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Volumn 5, Issue 11, 2009, Pages

Diversity of Pol IV function is defined by mutations at the maize rmr7 locus

Author keywords

[No Author keywords available]

Indexed keywords

DNA DIRECTED RNA POLYMERASE; PROTEIN NRPD2A; RNA POLYMERASE 4; SMALL INTERFERING RNA; UNCLASSIFIED DRUG; DNA DIRECTED DNA POLYMERASE BETA; MESSENGER RNA; PLANT RNA; VEGETABLE PROTEIN;

EID: 73649111706     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1000706     Document Type: Article
Times cited : (61)

References (40)
  • 1
    • 33845887976 scopus 로고    scopus 로고
    • A multistep process gave rise to RNA polymerase IV of land plants
    • Luo J, Hall BD (2007) A multistep process gave rise to RNA polymerase IV of land plants. J Mol Evol 64 (1): 101-112.
    • (2007) J Mol Evol , vol.64 , Issue.1 , pp. 101-112
    • Luo, J.1    Hall, B.D.2
  • 2
    • 0034649566 scopus 로고    scopus 로고
    • Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
    • Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
  • 3
    • 14844295120 scopus 로고    scopus 로고
    • RNA polymerase IV directs silencing of endogenous DNA
    • Herr AJ, Jensen MB, Dalmay T, Baulcombe DC (2005) RNA polymerase IV directs silencing of endogenous DNA. Science 308: 118-120.
    • (2005) Science , vol.308 , pp. 118-120
    • Herr, A.J.1    Jensen, M.B.2    Dalmay, T.3    Baulcombe, D.C.4
  • 4
    • 22844447304 scopus 로고    scopus 로고
    • Atypical RNA polymerase subunits required for RNA-directed DNA methylation
    • Kanno T, Huettel B, Mette MF, Aufsatz W, Jaligot E, et al. (2005) Atypical RNA polymerase subunits required for RNA-directed DNA methylation. Nat Genet 37: 761-765.
    • (2005) Nat Genet , vol.37 , pp. 761-765
    • Kanno, T.1    Huettel, B.2    Mette, M.F.3    Aufsatz, W.4    Jaligot, E.5
  • 7
    • 34249809690 scopus 로고    scopus 로고
    • RNA-directed DA methylation mediated by DRD1 and Pol IVb: A versatile pathway for transcriptional gene silencing in plants
    • Huettel B, Kanno T, Daxinger L, Bucher E, Winden JV, et al. (2007) RNA-directed DA methylation mediated by DRD1 and Pol IVb: A versatile pathway for transcriptional gene silencing in plants. Biochem Biophy Acta 1769: 358-374.
    • (2007) Biochem Biophy Acta , vol.1769 , pp. 358-374
    • Huettel, B.1    Kanno, T.2    Daxinger, L.3    Bucher, E.4    Winden, J.V.5
  • 8
    • 55449131096 scopus 로고    scopus 로고
    • Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes
    • Weirzbicki AT, Haag JR, Pikaard CS (2008) Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes. Cell 135: 635-648.
    • (2008) Cell , vol.135 , pp. 635-648
    • Weirzbicki, A.T.1    Haag, J.R.2    Pikaard, C.S.3
  • 10
    • 31544440125 scopus 로고    scopus 로고
    • Rmr6 maintains meiotic inheritance of paramutant states in Zea mays
    • Hollick JB, Kermicle JL, Parkinson SE (2005) Rmr6 maintains meiotic inheritance of paramutant states in Zea mays. Genetics 171: 725-740.
    • (2005) Genetics , vol.171 , pp. 725-740
    • Hollick, J.B.1    Kermicle, J.L.2    Parkinson, S.E.3
  • 11
    • 35648945855 scopus 로고    scopus 로고
    • A novel Snf2 protein maintains trans-generational regulatory states established by paramutation in maize
    • doi:10.1371/journal.pbio.0050275
    • Hale CJ, Stonaker JL, Gross SM, Hollick JB (2007) A novel Snf2 protein maintains trans-generational regulatory states established by paramutation in maize. PLoS Biol 5(10): e275. doi:10.1371/journal.pbio.0050275.
    • (2007) PLoS Biol , vol.5 , Issue.10
    • Hale, C.J.1    Stonaker, J.L.2    Gross, S.M.3    Hollick, J.B.4
  • 12
    • 33746363573 scopus 로고    scopus 로고
    • An RNA-dependent RNA polymerase is required for paramutation in maize
    • Alleman M, Sidorenko L, McGinnis K, Seshadri V, Dorweiler JE, et al. (2006) An RNA-dependent RNA polymerase is required for paramutation in maize. Nature 442: 295-298.
    • (2006) Nature , vol.442 , pp. 295-298
    • Alleman, M.1    Sidorenko, L.2    McGinnis, K.3    Seshadri, V.4    Dorweiler, J.E.5
  • 13
    • 0029119776 scopus 로고
    • Allelic interactions heritably alter the activity of a metastable maize pl allele
    • Hollick JB, Patterson GI, Coe EH Jr, Cone KC, Chandler VL (1995) Allelic interactions heritably alter the activity of a metastable maize pl allele. Genetics 141: 709-719.
    • (1995) Genetics , vol.141 , pp. 709-719
    • Hollick, J.B.1    Patterson, G.I.2    Coe Jr, E.H.3    Cone, K.C.4    Chandler, V.L.5
  • 14
    • 0027490840 scopus 로고
    • Paramutation, an allelic interaction, is associated with a stable and heritable reduction of transcription of the maize b regulatory gene
    • Patterson GI, Thorpe CJ, Chandler VL (1993) Paramutation, an allelic interaction, is associated with a stable and heritable reduction of transcription of the maize b regulatory gene. Genetics 135: 881-894.
    • (1993) Genetics , vol.135 , pp. 881-894
    • Patterson, G.I.1    Thorpe, C.J.2    Chandler, V.L.3
  • 15
    • 0015871312 scopus 로고
    • Paramutation
    • Brink A (1973) Paramutation. Annu Rev Genet 7: 129-152.
    • (1973) Annu Rev Genet , vol.7 , pp. 129-152
    • Brink, A.1
  • 16
    • 0034353111 scopus 로고    scopus 로고
    • mediator of paramutation1 (mop1) is required for the establishment and maintenance of paramutation at multiple maize loci
    • Dorweiler JE, Carey CC, Kubo KM, Hollick JB, Kermicle JL, et al. (2000) mediator of paramutation1 (mop1) is required for the establishment and maintenance of paramutation at multiple maize loci. Plant Cell 12: 2101-2118.
    • (2000) Plant Cell , vol.12 , pp. 2101-2118
    • Dorweiler, J.E.1    Carey, C.C.2    Kubo, K.M.3    Hollick, J.B.4    Kermicle, J.L.5
  • 17
    • 0035154874 scopus 로고    scopus 로고
    • Genetic factors required to maintain repression of a paramutagenic maize pl1 allele
    • Hollick JB, Chandler VL (2001) Genetic factors required to maintain repression of a paramutagenic maize pl1 allele. Genetics 157: 369-378.
    • (2001) Genetics , vol.157 , pp. 369-378
    • Hollick, J.B.1    Chandler, V.L.2
  • 18
    • 33847031363 scopus 로고    scopus 로고
    • Paramutation: From maize to mice
    • Chandler VL (2007) Paramutation: from maize to mice. Cell 128: 641-645.
    • (2007) Cell , vol.128 , pp. 641-645
    • Chandler, V.L.1
  • 19
    • 54449085115 scopus 로고    scopus 로고
    • Distinct size distribution of endogenous siRNAs in maize: Evidence from the deep sequencing in the mop1-1 mutant
    • Nobuta K, Lu C, Shrivastava R, Pillay M, De Paoli E, et al. (2008) Distinct size distribution of endogenous siRNAs in maize: Evidence from the deep sequencing in the mop1-1 mutant. Proc Natl Acad Sci 105 (39): 14958-14963.
    • (2008) Proc Natl Acad Sci , vol.105 , Issue.39 , pp. 14958-14963
    • Nobuta, K.1    Lu, C.2    Shrivastava, R.3    Pillay, M.4    De Paoli, E.5
  • 20
    • 0017844274 scopus 로고
    • B-A translocations in maize. I. Use in locating genes to chromosome arms
    • Beckett JB (1978) B-A translocations in maize. I. Use in locating genes to chromosome arms. J Hered 69: 27-36.
    • (1978) J Hered , vol.69 , pp. 27-36
    • Beckett, J.B.1
  • 21
    • 85013524357 scopus 로고    scopus 로고
    • Beckett JB (1991) Cytogenetic, genetic and plant breeding applications of B-A translocations in maize. In Chromosome Engineering in Plants: Genetics, Breeding, Evolution, 2A, Gupta PK, Tsuchiya T (eds), Elsevier, Amsterdam. pp 493-529.
    • Beckett JB (1991) Cytogenetic, genetic and plant breeding applications of B-A translocations in maize. In Chromosome Engineering in Plants: Genetics, Breeding, Evolution, Vol 2A, Gupta PK, Tsuchiya T (eds), Elsevier, Amsterdam. pp 493-529.
  • 22
    • 33750244877 scopus 로고    scopus 로고
    • Initiation, establishment, and maintenance of heritable MuDR transposon silencing in maize are mediated by distinct factors
    • doi:10.1371/journal.pbio.0040339
    • Woodhouse MR, Freeling M, Lisch D (2006) Initiation, establishment, and maintenance of heritable MuDR transposon silencing in maize are mediated by distinct factors. PLoS Biol 4: e339. doi:10.1371/journal.pbio.0040339.
    • (2006) PLoS Biol , vol.4
    • Woodhouse, M.R.1    Freeling, M.2    Lisch, D.3
  • 23
    • 0035827346 scopus 로고    scopus 로고
    • Structural basis of transcription: RNA Polymerase II at 2.8 Angstrom resolution
    • Cramer P, Bushnell DA, Kornberg RD (2001) Structural basis of transcription: RNA Polymerase II at 2.8 Angstrom resolution. Science 292: 1863-1876.
    • (2001) Science , vol.292 , pp. 1863-1876
    • Cramer, P.1    Bushnell, D.A.2    Kornberg, R.D.3
  • 24
    • 58149469958 scopus 로고    scopus 로고
    • Metal A and metal B sites of nuclear RNA polymerases Pol IV and Pol V are required for siRNA-dependent DNA methylation and gene silencing
    • doi:10.1371/journal.pone. 0004110
    • Haag JR, Pontes O, Pikaard CS (2009) Metal A and metal B sites of nuclear RNA polymerases Pol IV and Pol V are required for siRNA-dependent DNA methylation and gene silencing. PLoS ONE 4(1): e4110. doi:10.1371/journal.pone. 0004110.
    • (2009) PLoS ONE , vol.4 , Issue.1
    • Haag, J.R.1    Pontes, O.2    Pikaard, C.S.3
  • 25
    • 14744275063 scopus 로고    scopus 로고
    • Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum
    • Swigonová Z, Bennetzen JL, Messing J (2005) Structure and evolution of the r/b chromosomal regions in rice, maize and sorghum. Genetics 169: 891-906.
    • (2005) Genetics , vol.169 , pp. 891-906
    • Swigonová, Z.1    Bennetzen, J.L.2    Messing, J.3
  • 26
    • 70149109627 scopus 로고    scopus 로고
    • Production and processing of siRNA precursor transcripts from the highly repetitive maize genome
    • doi:10.1371/journal.pgen.1000598
    • Hale CJ, Erhard KF Jr, Lisch D, Hollick JB (2009) Production and processing of siRNA precursor transcripts from the highly repetitive maize genome. PLoS Genet 5(8): e100598. doi:10.1371/journal.pgen.1000598.
    • (2009) PLoS Genet , vol.5 , Issue.8
    • Hale, C.J.1    Erhard Jr, K.F.2    Lisch, D.3    Hollick, J.B.4
  • 27
    • 0031660782 scopus 로고    scopus 로고
    • Epigenetic allelic states of a maize transcriptional regulatory locus exhibit overdominant gene action
    • Hollick JB, Chandler VL (1998) Epigenetic allelic states of a maize transcriptional regulatory locus exhibit overdominant gene action. Genetics 150: 891-897.
    • (1998) Genetics , vol.150 , pp. 891-897
    • Hollick, J.B.1    Chandler, V.L.2
  • 28
    • 34250723437 scopus 로고    scopus 로고
    • Multiple trans-sensing interactions affect meiotically heritable epigenetic states at the maize pl1 locus
    • Gross SM, Hollick JB (2007) Multiple trans-sensing interactions affect meiotically heritable epigenetic states at the maize pl1 locus. Genetics 176: 829-839.
    • (2007) Genetics , vol.176 , pp. 829-839
    • Gross, S.M.1    Hollick, J.B.2
  • 29
    • 34547660559 scopus 로고    scopus 로고
    • Maize sex determination and abaxial leaf fates are canalized by a factor that maintains repressed epigenetic states
    • Parkinson SE, Gross SM, Hollick JB (2007) Maize sex determination and abaxial leaf fates are canalized by a factor that maintains repressed epigenetic states. Dev Biol 308: 462-473.
    • (2007) Dev Biol , vol.308 , pp. 462-473
    • Parkinson, S.E.1    Gross, S.M.2    Hollick, J.B.3
  • 30
    • 58649104893 scopus 로고    scopus 로고
    • Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA Polymerase II
    • Ream TS, Haag JR, Wierzbicki AT, Nicora CD, Norbeck A, et al. (2009) Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA Polymerase II. Mol Cell 33: 192-203.
    • (2009) Mol Cell , vol.33 , pp. 192-203
    • Ream, T.S.1    Haag, J.R.2    Wierzbicki, A.T.3    Nicora, C.D.4    Norbeck, A.5
  • 32
    • 14844302397 scopus 로고    scopus 로고
    • Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation
    • Onodera Y, Haag JR, Ream T, Costa Nunes P, Pontes O, et al. (2005) Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120: 613-622.
    • (2005) Cell , vol.120 , pp. 613-622
    • Onodera, Y.1    Haag, J.R.2    Ream, T.3    Costa Nunes, P.4    Pontes, O.5
  • 33
    • 24344433177 scopus 로고    scopus 로고
    • Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis
    • Pontier D, Yahubyan G, Vega D, Bulski A, Saez-Vasquez J, et al. (2005) Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis. Genes Dev 19: 2030-2040.
    • (2005) Genes Dev , vol.19 , pp. 2030-2040
    • Pontier, D.1    Yahubyan, G.2    Vega, D.3    Bulski, A.4    Saez-Vasquez, J.5
  • 34
    • 3042836334 scopus 로고    scopus 로고
    • Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics
    • Paterson A, Bowers J, Chapman B (2004) Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics. Proc Natl Acad Sci USA 101: 9903-9908.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9903-9908
    • Paterson, A.1    Bowers, J.2    Chapman, B.3
  • 36
    • 0030959648 scopus 로고    scopus 로고
    • DNA sequence evidence for the segmental allotetraploid origin of maize
    • Gaut B, Doebley J (1997) DNA sequence evidence for the segmental allotetraploid origin of maize. Proc Natl Acad Sci USA 94: 6809-6814.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 6809-6814
    • Gaut, B.1    Doebley, J.2
  • 37
  • 38
    • 59249102090 scopus 로고    scopus 로고
    • Paleopolyploidy and its impact on the structure and function of modern plant genomes
    • Paterson A (2008) Paleopolyploidy and its impact on the structure and function of modern plant genomes. Genome dynamics 4: 1-12.
    • (2008) Genome dynamics , vol.4 , pp. 1-12
    • Paterson, A.1
  • 40
    • 0242286589 scopus 로고    scopus 로고
    • Distribution of retroelements in centromeres and neocentromeres of maize
    • Mroczek RJ, Dawe RK (2003) Distribution of retroelements in centromeres and neocentromeres of maize. Genetics 165: 809-819.
    • (2003) Genetics , vol.165 , pp. 809-819
    • Mroczek, R.J.1    Dawe, R.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.