-
1
-
-
17444430392
-
MicroRNA-directed phasing during trans-acting siRNA biogenesis in plants
-
E. Allen, Z. Xie, A.M. Gustafson, and J.C. Carrington microRNA-directed phasing during trans-acting siRNA biogenesis in plants Cell 121 2005 207 221
-
(2005)
Cell
, vol.121
, pp. 207-221
-
-
Allen, E.1
Xie, Z.2
Gustafson, A.M.3
Carrington, J.C.4
-
2
-
-
0242361521
-
Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes
-
M.J. Aukerman, and H. Sakai Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes Plant Cell 15 2003 2730 2741
-
(2003)
Plant Cell
, vol.15
, pp. 2730-2741
-
-
Aukerman, M.J.1
Sakai, H.2
-
3
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
D.P. Bartel MicroRNAs: genomics, biogenesis, mechanism, and function Cell 116 2004 281 297
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
4
-
-
4644242349
-
RNA silencing in plants
-
D. Baulcombe RNA silencing in plants Nature 431 2004 356 363
-
(2004)
Nature
, vol.431
, pp. 356-363
-
-
Baulcombe, D.1
-
5
-
-
0032472373
-
AGO1 defines a novel locus of Arabidopsis controlling leaf development
-
K. Bohmert, I. Camus, C. Bellini, D. Bouchez, M. Caboche, and C. Benning AGO1 defines a novel locus of Arabidopsis controlling leaf development EMBO J. 17 1998 170 180
-
(1998)
EMBO J.
, vol.17
, pp. 170-180
-
-
Bohmert, K.1
Camus, I.2
Bellini, C.3
Bouchez, D.4
Caboche, M.5
Benning, C.6
-
6
-
-
1642366133
-
A microRNA as a translational repressor of APETALA2 in arabidopsis flower development
-
X. Chen A microRNA as a translational repressor of APETALA2 in arabidopsis flower development Science 303 2004 2022 2025
-
(2004)
Science
, vol.303
, pp. 2022-2025
-
-
Chen, X.1
-
7
-
-
0034633770
-
AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals
-
M. Fagard, S. Boutet, J.B. Morel, C. Bellini, and H. Vaucheret AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals Proc. Natl. Acad. Sci. USA 97 2000 11650 11654
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 11650-11654
-
-
Fagard, M.1
Boutet, S.2
Morel, J.B.3
Bellini, C.4
Vaucheret, H.5
-
8
-
-
0036801731
-
SHORT INTEGUMENTS1/SUSPENSOR1/CARPEL FACTORY, a Dicer homolog, is a maternal effect gene required for embryo development in Arabidopsis
-
T.A. Golden, S.E. Schauer, J.D. Lang, S. Pien, A.R. Mushegian, U. Grossniklaus, D.W. Meinke, and A. Ray SHORT INTEGUMENTS1/SUSPENSOR1/CARPEL FACTORY, a Dicer homolog, is a maternal effect gene required for embryo development in Arabidopsis Plant Physiol. 130 2002 808 822
-
(2002)
Plant Physiol.
, vol.130
, pp. 808-822
-
-
Golden, T.A.1
Schauer, S.E.2
Lang, J.D.3
Pien, S.4
Mushegian, A.R.5
Grossniklaus, U.6
Meinke, D.W.7
Ray, A.8
-
9
-
-
17844364875
-
Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing
-
A. Grishok, A.E. Pasquinelli, D. Conte, N. Li, S. Parrish, I. Ha, D.L. Baillie, A. Fire, G. Ruvkun, and C.C. Mello Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing Cell 106 2001 23 34
-
(2001)
Cell
, vol.106
, pp. 23-34
-
-
Grishok, A.1
Pasquinelli, A.E.2
Conte, D.3
Li, N.4
Parrish, S.5
Ha, I.6
Baillie, D.L.7
Fire, A.8
Ruvkun, G.9
Mello, C.C.10
-
10
-
-
3042602447
-
Kinetic analysis of the RNAi enzyme complex
-
B. Haley, and P.D. Zamore Kinetic analysis of the RNAi enzyme complex Nat. Struct. Mol. Biol. 11 2004 599 606
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 599-606
-
-
Haley, B.1
Zamore, P.D.2
-
11
-
-
0035839109
-
Argonaute2, a link between genetic and biochemical analyses of RNAi
-
S.M. Hammond, S. Boettcher, A.A. Caudy, R. Kobayashi, and G.J. Hannon Argonaute2, a link between genetic and biochemical analyses of RNAi Science 293 2001 1146 1150
-
(2001)
Science
, vol.293
, pp. 1146-1150
-
-
Hammond, S.M.1
Boettcher, S.2
Caudy, A.A.3
Kobayashi, R.4
Hannon, G.J.5
-
12
-
-
0742323351
-
The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation
-
M.H. Han, S. Goud, L. Song, and N. Fedoroff The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation Proc. Natl. Acad. Sci. USA 101 2004 1093 1098
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 1093-1098
-
-
Han, M.H.1
Goud, S.2
Song, L.3
Fedoroff, N.4
-
13
-
-
0037062951
-
RNA interference
-
G.J. Hannon RNA interference Nature 418 2002 244 251
-
(2002)
Nature
, vol.418
, pp. 244-251
-
-
Hannon, G.J.1
-
14
-
-
20244378840
-
Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana
-
A. Hiraguri, R. Itoh, N. Kondo, Y. Nomura, D. Aizawa, Y. Murai, H. Koiwa, M. Seki, K. Shinozaki, and T. Fukuhara Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana Plant Mol. Biol. 57 2005 173 188
-
(2005)
Plant Mol. Biol.
, vol.57
, pp. 173-188
-
-
Hiraguri, A.1
Itoh, R.2
Kondo, N.3
Nomura, Y.4
Aizawa, D.5
Murai, Y.6
Koiwa, H.7
Seki, M.8
Shinozaki, K.9
Fukuhara, T.10
-
15
-
-
0141726771
-
The Arabidopsis heterochronic gene ZIPPY is an ARGONAUTE family member
-
C. Hunter, H. Sun, and R.S. Poethig The Arabidopsis heterochronic gene ZIPPY is an ARGONAUTE family member Curr. Biol. 13 2003 1734 1739
-
(2003)
Curr. Biol.
, vol.13
, pp. 1734-1739
-
-
Hunter, C.1
Sun, H.2
Poethig, R.S.3
-
16
-
-
1842816517
-
Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways
-
Y.S. Lee, K. Nakahara, J.W. Pham, K. Kim, Z. He, E.J. Sontheimer, and R.W. Carthew Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways Cell 117 2004 69 81
-
(2004)
Cell
, vol.117
, pp. 69-81
-
-
Lee, Y.S.1
Nakahara, K.2
Pham, J.W.3
Kim, K.4
He, Z.5
Sontheimer, E.J.6
Carthew, R.W.7
-
17
-
-
4644312235
-
The role of RNA interference in heterochromatic silencing
-
Z. Lippman, and R. Martienssen The role of RNA interference in heterochromatic silencing Nature 431 2004 364 370
-
(2004)
Nature
, vol.431
, pp. 364-370
-
-
Lippman, Z.1
Martienssen, R.2
-
18
-
-
4444368187
-
Argonaute2 is the catalytic engine of mammalian RNAi
-
J. Liu, M.A. Carmell, F.V. Rivas, C.G. Marsden, J.M. Thomson, J.J. Song, S.M. Hammond, L. Joshua-Tor, and G.J. Hannon Argonaute2 is the catalytic engine of mammalian RNAi Science 305 2004 1437 1441
-
(2004)
Science
, vol.305
, pp. 1437-1441
-
-
Liu, J.1
Carmell, M.A.2
Rivas, F.V.3
Marsden, C.G.4
Thomson, J.M.5
Song, J.J.6
Hammond, S.M.7
Joshua-Tor, L.8
Hannon, G.J.9
-
19
-
-
0141868916
-
R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway
-
Q. Liu, T.A. Rand, S. Kalidas, F. Du, H.E. Kim, D.P. Smith, and X. Wang R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway Science 301 2003 1921 1925
-
(2003)
Science
, vol.301
, pp. 1921-1925
-
-
Liu, Q.1
Rand, T.A.2
Kalidas, S.3
Du, F.4
Kim, H.E.5
Smith, D.P.6
Wang, X.7
-
20
-
-
0033027913
-
The PINHEAD/ZWILLE gene acts pleiotropically in Arabidopsis development and has overlapping functions with the ARGONAUTE1 gene
-
K. Lynn, A. Fernandez, M. Aida, J. Sedbrook, M. Tasaka, P. Masson, and M.K. Barton The PINHEAD/ZWILLE gene acts pleiotropically in Arabidopsis development and has overlapping functions with the ARGONAUTE1 gene Development 126 1999 469 481
-
(1999)
Development
, vol.126
, pp. 469-481
-
-
Lynn, K.1
Fernandez, A.2
Aida, M.3
Sedbrook, J.4
Tasaka, M.5
Masson, P.6
Barton, M.K.7
-
21
-
-
2442495329
-
RISC is a 5′ phosphomonoester-producing RNA endonuclease
-
J. Martinez, and T. Tuschl RISC is a 5′ phosphomonoester-producing RNA endonuclease Genes Dev. 18 2004 975 980
-
(2004)
Genes Dev.
, vol.18
, pp. 975-980
-
-
Martinez, J.1
Tuschl, T.2
-
22
-
-
3242736704
-
Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs
-
G. Meister, M. Landthaler, A. Patkaniowska, Y. Dorsett, G. Teng, and T. Tuschl Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs Mol. Cell 15 2004 185 197
-
(2004)
Mol. Cell
, vol.15
, pp. 185-197
-
-
Meister, G.1
Landthaler, M.2
Patkaniowska, A.3
Dorsett, Y.4
Teng, G.5
Tuschl, T.6
-
23
-
-
4644223259
-
Mechanisms of gene silencing by double-stranded RNA
-
G. Meister, and T. Tuschl Mechanisms of gene silencing by double-stranded RNA Nature 431 2004 343 349
-
(2004)
Nature
, vol.431
, pp. 343-349
-
-
Meister, G.1
Tuschl, T.2
-
24
-
-
0036009918
-
Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance
-
J.B. Morel, C. Godon, P. Mourrain, C. Beclin, S. Boutet, F. Feuerbach, F. Proux, and H. Vaucheret Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance Plant Cell 14 2002 629 639
-
(2002)
Plant Cell
, vol.14
, pp. 629-639
-
-
Morel, J.B.1
Godon, C.2
Mourrain, P.3
Beclin, C.4
Boutet, S.5
Feuerbach, F.6
Proux, F.7
Vaucheret, H.8
-
25
-
-
0032536782
-
Role of the ZWILLE gene in the regulation of central shoot meristem cell fate during Arabidopsis embryogenesis
-
B. Moussian, H. Schoof, A. Haecker, G. Jurgens, and T. Laux Role of the ZWILLE gene in the regulation of central shoot meristem cell fate during Arabidopsis embryogenesis EMBO J. 17 1998 1799 1809
-
(1998)
EMBO J.
, vol.17
, pp. 1799-1809
-
-
Moussian, B.1
Schoof, H.2
Haecker, A.3
Jurgens, G.4
Laux, T.5
-
26
-
-
3142729150
-
Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways
-
K. Okamura, A. Ishizuka, H. Siomi, and M.C. Siomi Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways Genes Dev. 18 2004 1655 1666
-
(2004)
Genes Dev.
, vol.18
, pp. 1655-1666
-
-
Okamura, K.1
Ishizuka, A.2
Siomi, H.3
Siomi, M.C.4
-
27
-
-
0037015239
-
CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana
-
W. Park, J. Li, R. Song, J. Messing, and X. Chen CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana Curr. Biol. 12 2002 1484 1495
-
(2002)
Curr. Biol.
, vol.12
, pp. 1484-1495
-
-
Park, W.1
Li, J.2
Song, R.3
Messing, J.4
Chen, X.5
-
28
-
-
4644286235
-
SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
-
A. Peragine, M. Yoshikawa, G. Wu, H.L. Albrecht, and R.S. Poethig SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis Genes Dev. 18 2004 2368 2379
-
(2004)
Genes Dev.
, vol.18
, pp. 2368-2379
-
-
Peragine, A.1
Yoshikawa, M.2
Wu, G.3
Albrecht, H.L.4
Poethig, R.S.5
-
29
-
-
1842766252
-
A dicer-2-dependent 80S complex cleaves targeted mRNAs during RNAi in Drosophila
-
J.W. Pham, J.L. Pellino, Y.S. Lee, R.W. Carthew, and E.J. Sontheimer A dicer-2-dependent 80S complex cleaves targeted mRNAs during RNAi in Drosophila Cell 117 2004 83 94
-
(2004)
Cell
, vol.117
, pp. 83-94
-
-
Pham, J.W.1
Pellino, J.L.2
Lee, Y.S.3
Carthew, R.W.4
Sontheimer, E.J.5
-
30
-
-
18744407284
-
Purified Argonaute2 and an siRNA form recombinant human RISC
-
F.V. Rivas, N.H. Tolia, J.J. Song, J.P. Aragon, J. Liu, G.J. Hannon, and L. Joshua-Tor Purified Argonaute2 and an siRNA form recombinant human RISC Nat. Struct. Mol. Biol. 12 2005 340 349
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 340-349
-
-
Rivas, F.V.1
Tolia, N.H.2
Song, J.J.3
Aragon, J.P.4
Liu, J.5
Hannon, G.J.6
Joshua-Tor, L.7
-
32
-
-
2342626647
-
The RNA-induced silencing complex is a Mg2+-dependent endonuclease
-
D.S. Schwarz, Y. Tomari, and P.D. Zamore The RNA-induced silencing complex is a Mg2+-dependent endonuclease Curr. Biol. 14 2004 787 791
-
(2004)
Curr. Biol.
, vol.14
, pp. 787-791
-
-
Schwarz, D.S.1
Tomari, Y.2
Zamore, P.D.3
-
33
-
-
0345490960
-
The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes
-
J.J. Song, J. Liu, N.H. Tolia, J. Schneiderman, S.K. Smith, R.A. Martienssen, G.J. Hannon, and L. Joshua-Tor The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes Nat. Struct. Biol. 10 2003 1026 1032
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 1026-1032
-
-
Song, J.J.1
Liu, J.2
Tolia, N.H.3
Schneiderman, J.4
Smith, S.K.5
Martienssen, R.A.6
Hannon, G.J.7
Joshua-Tor, L.8
-
34
-
-
4444302947
-
Crystal structure of Argonaute and its implications for RISC slicer activity
-
J.J. Song, S.K. Smith, G.J. Hannon, and L. Joshua-Tor Crystal structure of Argonaute and its implications for RISC slicer activity Science 305 2004 1434 1437
-
(2004)
Science
, vol.305
, pp. 1434-1437
-
-
Song, J.J.1
Smith, S.K.2
Hannon, G.J.3
Joshua-Tor, L.4
-
35
-
-
0032717319
-
The rde-1 gene, RNA interference, and transposon silencing in C. elegans
-
H. Tabara, M. Sarkissian, W.G. Kelly, J. Fleenor, A. Grishok, L. Timmons, A. Fire, and C.C. Mello The rde-1 gene, RNA interference, and transposon silencing in C. elegans Cell 99 1999 123 132
-
(1999)
Cell
, vol.99
, pp. 123-132
-
-
Tabara, H.1
Sarkissian, M.2
Kelly, W.G.3
Fleenor, J.4
Grishok, A.5
Timmons, L.6
Fire, A.7
Mello, C.C.8
-
36
-
-
0037188904
-
The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans
-
H. Tabara, E. Yigit, H. Siomi, and C.C. Mello The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans Cell 109 2002 861 871
-
(2002)
Cell
, vol.109
, pp. 861-871
-
-
Tabara, H.1
Yigit, E.2
Siomi, H.3
Mello, C.C.4
-
38
-
-
8844271740
-
A protein sensor for siRNA asymmetry
-
Y. Tomari, C. Matranga, B. Haley, N. Martinez, and P.D. Zamore A protein sensor for siRNA asymmetry Science 306 2004 1377 1380
-
(2004)
Science
, vol.306
, pp. 1377-1380
-
-
Tomari, Y.1
Matranga, C.2
Haley, B.3
Martinez, N.4
Zamore, P.D.5
-
39
-
-
2442650370
-
The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development
-
H. Vaucheret, F. Vazquez, P. Crete, and D.P. Bartel The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development Genes Dev. 18 2004 1187 1197
-
(2004)
Genes Dev.
, vol.18
, pp. 1187-1197
-
-
Vaucheret, H.1
Vazquez, F.2
Crete, P.3
Bartel, D.P.4
-
40
-
-
1542350745
-
The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing
-
F. Vazquez, V. Gasciolli, P. Crete, and H. Vaucheret The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing Curr. Biol. 14 2004 346 351
-
(2004)
Curr. Biol.
, vol.14
, pp. 346-351
-
-
Vazquez, F.1
Gasciolli, V.2
Crete, P.3
Vaucheret, H.4
-
41
-
-
4944225347
-
Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs
-
F. Vazquez, H. Vaucheret, R. Rajagopalan, C. Lepers, V. Gasciolli, A.C. Mallory, J.L. Hilbert, D.P. Bartel, and P. Crete Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs Mol. Cell 16 2004 69 79
-
(2004)
Mol. Cell
, vol.16
, pp. 69-79
-
-
Vazquez, F.1
Vaucheret, H.2
Rajagopalan, R.3
Lepers, C.4
Gasciolli, V.5
Mallory, A.C.6
Hilbert, J.L.7
Bartel, D.P.8
Crete, P.9
-
42
-
-
19344374219
-
Genetic and functional diversification of small RNA pathways in plants
-
10.1371/journal.pbio.0020104
-
Z. Xie, L.K. Johansen, A.M. Gustafson, K.D. Kasschau, A.D. Lellis, D. Zilberman, S.E. Jacobsen, and J.C. Carrington Genetic and functional diversification of small RNA pathways in plants PLoS Biol. 2 2004 e104 10.1371/journal.pbio.0020104
-
(2004)
PLoS Biol.
, vol.2
, pp. 104
-
-
Xie, Z.1
Johansen, L.K.2
Gustafson, A.M.3
Kasschau, K.D.4
Lellis, A.D.5
Zilberman, D.6
Jacobsen, S.E.7
Carrington, J.C.8
-
43
-
-
13644256193
-
Methylation as a crucial step in plant microRNA biogenesis
-
B. Yu, Z. Yang, J. Li, S. Minakhina, M. Yang, R.W. Padgett, R. Steward, and X. Chen Methylation as a crucial step in plant microRNA biogenesis Science 307 2005 932 935
-
(2005)
Science
, vol.307
, pp. 932-935
-
-
Yu, B.1
Yang, Z.2
Li, J.3
Minakhina, S.4
Yang, M.5
Padgett, R.W.6
Steward, R.7
Chen, X.8
-
44
-
-
3142613181
-
Single processing center models for human Dicer and bacterial RNase III
-
H. Zhang, F.A. Kolb, L. Jaskiewicz, E. Westhof, and W. Filipowicz Single processing center models for human Dicer and bacterial RNase III Cell 118 2004 57 68
-
(2004)
Cell
, vol.118
, pp. 57-68
-
-
Zhang, H.1
Kolb, F.A.2
Jaskiewicz, L.3
Westhof, E.4
Filipowicz, W.5
-
45
-
-
0037474126
-
ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation
-
D. Zilberman, X. Cao, and S.E. Jacobsen ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation Science 299 2003 716 719
-
(2003)
Science
, vol.299
, pp. 716-719
-
-
Zilberman, D.1
Cao, X.2
Jacobsen, S.E.3
-
46
-
-
3142640878
-
Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats
-
D. Zilberman, X. Cao, L.K. Johansen, Z. Xie, J.C. Carrington, and S.E. Jacobsen Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats Curr. Biol. 14 2004 1214 1220
-
(2004)
Curr. Biol.
, vol.14
, pp. 1214-1220
-
-
Zilberman, D.1
Cao, X.2
Johansen, L.K.3
Xie, Z.4
Carrington, J.C.5
Jacobsen, S.E.6
|