메뉴 건너뛰기




Volumn 12, Issue 8, 2011, Pages 483-492

Multisubunit RNA polymerases IV and V: Purveyors of non-coding RNA for plant gene silencing

Author keywords

[No Author keywords available]

Indexed keywords

DNA DIRECTED RNA POLYMERASE; DNA DIRECTED RNA POLYMERASE III; RNA POLYMERASE; RNA POLYMERASE II; RNA POLYMERASE IV; RNA POLYMERASE V; UNCLASSIFIED DRUG; UNTRANSLATED RNA;

EID: 79960716754     PISSN: 14710072     EISSN: 14710080     Source Type: Journal    
DOI: 10.1038/nrm3152     Document Type: Review
Times cited : (327)

References (100)
  • 1
    • 78651504121 scopus 로고    scopus 로고
    • Evolution of multisubunit RNA polymerases in the three domains of life
    • Werner, F. & Grohmann, D. Evolution of multisubunit RNA polymerases in the three domains of life. Nature Rev. Microbiol. 9, 85-98 (2011).
    • (2011) Nature Rev. Microbiol. , vol.9 , pp. 85-98
    • Werner, F.1    Grohmann, D.2
  • 2
    • 48249103199 scopus 로고    scopus 로고
    • Structure of eukaryotic RNA polymerases
    • Cramer, P. et al. Structure of eukaryotic RNA polymerases. Annu. Rev. Biophys. 37, 337-352 (2008).
    • (2008) Annu. Rev. Biophys. , vol.37 , pp. 337-352
    • Cramer, P.1
  • 3
    • 77449116618 scopus 로고    scopus 로고
    • Plant-specific multisubunit RNA polymerase in gene silencing
    • Lahmy, S., Bies-Etheve, N. & Lagrange, T. Plant-specific multisubunit RNA polymerase in gene silencing. Epigenetics 5, 4-8 (2010).
    • (2010) Epigenetics , vol.5 , pp. 4-8
    • Lahmy, S.1    Bies-Etheve, N.2    Lagrange, T.3
  • 5
    • 26944452405 scopus 로고    scopus 로고
    • Pathways through the small RNA world of plants
    • DOI 10.1016/j.febslet.2005.08.040, PII S0014579305010367, RNAi: Mechanisms, Biology and Applications
    • Herr, A. J. Pathways through the small RNA world of plants. FEBS Lett. 579, 5879-5888 (2005). (Pubitemid 41484133)
    • (2005) FEBS Letters , vol.579 , Issue.26 , pp. 5879-5888
    • Herr, A.J.1
  • 6
    • 58149469958 scopus 로고    scopus 로고
    • Metal A and Metal B sites of nuclear RNA polymerases Pol IV and Pol v are required for siRNA-dependent DNA methylation and gene silencing
    • Haag, J. R., Pontes, O. & Pikaard, C. S. Metal A and Metal B sites of nuclear RNA polymerases Pol IV and Pol V are required for siRNA-dependent DNA methylation and gene silencing. PLoS ONE 4, e4110 (2009).
    • (2009) PLoS ONE , vol.4
    • Haag, J.R.1    Pontes, O.2    Pikaard, C.S.3
  • 7
    • 61449250649 scopus 로고    scopus 로고
    • Functional divergence in the growing family of RNA polymerases
    • Landick, R. Functional divergence in the growing family of RNA polymerases. Structure 17, 323-325 (2009).
    • (2009) Structure , vol.17 , pp. 323-325
    • Landick, R.1
  • 8
    • 79960725352 scopus 로고    scopus 로고
    • Evolutionary history of plant multisubunit RNA polymerases IV and V: Subunit origins via genome-wide and segmental gene duplications, retrotransposition, and lineage-specific subfunctionalization
    • Tucker, S. L., Reece, J., Ream, T. S. & Pikaard, C. S. Evolutionary history of plant multisubunit RNA polymerases IV and V: subunit origins via genome-wide and segmental gene duplications, retrotransposition, and lineage-specific subfunctionalization. Cold Spring Harb. Symp. Quant. Biol. 75, 285-297 (2011).
    • (2011) Cold Spring Harb. Symp. Quant. Biol. , vol.75 , pp. 285-297
    • Tucker, S.L.1    Reece, J.2    Ream, T.S.3    Pikaard, C.S.4
  • 9
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815 (2000).
    • (2000) Nature , vol.408 , pp. 796-815
  • 10
    • 14844295120 scopus 로고    scopus 로고
    • RNA polymerase IV directs silencing of endogenous DNA
    • DOI 10.1126/science.1106910
    • Herr, A. J., Jensen, M. B., Dalmay, T. & Baulcombe, D. C. RNA polymerase IV directs silencing of endogenous DNA. Science 308, 118-120 (2005). (Pubitemid 40471011)
    • (2005) Science , vol.308 , Issue.5718 , pp. 118-120
    • Herr, A.J.1    Jensen, M.B.2    Dalmay, T.3    Baulcombe, D.C.4
  • 11
    • 14844302397 scopus 로고    scopus 로고
    • Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation- dependent heterochromatin formation
    • DOI 10.1016/j.cell.2005.02.007
    • Onodera, Y. et al. Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120, 613-622 (2005). (Pubitemid 40343074)
    • (2005) Cell , vol.120 , Issue.5 , pp. 613-622
    • Onodera, Y.1    Haag, J.R.2    Ream, T.3    Nunes, P.C.4    Pontes, O.5    Pikaard, C.S.6
  • 14
    • 55449131096 scopus 로고    scopus 로고
    • Noncoding transcription by RNA polymerase Pol IVb/Pol v mediates transcriptional silencing of overlapping and adjacent genes
    • Wierzbicki, A. T., Haag, J. R. & Pikaard, C. S. Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes. Cell 135, 635-648 (2008).
    • (2008) Cell , vol.135 , pp. 635-648
    • Wierzbicki, A.T.1    Haag, J.R.2    Pikaard, C.S.3
  • 15
    • 58649104893 scopus 로고    scopus 로고
    • Subunit compositions of the RNA-silencing enzymes Pol IV and Pol v reveal their origins as specialized forms of RNA polymerase II
    • Ream, T. S. et al. Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II. Mol. Cell 33, 192-203 (2009).
    • (2009) Mol. Cell , vol.33 , pp. 192-203
    • Ream, T.S.1
  • 16
    • 58149271019 scopus 로고    scopus 로고
    • An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II
    • Huang, L. et al. An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II. Nature Struct. Mol. Biol. 16, 91-93 (2009).
    • (2009) Nature Struct. Mol. Biol. , vol.16 , pp. 91-93
    • Huang, L.1
  • 19
    • 33745561418 scopus 로고    scopus 로고
    • Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis
    • DOI 10.1038/sj.emboj.7601150, PII 7601150
    • Huettel, B. et al. Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis. EMBO J. 25, 2828-2836 (2006). (Pubitemid 43980389)
    • (2006) EMBO Journal , vol.25 , Issue.12 , pp. 2828-2836
    • Huettel, B.1    Kanno, T.2    Daxinger, L.3    Aufsatz, W.4    Matzke, A.J.M.5    Matzke, M.6
  • 20
    • 77949337274 scopus 로고    scopus 로고
    • RNA silencing directed against geminiviruses: Post-transcriptional and epigenetic components
    • Raja, P., Wolf, J. N. & Bisaro, D. M. RNA silencing directed against geminiviruses: post-transcriptional and epigenetic components. Biochim. Biophys. Acta 1799, 337-351 (2010).
    • (2010) Biochim. Biophys. Acta , vol.1799 , pp. 337-351
    • Raja, P.1    Wolf, J.N.2    Bisaro, D.M.3
  • 21
    • 33745690105 scopus 로고    scopus 로고
    • The Arabidopsis Chromatin-Modifying Nuclear siRNA Pathway Involves a Nucleolar RNA Processing Center
    • DOI 10.1016/j.cell.2006.05.031, PII S0092867406007537
    • Pontes, O. et al. The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center. Cell 126, 79-92 (2006). (Pubitemid 44026550)
    • (2006) Cell , vol.126 , Issue.1 , pp. 79-92
    • Pontes, O.1    Li, C.F.2    Nunes, P.C.3    Haag, J.4    Ream, T.5    Vitins, A.6    Jacobsen, S.E.7    Pikaard, C.S.8
  • 22
    • 33947236065 scopus 로고    scopus 로고
    • Genome-wide profiling and analysis of Arabidopsis siRNAs
    • Kasschau, K. D. et al. Genome-wide profiling and analysis of Arabidopsis siRNAs. PLoS Biol. 5, e57 (2007).
    • (2007) PLoS Biol. , vol.5
    • Kasschau, K.D.1
  • 23
    • 19344374219 scopus 로고    scopus 로고
    • Genetic and functional diversification of small RNA pathways in plants
    • Xie, Z. et al. Genetic and functional diversification of small RNA pathways in plants. PLoS Biol. 2, 642-652 (2004).
    • (2004) PLoS Biol , vol.2 , pp. 642-652
    • Xie, Z.1
  • 25
    • 23044478505 scopus 로고    scopus 로고
    • Biochemical specialization within Arabidopsis RNA silencing pathways
    • DOI 10.1016/j.molcel.2005.06.014, PII S1097276505013936
    • Qi, Y., Denli, A. M. & Hannon, G. J. Biochemical specialization within Arabidopsis RNA silencing pathways. Mol. Cell 19, 421-428 (2005). (Pubitemid 41074895)
    • (2005) Molecular Cell , vol.19 , Issue.3 , pp. 421-428
    • Qi, Y.1    Denli, A.M.2    Hannon, G.J.3
  • 26
    • 33745279055 scopus 로고    scopus 로고
    • Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning
    • DOI 10.1038/ng1804, PII N1804
    • Henderson, I. R. et al. Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning. Nature Genet. 38, 721-725 (2006). (Pubitemid 43927318)
    • (2006) Nature Genetics , vol.38 , Issue.6 , pp. 721-725
    • Henderson, I.R.1    Zhang, X.2    Lu, C.3    Johnson, L.4    Meyers, B.C.5    Green, P.J.6    Jacobsen, S.E.7
  • 28
    • 23944493378 scopus 로고    scopus 로고
    • Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis
    • DOI 10.1016/j.cub.2005.07.029, PII S0960982205007736
    • Li, J., Yang, Z., Yu, B., Liu, J. & Chen, X. Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis. Curr. Biol. 15, 1501-1507 (2005). (Pubitemid 41187490)
    • (2005) Current Biology , vol.15 , Issue.16 , pp. 1501-1507
    • Li, J.1    Yang, Z.2    Yu, B.3    Liu, J.4    Chen, X.5
  • 29
    • 77950342461 scopus 로고    scopus 로고
    • The Arabidopsis RNA-directed DNA methylation Argonautes functionally diverge based on their expression and interaction with target loci
    • Havecker, E. R. et al. The Arabidopsis RNA-directed DNA methylation Argonautes functionally diverge based on their expression and interaction with target loci. Plant Cell 22, 321-334 (2010).
    • (2010) Plant Cell , vol.22 , pp. 321-334
    • Havecker, E.R.1
  • 30
    • 33750435234 scopus 로고    scopus 로고
    • Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation
    • DOI 10.1038/nature05198, PII NATURE05198
    • Qi, Y. et al. Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation. Nature 443, 1008-1012 (2006). (Pubitemid 44646179)
    • (2006) Nature , vol.443 , Issue.7114 , pp. 1008-1012
    • Qi, Y.1    He, X.2    Wang, X.-J.3    Kohany, O.4    Jurka, J.5    Hannon, G.J.6
  • 31
    • 10744225153 scopus 로고    scopus 로고
    • Asymmetry in the assembly of the RNAi enzyme complex
    • DOI 10.1016/S0092-8674(03)00759-1
    • Schwarz, D. S. et al. Asymmetry in the assembly of the RNAi enzyme complex. Cell 115, 199-208 (2003). (Pubitemid 37329583)
    • (2003) Cell , vol.115 , Issue.2 , pp. 199-208
    • Schwarz, D.S.1    Hutvagner, G.2    Du, T.3    Xu, Z.4    Aronin, N.5    Zamore, P.D.6
  • 32
    • 41349114789 scopus 로고    scopus 로고
    • Sorting of small RNAs into Arabidopsis Argonaute complexes is directed by the 5′ terminal nucleotide
    • Mi, S. et al. Sorting of small RNAs into Arabidopsis Argonaute complexes is directed by the 5′ terminal nucleotide. Cell 133, 116-127 (2008).
    • (2008) Cell , vol.133 , pp. 116-127
    • Mi, S.1
  • 33
    • 41149158475 scopus 로고    scopus 로고
    • Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation
    • Montgomery, T. A. et al. Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation. Cell 133, 128-141 (2008).
    • (2008) Cell , vol.133 , pp. 128-141
    • Montgomery, T.A.1
  • 34
    • 33745699398 scopus 로고    scopus 로고
    • An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana
    • Li, C. F. et al. An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana. Cell 126, 93-106 (2006).
    • (2006) Cell , vol.126 , pp. 93-106
    • Li, C.F.1
  • 35
    • 2342505910 scopus 로고    scopus 로고
    • Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation
    • DOI 10.1016/j.cub.2004.04.037, PII S0960982204002672
    • Kanno, T. et al. Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation. Curr. Biol. 14, 801-805 (2004). (Pubitemid 38583716)
    • (2004) Current Biology , vol.14 , Issue.9 , pp. 801-805
    • Kanno, T.1    Mette, M.F.2    Kreil, D.P.3    Aufsatz, W.4    Matzke, M.5    Matzke, A.J.M.6
  • 37
    • 71449098588 scopus 로고    scopus 로고
    • IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana
    • Ausin, I., Mockler, T. C., Chory, J. & Jacobsen, S. E. IDN1 and IDN2 are required for de novo DNA methylation in Arabidopsis thaliana. Nature Struct. Mol. Biol. 16, 1325-1327 (2009).
    • (2009) Nature Struct. Mol. Biol. , vol.16 , pp. 1325-1327
    • Ausin, I.1    Mockler, T.C.2    Chory, J.3    Jacobsen, S.E.4
  • 38
    • 77952090735 scopus 로고    scopus 로고
    • An RNA polymerase II-and AGO4-associated protein acts in RNA-directed DNA methylation
    • Gao, Z. et al. An RNA polymerase II-and AGO4-associated protein acts in RNA-directed DNA methylation. Nature 465, 106-109 (2010).
    • (2010) Nature , vol.465 , pp. 106-109
    • Gao, Z.1
  • 39
    • 67349112845 scopus 로고    scopus 로고
    • RNA polymerase v transcription guides ARGONAUTE4 to chromatin
    • Wierzbicki, A. T., Ream, T. S., Haag, J. R. & Pikaard, C. S. RNA polymerase V transcription guides ARGONAUTE4 to chromatin. Nature Genet. 41, 630-634 (2009).
    • (2009) Nature Genet , vol.41 , pp. 630-634
    • Wierzbicki, A.T.1    Ream, T.S.2    Haag, J.R.3    Pikaard, C.S.4
  • 40
    • 77953129746 scopus 로고    scopus 로고
    • A protein complex required for polymerase v transcripts and RNA-directed DNA methylation in Arabidopsis
    • Law, J. A. et al. A protein complex required for polymerase V transcripts and RNA-directed DNA methylation in Arabidopsis. Curr. Biol. 20, 951-956 (2010).
    • (2010) Curr. Biol. , vol.20 , pp. 951-956
    • Law, J.A.1
  • 41
    • 72549089751 scopus 로고    scopus 로고
    • A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development
    • He, X. J. et al. A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development. Genes Dev. 23, 2717-2722 (2009).
    • (2009) Genes Dev. , vol.23 , pp. 2717-2722
    • He, X.J.1
  • 42
    • 74149084294 scopus 로고    scopus 로고
    • RNA-directed DNA methylation and plant development require an IWR1-type transcription factor
    • Kanno, T. et al. RNA-directed DNA methylation and plant development require an IWR1-type transcription factor. EMBO Rep. 11, 65-71 (2010).
    • (2010) EMBO Rep , vol.11 , pp. 65-71
    • Kanno, T.1
  • 44
    • 1542580444 scopus 로고    scopus 로고
    • DCL is a plant-specific protein required for plastid ribosomal RNA processing and embryo development
    • DOI 10.1023/B:PLAN.0000019061.79773.06
    • Bellaoui, M., Keddie, J. S. & Gruissem, W. DCL is a plant-specific protein required for plastid ribosomal RNA processing and embryo development. Plant Mol. Biol. 53, 531-543 (2003). (Pubitemid 38345345)
    • (2003) Plant Molecular Biology , vol.53 , Issue.4 , pp. 531-543
    • Bellaoui, M.1    Keddie, J.S.2    Gruissem, W.3
  • 46
    • 4444302947 scopus 로고    scopus 로고
    • Crystal structure of argonaute and its implications for RISC slicer activity
    • DOI 10.1126/science.1102514
    • Song, J. J., Smith, S. K., Hannon, G. J. & Joshua-Tor, L. Crystal structure of Argonaute and its implications for RISC slicer activity. Science 305, 1434-1437 (2004). (Pubitemid 39167656)
    • (2004) Science , vol.305 , Issue.5689 , pp. 1434-1437
    • Song, J.-J.1    Smith, S.K.2    Hannon, G.J.3    Joshua-Tor, L.4
  • 48
    • 33947586544 scopus 로고    scopus 로고
    • Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing
    • DOI 10.1038/sj.emboj.7601603, PII 7601603
    • Zheng, X., Zhu, J., Kapoor, A. & Zhu, J. K. Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing. EMBO J. 26, 1691-1701 (2007). (Pubitemid 46480931)
    • (2007) EMBO Journal , vol.26 , Issue.6 , pp. 1691-1701
    • Zheng, X.1    Zhu, J.2    Kapoor, A.3    Zhu, J.-K.4
  • 49
    • 77951824122 scopus 로고    scopus 로고
    • An SGS3-like protein functions in RNA-directed DNA methylation and transcriptional gene silencing in Arabidopsis
    • Zheng, Z. et al. An SGS3-like protein functions in RNA-directed DNA methylation and transcriptional gene silencing in Arabidopsis. Plant J. 62, 92-99 (2010).
    • (2010) Plant J. , vol.62 , pp. 92-99
    • Zheng, Z.1
  • 50
    • 77249170184 scopus 로고    scopus 로고
    • Establishing maintaining and modifying DNA methylation patterns in plants and animals
    • Law, J. A. & Jacobsen, S. E. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nature Rev. Genet. 11, 204-220 (2010).
    • (2010) Nature Rev. Genet. , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 51
    • 67349099134 scopus 로고    scopus 로고
    • RNA-directed DNA methylation requires an AGO4-interacting member of the SPT5 elongation factor family
    • Bies-Etheve, N. et al. RNA-directed DNA methylation requires an AGO4-interacting member of the SPT5 elongation factor family. EMBO Rep. 10, 649-654 (2009).
    • (2009) EMBO Rep. , vol.10 , pp. 649-654
    • Bies-Etheve, N.1
  • 52
    • 65249093731 scopus 로고    scopus 로고
    • An effector of RNA-directed DNA methylation in Arabidopsis is an ARGONAUTE 4-and RNA-binding protein
    • He, X. J. et al. An effector of RNA-directed DNA methylation in Arabidopsis is an ARGONAUTE 4-and RNA-binding protein. Cell 137, 498-508 (2009).
    • (2009) Cell , vol.137 , pp. 498-508
    • He, X.J.1
  • 54
    • 42749087226 scopus 로고    scopus 로고
    • Highly integrated single-base resolution maps of the epigenome in Arabidopsis
    • Lister, R. et al. Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell 133, 523-536 (2008).
    • (2008) Cell , vol.133 , pp. 523-536
    • Lister, R.1
  • 55
    • 0037121952 scopus 로고    scopus 로고
    • HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA
    • DOI 10.1093/emboj/cdf663
    • Aufsatz, W., Mette, M. F., Van Der Winden, J., Matzke, M. & Matzke, A. J. HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA. EMBO J. 21, 6832-6841 (2002). (Pubitemid 36014555)
    • (2002) EMBO Journal , vol.21 , Issue.24 , pp. 6832-6841
    • Aufsatz, W.1    Mette, M.F.2    Van Der Winden, J.3    Matzke, M.4    Matzke, A.J.M.5
  • 56
    • 59949097829 scopus 로고    scopus 로고
    • NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and v and is required for RNA-directed DNA methylation
    • He, X. J. et al. NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation. Genes Dev. 23, 318-330 (2009).
    • (2009) Genes Dev , vol.23 , pp. 318-330
    • He, X.J.1
  • 57
    • 77953079177 scopus 로고    scopus 로고
    • Mechanisms of HDA6-mediated rRNA gene silencing: Suppression of intergenic Pol II transcription and differential effects on maintenance versus siRNA-directed cytosine methylation
    • Earley, K. W. et al. Mechanisms of HDA6-mediated rRNA gene silencing: suppression of intergenic Pol II transcription and differential effects on maintenance versus siRNA-directed cytosine methylation. Genes Dev. 24, 1119-1132 (2010).
    • (2010) Genes Dev. , vol.24 , pp. 1119-1132
    • Earley, K.W.1
  • 59
    • 77952352352 scopus 로고    scopus 로고
    • JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis
    • Searle, I. R., Pontes, O., Melnyk, C. W., Smith, L. M. & Baulcombe, D. C. JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis. Genes Dev. 24, 986-991 (2010).
    • (2010) Genes Dev , vol.24 , pp. 986-991
    • Searle, I.R.1    Pontes, O.2    Melnyk, C.W.3    Smith, L.M.4    Baulcombe, D.C.5
  • 60
    • 78649485519 scopus 로고    scopus 로고
    • Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation
    • Deleris, A. et al. Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation. EMBO Rep. 11, 950-955 (2010).
    • (2010) EMBO Rep. , vol.11 , pp. 950-955
    • Deleris, A.1
  • 61
    • 77949269527 scopus 로고    scopus 로고
    • JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis
    • Lu, F., Cui, X., Zhang, S., Liu, C. & Cao, X. JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis. Cell Res. 20, 387-390 (2010).
    • (2010) Cell Res. , vol.20 , pp. 387-390
    • Lu, F.1    Cui, X.2    Zhang, S.3    Liu, C.4    Cao, X.5
  • 62
    • 22344434734 scopus 로고    scopus 로고
    • Molecular Biology: RNA polymerase II is required for RNAi-dependent heterochromatin assembly
    • DOI 10.1126/science.1114955
    • Kato, H. et al. RNA polymerase II is required for RNAi-dependent heterochromatin assembly. Science 309, 467-469 (2005). (Pubitemid 40994685)
    • (2005) Science , vol.309 , Issue.5733 , pp. 467-469
    • Kato, H.1    Goto, D.B.2    Martienssen, R.A.3    Urano, T.4    Furukawa, K.5    Murakami, Y.6
  • 63
    • 72849124237 scopus 로고    scopus 로고
    • Intergenic transcription by RNA polymerase II coordinates Pol IV and Pol v in siRNA-directed transcriptional gene silencing in Arabidopsis
    • Zheng, B. et al. Intergenic transcription by RNA polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis. Genes Dev. 23, 2850-2860 (2009).
    • (2009) Genes Dev. , vol.23 , pp. 2850-2860
    • Zheng, B.1
  • 64
    • 77955482238 scopus 로고    scopus 로고
    • Paramutation in maize: RNA mediated trans-generational gene silencing
    • Arteaga-Vazquez, M. A. & Chandler, V. L. Paramutation in maize: RNA mediated trans-generational gene silencing. Curr. Opin. Genet. Dev. 20, 156-163 (2010).
    • (2010) Curr. Opin. Genet. Dev. , vol.20 , pp. 156-163
    • Arteaga-Vazquez, M.A.1    Chandler, V.L.2
  • 65
    • 78049386260 scopus 로고    scopus 로고
    • Paramutation and development
    • Hollick, J. B. Paramutation and development. Annu. Rev. Cell Dev. Biol. 26, 557-579 (2010).
    • (2010) Annu. Rev. Cell Dev. Biol. , vol.26 , pp. 557-579
    • Hollick, J.B.1
  • 66
    • 61349107326 scopus 로고    scopus 로고
    • RNA polymerase IV functions in paramutation in Zea mays
    • Erhard, K. F., Jr. et al. RNA polymerase IV functions in paramutation in Zea mays. Science 323, 1201-1205 (2009).
    • (2009) Science , vol.323 , pp. 1201-1205
    • Erhard Jr., K.F.1
  • 68
    • 70149109627 scopus 로고    scopus 로고
    • Production and processing of siRNA precursor transcripts from the highly repetitive maize genome
    • Hale, C. J., Erhard, K. F., Jr, Lisch, D. & Hollick, J. B. Production and processing of siRNA precursor transcripts from the highly repetitive maize genome. PLoS Genet. 5, e1000598 (2009).
    • (2009) PLoS Genet. , vol.5
    • Hale, C.J.1    Erhard Jr.K., F.2    Lisch, D.3    Hollick, J.B.4
  • 69
    • 73649130942 scopus 로고    scopus 로고
    • A dominant mutation in mediator of paramutation2, one of three second-largest subunits of a plant-specific RNA polymerase, disrupts multiple siRNA silencing processes
    • Sidorenko, L. et al. A dominant mutation in mediator of paramutation2, one of three second-largest subunits of a plant-specific RNA polymerase, disrupts multiple siRNA silencing processes. PLoS Genet. 5, e1000725 (2009).
    • (2009) PLoS Genet , vol.5
    • Sidorenko, L.1
  • 70
    • 73649111706 scopus 로고    scopus 로고
    • Diversity of Pol IV function is defined by mutations at the maize rmr7 locus
    • Stonaker, J. L., Lim, J. P., Erhard, K. F. Jr & Hollick, J. B. Diversity of Pol IV function is defined by mutations at the maize rmr7 locus. PLoS Genet. 5, e1000706 (2009).
    • (2009) PLoS Genet , vol.5
    • Stonaker, J.L.1    Lim, J.P.2    Erhard Jr., K.F.3    Hollick, J.B.4
  • 71
    • 79960729221 scopus 로고    scopus 로고
    • Silencing signals in plants: A long journey for small RNAs
    • Molnar, A., Melnyk, C. & Baulcombe, D. C. Silencing signals in plants: a long journey for small RNAs. Genome Biol. 12, 215 (2011).
    • (2011) Genome Biol , vol.12 , pp. 215
    • Molnar, A.1    Melnyk, C.2    Baulcombe, D.C.3
  • 72
    • 28444464041 scopus 로고    scopus 로고
    • DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal
    • DOI 10.1038/ng1675, PII N1675
    • Dunoyer, P., Himber, C. & Voinnet, O. DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal. Nature Genet. 37, 1356-1360 (2005). (Pubitemid 41722192)
    • (2005) Nature Genetics , vol.37 , Issue.12 , pp. 1356-1360
    • Dunoyer, P.1    Himber, C.2    Voinnet, O.3
  • 73
    • 34347342782 scopus 로고    scopus 로고
    • Intra- and intercellular RNA interference in Arabidopsis thaliana requires components of the microRNA and heterochromatic silencing pathways
    • DOI 10.1038/ng2081, PII NG2081
    • Dunoyer, P., Himber, C., Ruiz-Ferrer, V., Alioua, A. & Voinnet, O. Intra-and intercellular RNA interference in Arabidopsis thaliana requires components of the microRNA and heterochromatic silencing pathways. Nature Genet. 39, 848-856 (2007). (Pubitemid 47014501)
    • (2007) Nature Genetics , vol.39 , Issue.7 , pp. 848-856
    • Dunoyer, P.1    Himber, C.2    Ruiz-Ferrer, V.3    Alioua, A.4    Voinnet, O.5
  • 74
    • 77952379691 scopus 로고    scopus 로고
    • Small RNA duplexes function as mobile silencing signals between plant cells
    • Dunoyer, P. et al. Small RNA duplexes function as mobile silencing signals between plant cells. Science 328, 912-916 (2010).
    • (2010) Science , vol.328 , pp. 912-916
    • Dunoyer, P.1
  • 75
    • 77952584373 scopus 로고    scopus 로고
    • An endogenous, systemic RNAi pathway in plants
    • Dunoyer, P. et al. An endogenous, systemic RNAi pathway in plants. EMBO J. 29, 1699-1712 (2010).
    • (2010) EMBO J. , vol.29 , pp. 1699-1712
    • Dunoyer, P.1
  • 76
    • 77952403409 scopus 로고    scopus 로고
    • Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells
    • Molnar, A. et al. Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells. Science 328, 872-875 (2010).
    • (2010) Science , vol.328 , pp. 872-875
    • Molnar, A.1
  • 78
    • 68449100991 scopus 로고    scopus 로고
    • RNA polymerase v functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway
    • Pontes, O., Costa-Nunes, P., Vithayathil, P. & Pikaard, C. S. RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway. Mol. Plant 2, 700-710 (2009).
    • (2009) Mol. Plant , vol.2 , pp. 700-710
    • Pontes, O.1    Costa-Nunes, P.2    Vithayathil, P.3    Pikaard, C.S.4
  • 79
    • 73349109162 scopus 로고    scopus 로고
    • A Pol V-mediated silencing, independent of RNA-directed DNA methylation, applies to 5S rDNA
    • Douet, J., Tutois, S. & Tourmente, S. A Pol V-mediated silencing, independent of RNA-directed DNA methylation, applies to 5S rDNA. PLoS Genet. 5, e1000690 (2009).
    • (2009) PLoS Genet , vol.5
    • Douet, J.1    Tutois, S.2    Tourmente, S.3
  • 80
    • 77950420409 scopus 로고    scopus 로고
    • Seasonal and developmental timing of flowering
    • Amasino, R. Seasonal and developmental timing of flowering. Plant J. 61, 1001-1013 (2010).
    • (2010) Plant J. , vol.61 , pp. 1001-1013
    • Amasino, R.1
  • 82
    • 35648982312 scopus 로고    scopus 로고
    • The Arabidopsis RNA-Binding Protein FCA Requires a Lysine-Specific Demethylase 1 Homolog to Downregulate FLC
    • DOI 10.1016/j.molcel.2007.10.018, PII S1097276507007009
    • Liu, F. et al. The Arabidopsis RNA-binding protein FCA requires a lysine-specific demethylase 1 homolog to downregulate FLC. Mol. Cell 28, 398-407 (2007). (Pubitemid 350030571)
    • (2007) Molecular Cell , vol.28 , Issue.3 , pp. 398-407
    • Liu, F.1    Quesada, V.2    Crevillen, P.3    Baurle, I.4    Swiezewski, S.5    Dean, C.6
  • 83
    • 10044244768 scopus 로고    scopus 로고
    • siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis
    • DOI 10.1101/gad.1217304
    • Liu, J., He, Y., Amasino, R. & Chen, X. siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis. Genes Dev. 18, 2873-2878 (2004). (Pubitemid 39602306)
    • (2004) Genes and Development , vol.18 , Issue.23 , pp. 2873-2878
    • Liu, J.1    He, Y.2    Amasino, R.3    Chen, X.4
  • 85
    • 0033637356 scopus 로고    scopus 로고
    • The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene
    • Soppe, W. J. et al. The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene. Mol. Cell 6, 791-802 (2000).
    • (2000) Mol. Cell , vol.6 , pp. 791-802
    • Soppe, W.J.1
  • 86
    • 67650461957 scopus 로고    scopus 로고
    • Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis
    • Mosher, R. A. et al. Uniparental expression of PolIV-dependent siRNAs in developing endosperm of Arabidopsis. Nature 460, 283-286 (2009).
    • (2009) Nature , vol.460 , pp. 283-286
    • Mosher, R.A.1
  • 87
    • 59349118366 scopus 로고    scopus 로고
    • Epigenetic reprogramming and small RNA silencing of transposable elements in pollen
    • Slotkin, R. K. et al. Epigenetic reprogramming and small RNA silencing of transposable elements in pollen. Cell 136, 461-472 (2009).
    • (2009) Cell , vol.136 , pp. 461-472
    • Slotkin, R.K.1
  • 88
    • 24644448635 scopus 로고    scopus 로고
    • Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana
    • Wang, X. J., Gaasterland, T. & Chua, N. H. Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana. Genome Biol. 6, R30 (2005).
    • (2005) Genome Biol , vol.6
    • Wang, X.J.1    Gaasterland, T.2    Chua, N.H.3
  • 89
    • 29244490062 scopus 로고    scopus 로고
    • Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
    • DOI 10.1016/j.cell.2005.11.035, PII S0092867405013309
    • Borsani, O., Zhu, J., Verslues, P. E., Sunkar, R. & Zhu, J. K. Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell 123, 1279-1291 (2005). (Pubitemid 41821785)
    • (2005) Cell , vol.123 , Issue.7 , pp. 1279-1291
    • Borsani, O.1    Zhu, J.2    Verslues, P.E.3    Sunkar, R.4    Zhu, J.-K.5
  • 90
    • 36849089086 scopus 로고    scopus 로고
    • A novel class of bacteria-induced small RNAs in Arabidopsis
    • DOI 10.1101/gad.1595107
    • Katiyar-Agarwal, S., Gao, S., Vivian-Smith, A. & Jin, H. A novel class of bacteria-induced small RNAs in Arabidopsis. Genes Dev. 21, 3123-3134 (2007). (Pubitemid 350223529)
    • (2007) Genes and Development , vol.21 , Issue.23 , pp. 3123-3134
    • Katiyar-Agarwal, S.1    Gao, S.2    Vivian-Smith, A.3    Jin, H.4
  • 91
    • 77952415941 scopus 로고    scopus 로고
    • Proper regulation of a sperm-specific cis-nat-siRNA is essential for double fertilization in Arabidopsis
    • Ron, M., Alandete Saez, M., Eshed Williams, L., Fletcher, J. C. & McCormick, S. Proper regulation of a sperm-specific cis-nat-siRNA is essential for double fertilization in Arabidopsis. Genes Dev. 24, 1010-1021 (2010).
    • (2010) Genes Dev. , vol.24 , pp. 1010-1021
    • Ron, M.1    Alandete Saez, M.2    Eshed Williams, L.3    Fletcher, J.C.4    McCormick, S.5
  • 92
    • 58849120615 scopus 로고    scopus 로고
    • PolV(PolIVb) function in RNA-directed DNA methylation requires the conserved active site and an additional plant-specific subunit
    • Lahmy, S. et al. PolV(PolIVb) function in RNA-directed DNA methylation requires the conserved active site and an additional plant-specific subunit. Proc. Natl Acad. Sci. USA 106, 941-946 (2009).
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , pp. 941-946
    • Lahmy, S.1
  • 93
    • 33845887976 scopus 로고    scopus 로고
    • A multistep process gave rise to RNA polymerase IV of land plants
    • DOI 10.1007/s00239-006-0093-z
    • Luo, J. & Hall, B. D. A multistep process gave rise to RNA polymerase IV of land plants. J. Mol. Evol. 64, 101-112 (2007). (Pubitemid 46020863)
    • (2007) Journal of Molecular Evolution , vol.64 , Issue.1 , pp. 101-112
    • Luo, J.1    Hall, B.D.2
  • 94
    • 0033614429 scopus 로고    scopus 로고
    • Arabidopsis thaliana RNA polymerase II subunits related to yeast and human RPB5
    • DOI 10.1016/S0378-1119(99)00090-6, PII S0378111999000906
    • Larkin, R. M., Hagen, G. & Guilfoyle, T. J. Arabidopsis thaliana RNA polymerase II subunits related to yeast and human RPB5. Gene 231, 41-47 (1999). (Pubitemid 29307771)
    • (1999) Gene , vol.231 , Issue.1-2 , pp. 41-47
    • Larkin, R.M.1    Hagen, G.2    Guilfoyle, T.J.3
  • 95
    • 0030694715 scopus 로고    scopus 로고
    • Extensive purification of a putative RNA polymerase I holoenzyme from plants that accurately initiates rRNA gene transcription in vitro
    • DOI 10.1073/pnas.94.22.11869
    • Saez-Vasquez, J. & Pikaard, C. S. Extensive purification of a putative RNA polymerase I holoenzyme from plants that accurately initiates rRNA gene transcription in vitro. Proc. Natl Acad. Sci. USA 94, 11869-11874 (1997). (Pubitemid 27467809)
    • (1997) Proceedings of the National Academy of Sciences of the United States of America , vol.94 , Issue.22 , pp. 11869-11874
    • Saez-Vasouez, J.1    Pikaard, C.S.2
  • 96
    • 0035971082 scopus 로고    scopus 로고
    • Dissociable Rpb4-Rpb7 subassembly of RNA polymerase II binds to single-strand nucleic acid and mediates a post-recruitment step in transcription initiation
    • Orlicky, S. M., Tran, P. T., Sayre, M. H. & Edwards, A. M. Dissociable Rpb4-Rpb7 subassembly of RNA polymerase II binds to single-strand nucleic acid and mediates a post-recruitment step in transcription initiation. J. Biol. Chem. 276, 10097-10102 (2001).
    • (2001) J. Biol. Chem. , vol.276 , pp. 10097-10102
    • Orlicky, S.M.1    Tran, P.T.2    Sayre, M.H.3    Edwards, A.M.4
  • 97
    • 33845604554 scopus 로고    scopus 로고
    • Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways
    • DOI 10.1128/EC.00288-06
    • Selitrennik, M., Duek, L., Lotan, R. & Choder, M. Nucleocytoplasmic shuttling of the Rpb4p and Rpb7p subunits of Saccharomyces cerevisiae RNA polymerase II by two pathways. Eukaryot. Cell 5, 2092-2103 (2006). (Pubitemid 44956820)
    • (2006) Eukaryotic Cell , vol.5 , Issue.12 , pp. 2092-2103
    • Selitrennik, M.1    Duek, L.2    Lotan, R.3    Choder, M.4
  • 99
    • 34748850800 scopus 로고    scopus 로고
    • The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms
    • DOI 10.1083/jcb.200701165
    • Lotan, R., Goler-Baron, V., Duek, L., Haimovich, G. & Choder, M. The Rpb7p subunit of yeast RNA polymerase II plays roles in the two major cytoplasmic mRNA decay mechanisms. J. Cell Biol. 178, 1133-1143 (2007) (Pubitemid 47480222)
    • (2007) Journal of Cell Biology , vol.178 , Issue.7 , pp. 1133-1143
    • Lotan, R.1    Goler-Baron, V.2    Duek, L.3    Haimovich, G.4    Choder, M.5
  • 100
    • 48749090496 scopus 로고    scopus 로고
    • Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes
    • Goler-Baron, V. et al. Transcription in the nucleus and mRNA decay in the cytoplasm are coupled processes. Genes Dev. 22, 2022-2027 (2008).
    • (2008) Genes Dev. , vol.22 , pp. 2022-2027
    • Goler-Baron, V.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.