메뉴 건너뛰기




Volumn 12, Issue 5, 2011, Pages

Path finding methods accounting for stoichiometry in metabolic networks

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; GLUCOSE 6 PHOSPHATE; PHOSPHOENOLPYRUVATE; PHOSPHOTRANSFERASE; PYRUVATE PHOSPHOTRANSFERASE; UNCLASSIFIED DRUG;

EID: 79957473580     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2011-12-5-r49     Document Type: Article
Times cited : (43)

References (56)
  • 1
    • 33748798478 scopus 로고    scopus 로고
    • Graph-based methods for analysing networks in cell biology.
    • 10.1093/bib/bbl022, 16880171
    • Aittokallio T, Schwikowski B. Graph-based methods for analysing networks in cell biology. Brief Bioinform 2006, 7:243-255. 10.1093/bib/bbl022, 16880171.
    • (2006) Brief Bioinform , vol.7 , pp. 243-255
    • Aittokallio, T.1    Schwikowski, B.2
  • 2
    • 0034609791 scopus 로고    scopus 로고
    • The large-scale organization of metabolic networks.
    • 10.1038/35036627, 11034217
    • Jeong H, Tombor B, Albert R, Oltvai ZN, Barabasi AL. The large-scale organization of metabolic networks. Nature 2000, 407:651-654. 10.1038/35036627, 11034217.
    • (2000) Nature , vol.407 , pp. 651-654
    • Jeong, H.1    Tombor, B.2    Albert, R.3    Oltvai, Z.N.4    Barabasi, A.L.5
  • 3
    • 0042093610 scopus 로고    scopus 로고
    • The connectivity structure, giant strong component and centrality of metabolic networks.
    • 10.1093/bioinformatics/btg177, 12874056
    • Ma HW, Zeng AP. The connectivity structure, giant strong component and centrality of metabolic networks. Bioinformatics 2003, 19:1423-1430. 10.1093/bioinformatics/btg177, 12874056.
    • (2003) Bioinformatics , vol.19 , pp. 1423-1430
    • Ma, H.W.1    Zeng, A.P.2
  • 4
    • 1242319556 scopus 로고    scopus 로고
    • The metabolic world of Escherichia coli is not small.
    • 10.1073/pnas.0306458101, 341771, 14757824
    • Arita M. The metabolic world of Escherichia coli is not small. Proc Natl Acad Sci USA 2004, 101:1543-1547. 10.1073/pnas.0306458101, 341771, 14757824.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 1543-1547
    • Arita, M.1
  • 5
    • 77649162284 scopus 로고    scopus 로고
    • When metabolism meets topology: Reconciling metabolite and reaction networks.
    • 10.1002/bies.200900145, 20127701
    • Montanez R, Medina MA, Sole RV, Rodriguez-Caso C. When metabolism meets topology: Reconciling metabolite and reaction networks. Bioessays 2010, 32:246-256. 10.1002/bies.200900145, 20127701.
    • (2010) Bioessays , vol.32 , pp. 246-256
    • Montanez, R.1    Medina, M.A.2    Sole, R.V.3    Rodriguez-Caso, C.4
  • 6
    • 0033764169 scopus 로고    scopus 로고
    • The small world of metabolism.
    • 10.1038/81025, 11062388
    • Fell DA, Wagner A. The small world of metabolism. Nat Biotechnol 2000, 18:1121-1122. 10.1038/81025, 11062388.
    • (2000) Nat Biotechnol , vol.18 , pp. 1121-1122
    • Fell, D.A.1    Wagner, A.2
  • 7
    • 0035823264 scopus 로고    scopus 로고
    • The small world inside large metabolic networks.
    • 10.1098/rspb.2001.1711, 1088812, 11522199
    • Wagner A, Fell DA. The small world inside large metabolic networks. Proc Biol Sci 2001, 268:1803-1810. 10.1098/rspb.2001.1711, 1088812, 11522199.
    • (2001) Proc Biol Sci , vol.268 , pp. 1803-1810
    • Wagner, A.1    Fell, D.A.2
  • 8
    • 70350482286 scopus 로고    scopus 로고
    • Evolution of biomolecular networks: lessons from metabolic and protein interactions.
    • 10.1038/nrm2787, 19851337
    • Yamada T, Bork P. Evolution of biomolecular networks: lessons from metabolic and protein interactions. Nat Rev Mol Cell Biol 2009, 10:791-803. 10.1038/nrm2787, 19851337.
    • (2009) Nat Rev Mol Cell Biol , vol.10 , pp. 791-803
    • Yamada, T.1    Bork, P.2
  • 9
    • 30344456708 scopus 로고    scopus 로고
    • Inferring meaningful pathways in weighted metabolic networks.
    • 10.1016/j.jmb.2005.09.079, 16337962
    • Croes D, Couche F, Wodak SJ, van Helden J. Inferring meaningful pathways in weighted metabolic networks. J Mol Biol 2006, 356:222-236. 10.1016/j.jmb.2005.09.079, 16337962.
    • (2006) J Mol Biol , vol.356 , pp. 222-236
    • Croes, D.1    Couche, F.2    Wodak, S.J.3    van Helden, J.4
  • 10
    • 0037881782 scopus 로고    scopus 로고
    • Metabolic reconstruction using shortest paths.
    • Arita M. Metabolic reconstruction using shortest paths. Simulation Practice Theory 2000, 8:109-125.
    • (2000) Simulation Practice Theory , vol.8 , pp. 109-125
    • Arita, M.1
  • 11
    • 16344376028 scopus 로고    scopus 로고
    • Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC).
    • 10.1093/bioinformatics/bti116, 15572476
    • Rahman SA, Advani P, Schunk R, Schrader R, Schomburg D. Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC). Bioinformatics 2005, 21:1189-1193. 10.1093/bioinformatics/bti116, 15572476.
    • (2005) Bioinformatics , vol.21 , pp. 1189-1193
    • Rahman, S.A.1    Advani, P.2    Schunk, R.3    Schrader, R.4    Schomburg, D.5
  • 12
    • 67349127535 scopus 로고    scopus 로고
    • Path finding approaches and metabolic pathways.
    • Planes FJ, Beasley JE. Path finding approaches and metabolic pathways. Discrete Appl Mathematics 2009, 157:2244-2256.
    • (2009) Discrete Appl Mathematics , vol.157 , pp. 2244-2256
    • Planes, F.J.1    Beasley, J.E.2
  • 13
    • 77952822943 scopus 로고    scopus 로고
    • Pathway discovery in metabolic networks by subgraph extraction.
    • 10.1093/bioinformatics/btq105, 2859126, 20228128
    • Faust K, Dupont P, Callut J, van Helden J. Pathway discovery in metabolic networks by subgraph extraction. Bioinformatics 2010, 26:1211-1218. 10.1093/bioinformatics/btq105, 2859126, 20228128.
    • (2010) Bioinformatics , vol.26 , pp. 1211-1218
    • Faust, K.1    Dupont, P.2    Callut, J.3    van Helden, J.4
  • 14
    • 14544268137 scopus 로고    scopus 로고
    • Uncovering transcriptional regulation of metabolism by using metabolic network topology.
    • 10.1073/pnas.0406811102, 549453, 15710883
    • Patil KR, Nielsen J. Uncovering transcriptional regulation of metabolism by using metabolic network topology. Proc Natl Acad Sci USA 2005, 102:2685-2689. 10.1073/pnas.0406811102, 549453, 15710883.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 2685-2689
    • Patil, K.R.1    Nielsen, J.2
  • 15
    • 77952674482 scopus 로고    scopus 로고
    • Metabolic network topology reveals transcriptional regulatory signatures of type 2 diabetes.
    • 10.1371/journal.pcbi.1000729, 2848542, 20369014
    • Zelezniak A, Pers TH, Soares S, Patti ME, Patil KR. Metabolic network topology reveals transcriptional regulatory signatures of type 2 diabetes. PLoS Comput Biol 2010, 6:e1000729. 10.1371/journal.pcbi.1000729, 2848542, 20369014.
    • (2010) PLoS Comput Biol , vol.6
    • Zelezniak, A.1    Pers, T.H.2    Soares, S.3    Patti, M.E.4    Patil, K.R.5
  • 16
    • 33646200155 scopus 로고    scopus 로고
    • Expression dynamics of a cellular metabolic network.
    • 1681454, 16729051
    • Kharchenko P, Church GM, Vitkup D. Expression dynamics of a cellular metabolic network. Mol Syst Biol 2005, 1:2005.0016. 1681454, 16729051.
    • (2005) Mol Syst Biol , vol.1
    • Kharchenko, P.1    Church, G.M.2    Vitkup, D.3
  • 17
    • 62149124281 scopus 로고    scopus 로고
    • TICL - a web tool for network-based interpretation of compound lists inferred by high-throughput metabolomics.
    • 10.1111/j.1742-4658.2009.06943.x, 19292876
    • Antonov AV, Dietmann S, Wong P, Mewes HW. TICL - a web tool for network-based interpretation of compound lists inferred by high-throughput metabolomics. FEBS J 2009, 276:2084-2094. 10.1111/j.1742-4658.2009.06943.x, 19292876.
    • (2009) FEBS J , vol.276 , pp. 2084-2094
    • Antonov, A.V.1    Dietmann, S.2    Wong, P.3    Mewes, H.W.4
  • 18
    • 60849114746 scopus 로고    scopus 로고
    • KEGG spider: interpretation of genomics data in the context of the global gene metabolic network.
    • 10.1186/gb-2008-9-12-r179, 2646283, 19094223
    • Antonov AV, Dietmann S, Mewes HW. KEGG spider: interpretation of genomics data in the context of the global gene metabolic network. Genome Biol 2008, 9:R179. 10.1186/gb-2008-9-12-r179, 2646283, 19094223.
    • (2008) Genome Biol , vol.9
    • Antonov, A.V.1    Dietmann, S.2    Mewes, H.W.3
  • 19
    • 37549069325 scopus 로고    scopus 로고
    • MetaNetter: inference and visualization of high-resolution metabolomic networks.
    • 10.1093/bioinformatics/btm536, 18003642
    • Jourdan F, Breitling R, Barrett MP, Gilbert D. MetaNetter: inference and visualization of high-resolution metabolomic networks. Bioinformatics 2008, 24:143-145. 10.1093/bioinformatics/btm536, 18003642.
    • (2008) Bioinformatics , vol.24 , pp. 143-145
    • Jourdan, F.1    Breitling, R.2    Barrett, M.P.3    Gilbert, D.4
  • 20
    • 77954253893 scopus 로고    scopus 로고
    • MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks.
    • 10.1093/nar/gkq312, 2896158, 20444866
    • Cottret L, Wildridge D, Vinson F, Barrett MP, Charles H, Sagot MF, Jourdan F. MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks. Nucleic Acids Res 2010, 38:W132-137. 10.1093/nar/gkq312, 2896158, 20444866.
    • (2010) Nucleic Acids Res , vol.38
    • Cottret, L.1    Wildridge, D.2    Vinson, F.3    Barrett, M.P.4    Charles, H.5    Sagot, M.F.6    Jourdan, F.7
  • 21
    • 33747890136 scopus 로고    scopus 로고
    • Observing local and global properties of metabolic pathways: 'load points' and 'choke points' in the metabolic networks.
    • 10.1093/bioinformatics/btl181, 16682421
    • Rahman SA, Schomburg D. Observing local and global properties of metabolic pathways: 'load points' and 'choke points' in the metabolic networks. Bioinformatics 2006, 22:1767-1774. 10.1093/bioinformatics/btl181, 16682421.
    • (2006) Bioinformatics , vol.22 , pp. 1767-1774
    • Rahman, S.A.1    Schomburg, D.2
  • 22
    • 64549142857 scopus 로고    scopus 로고
    • Estimating novel potential drug targets of Plasmodium falciparum by analysing the metabolic network of knock-out strains in silico.
    • 10.1016/j.meegid.2008.01.007, 18313365
    • Fatumo S, Plaimas K, Mallm JP, Schramm G, Adebiyi E, Oswald M, Eils R, König R. Estimating novel potential drug targets of Plasmodium falciparum by analysing the metabolic network of knock-out strains in silico. Infect Genet Evol 2009, 9:351-358. 10.1016/j.meegid.2008.01.007, 18313365.
    • (2009) Infect Genet Evol , vol.9 , pp. 351-358
    • Fatumo, S.1    Plaimas, K.2    Mallm, J.P.3    Schramm, G.4    Adebiyi, E.5    Oswald, M.6    Eils, R.7    König, R.8
  • 23
    • 34547830837 scopus 로고    scopus 로고
    • A network-based method for target selection in metabolic networks.
    • 10.1093/bioinformatics/btm150, 2149892, 17463022
    • Guimera R, Sales-Pardo M, Amaral LA. A network-based method for target selection in metabolic networks. Bioinformatics 2007, 23:1616-1622. 10.1093/bioinformatics/btm150, 2149892, 17463022.
    • (2007) Bioinformatics , vol.23 , pp. 1616-1622
    • Guimera, R.1    Sales-Pardo, M.2    Amaral, L.A.3
  • 24
    • 0347506655 scopus 로고    scopus 로고
    • An overview of data models for the analysis of biochemical pathways.
    • 10.1093/bib/4.3.246, 14582519
    • Deville Y, Gilbert D, van Helden J, Wodak SJ. An overview of data models for the analysis of biochemical pathways. Brief Bioinform 2003, 4:246-259. 10.1093/bib/4.3.246, 14582519.
    • (2003) Brief Bioinform , vol.4 , pp. 246-259
    • Deville, Y.1    Gilbert, D.2    van Helden, J.3    Wodak, S.J.4
  • 25
    • 55749088074 scopus 로고    scopus 로고
    • Can sugars be produced from fatty acids? A test case for pathway analysis tools.
    • 10.1093/bioinformatics/btn500, 18806269
    • de Figueiredo LF, Schuster S, Kaleta C, Fell DA. Can sugars be produced from fatty acids? A test case for pathway analysis tools. Bioinformatics 2008, 24:2615-2621. 10.1093/bioinformatics/btn500, 18806269.
    • (2008) Bioinformatics , vol.24 , pp. 2615-2621
    • de Figueiredo, L.F.1    Schuster, S.2    Kaleta, C.3    Fell, D.A.4
  • 26
    • 75849128878 scopus 로고    scopus 로고
    • Response to comment on "Can sugars be produced from fatty acids? A test case for pathway analysis tools".
    • 10.1093/bioinformatics/btp591, 19825797
    • de Figueiredo LF, Schuster S, Kaleta C, Fell DA. Response to comment on "Can sugars be produced from fatty acids? A test case for pathway analysis tools". Bioinformatics 2009, 25:3330-3331. 10.1093/bioinformatics/btp591, 19825797.
    • (2009) Bioinformatics , vol.25 , pp. 3330-3331
    • de Figueiredo, L.F.1    Schuster, S.2    Kaleta, C.3    Fell, D.A.4
  • 27
    • 75849154006 scopus 로고    scopus 로고
    • In response to "Can sugars be produced from fatty acids? A test case for pathway analysis tools".
    • 10.1093/bioinformatics/btp557, 19776213
    • Faust K, Croes D, van Helden J. In response to "Can sugars be produced from fatty acids? A test case for pathway analysis tools". Bioinformatics 2009, 25:3202-3205. 10.1093/bioinformatics/btp557, 19776213.
    • (2009) Bioinformatics , vol.25 , pp. 3202-3205
    • Faust, K.1    Croes, D.2    van Helden, J.3
  • 28
    • 0034064689 scopus 로고    scopus 로고
    • A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks.
    • 10.1038/73786, 10700151
    • Schuster S, Fell DA, Dandekar T. A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks. Nat Biotechnol 2000, 18:326-332. 10.1038/73786, 10700151.
    • (2000) Nat Biotechnol , vol.18 , pp. 326-332
    • Schuster, S.1    Fell, D.A.2    Dandekar, T.3
  • 29
    • 67049098922 scopus 로고    scopus 로고
    • Hypergraphs and cellular networks.
    • 10.1371/journal.pcbi.1000385, 2673028, 19478865
    • Klamt S, Haus UU, Theis F. Hypergraphs and cellular networks. PLoS Comput Biol 2009, 5:e1000385. 10.1371/journal.pcbi.1000385, 2673028, 19478865.
    • (2009) PLoS Comput Biol , vol.5
    • Klamt, S.1    Haus, U.U.2    Theis, F.3
  • 30
    • 0034615791 scopus 로고    scopus 로고
    • Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective.
    • 10.1006/jtbi.2000.1073, 10716907
    • Schilling CH, Letscher D, Palsson BO. Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective. J Theor Biol 2000, 203:229-248. 10.1006/jtbi.2000.1073, 10716907.
    • (2000) J Theor Biol , vol.203 , pp. 229-248
    • Schilling, C.H.1    Letscher, D.2    Palsson, B.O.3
  • 32
    • 52949098408 scopus 로고    scopus 로고
    • Large-scale computation of elementary flux modes with bit pattern trees.
    • 10.1093/bioinformatics/btn401, 18676417
    • Terzer M, Stelling J. Large-scale computation of elementary flux modes with bit pattern trees. Bioinformatics 2008, 24:2229-2235. 10.1093/bioinformatics/btn401, 18676417.
    • (2008) Bioinformatics , vol.24 , pp. 2229-2235
    • Terzer, M.1    Stelling, J.2
  • 33
    • 75849164426 scopus 로고    scopus 로고
    • Computing the shortest elementary flux modes in genome-scale metabolic networks.
    • 10.1093/bioinformatics/btp564, 19793869
    • de Figueiredo LF, Podhorski A, Rubio A, Kaleta C, Beasley JE, Schuster S, Planes FJ. Computing the shortest elementary flux modes in genome-scale metabolic networks. Bioinformatics 2009, 25:3158-3165. 10.1093/bioinformatics/btp564, 19793869.
    • (2009) Bioinformatics , vol.25 , pp. 3158-3165
    • de Figueiredo, L.F.1    Podhorski, A.2    Rubio, A.3    Kaleta, C.4    Beasley, J.E.5    Schuster, S.6    Planes, F.J.7
  • 35
    • 64449087758 scopus 로고    scopus 로고
    • Metabolic pathfinding using RPAIR annotation.
    • 10.1016/j.jmb.2009.03.006, 19281817
    • Faust K, Croes D, van Helden J. Metabolic pathfinding using RPAIR annotation. J Mol Biol 2009, 388:390-414. 10.1016/j.jmb.2009.03.006, 19281817.
    • (2009) J Mol Biol , vol.388 , pp. 390-414
    • Faust, K.1    Croes, D.2    van Helden, J.3
  • 37
    • 70349990687 scopus 로고    scopus 로고
    • An optimization model for metabolic pathways.
    • 10.1093/bioinformatics/btp441, 19620100
    • Planes FJ, Beasley JE. An optimization model for metabolic pathways. Bioinformatics 2009, 25:2723-2729. 10.1093/bioinformatics/btp441, 19620100.
    • (2009) Bioinformatics , vol.25 , pp. 2723-2729
    • Planes, F.J.1    Beasley, J.E.2
  • 39
    • 0242574984 scopus 로고    scopus 로고
    • In silico atomic tracing by substrate-product relationships in Escherichia coli intermediary metabolism.
    • 10.1101/gr.1212003, 403765, 14559781
    • Arita M. In silico atomic tracing by substrate-product relationships in Escherichia coli intermediary metabolism. Genome Res 2003, 13:2455-2466. 10.1101/gr.1212003, 403765, 14559781.
    • (2003) Genome Res , vol.13 , pp. 2455-2466
    • Arita, M.1
  • 40
    • 47549099578 scopus 로고    scopus 로고
    • Using atom mapping rules for an improved detection of relevant routes in weighted metabolic networks.
    • 10.1089/cmb.2008.0044, 18631021
    • Blum T, Kohlbacher O. Using atom mapping rules for an improved detection of relevant routes in weighted metabolic networks. J Comput Biol 2008, 15:565-576. 10.1089/cmb.2008.0044, 18631021.
    • (2008) J Comput Biol , vol.15 , pp. 565-576
    • Blum, T.1    Kohlbacher, O.2
  • 41
    • 77954188312 scopus 로고    scopus 로고
    • Finding metabolic pathways using atom tracking.
    • 10.1093/bioinformatics/btq223, 2881407, 20421197
    • Heath AP, Bennett GN, Kavraki LE. Finding metabolic pathways using atom tracking. Bioinformatics 2010, 26:1548-1555. 10.1093/bioinformatics/btq223, 2881407, 20421197.
    • (2010) Bioinformatics , vol.26 , pp. 1548-1555
    • Heath, A.P.1    Bennett, G.N.2    Kavraki, L.E.3
  • 42
    • 77951612556 scopus 로고    scopus 로고
    • BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions.
    • 10.1186/1471-2105-11-213, 2874806, 20426874
    • Schellenberger J, Park JO, Conrad TM, Palsson BO. BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions. BMC Bioinformatics 2010, 11:213. 10.1186/1471-2105-11-213, 2874806, 20426874.
    • (2010) BMC Bioinformatics , vol.11 , pp. 213
    • Schellenberger, J.1    Park, J.O.2    Conrad, T.M.3    Palsson, B.O.4
  • 43
    • 79960889609 scopus 로고    scopus 로고
    • AtomMetaNetWeb.
    • AtomMetaNetWeb. , http://www.kavrakilab.org/atommetanetweb/#home
  • 45
    • 17644375240 scopus 로고    scopus 로고
    • The PEP-pyruvate-oxaloacetate node as the switch point for carbon flux distribution in bacteria.
    • 10.1016/j.femsre.2004.11.002, 16102602
    • Sauer U, Eikmanns BJ. The PEP-pyruvate-oxaloacetate node as the switch point for carbon flux distribution in bacteria. FEMS Microbiol Rev 2005, 29:765-794. 10.1016/j.femsre.2004.11.002, 16102602.
    • (2005) FEMS Microbiol Rev , vol.29 , pp. 765-794
    • Sauer, U.1    Eikmanns, B.J.2
  • 46
    • 37849054223 scopus 로고    scopus 로고
    • Highway or byway: the metabolic role of the GABA shunt in plants.
    • 10.1016/j.tplants.2007.10.005, 18155636
    • Fait A, Fromm H, Walter D, Galili G, Fernie AR. Highway or byway: the metabolic role of the GABA shunt in plants. Trends Plant Sci 2008, 13:14-19. 10.1016/j.tplants.2007.10.005, 18155636.
    • (2008) Trends Plant Sci , vol.13 , pp. 14-19
    • Fait, A.1    Fromm, H.2    Walter, D.3    Galili, G.4    Fernie, A.R.5
  • 47
    • 33644771430 scopus 로고    scopus 로고
    • Pathways and regulation of bacterial arginine metabolism and perspectives for obtaining arginine overproducing strains.
    • 10.1007/s00253-005-0308-z, 16432742
    • Lu CD. Pathways and regulation of bacterial arginine metabolism and perspectives for obtaining arginine overproducing strains. Appl Microbiol Biotechnol 2006, 70:261-272. 10.1007/s00253-005-0308-z, 16432742.
    • (2006) Appl Microbiol Biotechnol , vol.70 , pp. 261-272
    • Lu, C.D.1
  • 48
    • 70349636598 scopus 로고    scopus 로고
    • Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns.
    • 10.1101/gr.090639.108, 2765277, 19541909
    • Kaleta C, de Figueiredo LF, Schuster S. Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns. Genome Res 2009, 19:1872-1883. 10.1101/gr.090639.108, 2765277, 19541909.
    • (2009) Genome Res , vol.19 , pp. 1872-1883
    • Kaleta, C.1    de Figueiredo, L.F.2    Schuster, S.3
  • 49
    • 49949089557 scopus 로고    scopus 로고
    • A critical examination of stoichiometric and path-finding approaches to metabolic pathways.
    • 10.1093/bib/bbn018, 18436574
    • Planes FJ, Beasley JE. A critical examination of stoichiometric and path-finding approaches to metabolic pathways. Brief Bioinform 2008, 9:422-436. 10.1093/bib/bbn018, 18436574.
    • (2008) Brief Bioinform , vol.9 , pp. 422-436
    • Planes, F.J.1    Beasley, J.E.2
  • 50
    • 0023799552 scopus 로고
    • Metabolism of L-fucose and L-rhamnose in Escherichia coli: aerobic-anaerobic regulation of L-lactaldehyde dissimilation.
    • 210658, 3275622
    • Baldoma L, Aguilar J. Metabolism of L-fucose and L-rhamnose in Escherichia coli: aerobic-anaerobic regulation of L-lactaldehyde dissimilation. J Bacteriol 1988, 170:416-421. 210658, 3275622.
    • (1988) J Bacteriol , vol.170 , pp. 416-421
    • Baldoma, L.1    Aguilar, J.2
  • 51
    • 0038495798 scopus 로고    scopus 로고
    • Fucose: biosynthesis and biological function in mammals.
    • 10.1093/glycob/cwg054, 12651883
    • Becker DJ, Lowe JB. Fucose: biosynthesis and biological function in mammals. Glycobiology 2003, 13:41R-53R. 10.1093/glycob/cwg054, 12651883.
    • (2003) Glycobiology , vol.13
    • Becker, D.J.1    Lowe, J.B.2
  • 54
    • 0034573011 scopus 로고    scopus 로고
    • Krebs and his trinity of cycles.
    • 10.1038/35043073, 11252898
    • Kornberg H. Krebs and his trinity of cycles. Nat Rev Mol Cell Biol 2000, 1:225-228. 10.1038/35043073, 11252898.
    • (2000) Nat Rev Mol Cell Biol , vol.1 , pp. 225-228
    • Kornberg, H.1
  • 55
    • 0014853092 scopus 로고
    • Pyrimidine metabolism in microorganisms.
    • 378357, 4919542
    • O'Donovan GA, Neuhard J. Pyrimidine metabolism in microorganisms. Bacteriol Rev 1970, 34:278-343. 378357, 4919542.
    • (1970) Bacteriol Rev , vol.34 , pp. 278-343
    • O'Donovan, G.A.1    Neuhard, J.2
  • 56
    • 0033797245 scopus 로고    scopus 로고
    • Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
    • 10.1128/JB.182.19.5332-5341.2000, 110974, 10986234
    • Xi H, Schneider BL, Reitzer L. Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage. J Bacteriol 2000, 182:5332-5341. 10.1128/JB.182.19.5332-5341.2000, 110974, 10986234.
    • (2000) J Bacteriol , vol.182 , pp. 5332-5341
    • Xi, H.1    Schneider, B.L.2    Reitzer, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.