-
1
-
-
0011390532
-
Monte Carlo simulations of the solvation of the dimethyl phosphate anion
-
Alagona, G., C. Ghio, and P. A. Kollman. 1985. Monte Carlo simulations of the solvation of the dimethyl phosphate anion. J. Am. Chem. Soc. 107:2229-2239.
-
(1985)
J. Am. Chem. Soc.
, vol.107
, pp. 2229-2239
-
-
Alagona, G.1
Ghio, C.2
Kollman, P.A.3
-
3
-
-
0029758960
-
Crystal structure of the self-complementary 5′-purine start decamer d(GCACGCGTGC) in the A-DNA conformation. Part II
-
Ban, C., and M. Sundaralingam. 1996. Crystal structure of the self-complementary 5′-purine start decamer d(GCACGCGTGC) in the A-DNA conformation. Part II. Biophys. J. 71:1222-1227.
-
(1996)
Biophys. J.
, vol.71
, pp. 1222-1227
-
-
Ban, C.1
Sundaralingam, M.2
-
4
-
-
0028265282
-
The low temperature crystal structure of the pure-spermine form of Z-DNA reveals binding of a spermine molecule in the minor groove
-
Bancroft, D., L. D. Williams, A. Rich, and M. Egli. 1994. The low temperature crystal structure of the pure-spermine form of Z-DNA reveals binding of a spermine molecule in the minor groove. Biochemistry. 33:1073-1086.
-
(1994)
Biochemistry
, vol.33
, pp. 1073-1086
-
-
Bancroft, D.1
Williams, L.D.2
Rich, A.3
Egli, M.4
-
5
-
-
0026742978
-
The nucleic acid database - A comprehensive relational database of three-dimensional structures of nucleic acids
-
Berman, H. M., W. K. Olson, D. L. Beveridge, J. Westbrook, A. Gelbin, T. Demeny, S.-H. Hsieh, A. R. Srinivasan, and B. Schneider. 1992. The nucleic acid database - a comprehensive relational database of three-dimensional structures of nucleic acids. Biophys. J. 63:751-759.
-
(1992)
Biophys. J.
, vol.63
, pp. 751-759
-
-
Berman, H.M.1
Olson, W.K.2
Beveridge, D.L.3
Westbrook, J.4
Gelbin, A.5
Demeny, T.6
Hsieh, S.-H.7
Srinivasan, A.R.8
Schneider, B.9
-
6
-
-
0002680006
-
Nucleic acid hydration
-
S. Neidle, editor. Oxford, Oxford University Press. (in press)
-
Berman, H. M., and B. Schneider. 1998. Nucleic acid hydration. In Handbook of Nucleic Acid Structure. S. Neidle, editor. Oxford, Oxford University Press. (in press).
-
(1998)
Handbook of Nucleic Acid Structure
-
-
Berman, H.M.1
Schneider, B.2
-
8
-
-
0027048948
-
Crystal and molecular structure of d(GTGCGCAC) - Investigation of the effects of base sequence on the conformation of octamer duplexes
-
Bingman, C., X. Li, G. Zon, and M. Sundaralingam. 1992. Crystal and molecular structure of d(GTGCGCAC) - investigation of the effects of base sequence on the conformation of octamer duplexes. Biochemistry. 31:12803-12812.
-
(1992)
Biochemistry
, vol.31
, pp. 12803-12812
-
-
Bingman, C.1
Li, X.2
Zon, G.3
Sundaralingam, M.4
-
11
-
-
0029763453
-
Hydration effects accompanying the substitution of counterions in the ionic atmosphere of poly(rA)·poly(rU) and poly(rA)·2poly(rU) helices
-
Buckin, V., H. Tran, V. Morozov, and L. A. Marky. 1996. Hydration effects accompanying the substitution of counterions in the ionic atmosphere of poly(rA)·poly(rU) and poly(rA)·2poly(rU) helices. J. Am. Chem. Soc. 118:7033-7039.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 7033-7039
-
-
Buckin, V.1
Tran, H.2
Morozov, V.3
Marky, L.A.4
-
12
-
-
0027787459
-
The crystal structure of N4-methylcytosine·guanosine base-pairs in the synthetic hexanucleotide D(CGCGm4CG)
-
Cervi, A. R., A. Guy, G. A. Leonard, R. Teoule, and W. N. Hunter. 1993. The crystal structure of N4-methylcytosine·guanosine base-pairs in the synthetic hexanucleotide D(CGCGm4CG). Nucleic Acids Res. 21: 5623-5629.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 5623-5629
-
-
Cervi, A.R.1
Guy, A.2
Leonard, G.A.3
Teoule, R.4
Hunter, W.N.5
-
13
-
-
0027993455
-
Hydration and partial compressibility of biological compounds
-
Chalikian, T. V., A. P. Sarvazyan, and K. J. Breslauer. 1994a. Hydration and partial compressibility of biological compounds. Biophys. Chem. 51:89-109.
-
(1994)
Biophys. Chem.
, vol.51
, pp. 89-109
-
-
Chalikian, T.V.1
Sarvazyan, A.P.2
Breslauer, K.J.3
-
14
-
-
0028222102
-
Influence of base composition, base sequence, and duplex structure on DNA hydration: Apparent molar volumes and apparent molar adiabatic compressibilities of synthetic and natural DNA duplexes at 25°C
-
Chalikian, T. V., A. P. Sarvazyan, G. E. Plum, and K. J. Breslauer. 1994b. Influence of base composition, base sequence, and duplex structure on DNA hydration: apparent molar volumes and apparent molar adiabatic compressibilities of synthetic and natural DNA duplexes at 25°C. Biochemistry. 33:2394-2401.
-
(1994)
Biochemistry
, vol.33
, pp. 2394-2401
-
-
Chalikian, T.V.1
Sarvazyan, A.P.2
Plum, G.E.3
Breslauer, K.J.4
-
15
-
-
0023053306
-
Solvation of the left-handed hexamer d(5BrC-G-5BrC-G-5BrC-G) in crystals grown at two temperatures
-
Chevrier, B., A. C. Dock, B. Hartmann, M. Leng, D. Moras, M. T. Thuong, and E. J. Westhof. 1986. Solvation of the left-handed hexamer d(5BrC-G-5BrC-G-5BrC-G) in crystals grown at two temperatures. J. Mol. Biol. 188:707-719.
-
(1986)
J. Mol. Biol.
, vol.188
, pp. 707-719
-
-
Chevrier, B.1
Dock, A.C.2
Hartmann, B.3
Leng, M.4
Moras, D.5
Thuong, M.T.6
Westhof, E.J.7
-
16
-
-
0025048750
-
2: A combined x-ray and NMR study
-
2: a combined x-ray and NMR study. Nucleic Acids Res. 18:5521-5528.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 5521-5528
-
-
Clark, G.R.1
Brown, D.G.2
Sanderson, M.R.3
Chwalinski, T.4
Neidle, S.5
Veal, J.M.6
Jones, R.L.7
Wilson, W.D.8
Zon, G.9
Garman, E.10
Stuart, D.I.11
-
17
-
-
0001938421
-
Structure of water and counterions for nucleic acids in solution
-
E. Clementi and R. H. Sarma, editors. Adenine Press, New York
-
Clementi, E. 1983. Structure of water and counterions for nucleic acids in solution. In Structure and Dynamics: Nucleic Acids and Proteins. E. Clementi and R. H. Sarma, editors. Adenine Press, New York. 321-364.
-
(1983)
Structure and Dynamics: Nucleic Acids and Proteins
, pp. 321-364
-
-
Clementi, E.1
-
18
-
-
0005927593
-
Efficient algorithms for distance queries in macromolecular structure databases
-
University of Pittsburgh, Pittsburgh, PA
-
Cohen, D., K. Vadaparty, and B. Dickinson. 1995. Efficient algorithms for distance queries in macromolecular structure databases. Technical Report. University of Pittsburgh, Pittsburgh, PA.
-
(1995)
Technical Report
-
-
Cohen, D.1
Vadaparty, K.2
Dickinson, B.3
-
19
-
-
0024966970
-
Effects of 5-fluorouracil/guanine wobble base pairs in Z-DNA: Molecular and crystal structure of d(CGCGFG)
-
Coll, M., D. Saal, C. A. Frederick, J. Aymami, A. Rich, and A. H.-J. Wang. 1989. Effects of 5-fluorouracil/guanine wobble base pairs in Z-DNA: molecular and crystal structure of d(CGCGFG). Nucleic Acids Res. 17:911-923.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 911-923
-
-
Coll, M.1
Saal, D.2
Frederick, C.A.3
Aymami, J.4
Rich, A.5
Wang, A.H.-J.6
-
20
-
-
0022974081
-
Crystal structure of a Z-DNA fragment containing thymine/ 2-aminoadenine base pairs
-
Coll, M., A. H.-J. Wang, G. A. van der Marel, J. H. van Boom, and A. Rich. 1986. Crystal structure of a Z-DNA fragment containing thymine/ 2-aminoadenine base pairs. J. Biomol. Struct. Dyn. 4:157-172.
-
(1986)
J. Biomol. Struct. Dyn.
, vol.4
, pp. 157-172
-
-
Coll, M.1
Wang, A.H.-J.2
Van Der Marel, G.A.3
Van Boom, J.H.4
Rich, A.5
-
21
-
-
0023054147
-
Chiral phosphorothioate analogues of B-DNA. the crystal structure of Rp-d|Gp(S)CpGp(S)CpGp(S)C|
-
Cruse, W. B. T., S. A. Salisbury, T. Brown, R. Cosstick, F. Eckstein, and O. Kennard. 1986. Chiral phosphorothioate analogues of B-DNA. The crystal structure of Rp-d|Gp(S)CpGp(S)CpGp(S)C|. J. Mol. Biol. 192: 891-905.
-
(1986)
J. Mol. Biol.
, vol.192
, pp. 891-905
-
-
Cruse, W.B.T.1
Salisbury, S.A.2
Brown, T.3
Cosstick, R.4
Eckstein, F.5
Kennard, O.6
-
22
-
-
0031585991
-
Kinetics of DNA Hydration
-
Denisov, V. P., G. Carlström, K. Venu, and B. Halle. 1997. Kinetics of DNA Hydration. J. Mol. Biol. 268:118-136.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 118-136
-
-
Denisov, V.P.1
Carlström, G.2
Venu, K.3
Halle, B.4
-
23
-
-
0019843568
-
Structure of a B-DNA dodecamer. III. Geometry of hydration
-
Drew, H. R., and R. E. Dickerson. 1981. Structure of a B-DNA dodecamer. III. Geometry of hydration. J. Mol. Biol. 151:535-556.
-
(1981)
J. Mol. Biol.
, vol.151
, pp. 535-556
-
-
Drew, H.R.1
Dickerson, R.E.2
-
24
-
-
0019558179
-
Structure of a B-DNA dodecamer: Conformation and dynamics
-
Drew, H. R., R. M. Wing, T. Takano, C. Broka, S. Tanaka, K. Itakura, and R. E. Dickerson. 1981. Structure of a B-DNA dodecamer: conformation and dynamics. Proc. Natl. Acad. Sci. USA. 78:2179-2183.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 2179-2183
-
-
Drew, H.R.1
Wing, R.M.2
Takano, T.3
Broka, C.4
Tanaka, S.5
Itakura, K.6
Dickerson, R.E.7
-
25
-
-
0031551574
-
Molecular dynamics simulation study of DNA dedoecamer d(CGCGAATTCGCG) in solution: Conformation and hydration
-
Duan, Y., P. Wilkosz, M. Crowley, and J. M. Rosenberg. 1997. Molecular dynamics simulation study of DNA dedoecamer d(CGCGAATTCGCG) in solution: conformation and hydration. J. Mol. Biol. 272:553-572.
-
(1997)
J. Mol. Biol.
, vol.272
, pp. 553-572
-
-
Duan, Y.1
Wilkosz, P.2
Crowley, M.3
Rosenberg, J.M.4
-
26
-
-
35949020265
-
Resonant microwave absorption of selected DNA molecules
-
Edwards, G. S., C. C. Davis, J. D. Saffer, and M. L. Swicord. 1984. Resonant microwave absorption of selected DNA molecules. Phys. Rev. Lett. 53:1284-1287.
-
(1984)
Phys. Rev. Lett.
, vol.53
, pp. 1284-1287
-
-
Edwards, G.S.1
Davis, C.C.2
Saffer, J.D.3
Swicord, M.L.4
-
27
-
-
0029956116
-
RNA hydration: A detailed look
-
Egli, M., S. Portmann, and N. Usman. 1996. RNA hydration: a detailed look. Biochemistry. 35:8489-8494.
-
(1996)
Biochemistry
, vol.35
, pp. 8489-8494
-
-
Egli, M.1
Portmann, S.2
Usman, N.3
-
28
-
-
0026316202
-
Structure of the pure-spermine form of Z-DNA (magnesium free) at 1 Ångstrom resolution
-
Egli, M., L. D. Williams, Q. Gao, and A. Rich. 1991. Structure of the pure-spermine form of Z-DNA (magnesium free) at 1 Ångstrom resolution. Biochemistry. 30:11388-11402.
-
(1991)
Biochemistry
, vol.30
, pp. 11388-11402
-
-
Egli, M.1
Williams, L.D.2
Gao, Q.3
Rich, A.4
-
29
-
-
0029024850
-
Hydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition
-
Eisenstein, M., and Z. Shakked. 1995. Hydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition. J. Mol. Biol. 248:662-678.
-
(1995)
J. Mol. Biol.
, vol.248
, pp. 662-678
-
-
Eisenstein, M.1
Shakked, Z.2
-
30
-
-
33947477427
-
Hydration of deoxyribonucleic acid. I. A gravimetric study
-
Falk, M., K. A. Hartman, and R. C. Lord. 1962. Hydration of deoxyribonucleic acid. I. A gravimetric study. J. Am. Chem. Soc. 84:3843-3846.
-
(1962)
J. Am. Chem. Soc.
, vol.84
, pp. 3843-3846
-
-
Falk, M.1
Hartman, K.A.2
Lord, R.C.3
-
31
-
-
0001235534
-
Infrared study of the state of water in the hydration shell of DNA
-
Falk, M., A. G. Poole, and C. G. Goymour. 1970. Infrared study of the state of water in the hydration shell of DNA. Can. J. Chem. 48:1536-1542.
-
(1970)
Can. J. Chem.
, vol.48
, pp. 1536-1542
-
-
Falk, M.1
Poole, A.G.2
Goymour, C.G.3
-
34
-
-
0024363293
-
The molecular structure of the left-handed Z-DNA double helix at 1.0-Å atomic resolution
-
Gessner, R. V., C. A. Frederick, G. J. Quigley, A. Rich, and A. H.-J. Wang. 1989. The molecular structure of the left-handed Z-DNA double helix at 1.0-Å atomic resolution. J. Biol. Chem. 264:7921-7935.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 7921-7935
-
-
Gessner, R.V.1
Frederick, C.A.2
Quigley, G.J.3
Rich, A.4
Wang, A.H.-J.5
-
35
-
-
0028221644
-
Comparative studies of high resolution Z-DNA crystal structures. 1. Common hydration patterns of alternating Dc-DG
-
Gessner, R. V., G. J. Quigley, and M. Egli. 1994. Comparative studies of high resolution Z-DNA crystal structures. 1. Common hydration patterns of alternating Dc-DG. J. Mol. Biol. 236:1154-1168.
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 1154-1168
-
-
Gessner, R.V.1
Quigley, G.J.2
Egli, M.3
-
37
-
-
0028931291
-
Crystal structure of C-T-C-T-C-G-A-G-A-G. Implications for the structure of the Holliday junction
-
Goodsell, D. S., K. Grzeskowiak, and R. E. Dickerson. 1995. Crystal structure of C-T-C-T-C-G-A-G-A-G. Implications for the structure of the Holliday junction. Biochemistry. 34:1022-1029.
-
(1995)
Biochemistry
, vol.34
, pp. 1022-1029
-
-
Goodsell, D.S.1
Grzeskowiak, K.2
Dickerson, R.E.3
-
38
-
-
0027536101
-
Crystal structure of CATGGCCATG and its implications for A-tract bending models
-
Goodsell, D. S., M. L. Kopka, D. Cascio, and R. E. Dickerson. 1993. Crystal structure of CATGGCCATG and its implications for A-tract bending models. Proc. Natl Acad. Sci. USA. 90:2930-2934.
-
(1993)
Proc. Natl Acad. Sci. USA
, vol.90
, pp. 2930-2934
-
-
Goodsell, D.S.1
Kopka, M.L.2
Cascio, D.3
Dickerson, R.E.4
-
40
-
-
0027171928
-
Crystallographic analysis of C-C-A-A-G-C-T-T-G-G and its implications for bending in B-DNA
-
Grzeskowiak, K., D. S. Goodsell, M. Kaczor-Grzeskowiak, D. Cascio, and R. E. Dickerson. 1993. Crystallographic analysis of C-C-A-A-G-C-T-T-G-G and its implications for bending in B-DNA. Biochemistry. 32: 8923-8931.
-
(1993)
Biochemistry
, vol.32
, pp. 8923-8931
-
-
Grzeskowiak, K.1
Goodsell, D.S.2
Kaczor-Grzeskowiak, M.3
Cascio, D.4
Dickerson, R.E.5
-
41
-
-
0025816853
-
The structure of B-helical C-G-A-T-C-G-A-T-C-G and comparison with C-C-A-A-C-G-T-T-G-G: The effect of base pair reversal
-
Grzeskowiak, K., K. Yanagi, G. G. Privé, and R. E. Dickerson. 1991. The structure of B-helical C-G-A-T-C-G-A-T-C-G and comparison with C-C-A-A-C-G-T-T-G-G: the effect of base pair reversal. J. Biol. Chem. 266:8861-8883.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 8861-8883
-
-
Grzeskowiak, K.1
Yanagi, K.2
Privé, G.G.3
Dickerson, R.E.4
-
43
-
-
0032213898
-
The structure of d(TGCGCA)2 and a comparison to other DNA hexamers
-
in press
-
Harper, A., J. A. Brannigan, M. Buck, L. Hewitt, R. J. Lewis, M. H. Moore, and B. Schneider. 1998. The structure of d(TGCGCA)2 and a comparison to other DNA hexamers. Acta Crystallogr. D. (in press).
-
(1998)
Acta Crystallogr. D
-
-
Harper, A.1
Brannigan, J.A.2
Buck, M.3
Hewitt, L.4
Lewis, R.J.5
Moore, M.H.6
Schneider, B.7
-
44
-
-
0024846232
-
Crystallographic study of one turn of G/C rich B-DNA
-
Heinemann, U., and C. Alings. 1989. Crystallographic study of one turn of G/C rich B-DNA. J. Mol. Biol. 210:369-381.
-
(1989)
J. Mol. Biol.
, vol.210
, pp. 369-381
-
-
Heinemann, U.1
Alings, C.2
-
45
-
-
0026738923
-
5C-T-G-G - Helical fine structure, hydration, and comparison with C-C-A-G-G-C-C-T-G-G
-
5C-T-G-G - helical fine structure, hydration, and comparison with C-C-A-G-G-C-C-T-G-G. J. Biol. Chem. 267:7332-7341.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 7332-7341
-
-
Heinemann, U.1
Hahn, M.2
-
46
-
-
0023665237
-
Crystal structure analysis of an A-DNA fragment at 1.8 Å resolution: d(GC-CCGGGC)
-
Heinemann, U., H. Lauble, R. Frank, and H. Bloecker. 1987. Crystal structure analysis of an A-DNA fragment at 1.8 Å resolution: d(GC-CCGGGC). Nucleic Acids Res. 15:9531-9550.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 9531-9550
-
-
Heinemann, U.1
Lauble, H.2
Frank, R.3
Bloecker, H.4
-
47
-
-
0028955215
-
Hydration of nucleic acid fragments: Comparison of theory and experiment for high resolution crystal structures of RNA, DNA, and DNA-drug complexes
-
Hummer, G., A. E. Garcia, and D. M. Soumpasis. 1995. Hydration of nucleic acid fragments: comparison of theory and experiment for high resolution crystal structures of RNA, DNA, and DNA-drug complexes. Biophys. J. 68:1639-1652.
-
(1995)
Biophys. J.
, vol.68
, pp. 1639-1652
-
-
Hummer, G.1
Garcia, A.E.2
Soumpasis, D.M.3
-
48
-
-
0001030311
-
Computation of the water density distribution at the ice-water interface using the potentials-of-mean-force expansion
-
Hummer, G., and D. M. Soumpasis. 1994. Computation of the water density distribution at the ice-water interface using the potentials-of-mean-force expansion. Phys. Rev. E49:591-596.
-
(1994)
Phys. Rev.
, vol.E49
, pp. 591-596
-
-
Hummer, G.1
Soumpasis, D.M.2
-
49
-
-
0030007604
-
Modeling DNA in aqueous solutions: Theoretical and computer simulation studies on the ion atmosphere of DNA
-
Jayaram, B., and D. L. Beveridge. 1996. Modeling DNA in aqueous solutions: theoretical and computer simulation studies on the ion atmosphere of DNA. Annu. Rev. Biophys. Biomol. Struct. 25:367-394.
-
(1996)
Annu. Rev. Biophys. Biomol. Struct.
, vol.25
, pp. 367-394
-
-
Jayaram, B.1
Beveridge, D.L.2
-
50
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones, T. A., J.-Y. Zou, S. W. Cowan, and M. Kjeldgaard. 1991. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A. 47:110-119.
-
(1991)
Acta Crystallogr. A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.-Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
52
-
-
0022658606
-
Ordered water structure in an A-DNA octamer at 1.7 Å resolution
-
Kennard, O., W. B. T. Cruse, J. Nachman, T. Prange, Z. Shakked, and D. Rabinovich. 1986. Ordered water structure in an A-DNA octamer at 1.7 Å resolution. J. Biomol. Struct. Dyn. 3:623-647.
-
(1986)
J. Biomol. Struct. Dyn.
, vol.3
, pp. 623-647
-
-
Kennard, O.1
Cruse, W.B.T.2
Nachman, J.3
Prange, T.4
Shakked, Z.5
Rabinovich, D.6
-
53
-
-
0000235752
-
NMR evidence for DNA bound water in solution
-
Kubinec, M. G., and D. E. Wemmer. 1992. NMR evidence for DNA bound water in solution. J. Am. Chem. Soc. 114:8739-8740.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 8739-8740
-
-
Kubinec, M.G.1
Wemmer, D.E.2
-
54
-
-
0027055689
-
A high angle neutron fibre diffraction study of the hydration of the A conformation of the DNA double helix
-
Langan, P., V. T. Forsyth, A. Mahendrasingam, W. J. Pigram, S. A. Mason, and W. Fuller. 1992. A high angle neutron fibre diffraction study of the hydration of the A conformation of the DNA double helix. J. Biomol. Struct. Dyn. 10:489-503.
-
(1992)
J. Biomol. Struct. Dyn.
, vol.10
, pp. 489-503
-
-
Langan, P.1
Forsyth, V.T.2
Mahendrasingam, A.3
Pigram, W.J.4
Mason, S.A.5
Fuller, W.6
-
56
-
-
0025695837
-
Counterion effects on the physical properties and the A to B transition of calf thymus DNA films
-
Lavalle, N., S. A. Lee, and A. Rupprecht. 1990. Counterion effects on the physical properties and the A to B transition of calf thymus DNA films. Biopolymers. 30:877-887.
-
(1990)
Biopolymers
, vol.30
, pp. 877-887
-
-
Lavalle, N.1
Lee, S.A.2
Rupprecht, A.3
-
58
-
-
0027058824
-
NMR observation of individual molecules of hydration water bound to DNA duplexes: Direct evidence for a spine of hydration water present in aqueous solution
-
Liepinsh, E., G. Otting, and Wüthrich. 1992. NMR observation of individual molecules of hydration water bound to DNA duplexes: direct evidence for a spine of hydration water present in aqueous solution. Nucleic Acids Res. 20:6549-6553.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 6549-6553
-
-
Liepinsh, E.1
Otting, G.2
Wüthrich3
-
59
-
-
0027403859
-
The structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: Conformational flexibility of B-DNA
-
Lipanov, A., M. L. Kopka, M. Kaczor-Grzeskowiak, J. Quintana, and R. E. Dickerson. 1993. The structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA. Biochemistry. 32:1373-1380.
-
(1993)
Biochemistry
, vol.32
, pp. 1373-1380
-
-
Lipanov, A.1
Kopka, M.L.2
Kaczor-Grzeskowiak, M.3
Quintana, J.4
Dickerson, R.E.5
-
60
-
-
0028799524
-
X-ray structure of a DNA decamer containing 7,8-dihydro-8-oxyguanine
-
Lipscomb, L. A., M. E. Peek, M. L. Morningstar, S. M. Verghis, E. M. Miller, A. Rich, J. M. Essigmann, and L. D. Williams. 1995. X-ray structure of a DNA decamer containing 7,8-dihydro-8-oxyguanine. Proc. Natl. Acad. Sci. USA. 92:719-723.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 719-723
-
-
Lipscomb, L.A.1
Peek, M.E.2
Morningstar, M.L.3
Verghis, S.M.4
Miller, E.M.5
Rich, A.6
Essigmann, J.M.7
Williams, L.D.8
-
61
-
-
0000067520
-
Repulsion of interfaces due to boundary water
-
Marcelja, S., and N. Radic. 1976. Repulsion of interfaces due to boundary water. Chem. Phys. Lett. 42:129-130.
-
(1976)
Chem. Phys. Lett.
, vol.42
, pp. 129-130
-
-
Marcelja, S.1
Radic, N.2
-
62
-
-
0022780441
-
Evidence for heterogeneity in DNA-associated solvent mobility from acridine phosphorescence spectra
-
Milton, J. G., and W. C. Galley. 1986. Evidence for heterogeneity in DNA-associated solvent mobility from acridine phosphorescence spectra. Biopolymers. 25:1673-1684.
-
(1986)
Biopolymers
, vol.25
, pp. 1673-1684
-
-
Milton, J.G.1
Galley, W.C.2
-
63
-
-
0029076479
-
Alternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA
-
Mooers, B. H. M., G. P. Schroth, W. W. Baxter, and P. S. Ho. 1995. Alternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA. J. Mol. Biol. 249:772-784.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 772-784
-
-
Mooers, B.H.M.1
Schroth, G.P.2
Baxter, W.W.3
Ho, P.S.4
-
64
-
-
0029145974
-
Direct observation of two base-pairing modes of a cytosine-thymine analogue with guanine in a DNA Z-form duplex: Significance for base analogue mutagenesis
-
Moore, M. H., L. VanMeervelt, S. A. Salisbury, P. Kong Thoo Lin, and D. M. Brown. 1995. Direct observation of two base-pairing modes of a cytosine-thymine analogue with guanine in a DNA Z-form duplex: significance for base analogue mutagenesis. J. Mol. Biol. 251:665-673.
-
(1995)
J. Mol. Biol.
, vol.251
, pp. 665-673
-
-
Moore, M.H.1
VanMeervelt, L.2
Salisbury, S.A.3
Kong Thoo Lin, P.4
Brown, D.M.5
-
65
-
-
0021375074
-
3-hybridized oxygen atoms and its relevance to ligand-macromolecule interactions
-
3-hybridized oxygen atoms and its relevance to ligand-macromolecule interactions. J. Am. Chem. Soc. 106:1018-1025.
-
(1984)
J. Am. Chem. Soc.
, vol.106
, pp. 1018-1025
-
-
Murray-Rust, P.1
Glusker, J.P.2
-
66
-
-
0030570768
-
Interaction between the left-handed Z-DNA and polyamine-2: The crystal structure of the d(CG)3 and spermidine complex
-
Ohishi H., I. Nakanishi, K. Inubushi, G. A. v. d. Marel, J. H. v. Boom, A. Rich, A. H.-J. Wang, T. Hakoshima, and K. Tomita. 1996. Interaction between the left-handed Z-DNA and polyamine-2: the crystal structure of the d(CG)3 and spermidine complex. FEBS Lett. 391:153-156.
-
(1996)
FEBS Lett.
, vol.391
, pp. 153-156
-
-
Ohishi, H.1
Nakanishi, I.2
Inubushi, K.3
Marel, G.A.V.D.4
Boom, J.H.V.5
Rich, A.6
Wang, A.H.-J.7
Hakoshima, T.8
Tomita, K.9
-
67
-
-
0028806321
-
Crystal and molecular structure of a new Z-DNA crystal form: d[CGT(2-NH2-A)CG] and its platinated derivative
-
Parkinson, G. N., G. M. Arvanitis, L. Lessinger, S. L. Ginell, R. Jones, B. Gaffney and H. M. Berman. 1995. Crystal and molecular structure of a new Z-DNA crystal form: d[CGT(2-NH2-A)CG] and its platinated derivative. Biochemistry. 34:15487-15495.
-
(1995)
Biochemistry
, vol.34
, pp. 15487-15495
-
-
Parkinson, G.N.1
Arvanitis, G.M.2
Lessinger, L.3
Ginell, S.L.4
Jones, R.5
Gaffney, B.6
Berman, H.M.7
-
68
-
-
0001908190
-
MAD phasing strategies explored with a brominated oligonucleotide crystal at 1.65 Ångstroms resolution
-
Peterson, M. R., S. J. Harrop, S. M. McSweeney, G. A. Leonard, A. W. Thompson, W. N. Hunter, and J. R. Helliwell. 1996. MAD phasing strategies explored with a brominated oligonucleotide crystal at 1.65 Ångstroms resolution. J. Synch. Radiat. 3:24-34.
-
(1996)
J. Synch. Radiat.
, vol.3
, pp. 24-34
-
-
Peterson, M.R.1
Harrop, S.J.2
McSweeney, S.M.3
Leonard, G.A.4
Thompson, A.W.5
Hunter, W.N.6
Helliwell, J.R.7
-
69
-
-
0023628497
-
Helix geometry, hydration, and G.A mismatch in a B-DNA decamer
-
Privé, G. G., U. Heinemann, S. Chandrasegaran, and L. S. Kan. 1987. Helix geometry, hydration, and G.A mismatch in a B-DNA decamer. Science. 238:498-504.
-
(1987)
Science
, vol.238
, pp. 498-504
-
-
Privé, G.G.1
Heinemann, U.2
Chandrasegaran, S.3
Kan, L.S.4
-
70
-
-
0026059567
-
Structure of the B-DNA decamer C-C-A-A-C-G-T-T-G-G and comparison with isomorphous decamers C-C-A-A-G-A-T-T-G-G and C-C-A-G-G-C-C-T-G-G
-
Privé, G. G., K. Yanagi, and R. E. Dickerson. 1991. Structure of the B-DNA decamer C-C-A-A-C-G-T-T-G-G and comparison with isomorphous decamers C-C-A-A-G-A-T-T-G-G and C-C-A-G-G-C-C-T-G-G. J. Mol. Biol. 217:177-199.
-
(1991)
J. Mol. Biol.
, vol.217
, pp. 177-199
-
-
Privé, G.G.1
Yanagi, K.2
Dickerson, R.E.3
-
71
-
-
0002586130
-
Quantum-mechanical studies of environmental effects on biomolecules. IV. Ab initio studies on the hydration scheme of the phosphate group
-
Pullman, B., A. Pullman, H. Berthod, and N. Gresh. 1975. Quantum-mechanical studies of environmental effects on biomolecules. IV. Ab initio studies on the hydration scheme of the phosphate group. Theor. Chim. Acta. 40:93-111.
-
(1975)
Theor. Chim. Acta
, vol.40
, pp. 93-111
-
-
Pullman, B.1
Pullman, A.2
Berthod, H.3
Gresh, N.4
-
72
-
-
0026624859
-
The structure of a B-DNA decamer with a central T-A step: C-G-A-T-T-A-A-T-C-G
-
Quintana, J. R., K. Grzeskowiak, K. Yanagi, and R. E. Dickerson. 1992. The structure of a B-DNA decamer with a central T-A step: C-G-A-T-T-A-A-T-C-G. J. Mol. Biol. 225:379-395.
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 379-395
-
-
Quintana, J.R.1
Grzeskowiak, K.2
Yanagi, K.3
Dickerson, R.E.4
-
73
-
-
0027522094
-
Evidence for crystal environment dominating base sequence effects on DNA conformation-crystal comparison with their isomorphous crystal structures
-
Ramakrishnan, B., and M. Sundaralingam. 1993a. Evidence for crystal environment dominating base sequence effects on DNA conformation-crystal comparison with their isomorphous crystal structures. Biochemistry. 32:11458-11468.
-
(1993)
Biochemistry
, vol.32
, pp. 11458-11468
-
-
Ramakrishnan, B.1
Sundaralingam, M.2
-
74
-
-
0027173244
-
High resolution crystal structure of the A-DNA decamer d(CCCGGCCGGG)-novel intermolecular base-paired G*(G.C) triplets
-
Ramakrishnan, B., and M. Sundaralingam. 1993b. High resolution crystal structure of the A-DNA decamer d(CCCGGCCGGG)-novel intermolecular base-paired G*(G.C) triplets. J. Mol. Biol. 231:431-444.
-
(1993)
J. Mol. Biol.
, vol.231
, pp. 431-444
-
-
Ramakrishnan, B.1
Sundaralingam, M.2
-
75
-
-
0029097869
-
Crystal structure of the A-DNA decamer d(CCIGGCCm(5)CGG) at 1.6 Ångstroms showing the unexpected wobble 1.m5c base pair
-
Ramakrishnan, B., and M. Sundaralingam. 1995. Crystal structure of the A-DNA decamer d(CCIGGCCm(5)CGG) at 1.6 Ångstroms showing the unexpected wobble 1.m5c base pair. Biophys. J. 69:553-558.
-
(1995)
Biophys. J.
, vol.69
, pp. 553-558
-
-
Ramakrishnan, B.1
Sundaralingam, M.2
-
76
-
-
0027520575
-
Aspects of protein energetics and dynamics
-
Rashin, A. A. 1993. Aspects of protein energetics and dynamics. Prog. Biophys. Mol. Biol. 60:73-200.
-
(1993)
Prog. Biophys. Mol. Biol.
, vol.60
, pp. 73-200
-
-
Rashin, A.A.1
-
77
-
-
0001533502
-
Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: Hydration forces between parallel DNA double helices
-
Rau, D. C., B. Lee, and V. A. Parsegian. 1984. Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices. Proc. Natl. Acad. Sci. USA. 81:2621-2625.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 2621-2625
-
-
Rau, D.C.1
Lee, B.2
Parsegian, V.A.3
-
78
-
-
0026558204
-
Direct measurement of the intermolecular forces between counterion-condensed DNA double helices
-
Rau, D. C., and V. A. Parsegian. 1992a. Direct measurement of the intermolecular forces between counterion-condensed DNA double helices. Biophys. J. 61:246-259.
-
(1992)
Biophys. J.
, vol.61
, pp. 246-259
-
-
Rau, D.C.1
Parsegian, V.A.2
-
79
-
-
0026608715
-
Direct measurement of temperature-dependent solvation forces between DNA double helices
-
Rau, D. C., and V. A. Parsegian. 1992b. Direct measurement of temperature-dependent solvation forces between DNA double helices. Biophys. J. 61:260-271.
-
(1992)
Biophys. J.
, vol.61
, pp. 260-271
-
-
Rau, D.C.1
Parsegian, V.A.2
-
80
-
-
0029037450
-
Sequence dependent microheterogeneity of Z-DNA: The crystal and molecular structures of d(CACGCG)·d(CGCGTG) and d(CGCACG)·d(CGTGCG)
-
Sadasivan, C., and N. Gautham. 1995. Sequence dependent microheterogeneity of Z-DNA: the crystal and molecular structures of d(CACGCG)·d(CGCGTG) and d(CGCACG)·d(CGTGCG). J. Mol. Biol. 248:918-930.
-
(1995)
J. Mol. Biol.
, vol.248
, pp. 918-930
-
-
Sadasivan, C.1
Gautham, N.2
-
81
-
-
0023061930
-
Structure and dynamics of water surrounding biomolecules
-
Saenger, W. 1987. Structure and dynamics of water surrounding biomolecules. Annu. Rev. Biophys. Biophys. Chem. 16:93-114.
-
(1987)
Annu. Rev. Biophys. Biophys. Chem.
, vol.16
, pp. 93-114
-
-
Saenger, W.1
-
82
-
-
0023029727
-
DNA conformation is determined by economics in the hydration of phosphate groups
-
Saenger, W., W. N. Hunter, and O. Kennard. 1986. DNA conformation is determined by economics in the hydration of phosphate groups. Nature. 324:385-388.
-
(1986)
Nature
, vol.324
, pp. 385-388
-
-
Saenger, W.1
Hunter, W.N.2
Kennard, O.3
-
83
-
-
0028823008
-
Hydration of the DNA bases is local
-
Schneider, B., and H. M. Berman. 1995. Hydration of the DNA bases is local. Biophys. J. 69:2661-2669.
-
(1995)
Biophys. J.
, vol.69
, pp. 2661-2669
-
-
Schneider, B.1
Berman, H.M.2
-
84
-
-
0027138869
-
A systematic method for studying the spatial distribution of water molecules around nucleic acid bases
-
Schneider, B., D. M. Cohen, L. Schleifer, A. R. Srinivasan, W. K. Olson, and H. M. Berman. 1993. A systematic method for studying the spatial distribution of water molecules around nucleic acid bases. Biophys. J. 65:2291-2303.
-
(1993)
Biophys. J.
, vol.65
, pp. 2291-2303
-
-
Schneider, B.1
Cohen, D.M.2
Schleifer, L.3
Srinivasan, A.R.4
Olson, W.K.5
Berman, H.M.6
-
85
-
-
0026806374
-
Crystal and molecular structure of a DNA fragment containing a 2-aminoadenine modification: The relationship between conformation, packing, and hydration in Z-DNA hexamers
-
Schneider, B., S. L. Ginell, R. Jones, B. Gaffney, and H. M. Berman. 1992. Crystal and molecular structure of a DNA fragment containing a 2-aminoadenine modification: the relationship between conformation, packing, and hydration in Z-DNA hexamers. Biochemistry. 31:9622-9628.
-
(1992)
Biochemistry
, vol.31
, pp. 9622-9628
-
-
Schneider, B.1
Ginell, S.L.2
Jones, R.3
Gaffney, B.4
Berman, H.M.5
-
86
-
-
0032515407
-
Stereochemistry of binding of metal cations and water to a phosphate group
-
Schneider, B., and M. Kabelác. 1998. Stereochemistry of binding of metal cations and water to a phosphate group. J. Am. Chem. Soc. 120:161-165.
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 161-165
-
-
Schneider, B.1
Kabelác, M.2
-
87
-
-
0031195002
-
Conformations of the sugar-phosphate backbone in helical DNA crystal structures
-
Schneider, B., S. Neidle, and H. M. Berman. 1997. Conformations of the sugar-phosphate backbone in helical DNA crystal structures. Biopolymers. 42:113-124.
-
(1997)
Biopolymers
, vol.42
, pp. 113-124
-
-
Schneider, B.1
Neidle, S.2
Berman, H.M.3
-
88
-
-
0025965351
-
NMR spin grouping and correlation exchange analysis-application to low hydration NaDNA paracrystals
-
Schreiner, L. J., J. C. Mactavish, M. M. Pintar, and A. Rupprecht. 1991. NMR spin grouping and correlation exchange analysis-application to low hydration NaDNA paracrystals. Biophys. J. 59:221-234.
-
(1991)
Biophys. J.
, vol.59
, pp. 221-234
-
-
Schreiner, L.J.1
Mactavish, J.C.2
Pintar, M.M.3
Rupprecht, A.4
-
89
-
-
0023703882
-
Hydration of NaDNA by neutron quasi-elastic scattering
-
Schreiner, L. J., M. M. Pintar, A. J. Dianoux, F. Volino, and A. Rupprecht. 1988. Hydration of NaDNA by neutron quasi-elastic scattering. Biophvs. J. 53:119-122.
-
(1988)
Biophvs. J.
, vol.53
, pp. 119-122
-
-
Schreiner, L.J.1
Pintar, M.M.2
Dianoux, A.J.3
Volino, F.4
Rupprecht, A.5
-
90
-
-
84965102253
-
RNA double helical fragments at atomic resolution. I. The crystal and molecular structure of sodium adenylyl-3′-5′-uridine hexahydrate
-
Seeman, N. C., J. M. Rosenberg, F. L. Suddath, J. J. P. Kim, and A. Rich. 1976. RNA double helical fragments at atomic resolution. I. The crystal and molecular structure of sodium adenylyl-3′-5′-uridine hexahydrate. J. Mol. Biol. 104:109-144.
-
(1976)
J. Mol. Biol.
, vol.104
, pp. 109-144
-
-
Seeman, N.C.1
Rosenberg, J.M.2
Suddath, F.L.3
Kim, J.J.P.4
Rich, A.5
-
91
-
-
0024462296
-
The conformation of the DNA double helix in the crystal is dependent on its environment
-
Shakked, Z., G. Guerstein-Guzikevich, M. Eisenstein, F. Frolow, and D. Rabinovich. 1989. The conformation of the DNA double helix in the crystal is dependent on its environment. Nature. 342:456-460.
-
(1989)
Nature
, vol.342
, pp. 456-460
-
-
Shakked, Z.1
Guerstein-Guzikevich, G.2
Eisenstein, M.3
Frolow, F.4
Rabinovich, D.5
-
93
-
-
0032499635
-
The B-DNA dodecamer at high resolution reveals a spine of water on sodium
-
Shui, X., L. McFail-Isom, G. G. Hu, and L. D. Williams. 1998. The B-DNA dodecamer at high resolution reveals a spine of water on sodium. Biochemistry. 37:8341-8355.
-
(1998)
Biochemistry
, vol.37
, pp. 8341-8355
-
-
Shui, X.1
McFail-Isom, L.2
Hu, G.G.3
Williams, L.D.4
-
94
-
-
33751158897
-
Modeling solvent in biomolecular systems
-
Smith, P. E., and B. M. Pettitt. 1994. Modeling solvent in biomolecular systems. J. Phys. Chem. 98:9700-9711.
-
(1994)
J. Phys. Chem.
, vol.98
, pp. 9700-9711
-
-
Smith, P.E.1
Pettitt, B.M.2
-
95
-
-
0024121512
-
Theoretical considerations on the "spine of hydration" in the minor groove of d(CGCGAATTCGCG)-d(GCGCTTAAGCGC): Monte Carlo computer simulation
-
Subramanian, P. S., G. Ravishanker, and D. L. Beveridge. 1988. Theoretical considerations on the "spine of hydration" in the minor groove of d(CGCGAATTCGCG)-d(GCGCTTAAGCGC): Monte Carlo computer simulation. Proc. Natl. Acad. Sci. USA. 85:1836-1840.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 1836-1840
-
-
Subramanian, P.S.1
Ravishanker, G.2
Beveridge, D.L.3
-
96
-
-
0023284697
-
The dynamics of the DNA hydration shell at gigahertz frequencies
-
Tao, N. J., S. M. Linsday, and A. Rupprecht. 1987. The dynamics of the DNA hydration shell at gigahertz frequencies. Biopolymers. 26: 171-188.
-
(1987)
Biopolymers
, vol.26
, pp. 171-188
-
-
Tao, N.J.1
Linsday, S.M.2
Rupprecht, A.3
-
97
-
-
0017806585
-
Nucleic acid-water interactions
-
Texter, J. 1978. Nucleic acid-water interactions. Prog. Biophys. Mol. Biol. 33:83-97.
-
(1978)
Prog. Biophys. Mol. Biol.
, vol.33
, pp. 83-97
-
-
Texter, J.1
-
98
-
-
0000544965
-
High resolution refinement of the hexagonal A-DNA octamer d(GTGTA-CAC) at 1.4 Ångstroms resolution
-
Thota, N., X. H. Li, C. Bingman, and M. Sundaralingam. 1993. High resolution refinement of the hexagonal A-DNA octamer d(GTGTA-CAC) at 1.4 Ångstroms resolution. Acta. Crystallogr. D. 49:282-291.
-
(1993)
Acta. Crystallogr. D
, vol.49
, pp. 282-291
-
-
Thota, N.1
Li, X.H.2
Bingman, C.3
Sundaralingam, M.4
-
99
-
-
0030754556
-
Methylation of the Z-DNA decamer d(GC)5 potentiates the formation of A-DNA: Crystal structure of d(Gm5CGm5CGCGCGC)
-
Tippin, D. B., B. Ramakrishnan, and M. Sundaralingam. 1997. Methylation of the Z-DNA decamer d(GC)5 potentiates the formation of A-DNA: crystal structure of d(Gm5CGm5CGCGCGC). J. Mol. Biol. 270: 247-258.
-
(1997)
J. Mol. Biol.
, vol.270
, pp. 247-258
-
-
Tippin, D.B.1
Ramakrishnan, B.2
Sundaralingam, M.3
-
100
-
-
0030498825
-
Structure of d(CCCTAGGG): Comparison with nine isomorphous octamer sequences reveals four distinct patterns of sequence-dependent intermolecular interactions
-
Tippin, D. B., and M. Sundaralingam. 1996. Structure of d(CCCTAGGG): comparison with nine isomorphous octamer sequences reveals four distinct patterns of sequence-dependent intermolecular interactions. Acta Crystallogr. D. 52:997-1003.
-
(1996)
Acta Crystallogr. D
, vol.52
, pp. 997-1003
-
-
Tippin, D.B.1
Sundaralingam, M.2
-
102
-
-
0025633259
-
Molecular and crystal structure of d(CGCGmo4CG). N4-methoxycytosine/guanine base-pairs in Z-DNA
-
Van Meervelt, L., M. H. Moore, P. K. T. Lin, D. M. Brown, and O. Kennard. 1990. Molecular and crystal structure of d(CGCGmo4CG). N4-methoxycytosine/guanine base-pairs in Z-DNA. J. Mol. Biol. 216: 773-781.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 773-781
-
-
Van Meervelt, L.1
Moore, M.H.2
Lin, P.K.T.3
Brown, D.M.4
Kennard, O.5
-
103
-
-
0023107514
-
Why structured water causes sharp absorption by DNA at microwave frequencies
-
van Zandt, L. L. 1987. Why structured water causes sharp absorption by DNA at microwave frequencies. J. Biomol. Struct. Dyn. 4:569-582.
-
(1987)
J. Biomol. Struct. Dyn.
, vol.4
, pp. 569-582
-
-
Van Zandt, L.L.1
-
104
-
-
0043203406
-
Crystal structures of A-DNA duplexes
-
Wahl, M. C., and M. Sundaralingam. 1997. Crystal structures of A-DNA duplexes. Biopolymers. 44:45-63.
-
(1997)
Biopolymers
, vol.44
, pp. 45-63
-
-
Wahl, M.C.1
Sundaralingam, M.2
-
105
-
-
0018689799
-
Molecular structure of a left-handed double helical DNA fragment at atomic resolution
-
Wang, A. H.-J., G. J. Quigley, F. J. Kolpak, J. L. Crawford, J. H. van Boom, G. A. van der Marel, and A. Rich. 1979. Molecular structure of a left-handed double helical DNA fragment at atomic resolution. Nature. 282:680-686.
-
(1979)
Nature
, vol.282
, pp. 680-686
-
-
Wang, A.H.-J.1
Quigley, G.J.2
Kolpak, F.J.3
Crawford, J.L.4
Van Boom, J.H.5
Van Der Marel, G.A.6
Rich, A.7
-
106
-
-
0019875825
-
Left-handed double helical DNA: Variations in the backbone conformation
-
Wane, A. H.-J., G. J. Quigley, F. J. Kolpak, G. A. van der Marel, J. H. van Boom, and A. Rich. 1981. Left-handed double helical DNA: variations in the backbone conformation. Science. 211:171-176.
-
(1981)
Science
, vol.211
, pp. 171-176
-
-
Wane, A.H.-J.1
Quigley, G.J.2
Kolpak, F.J.3
Van Der Marel, G.A.4
Van Boom, J.H.5
Rich, A.6
-
107
-
-
0023708040
-
Water: An integral part of nucleic acid structure
-
Westhof, E. 1988. Water: an integral part of nucleic acid structure. Annu. Rev. Biophys. Biophys. Chem. 17:125-144.
-
(1988)
Annu. Rev. Biophys. Biophys. Chem.
, vol.17
, pp. 125-144
-
-
Westhof, E.1
-
108
-
-
0000514393
-
Structural water bridges in nucleic acids
-
E. Westhof, editor. CRC Press, Boca Raton, FL
-
Westhof, E. 1993. Structural water bridges in nucleic acids. In Water and Biological Macromolecules. E. Westhof, editor. CRC Press, Boca Raton, FL. 5:226-243.
-
(1993)
Water and Biological Macromolecules
, vol.5
, pp. 226-243
-
-
Westhof, E.1
-
110
-
-
0013489862
-
Structure of the DNA octanucleotide d(ACGTACGT)2
-
Willcock, D. J., A. Adams, C. J. Cardin, and L. P. G. Wakelin. 1996. Structure of the DNA octanucleotide d(ACGTACGT)2. Acta Crystallogr. D. 52:481-485.
-
(1996)
Acta Crystallogr. D
, vol.52
, pp. 481-485
-
-
Willcock, D.J.1
Adams, A.2
Cardin, C.J.3
Wakelin, L.P.G.4
-
111
-
-
0027815738
-
Hydration of biological macromolecules in solution: Surface structure and molecular recognition
-
Wüthrich, K. 1993. Hydration of biological macromolecules in solution: surface structure and molecular recognition. Cold Spring Harb. Symp. Quant. Biol. 149-157.
-
(1993)
Cold Spring Harb. Symp. Quant. Biol.
, pp. 149-157
-
-
Wüthrich, K.1
-
112
-
-
0031047279
-
Intrusion of counterions into the spine of hydration in the minor groove of B-DNA: Fractional occupancy of electronegative pockets
-
Young, M. A., B. Jayaram, and D. L. Beveridge. 1997a. Intrusion of counterions into the spine of hydration in the minor groove of B-DNA: fractional occupancy of electronegative pockets. J. Am. Chem. Soc. 119:59-69.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 59-69
-
-
Young, M.A.1
Jayaram, B.2
Beveridge, D.L.3
-
113
-
-
0030862276
-
A 5-nano-second molecular dynamics trajectory for B-DNA: Analysis of structure, motions, and solvation
-
Young, M. A., G. Ravishanker, and D. L. Beveridge. 1997b. A 5-nano-second molecular dynamics trajectory for B-DNA: analysis of structure, motions, and solvation. Biophys. J. 73:2313-2336.
-
(1997)
Biophys. J.
, vol.73
, pp. 2313-2336
-
-
Young, M.A.1
Ravishanker, G.2
Beveridge, D.L.3
-
114
-
-
0026649309
-
Alternative structures for alternating poly (dA-dT) tracts: The structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G
-
Yuan, H., J. Quintana, and R. E. Dickerson. 1992. Alternative structures for alternating poly (dA-dT) tracts: the structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G. Biochemistry. 31:8009-9021.
-
(1992)
Biochemistry
, vol.31
, pp. 8009-9021
-
-
Yuan, H.1
Quintana, J.2
Dickerson, R.E.3
|