-
1
-
-
0031848226
-
Proteome and proteomics: New technologies, new concepts, and new words
-
Anderson NL, Anderson NG. Proteome and proteomics: new technologies, new concepts, and new words. Electrophoresis 19(11), 1853-1861 (1998). (Pubitemid 28392230)
-
(1998)
Electrophoresis
, vol.19
, Issue.11
, pp. 1853-1861
-
-
Anderson, N.L.1
Anderson, N.G.2
-
2
-
-
72449173774
-
Current trends in quantitative proteomics
-
Elliott MH, Smith DS, Parker CE, Borchers C. Current trends in quantitative proteomics. J. Mass Spectrom. 44(12), 1637-1660 (2009).
-
(2009)
J. Mass Spectrom.
, vol.44
, Issue.12
, pp. 1637-1660
-
-
Elliott, M.H.1
Smith, D.S.2
Parker, C.E.3
Borchers, C.4
-
3
-
-
33745539414
-
Protein turnover on the scale of the proteome
-
DOI 10.1586/14789450.3.1.97
-
Doherty MK, Beynon RJ. Protein turnover on the scale of the proteome. Expert Rev. Proteomics 3(1), 97-110 (2006). (Pubitemid 43979395)
-
(2006)
Expert Review of Proteomics
, vol.3
, Issue.1
, pp. 97-110
-
-
Doherty, M.K.1
Beynon, R.J.2
-
4
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
-
DOI 10.1038/13690
-
Gygi SP, Rist B, Gerber SA, Turecek F, Gelb MH, Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17(10), 994-999 (1999). (Pubitemid 29474856)
-
(1999)
Nature Biotechnology
, vol.17
, Issue.10
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
5
-
-
23144442824
-
Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides
-
DOI 10.1038/nmeth774
-
Beynon RJ, Doherty MK, Pratt JM, Gaskell SJ. Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides. Nat. Methods 2(8), 587-589 (2005). (Pubitemid 41086849)
-
(2005)
Nature Methods
, vol.2
, Issue.8
, pp. 587-589
-
-
Beynon, R.J.1
Doherty, M.K.2
Pratt, J.M.3
Gaskell, S.J.4
-
6
-
-
61849108453
-
Protein turnover in mammaliar cell cultures
-
Eagle H, Piez KA, Fleischman R, Oyama VI. Protein turnover in mammaliar cell cultures. J. Biol. Chem. 234(3), 592-597 (1959).
-
(1959)
J. Biol. Chem.
, vol.234
, Issue.3
, pp. 592-597
-
-
Eagle, H.1
Piez, K.A.2
Fleischman, R.3
Oyama, V.I.4
-
7
-
-
0030895921
-
A comparison of selected mRNA and protein abundances in human liver
-
DOI 10.1002/elps.1150180333
-
Anderson L, Seilhamer J. A comparison of selected mRNA and protein abundances in human liver. Electrophoresis 18(3-4), 533-537 (1997). (Pubitemid 27174443)
-
(1997)
Electrophoresis
, vol.18
, Issue.3-4
, pp. 533-537
-
-
Anderson, L.1
Seilhamer, J.2
-
8
-
-
0036549767
-
Discordant protein and mRNA expression in lung adenocarcinomas
-
Chen G, Gharib TG, Huang CC et al. Discordant protein and mRNA expression in lung adenocarcinomas. Mol. Cell Proteomics 1(4), 304-313 (2002).
-
(2002)
Mol. Cell Proteomics
, vol.1
, Issue.4
, pp. 304-313
-
-
Chen, G.1
Gharib, T.G.2
Huang, C.C.3
-
9
-
-
0347132484
-
Insights into the Relation between mRNA and Protein Expression Patterns: I. Theoretical Considerations
-
DOI 10.1002/bit.10860
-
Mehra A, Lee KH, Hatzimanikatis V. Insights into the relation between mRNA and protein expression patterns: I. Theoretical considerations. Biotechnol. Bioeng. 84(7), 822-833 (2003). (Pubitemid 38089697)
-
(2003)
Biotechnology and Bioengineering
, vol.84
, Issue.7
, pp. 822-833
-
-
Mehra, A.1
Lee, K.H.2
Hatzimanikatis, V.3
-
10
-
-
37149006535
-
Ubiquitin-proteasome system dysfunction in Parkinsons disease: Current evidence and controversies
-
Lim KL. Ubiquitin-proteasome system dysfunction in Parkinsons disease: current evidence and controversies. Expert Rev. Proteomics 4(6), 769-781 (2007).
-
(2007)
Expert Rev. Proteomics
, vol.4
, Issue.6
, pp. 769-781
-
-
Lim, K.L.1
-
11
-
-
3242733689
-
Nitrosative stress linked to sporadic Parkinson's disease: S-nitrosylation of parkin regulates its E3 ubiquitin ligase activity
-
DOI 10.1073/pnas.0404161101
-
Yao D, Gu Z, Nakamura T et al. Nitrosative stress linked to sporadic Parkinsons disease: S-nitrosylation of parkin regulates its E3 ubiquitin ligase activity. Proc. Natl Acad. Sci. USA 101(29), 10810-10814 (2004). (Pubitemid 38955824)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.29
, pp. 10810-10814
-
-
Yao, D.1
Gu, Z.2
Nakamura, T.3
Shi, Z.-Q.4
Ma, Y.5
Gaston, B.6
Palmer, L.A.7
Rockenstein, E.M.8
Zhang, Z.9
Masliah, E.10
Uehara, T.11
Lipton, S.A.12
-
12
-
-
64749103737
-
Ubiquitination and cysteine nitrosylation during aging and Alzheimers disease
-
Riederer IM, Schiffrin M, Kovari E, Bouras C, Riederer BM. Ubiquitination and cysteine nitrosylation during aging and Alzheimers disease. Brain Res. Bull. 80(4-5), 233-241 (2009).
-
(2009)
Brain Res. Bull.
, vol.80
, Issue.4-5
, pp. 233-241
-
-
Riederer, I.M.1
Schiffrin, M.2
Kovari, E.3
Bouras, C.4
Riederer, B.M.5
-
13
-
-
38449094180
-
Role of the ubiquitin proteasome system in Alzheimers disease
-
Upadhya SC, Hegde AN. Role of the ubiquitin proteasome system in Alzheimers disease. BMC Biochem. 8(Suppl. 1), S12 (2007).
-
(2007)
BMC Biochem.
, vol.8
, Issue.SUPPL. 1
-
-
Upadhya, S.C.1
Hegde, A.N.2
-
14
-
-
34250798032
-
Over-expression of genes and proteins of ubiquitin specific peptidases (USPs) and proteasome subunits (PSs) in breast cancer tissue observed by the methods of RFDD-PCR and proteomics
-
DOI 10.1007/s10549-006-9393-7
-
Deng S, Zhou H, Xiong R et al. Over-expression of genes and proteins of ubiquitin specific peptidases (USPs) and proteasome subunits (PSs) in breast cancer tissue observed by the methods of RFDD-PCR and proteomics. Breast Cancer Res. Treat. 104(1), 21-30 (2007). (Pubitemid 46976634)
-
(2007)
Breast Cancer Research and Treatment
, vol.104
, Issue.1
, pp. 21-30
-
-
Deng, S.1
Zhou, H.2
Xiong, R.3
Lu, Y.4
Yan, D.5
Xing, T.6
Dong, L.7
Tang, E.8
Yang, H.9
-
15
-
-
69949106925
-
The double-edged sword of autophagy modulation in cancer
-
White E, DiPaola RS. The double-edged sword of autophagy modulation in cancer. Clin. Cancer Res. 15(17), 5308-5316 (2009).
-
(2009)
Clin. Cancer Res.
, vol.15
, Issue.17
, pp. 5308-5316
-
-
White, E.1
Dipaola, R.S.2
-
16
-
-
0036086946
-
Aminoacyl-tRNA enrichment after a flood of labeled phenylalanine: Insulin effect on muscle protein synthesis
-
Caso G, Ford GC, Nair KS, Garlick PJ, McNurlan MA. Aminoacyl-tRNA enrichment after a flood of labeled phenylalanine: insulin effect on muscle protein synthesis. Am. J. Physiol. Endocrinol. Metab. 282(5), E1029-E1038 (2002). (Pubitemid 34654716)
-
(2002)
American Journal of Physiology - Endocrinology and Metabolism
, vol.282
, Issue.5
-
-
Caso, G.1
Charles Ford, G.2
Sreekumaran Nair, K.3
Garlick, P.J.4
McNurlan, M.A.5
-
17
-
-
0032981185
-
Recycling, channeling and heterogeneous protein turnover estimation using a model of whole-body protein turnover based on leucine kinetics in rodents
-
Johnson HA, Baldwin RL, France J, Calvert CC. Recycling, channeling and heterogeneous protein turnover estimation using a model of whole-body protein turnover based on leucine kinetics in rodents. J. Nutr. 129(3), 740-750 (1999). (Pubitemid 29118060)
-
(1999)
Journal of Nutrition
, vol.129
, Issue.3
, pp. 740-750
-
-
Johnson, H.A.1
Baldwin, R.L.2
France, J.3
Calvert, C.C.4
-
18
-
-
0032981639
-
A model of whole-body protein turnover based on leucine kinetics in rodents
-
Johnson HA, Baldwin RL, France J, Calvert CC. A model of whole-body protein turnover based on leucine kinetics in rodents. J. Nutr. 129(3), 728-739 (1999). (Pubitemid 29118059)
-
(1999)
Journal of Nutrition
, vol.129
, Issue.3
, pp. 728-739
-
-
Johnson, H.A.1
Baldwin, R.L.2
France, J.3
Calvert, C.C.4
-
19
-
-
0032783115
-
Aminoacyl-tRNA and tissue free amino acids pools are equilibrated after a flooding dose of phenylalanine
-
Davis TA, Fiorotto ML, Nguyen HV, Burrin DG. Aminoacyl-tRNA and tissue free amino acid pools are equilibrated after a flooding dose of phenylalanine. Am. J. Physiol. 277(1 Pt 1), E103-E109 (1999). (Pubitemid 29356733)
-
(1999)
American Journal of Physiology - Endocrinology and Metabolism
, vol.277
, Issue.1
-
-
Davis, T.A.1
Fiorotto, M.L.2
Nguyen, H.V.3
Burrin, D.G.4
-
20
-
-
0033080750
-
Measuring protein synthesis by mass isotopomer distribution analysis (MIDA)
-
DOI 10.1006/abio.1998.2958
-
Papageorgopoulos C, Caldwell K, Shackleton C, Schweingrubber H, Hellerstein MK. Measuring protein synthesis by mass isotopomer distribution analysis (MIDA). Anal. Biochem. 267(1), 1-16 (1999 (Pubitemid 29061800)
-
(1999)
Analytical Biochemistry
, vol.267
, Issue.1
, pp. 1-16
-
-
Papageorgopoulos, C.1
Caldwell, K.2
Shackleton, C.3
Schweingrubber, H.4
Hellerstein, M.K.5
-
21
-
-
0032618619
-
Of flux and flooding: The advantages and problems of different isotopic methods for quantifying protein turnover in vivo: I. Methods based on the dilution of a tracer
-
DOI 10.1097/00075197-199901000-00005
-
Reeds PJ, Davis TA. Of flux and flooding: the advantages and problems of different isotopic methods for quantifying protein turnover in vivo: I. Methods based on the dilution of a tracer. Curr. Opin. Clin. Nutr. Metab. Care 2(1), 23-28 (1999). (Pubitemid 129628622)
-
(1999)
Current Opinion in Clinical Nutrition and Metabolic Care
, vol.2
, Issue.1
, pp. 23-28
-
-
Reeds, P.J.1
Davis, T.A.2
-
22
-
-
0033507216
-
An introduction to the use of tracers in nutrition and metabolism
-
Rennie MJ. An introduction to the use of tracers in nutrition and metabolism. Proc. Nutr. Soc. 58(4), 935-944 (1999). (Pubitemid 30238882)
-
(1999)
Proceedings of the Nutrition Society
, vol.58
, Issue.4
, pp. 935-944
-
-
Rennie, M.J.1
-
23
-
-
0016824053
-
Leucine. A possible regulator of protein turnover in muscle
-
Buse MG, Reid SS. Leucine. A possible regulator of protein turnover in muscle. J. Clin. Invest. 56(5), 1250-1261 (1975).
-
(1975)
J. Clin. Invest.
, vol.56
, Issue.5
, pp. 1250-1261
-
-
Buse, M.G.1
Reid, S.S.2
-
24
-
-
0030928159
-
The effect of an increase of protein intake on whole-body protein turnover in elderly women is tracer dependent
-
Pannemans DL, Wagenmakers AJ, Westerterp KR, Schaafsma G, Halliday D. The effect of an increase of protein intake on whole-body protein turnover in elderly women is tracer dependent. J. Nutr. 127(9), 1788-1794 (1997). (Pubitemid 27386405)
-
(1997)
Journal of Nutrition
, vol.127
, Issue.9
, pp. 1788-1794
-
-
Pannemans, D.L.E.1
Wagenmakers, A.J.M.2
Westerterp, K.R.3
Schaafsma, G.4
Halliday, D.5
-
25
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
Ong SE, Blagoev B, Kratchmarova I et al. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell Proteomics 1(5), 376-386 (2002).
-
(2002)
Mol. Cell Proteomics
, vol.1
, Issue.5
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
-
26
-
-
11944274520
-
Nucleolar proteome dynamics
-
DOI 10.1038/nature03207
-
Andersen JS, Lam YW, Leung AK et al. Nucleolar proteome dynamics. Nature 433(7021), 77-83 (2005). (Pubitemid 40101146)
-
(2005)
Nature
, vol.433
, Issue.7021
, pp. 77-83
-
-
Andersen, J.S.1
Lam, Y.W.2
Leung, A.K.L.3
Ong, S.-E.4
Lyon, C.E.5
Lamond, A.I.6
Mann, M.7
-
27
-
-
77952226764
-
Super-SILAC mix for quantitative proteomics of human tumor tissue
-
Geiger T, Cox J, Ostasiewicz P, Wisniewski JR, Mann M. Super-SILAC mix for quantitative proteomics of human tumor tissue. Nat. Methods 7(5), 383-385 (2010).
-
(2010)
Nat. Methods
, vol.7
, Issue.5
, pp. 383-385
-
-
Geiger, T.1
Cox, J.2
Ostasiewicz, P.3
Wisniewski, J.R.4
Mann, M.5
-
28
-
-
44449162195
-
Absolute SILAC for accurate quantitation of proteins in complex mixtures down to the attomole level
-
Hanke S, Besir H, Oesterhelt D, Mann M. Absolute SILAC for accurate quantitation of proteins in complex mixtures down to the attomole level. J. Proteome Res. 7(3), 1118-1130 (2008).
-
(2008)
J. Proteome Res.
, vol.7
, Issue.3
, pp. 1118-1130
-
-
Hanke, S.1
Besir, H.2
Oesterhelt, D.3
Mann, M.4
-
29
-
-
33845329203
-
Functional and quantitative proteomics using SILAC
-
DOI 10.1038/nrm2067, PII NRM2067
-
Mann M. Functional and quantitative proteomics using SILAC. Nat. Rev. Mol. Cell Biol. 7(12), 952-958 (2006). (Pubitemid 44871421)
-
(2006)
Nature Reviews Molecular Cell Biology
, vol.7
, Issue.12
, pp. 952-958
-
-
Mann, M.1
-
30
-
-
0025917715
-
Comparison of 14C-amino acid mixture and [35S]methionine labeling of cellular proteins from mouse fibroblast C3H10T1/2 cells by two-dimensional gel electrophoresis
-
He CY, Merrick BA, Mansfield BK, Hite MC, Daluge DR, Selkirk JK. Comparison of 14C-amino acid mixture and [35S]methionine labeling of cellular proteins from mouse fibroblast C3H10T1/2 cells by two-dimensional gel electrophoresis. Electrophoresis 12(9), 658-666 (1991).
-
(1991)
Electrophoresis
, vol.12
, Issue.9
, pp. 658-666
-
-
He, C.Y.1
Merrick, B.A.2
Mansfield, B.K.3
Hite, M.C.4
Daluge, D.R.5
Selkirk, J.K.6
-
31
-
-
0036692065
-
Dynamics of protein turnover, a missing dimension in proteomics
-
Pratt JM, Petty J, Riba-Garcia I et al. Dynamics of protein turnover, a missing dimension in proteomics. Mol. Cell Proteomics 1(8), 579-591 (2002).
-
(2002)
Mol. Cell Proteomics
, vol.1
, Issue.8
, pp. 579-591
-
-
Pratt, J.M.1
Petty, J.2
Riba-Garcia, I.3
-
32
-
-
10644264337
-
A combination of protein profiling and isotopomer analysis using matrix-assisted laser desorption/ionization-time of flight spectrometry reveals an active metabolism of the extracellular matrix of 3T3-L1 adipocytes
-
DOI 10.1002/pmic.200400861
-
Bouwman F, Renes J, Mariman E. A combination of protein profiling and isotopomer analysis using matrix-assisted laser desorption/ionization-time of flight mass spectrometry reveals an active metabolism of the extracellular matrix of 3T3-L1 adipocytes. Proteomics 4(12), 3855-3863 (2004). (Pubitemid 39657462)
-
(2004)
Proteomics
, vol.4
, Issue.12
, pp. 3855-3863
-
-
Bouwman, F.1
Renes, J.2
Mariman, E.3
-
33
-
-
0347361590
-
Synthesis/Degradation Ratio Mass Spectrometry for Measuring Relative Dynamic Protein Turnover
-
DOI 10.1021/ac034841a
-
Cargile BJ, Bundy JL, Grunden AM, Stephenson JL Jr. Synthesis/degradation ratio mass spectrometry for measuring relative dynamic protein turnover. Anal. Chem. 76(1), 86-97 (2004). (Pubitemid 38040636)
-
(2004)
Analytical Chemistry
, vol.76
, Issue.1
, pp. 86-97
-
-
Cargile, B.J.1
Bundy, J.L.2
Grunden, A.M.3
Stephenson Jr., J.L.4
-
34
-
-
13844317869
-
Proteome dynamics in complex organisms: Using stable isotopes to monitor individual protein turnover rates
-
DOI 10.1002/pmic.200400959
-
Doherty MK, Whitehead C, McCormack H, Gaskell SJ, Beynon RJ. Proteome dynamics in complex organisms: using stable isotopes to monitor individual protein turnover rates. Proteomics 5(2), 522-533 (2005 (Pubitemid 40262069)
-
(2005)
Proteomics
, vol.5
, Issue.2
, pp. 522-533
-
-
Doherty, M.K.1
Whitehead, C.2
McCormack, H.3
Gaskell, S.J.4
Beynon, R.J.5
-
35
-
-
33646106593
-
Measurement of protein turnover rates by heavy water labeling of nonessential amino acids
-
Busch R, Kim YK, Neese RA et al. Measurement of protein turnover rates by heavy water labeling of nonessential amino acids. Biochim. Biophys. Acta 1760(5), 730-744 (2006
-
(2006)
Biochim. Biophys. Acta
, vol.1760
, Issue.5
, pp. 730-744
-
-
Busch, R.1
Kim, Y.K.2
Neese, R.A.3
-
36
-
-
0026448766
-
Mass isotopomer distribution analysis: A technique for measuring biosynthesis and turnover of polymers
-
Hellerstein MK, Neese RA. Mass isotopomer distribution analysis: a technique for measuring biosynthesis and turnover of polymers. Am. J. Physiol. 263(5 Pt 1), E988-E1001 (1992).
-
(1992)
Am. J. Physiol.
, vol.263
, Issue.5 PART 1
-
-
Hellerstein, M.K.1
Neese, R.A.2
-
37
-
-
0033038503
-
Mass isotopomer distribution analysis at eight years: Theoretical, analytic, and experimental considerations
-
Hellerstein MK, Neese RA. Mass isotopomer distribution analysis at eight years: theoretical, analytic, and experimental considerations. Am. J. Physiol. 276(6 Pt 1), E1146-E1170 (1999). (Pubitemid 29323432)
-
(1999)
American Journal of Physiology - Endocrinology and Metabolism
, vol.276
, Issue.6
-
-
Hellerstein, M.K.1
Neese, R.A.2
-
38
-
-
47549099572
-
SILAC Mouse for Quantitative Proteomics Uncovers Kindlin-3 as an Essential Factor for Red Blood Cell Function
-
DOI 10.1016/j.cell.2008.05.033, PII S0092867408006958
-
Kruger M, Moser M, Ussar S et al. SILAC mouse for quantitative proteomics uncovers kindlin-3 as an essential factor for red blood cell function. Cell 134(2), 353-364 (2008). (Pubitemid 352010327)
-
(2008)
Cell
, vol.134
, Issue.2
, pp. 353-364
-
-
Kruger, M.1
Moser, M.2
Ussar, S.3
Thievessen, I.4
Luber, C.A.5
Forner, F.6
Schmidt, S.7
Zanivan, S.8
Fassler, R.9
Mann, M.10
-
39
-
-
77956271728
-
Analysis of proteome dynamics in the mouse brain
-
Price JC, Guan S, Burlingame A, Prusiner SB, Ghaemmaghami S. Analysis of proteome dynamics in the mouse brain. Proc. Natl Acad. Sci. USA 107(32), 14508-14513 (2010).
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, Issue.32
, pp. 14508-14513
-
-
Price, J.C.1
Guan, S.2
Burlingame, A.3
Prusiner, S.B.4
Ghaemmaghami, S.5
-
40
-
-
0041706161
-
Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics
-
DOI 10.1038/nbt848
-
Krijgsveld J, Ketting RF, Mahmoudi T et al. Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics. Nat. Biotechnol. 21(8), 927-931 (2003). (Pubitemid 36936200)
-
(2003)
Nature Biotechnology
, vol.21
, Issue.8
, pp. 927-931
-
-
Krijgsveld, J.1
Ketting, R.F.2
Mahmoudi, T.3
Johansen, J.4
Artal-Sanz, M.5
Verrijzer, C.P.6
Plasterk, R.H.A.7
Heck, A.J.R.8
-
41
-
-
76649083593
-
Quantitative proteomics by metabolic labeling of model organisms
-
Gouw JW, Krijgsveld J, Heck AJR. Quantitative proteomics by metabolic labeling of model organisms. Mol. Cell. Proteomics 9(1), 11-24 (2010).
-
(2010)
Mol. Cell. Proteomics
, vol.9
, Issue.1
, pp. 11-24
-
-
Gouw, J.W.1
Krijgsveld, J.2
Heck, A.J.R.3
-
42
-
-
60849097304
-
Turnover of the human proteome: Determination of protein intracellular stability by dynamic SILAC
-
Doherty MK, Hammond DE, Clague MJ, Gaskell SJ, Beynon RJ. Turnover of the human proteome: determination of protein intracellular stability by dynamic SILAC. J. Proteome Res. 8(1), 104-112 (2009
-
(2009)
J. Proteome Res.
, vol.8
, Issue.1
, pp. 104-112
-
-
Doherty, M.K.1
Hammond, D.E.2
Clague, M.J.3
Gaskell, S.J.4
Beynon, R.J.5
-
43
-
-
59449085150
-
Global analysis of cellular protein translation by pulsed SILAC
-
Schwanhäusser B, Gossen M, Dittmar G, Selbach M. Global analysis of cellular protein translation by pulsed SILAC. Proteomics 9(1), 205-209 (2009
-
(2009)
Proteomics
, vol.9
, Issue.1
, pp. 205-209
-
-
Schwanhäusser, B.1
Gossen, M.2
Dittmar, G.3
Selbach, M.4
-
44
-
-
77955049920
-
Global assessment of protein turnover in recombinant antibody producing myeloma cells
-
Yee JC, Jacob NM, Jayapal KP et al. Global assessment of protein turnover in recombinant antibody producing myeloma cells. J. Biotechnol. 148(4), 182-193 (2010).
-
(2010)
J. Biotechnol.
, vol.148
, Issue.4
, pp. 182-193
-
-
Yee, J.C.1
Jacob, N.M.2
Jayapal, K.P.3
-
45
-
-
70349267528
-
Stable isotope pulse-chase monitored by quantitative mass spectrometry applied to E. coli 30S ribosome assembly kinetics
-
Bunner AE, Williamson JR. Stable isotope pulse-chase monitored by quantitative mass spectrometry applied to E. coli 30S ribosome assembly kinetics. Methods 49(2), 136-141 (2009).
-
(2009)
Methods
, vol.49
, Issue.2
, pp. 136-141
-
-
Bunner, A.E.1
Williamson, J.R.2
-
46
-
-
77952021862
-
Multitagging proteomic strategy to estimate protein turnover rates in dynamic systems
-
Jayapal KP, Sui S, Philp RJ et al. Multitagging proteomic strategy to estimate protein turnover rates in dynamic systems. J. Proteome Res. 9(5), 2087-2097 (2010).
-
(2010)
J. Proteome Res.
, vol.9
, Issue.5
, pp. 2087-2097
-
-
Jayapal, K.P.1
Sui, S.2
Philp, R.J.3
-
47
-
-
38349117099
-
Determination of global protein turnover in stressed mycobacterium cells using hybrid-linear ion trap-fourier transform mass spectrometry
-
Rao PK, Roxas BAP, Li Q. Determination of global protein turnover in stressed mycobacterium cells using hybrid-linear ion trap-fourier transform mass spectrometry. Anal. Chem. 80(2), 396-406 (2008).
-
(2008)
Anal. Chem.
, vol.80
, Issue.2
, pp. 396-406
-
-
Rao, P.K.1
Bap, R.2
Li, Q.3
-
48
-
-
77953358873
-
Measurement of protein synthesis using heavy water labeling and peptide mass spectrometry: Discrimination between major histocompatibility complex allotypes
-
De Riva A, Deery MJ, McDonald S, Lund T, Busch R. Measurement of protein synthesis using heavy water labeling and peptide mass spectrometry: discrimination between major histocompatibility complex allotypes. Anal. Biochem. 403(1-2), 1-12 (2010).
-
(2010)
Anal. Biochem.
, vol.403
, Issue.1-2
, pp. 1-12
-
-
De Riva, A.1
Deery, M.J.2
McDonald, S.3
Lund, T.4
Busch, R.5
-
50
-
-
77955679608
-
Measuring the turnover rates of Arabidopsis proteins using deuterium oxide: An auxin signaling case study
-
Yang XY, Chen WP, Rendahl AK, Hegeman AD, Gray WM, Cohen JD. Measuring the turnover rates of Arabidopsis proteins using deuterium oxide: an auxin signaling case study. Plant J. 63(4), 680-695 (2010
-
(2010)
Plant J.
, vol.63
, Issue.4
, pp. 680-695
-
-
Yang, X.Y.1
Chen, W.P.2
Rendahl, A.K.3
Hegeman, A.D.4
Gray, W.M.5
Cohen, J.D.6
-
51
-
-
33748377124
-
Quantification of protein half-lives in the budding yeast proteome
-
DOI 10.1073/pnas.0605420103
-
Belle A, Tanay A, Bitincka L, Shamir R, OShea EK. Quantification of protein half lifes in the budding yeast proteome. Proc. Natl Acad. Sci. USA 103(35), 13004-13009 (2006 (Pubitemid 44338907)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.35
, pp. 13004-13009
-
-
Belle, A.1
Tanay, A.2
Bitincka, L.3
Shamir, R.4
O'Shea, E.K.5
-
52
-
-
41149125082
-
Structural disorder serves as a weak signal for intracellular protein degradation
-
DOI 10.1002/prot.21773
-
Tompa P, Prilusky J, Silman I, Sussman JL. Structural disorder serves as a weak signal for intracellular protein degradation. Proteins 71(2), 903-909 (2008). (Pubitemid 351430024)
-
(2008)
Proteins: Structure, Function and Genetics
, vol.71
, Issue.2
, pp. 903-909
-
-
Tompa, P.1
Prilusky, J.2
Silman, I.3
Sussman, J.L.4
-
53
-
-
55849133733
-
Identification of SCF ubiquitin ligase substrates by global protein stability profiling
-
Yen HC, Elledge SJ. Identification of SCF ubiquitin ligase substrates by global protein stability profiling. Science 322(5903), 923-929 (2008
-
(2008)
Science
, vol.322
, Issue.5903
, pp. 923-929
-
-
Yen, H.C.1
Elledge, S.J.2
-
54
-
-
14744293536
-
Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra
-
Venable JD, Dong MQ, Wohlschlegel J, Dillin A, Yates JR. Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra. Nat. Methods 1(1), 39-45 (2004).
-
(2004)
Nat. Methods
, vol.1
, Issue.1
, pp. 39-45
-
-
Venable, J.D.1
Dong, M.Q.2
Wohlschlegel, J.3
Dillin, A.4
Yates, J.R.5
-
55
-
-
0346122950
-
A Correlation Algorithm for the Automated Quantitative Analysis of Shotgun Proteomics Data
-
DOI 10.1021/ac034790h
-
MacCoss MJ, Wu CC, Liu H, Sadygov R, Yates JR 3rd. A correlation algorithm for the automated quantitative analysis of shotgun proteomics data. Anal. Chem. 75(24), 6912-6921 (2003). (Pubitemid 37523592)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.24
, pp. 6912-6921
-
-
MacCoss, M.J.1
Wu, C.C.2
Liu, H.3
Sadygov, R.4
Yates III, J.R.5
-
56
-
-
73649131275
-
MSQuant, an open source platform for mass spectrometry-based quantitative proteomics
-
Mortensen P, Gouw JW, Olsen JV et al. MSQuant, an open source platform for mass spectrometry-based quantitative proteomics. J. Proteome Res. 9(1), 393-403 (2010).
-
(2010)
J. Proteome Res.
, vol.9
, Issue.1
, pp. 393-403
-
-
Mortensen, P.1
Gouw, J.W.2
Olsen, J.V.3
-
57
-
-
67649400942
-
A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics
-
Cox J, Matic I, Hilger M et al. A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics. Nat. Protoc. 4(5), 698-705 (2009).
-
(2009)
Nat. Protoc
, vol.4
, Issue.5
, pp. 698-705
-
-
Cox, J.1
Matic, I.2
Hilger, M.3
-
58
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
Cox J, Mann M. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol. 26(12), 1367-1372 (2008).
-
(2008)
Nat. Biotechnol.
, vol.26
, Issue.12
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
59
-
-
79959487394
-
Out with the old, in with the new? Comparing methods for measuring protein degradation
-
Yewdell JW, Lacsina JR, Rechsteiner MC, Nicchitta CV. Out with the old, in with the new? Comparing methods for measuring protein degradation. Cell Biol. Int. 35, 457-462 (2011
-
(2011)
Cell Biol. Int.
, vol.35
, pp. 457-462
-
-
Yewdell, J.W.1
Lacsina, J.R.2
Rechsteiner, M.C.3
Nicchitta, C.V.4
-
61
-
-
79959392769
-
-
MaxQuant www.maxquant.org
-
MaxQuant
-
-
-
62
-
-
79959463041
-
-
MSQuant http://msquant.alwaysdata.net/msq
-
MSQuant
-
-
-
63
-
-
79959395557
-
-
Research Institute. Research tools
-
Yates Lab, the Scripps Research Institute. Research tools http://fields.scripps.edu/researchtools.php
-
-
-
Lab The Scripps, Y.1
|