 8018-8026.
    • (1991) Biochemistry , vol.30 , pp. 8018-8026
    • Zieba, K.1    Shu, T.M.2    Kupke, D.W.3    Marky, L.A.4
  • 70
    • 0030009945 scopus 로고    scopus 로고
    • Differential hydration thermodynamics of stereoisomeric DNA-benzo[a]pyrene adducts derived from diol epoxide enantiomers with different tumorigenic potentials
    • DOI 10.1021/ja9538703
    • Marky, L.A., Rentzeperis, D., Luneva, N.P., Cosman, M., Geacintov, N.E. and Kupke, D.W. (1996) Differential hydration thermodynamics of stereoisomeric DNA-benzo[a]pyrene adducts derived from diol epoxide enantiomers with different tumorigenic potentials. J. Am. Chem. Soc., 118, 3804-3810. (Pubitemid 26164875)
    • (1996) Journal of the American Chemical Society , vol.118 , Issue.16 , pp. 3804-3810
    • Marky, L.A.1    Rentzeperis, D.2    Luneva, N.P.3    Cosman, M.4    Geacintov, N.E.5    Kupke, D.W.6
  • 71
    • 0034581545 scopus 로고    scopus 로고
    • Enthalpy-entropy compensations in nucleic acids: Contribution of electrostriction and structural hydration
    • DOI 10.1016/S0076-6879(00)23376-4
    • Marky, L.A. and Kupke, D.W. (2000) Enthalpy-entropy compensation in nucleic acids: contribution of electrostriction and structural hydration. Methods Enzymol., 323, 419-441. (Pubitemid 34193288)
    • (2000) Methods in Enzymology , vol.323 , pp. 419-441
    • Marky, L.A.1    Kupke, D.W.2
  • 72
    • 61749086986 scopus 로고    scopus 로고
    • Energetic and hydration contributions of the removal of methyl groups from thymine to form uracil in G-quadruplexes
    • Olsen, C.M. and Marky, L.A. (2009) Energetic and hydration contributions of the removal of methyl groups from thymine to form uracil in G-quadruplexes. J. Phys. Chem. B, 113, 9-11.
    • (2009) J. Phys. Chem. B , vol.113 , pp. 9-11
    • Olsen, C.M.1    Marky, L.A.2
  • 73
    • 0038036707 scopus 로고    scopus 로고
    • Surprising roles of electrostatic interactions in DNA-ligand complexes
    • DOI 10.1002/bip.10319
    • Howerton, S.B., Nagpal, A. and Williams, L.D. (2003) Surprising roles of electrostatic interactions in DNA-ligand complexes. Biopolymers, 69, 87-99. (Pubitemid 36547058)
    • (2003) Biopolymers , vol.69 , Issue.1 , pp. 87-99
    • Howerton, S.B.1    Nagpal, A.2    Williams, L.D.3
  • 74
    • 0035964383 scopus 로고    scopus 로고
    • Locating monovalent cations in the grooves of B-DNA
    • DOI 10.1021/bi010391+
    • Howerton, S.B., Sines, C.C., VanDerveer, D. and Williams, L.D. (2001) Locating monovalent cations in the grooves of B-DNA. Biochemistry, 40, 10023-10031. (Pubitemid 32800109)
    • (2001) Biochemistry , vol.40 , Issue.34 , pp. 10023-10031
    • Howerton, S.B.1    Sines, C.C.2    VanDerveer, D.3    Williams, L.D.4
  • 75
    • 69349089539 scopus 로고    scopus 로고
    • Introduction of cationic charge into DNA near the major groove edge of a guanine-cytosine base pair: Characterization of oligodeoxynucleotides substituted with 7-aminomethyl-7-deaza-20- deoxyguanosine
    • Ganguly, M., Wang, R.W., Marky, L.A. and Gold, B. (2009) Introduction of cationic charge into DNA near the major groove edge of a guanine-cytosine base pair: characterization of oligodeoxynucleotides substituted with 7-aminomethyl-7-deaza-20- deoxyguanosine. J. Am. Chem. Soc., 131, 12068-12069.
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 12068-12069
    • Ganguly, M.1    Wang, R.W.2    Marky, L.A.3    Gold, B.4


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