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Volumn 67, Issue 9, 2001, Pages 4206-4214

DNA from Uncultured Organisms as a Source of 2,5-Diketo-D-Gluconic Acid Reductases

Author keywords

[No Author keywords available]

Indexed keywords

2,5 DIKETO D GLUCONATE 5 REDUCTASE; 2,5-DIKETO-D-GLUCONATE 5-REDUCTASE; ALDEHYDE REDUCTASE; BACTERIAL DNA; PRIMER DNA;

EID: 0035462106     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.67.9.4206-4214.2001     Document Type: Article
Times cited : (63)

References (41)
  • 2
    • 0022372833 scopus 로고
    • Production of 2-keto-I -gulonate, an intermediate in L-ascorbate synthesis, by a genetically modified Erwinia herbicola
    • Anderson, S., C. Marks, R. Lazarus, J. Miller, K. Stafford, J. Seymour, D. Light, W. Rastetter, and D. Estell. 1985. Production of 2-keto-I -gulonate, an intermediate in L-ascorbate synthesis, by a genetically modified Erwinia herbicola. Science 230:144-149.
    • (1985) Science , vol.230 , pp. 144-149
    • Anderson, S.1    Marks, C.2    Lazarus, R.3    Miller, J.4    Stafford, K.5    Seymour, J.6    Light, D.7    Rastetter, W.8    Estell, D.9
  • 5
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 6
    • 0030817782 scopus 로고    scopus 로고
    • Analysis of mer gene subclasses within bacterial communities in soils and sediments resolved by fluorescent-PCR-restriction fragment length polymorphism profiling
    • Bruce, K. 1997. Analysis of mer gene subclasses within bacterial communities in soils and sediments resolved by fluorescent-PCR-restriction fragment length polymorphism profiling. Appl. Environ. Microbiol. 63:4914-4919.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 4914-4919
    • Bruce, K.1
  • 7
    • 0642365399 scopus 로고
    • Synthesis of L-ascorbic acid
    • P. A. Seib and B. M. Tolbert (ed.), American Chemical Society, Washington, D.C.
    • Crawford, T. C. 1982. Synthesis of L-ascorbic acid, p. 1-36. In P. A. Seib and B. M. Tolbert (ed.), Ascorbic acid: chemistry, metabolism and uses. American Chemical Society, Washington, D.C.
    • (1982) Ascorbic Acid: Chemistry, Metabolism and Uses , pp. 1-36
    • Crawford, T.C.1
  • 9
    • 0022870839 scopus 로고
    • Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector
    • Fürste, J. P., W. Pansegrau, R. Frank, H. Blöcker, P. Scholz, M. Bagdasarian, and E. Lanka. 1986. Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector. Gene 48:119-131.
    • (1986) Gene , vol.48 , pp. 119-131
    • Fürste, J.P.1    Pansegrau, W.2    Frank, R.3    Blöcker, H.4    Scholz, P.5    Bagdasarian, M.6    Lanka, E.7
  • 10
    • 0023762137 scopus 로고
    • Conversion of glucose to 2-keto-L-gulonate, an intermediate in L-ascorbate synthesis, by a recombinant strain of Erwinia citreus
    • Grindley, J. F., M. A. Payton, H. van de Pol, and K. G. Hardy. 1988. Conversion of glucose to 2-keto-L-gulonate, an intermediate in L-ascorbate synthesis, by a recombinant strain of Erwinia citreus. Appl. Environ. Microbiol. 54:1770-1775.
    • (1988) Appl. Environ. Microbiol. , vol.54 , pp. 1770-1775
    • Grindley, J.F.1    Payton, M.A.2    Van De Pol, H.3    Hardy, K.G.4
  • 11
    • 0030032633 scopus 로고    scopus 로고
    • Isolation and identification of methanogen-specific DNA from blanket bog peat by PCR amplification and sequence analysis
    • Hales, B. A., C. Edwards, D. A. Ritchie, G. Hall, R. W. Pickup, and J. R. Saunders. 1996. Isolation and identification of methanogen-specific DNA from blanket bog peat by PCR amplification and sequence analysis. Appl. Environ. Microbiol. 62:668-675.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 668-675
    • Hales, B.A.1    Edwards, C.2    Ritchie, D.A.3    Hall, G.4    Pickup, R.W.5    Saunders, J.R.6
  • 12
    • 0032863699 scopus 로고    scopus 로고
    • Construction of environmental DNA libraries in Escherichia coli and screening for the presence of genes conferring utilization of 4-hydroxybutyrate
    • Henne, A., R. Daniel, R. A. Schmitz, and G. Gottschalk. 1999. Construction of environmental DNA libraries in Escherichia coli and screening for the presence of genes conferring utilization of 4-hydroxybutyrate. Appl. Environ. Microbiol. 65:3901-3907.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3901-3907
    • Henne, A.1    Daniel, R.2    Schmitz, R.A.3    Gottschalk, G.4
  • 13
    • 0027502979 scopus 로고
    • Polymerase chain reaction amplitication of naphthalene-catabolic and 16S rRNA gene sequences from indigenous sediment bacteria
    • Herrick, J. B., E. L. Madsen, C. A. Batt, and W. C. Ghiorse. 1993. Polymerase chain reaction amplitication of naphthalene-catabolic and 16S rRNA gene sequences from indigenous sediment bacteria. Appl. Environ. Microbiol. 59:687-694.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 687-694
    • Herrick, J.B.1    Madsen, E.L.2    Batt, C.A.3    Ghiorse, W.C.4
  • 15
    • 0032499712 scopus 로고    scopus 로고
    • Crystal structure of 2,5-diketo-D-gluconic acid reductase a complexed with NADPH at 2.1-Å resolution
    • Khurana, S., D. B. Powers, S. Anderson, and M. Blaber. 1998. Crystal structure of 2,5-diketo-D-gluconic acid reductase A complexed with NADPH at 2.1-Å resolution. Proc. Natl. Acad. Sci. USA 95:6768-6773.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6768-6773
    • Khurana, S.1    Powers, D.B.2    Anderson, S.3    Blaber, M.4
  • 16
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 17
    • 0034635134 scopus 로고    scopus 로고
    • Mutation of nicotinamide pocket residues in rat liver 3 alpha-hydroxysteroid dehydrogenase reveals different modes of cofactor binding
    • Ma, H., K. Ratnam, and T. M. Penning. 2000. Mutation of nicotinamide pocket residues in rat liver 3 alpha-hydroxysteroid dehydrogenase reveals different modes of cofactor binding. Biochemistry 39:102-109.
    • (2000) Biochemistry , vol.39 , pp. 102-109
    • Ma, H.1    Ratnam, K.2    Penning, T.M.3
  • 18
    • 0028873592 scopus 로고
    • Detection of methanotrophic bacteria in environmental samples with the PCR
    • McDonald, I. R., E. M. Kenna, and J. C. Murrell. 1995. Detection of methanotrophic bacteria in environmental samples with the PCR. Appl. Environ. Microbiol. 61:116-121.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 116-121
    • McDonald, I.R.1    Kenna, E.M.2    Murrell, J.C.3
  • 19
    • 0030900966 scopus 로고    scopus 로고
    • Detection and isolation of methanotrophic bacteria possessing soluble methane monooxygenase (sMMO) genes using the polymerase chain reaction (PCR)
    • Miguez, C. B., D. Bourque, J. A. Sealy, C. W. Greer, and D. Groleau. 1997. Detection and isolation of methanotrophic bacteria possessing soluble methane monooxygenase (sMMO) genes using the polymerase chain reaction (PCR). Microb. Ecol. 33:21-31.
    • (1997) Microb. Ecol. , vol.33 , pp. 21-31
    • Miguez, C.B.1    Bourque, D.2    Sealy, J.A.3    Greer, C.W.4    Groleau, D.5
  • 20
    • 0023645121 scopus 로고
    • Purification and characterization of 2.5-diketo-D-gluconate reductase from Corynebacterium sp
    • Miller, J. V., D. A. Estell, and R. A. Lazarus. 1987. Purification and characterization of 2.5-diketo-D-gluconate reductase from Corynebacterium sp. J. Biol. Chem. 262:9016-9020.
    • (1987) J. Biol. Chem. , vol.262 , pp. 9016-9020
    • Miller, J.V.1    Estell, D.A.2    Lazarus, R.A.3
  • 21
    • 0029681680 scopus 로고    scopus 로고
    • Biochemistry and molecular biology of ascorbic acid biosynthesis
    • Nishikimi, M., and K. Yagi. 1996. Biochemistry and molecular biology of ascorbic acid biosynthesis. Subcell. Biochem. 25:17-39.
    • (1996) Subcell. Biochem. , vol.25 , pp. 17-39
    • Nishikimi, M.1    Yagi, K.2
  • 22
    • 0032496652 scopus 로고    scopus 로고
    • PCR isolation of calcohol 2,3-dioxygenase gene fragments from environmental samples and their assembly into functional genes
    • Okuta, A., K. Ohnishi, and S. Harayama. 1998. PCR isolation of calcohol 2,3-dioxygenase gene fragments from environmental samples and their assembly into functional genes. Gene 212:221-228.
    • (1998) Gene , vol.212 , pp. 221-228
    • Okuta, A.1    Ohnishi, K.2    Harayama, S.3
  • 24
    • 0033564742 scopus 로고    scopus 로고
    • The arginine 276 anchor for NADP(H) dictates fluorescence kinetic transients in 3 alpha-hydroxysteroid dehydrogenase, a representative aldo-keto reductase
    • Ratnam, K., H. Ma, and T. M. Penning. 1999. The arginine 276 anchor for NADP(H) dictates fluorescence kinetic transients in 3 alpha-hydroxysteroid dehydrogenase, a representative aldo-keto reductase. Biochemistry 38:7856-7864.
    • (1999) Biochemistry , vol.38 , pp. 7856-7864
    • Ratnam, K.1    Ma, H.2    Penning, T.M.3
  • 25
    • 0030035418 scopus 로고    scopus 로고
    • A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome
    • Redenbach, M., H. M. Kieser, D. Denapaite, A. Eichner, J. Cullum, H. Kinashi, and D. A. Hopwood. 1996. A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome. Mol. Microbiol. 21:77-96.
    • (1996) Mol. Microbiol. , vol.21 , pp. 77-96
    • Redenbach, M.1    Kieser, H.M.2    Denapaite, D.3    Eichner, A.4    Cullum, J.5    Kinashi, H.6    Hopwood, D.A.7
  • 26
    • 84982339804 scopus 로고
    • Eine ergiebige Synthese der 1-Ascorbinsaure (C-vitamin)
    • Reichstein, T., and A. Grussner. 1934. Eine ergiebige Synthese der 1-Ascorbinsaure (C-vitamin). Helv. Chim. Acta 17:311-328.
    • (1934) Helv. Chim. Acta , vol.17 , pp. 311-328
    • Reichstein, T.1    Grussner, A.2
  • 27
    • 0031927989 scopus 로고    scopus 로고
    • Genetic diversity of nifH gene sequences in Paenibacillus azotofixans strains and soil samples analyzed by denaturing gradient gel electrophoresis of PCR-amplified gene fragments
    • Rosado, A. S., G. F. Duarte, L. Seldin, and J. D. Van Elsas. 1998. Genetic diversity of nifH gene sequences in Paenibacillus azotofixans strains and soil samples analyzed by denaturing gradient gel electrophoresis of PCR-amplified gene fragments. Appl. Environ. Microbiol. 64:2770-2779.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2770-2779
    • Rosado, A.S.1    Duarte, G.F.2    Seldin, L.3    Van Elsas, J.D.4
  • 29
    • 0027494113 scopus 로고
    • Restriction-site PCR: A direct method of unknown sequence retrieval adjacent to a known locus by using universal primers
    • Sarkar, G., R. T. Turner, and M. E. Rolander. 1993. Restriction-site PCR: a direct method of unknown sequence retrieval adjacent to a known locus by using universal primers. PCR Methods Appl. 2:318-322.
    • (1993) PCR Methods Appl. , vol.2 , pp. 318-322
    • Sarkar, G.1    Turner, R.T.2    Rolander, M.E.3
  • 30
    • 0031936948 scopus 로고    scopus 로고
    • Molecular evolution of the aldo-keto reductase gene superfamily
    • Seery, L. T., P. V. Nestor, and G. A. FitzGerald. 1998. Molecular evolution of the aldo-keto reductase gene superfamily. J. Mol. Evol. 46:139-146.
    • (1998) J. Mol. Evol. , vol.46 , pp. 139-146
    • Seery, L.T.1    Nestor, P.V.2    Fitzgerald, G.A.3
  • 31
    • 0025781097 scopus 로고
    • DNA recovery and direct detection of Tn5 sequences from soil
    • Selenska, S., and W. Klingmüller. 1991. DNA recovery and direct detection of Tn5 sequences from soil. Lett. Appl. Microbiol. 13:21-24.
    • (1991) Lett. Appl. Microbiol. , vol.13 , pp. 21-24
    • Selenska, S.1    Klingmüller, W.2
  • 32
    • 0030690924 scopus 로고    scopus 로고
    • A study of iterative type II polyketide synthases, using bacterial genes cloned from soil DNA: A means to access and use genes from uncultured microorganisms
    • Seow, K.-T., G. Meurer, M. Gerlitz, E. Werdt-Pienkowski, C. R. Hutchinson, and J. Davies. 1997. A study of iterative type II polyketide synthases, using bacterial genes cloned from soil DNA: a means to access and use genes from uncultured microorganisms. J. Bacteriol. 179:7360-7368.
    • (1997) J. Bacteriol. , vol.179 , pp. 7360-7368
    • Seow, K.-T.1    Meurer, G.2    Gerlitz, M.3    Werdt-Pienkowski, E.4    Hutchinson, C.R.5    Davies, J.6
  • 35
    • 0000171516 scopus 로고
    • Purification and properties of two 2,5-diketo-D-gluconate reductases from a mutant strain derived from Corynebacterium sp
    • Sonoyama, T., and K. Kobayashi. 1987. Purification and properties of two 2,5-diketo-D-gluconate reductases from a mutant strain derived from Corynebacterium sp. J. Ferment. Technol. 65:311-317.
    • (1987) J. Ferment. Technol. , vol.65 , pp. 311-317
    • Sonoyama, T.1    Kobayashi, K.2
  • 36
    • 0032977102 scopus 로고    scopus 로고
    • Methods for DNa extraction from various soils: A comparison
    • Tien, C. C., C. C. Chao, and W. L. Chao. 1999. Methods for DNA extraction from various soils: a comparison. J. Appl. Micrubiol. 86:937-943.
    • (1999) J. Appl. Micrubiol. , vol.86 , pp. 937-943
    • Tien, C.C.1    Chao, C.C.2    Chao, W.L.3
  • 37
    • 0034652347 scopus 로고    scopus 로고
    • Purification and characterization of NAD-dependent morphine 6-dehydrogenase from hamster liver cytosol, a new member of the aldo-keto reductase superfamily
    • Todaka, T., S. Yamano, and S. Toki. 2000. Purification and characterization of NAD-dependent morphine 6-dehydrogenase from hamster liver cytosol, a new member of the aldo-keto reductase superfamily. Arch. Biochem. Biophys. 374:189-197.
    • (2000) Arch. Biochem. Biophys. , vol.374 , pp. 189-197
    • Todaka, T.1    Yamano, S.2    Toki, S.3
  • 38
    • 0032574983 scopus 로고    scopus 로고
    • The biosynthetic pathway of vitamin C in higher plants
    • Wheeler, G. L., M. A. Jones, and N. Smirnoff. 1998. The biosynthetic pathway of vitamin C in higher plants. Nature 393:365-369.
    • (1998) Nature , vol.393 , pp. 365-369
    • Wheeler, G.L.1    Jones, M.A.2    Smirnoff, N.3
  • 39
    • 0027464941 scopus 로고
    • Nucleotide sequence and over-expression of morphine dehydrogenase, a plasmid-encoded gene from Pseudomonas putida M10
    • Willey, D. L., D. A. Caswell, C. R. Lowe, and N. C. Bruce. 1993. Nucleotide sequence and over-expression of morphine dehydrogenase, a plasmid-encoded gene from Pseudomonas putida M10. Biochem J. 290:539-544.
    • (1993) Biochem J. , vol.290 , pp. 539-544
    • Willey, D.L.1    Caswell, D.A.2    Lowe, C.R.3    Bruce, N.C.4
  • 40
    • 0031791394 scopus 로고    scopus 로고
    • The yiaE gene, located at 80.1 minutes on the Escherichia coli chromosome, encodes a 2-ketoaldonate reductase
    • Yum, D.-Y., B.-Y. Lee, D.-H. Hahm, and J.-G. Pan. 1998. The yiaE gene, located at 80.1 minutes on the Escherichia coli chromosome, encodes a 2-ketoaldonate reductase. J. Bacteriol. 180:5984-5988.
    • (1998) J. Bacteriol. , vol.180 , pp. 5984-5988
    • Yum, D.-Y.1    Lee, B.-Y.2    Hahm, D.-H.3    Pan, J.-G.4
  • 41
    • 0032807730 scopus 로고    scopus 로고
    • Identification of the yqhE and yafB genes encoding two 2,5-diketo-D-gluconate reductases in Escherichia coli
    • Yum, D.-Y., B.-Y. Lee, and J.-G. Pan. 1999. Identification of the yqhE and yafB genes encoding two 2,5-diketo-D-gluconate reductases in Escherichia coli. Appl. Environ. Microbiol. 65:3341-3346.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3341-3346
    • Yum, D.-Y.1    Lee, B.-Y.2    Pan, J.-G.3


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