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Volumn 7, Issue , 2011, Pages

Determinants of translation efficiency and accuracy

Author keywords

codon usage; translation accuracy; translation efficiency; tRNA

Indexed keywords

MESSENGER RNA; PROTEOME; TRANSCRIPTOME; TRANSFER RNA; AMINO ACID;

EID: 79954456859     PISSN: 17444292     EISSN: 17444292     Source Type: Journal    
DOI: 10.1038/msb.2011.14     Document Type: Review
Times cited : (361)

References (129)
  • 1
    • 0028220048 scopus 로고
    • Synonymous codon usage in Drosophila melanogaster: Natural selection and translational accuracy
    • Akashi H (1994) Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy. Genetics 136: 927-935 (Pubitemid 24085643)
    • (1994) Genetics , vol.136 , Issue.3 , pp. 927-935
    • Akashi, H.1
  • 2
    • 0025297285 scopus 로고
    • Codon preferences in free-living microorganisms
    • Andersson SG, Kurland CG (1990) Codon preferences in free-living microorganisms. Microbiol Rev 54: 198-210
    • (1990) Microbiol. Rev. , vol.54 , pp. 198-210
    • Andersson, S.G.1    Kurland, C.G.2
  • 4
    • 73149095830 scopus 로고    scopus 로고
    • Viral adaptation to host: A proteome-based analysis of codon usage and amino acid preferences
    • Bahir I, Fromer M, Prat Y, Linial M (2009) Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences. Mol Syst Biol 5: 311
    • (2009) Mol. Syst. Biol. , vol.5 , pp. 311
    • Bahir, I.1    Fromer, M.2    Prat, Y.3    Linial, M.4
  • 5
    • 34948860729 scopus 로고    scopus 로고
    • Causes for the intriguing presence of tRNAs in phages
    • DOI 10.1101/gr.6649807
    • Bailly-Bechet M, Vergassola M, Rocha E (2007) Causes for the intriguing presence of tRNAs in phages. Genome Res 17: 1486-1495 (Pubitemid 47529433)
    • (2007) Genome Research , vol.17 , Issue.10 , pp. 1486-1495
    • Bailly-Bechet, M.1    Vergassola, M.2    Rocha, E.3
  • 9
    • 0025941139 scopus 로고
    • The selection-mutation-drift theory of synonymouscodon usage
    • Bulmer M (1991) The selection-mutation-drift theory of synonymouscodon usage. Genetics 129: 897-907
    • (1991) Genetics , vol.129 , pp. 897-907
    • Bulmer, M.1
  • 11
    • 43149120657 scopus 로고    scopus 로고
    • Codon bias is a major factor explaining phage evolution in translationally biased hosts
    • Carbone A (2008) Codon bias is a major factor explaining phage evolution in translationally biased hosts. J Mol Evol 66: 210-223
    • (2008) J. Mol. Evol. , vol.66 , pp. 210-223
    • Carbone, A.1
  • 12
    • 31144465926 scopus 로고    scopus 로고
    • Hearing silence: Non-neutral evolution at synonymous sites in mammals
    • DOI 10.1038/nrg1770, PII NRG1770
    • Chamary JV, Parmley JL, Hurst LD (2006) Hearing silence: non-neutral evolution at synonymous sites in mammals. Nat Rev Genet 7: 98-108 (Pubitemid 43128905)
    • (2006) Nature Reviews Genetics , vol.7 , Issue.2 , pp. 98-108
    • Chamary, J.V.1    Parmley, J.L.2    Hurst, L.D.3
  • 13
    • 3843068862 scopus 로고    scopus 로고
    • Selective and mutational patterns associated with gene expression in humans: Influences on synonymous composition and intron presence
    • DOI 10.1534/genetics.104.026351
    • Comeron JM (2004) Selective and mutational patterns associated with gene expression in humans: influences on synonymous composition and intron presence. Genetics 167: 1293-1304 (Pubitemid 39045637)
    • (2004) Genetics , vol.167 , Issue.3 , pp. 1293-1304
    • Comeron, J.M.1
  • 15
    • 0013936167 scopus 로고
    • Codon-anticodon pairing: The wobble hypothesis
    • Crick FH (1966) Codon-anticodon pairing: the wobble hypothesis. J Mol Biol 19: 548-555
    • (1966) J. Mol. Biol. , vol.19 , pp. 548-555
    • Crick, F.H.1
  • 16
    • 0028079904 scopus 로고
    • The folding of the bifunctional TRP3 protein in yeast is influenced by a translational pause which lies in a region of structural divergence with Escherichia coli indoleglycerol-phosphate synthase
    • DOI 10.1111/j.1432-1033.1994.tb20093.x
    • Crombie T, Boyle JP, Coggins JR, Brown AJ (1994) The folding of thebifunctional TRP3 protein in yeast is influenced by a translational pause which lies in a region of structural divergence with Escherichia coli indoleglycerol-phosphate synthase. Eur J Biochem 226: 657-664 (Pubitemid 24379087)
    • (1994) European Journal of Biochemistry , vol.226 , Issue.2 , pp. 657-664
    • Crombie, T.1    Boyle, J.P.2    Coggins, J.R.3    Brown, J.P.4
  • 17
    • 0026459383 scopus 로고
    • Protein folding within the cell is influenced by controlled rates of polypeptide elongation
    • Crombie T, Swaffield JC, Brown AJ (1992) Protein folding within the cell is influenced by controlled rates of polypeptide elongation. J Mol Biol 228: 7-12
    • (1992) J. Mol. Biol. , vol.228 , pp. 7-12
    • Crombie, T.1    Swaffield, J.C.2    Brown, A.J.3
  • 19
    • 0028103746 scopus 로고
    • Translational initiation on structured messengers another role for the shine-dalgarno interaction
    • De Smit MH, van Duin J (1994) Translational initiation on structured messengers. Another role for the Shine-Dalgarno interaction. J Mol Biol 235: 173-184
    • (1994) J. Mol. Biol. , vol.235 , pp. 173-184
    • De Smit, M.H.1    Van Duin, J.2
  • 21
    • 23144432213 scopus 로고    scopus 로고
    • Optimality and evolutionary tuning of the expression level of a protein
    • DOI 10.1038/nature03842
    • Dekel E, Alon U (2005) Optimality and evolutionary tuning of the expression level of a protein. Nature 436: 588-592 (Pubitemid 41112935)
    • (2005) Nature , vol.436 , Issue.7050 , pp. 588-592
    • Dekel, E.1    Alon, U.2
  • 22
    • 33846021292 scopus 로고    scopus 로고
    • Tissue-specific differences in human transfer RNA expression
    • Dittmar KA, Goodenbour JM, Pan T (2006) Tissue-specific differences in human transfer RNA expression. PLoS Genet 2: e221
    • (2006) PLoS Genet. , vol.2
    • Dittmar, K.A.1    Goodenbour, J.M.2    Pan, T.3
  • 23
    • 1442302294 scopus 로고    scopus 로고
    • Exploring the Regulation of tRNA Distribution on the Genomic Scale
    • DOI 10.1016/j.jmb.2004.01.024
    • Dittmar KA, Mobley EM, Radek AJ, Pan T (2004) Exploring the regulation of tRNA distribution on the genomic scale. J Mol Biol 337: 31-47 (Pubitemid 38270246)
    • (2004) Journal of Molecular Biology , vol.337 , Issue.1 , pp. 31-47
    • Dittmar, K.A.1    Mobley, E.M.2    Radek, A.J.3    Pan, T.4
  • 24
    • 0030564828 scopus 로고    scopus 로고
    • Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates
    • DOI 10.1006/jmbi.1996.0428
    • Dong H, Nilsson L, Kurland CG (1996) Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates. J Mol Biol 260: 649-663 (Pubitemid 26270960)
    • (1996) Journal of Molecular Biology , vol.260 , Issue.5 , pp. 649-663
    • Dong, H.1    Nilsson, L.2    Kurland, C.G.3
  • 25
    • 4644280499 scopus 로고    scopus 로고
    • Solving the riddle of codon usage preferences: A test for translational selection
    • DOI 10.1093/nar/gkh834
    • Dos Reis M, Savva R, Wernisch L (2004) Solving the riddle of codon usage preferences: a test for translational selection. Nucleic Acids Res 32: 5036-5044 (Pubitemid 39445490)
    • (2004) Nucleic Acids Research , vol.32 , Issue.17 , pp. 5036-5044
    • Dos Reis, M.1    Savva, R.2    Wernisch, L.3
  • 26
    • 58449121403 scopus 로고    scopus 로고
    • Estimating translational selection in eukaryotic genomes
    • Dos Reis M, Wernisch L (2009) Estimating translational selection in eukaryotic genomes. Mol Biol Evol 26: 451-461
    • (2009) Mol. Biol. Evol. , vol.26 , pp. 451-461
    • Dos Reis, M.1    Wernisch, L.2
  • 27
    • 47549097539 scopus 로고    scopus 로고
    • Mistranslation-Induced Protein Misfolding as a Dominant Constraint on Coding-Sequence Evolution
    • DOI 10.1016/j.cell.2008.05.042, PII S0092867408007058
    • Drummond DA, Wilke CO (2008) Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution. Cell 134: 341-352 (Pubitemid 352010328)
    • (2008) Cell , vol.134 , Issue.2 , pp. 341-352
    • Drummond, D.A.1    Wilke, C.O.2
  • 28
    • 0034237669 scopus 로고    scopus 로고
    • tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes
    • DOI 10.1016/S0168-9525(00)02041-2, PII S0168952500020412
    • Duret L (2000) tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes. Trends Genet 16: 287-289 (Pubitemid 30389593)
    • (2000) Trends in Genetics , vol.16 , Issue.7 , pp. 287-289
    • Duret, L.1
  • 30
    • 0038179369 scopus 로고    scopus 로고
    • Selective charging of tRNA isoacceptors explains patterns of codon usage
    • DOI 10.1126/science.1083811
    • Elf J, Nilsson D, Tenson T, Ehrenberg M (2003) Selective charging of tRNA isoacceptors explains patterns of codon usage. Science 300: 1718-1722 (Pubitemid 36712562)
    • (2003) Science , vol.300 , Issue.5626 , pp. 1718-1722
    • Elf, J.1    Nilsson, D.2    Tenson, T.3    Ehrenberg, M.4
  • 31
    • 0343665638 scopus 로고    scopus 로고
    • How translational accuracy influences reading frame maintenance
    • Farabaugh PJ, Bjork GR (1999) How translational accuracy influences reading frame maintenance. EMBO J 18: 1427-1434 (Pubitemid 29127057)
    • (1999) EMBO Journal , vol.18 , Issue.6 , pp. 1427-1434
    • Farabaugh, P.J.1    Bjork, G.R.2
  • 32
    • 0026038913 scopus 로고
    • The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency
    • Gallie DR (1991) The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency. Genes Dev 5: 2108-2116 (Pubitemid 21905902)
    • (1991) Genes and Development , vol.5 , Issue.11 , pp. 2108-2116
    • Gallie, D.R.1
  • 33
    • 71549158509 scopus 로고    scopus 로고
    • Measuring and detecting molecular adaptation in codon usage against nonsense errors during protein translation
    • Gilchrist MA, Shah P, Zaretzki R (2009) Measuring and detecting molecular adaptation in codon usage against nonsense errors during protein translation. Genetics 183: 1493-1505
    • (2009) Genetics , vol.183 , pp. 1493-1505
    • Gilchrist, M.A.1    Shah, P.2    Zaretzki, R.3
  • 34
    • 0020491327 scopus 로고
    • Codon usage in bacteria: Correlation with gene expressivity
    • Gouy M, Gautier C (1982) Codon usage in bacteria: correlation with gene expressivity. Nucleic Acids Res 10: 7055-7074
    • (1982) Nucleic Acids Res. , vol.10 , pp. 7055-7074
    • Gouy, M.1    Gautier, C.2
  • 35
    • 45949103617 scopus 로고
    • Codon catalog usage is a genome strategy modulated for gene expressivity
    • Grantham R, Gautier C, Gouy M, Jacobzone M, Mercier R (1981) Codon catalog usage is a genome strategy modulated for gene expressivity. Nucleic Acids Res 9: r43-r74 (Pubitemid 11128643)
    • (1981) Nucleic Acids Research , vol.9 , Issue.1
    • Grantham, R.1    Gautier, C.2    Gouy, M.3
  • 36
    • 33745109363 scopus 로고    scopus 로고
    • Protein misfolding disorders: Pathogenesis and intervention
    • DOI 10.1007/s10545-006-0301-4
    • Gregersen N (2006) Protein misfolding disorders: pathogenesis and intervention. J Inherit Metab Dis 29: 456-470 (Pubitemid 43880651)
    • (2006) Journal of Inherited Metabolic Disease , vol.29 , Issue.2-3 , pp. 456-470
    • Gregersen, N.1
  • 37
    • 57149116929 scopus 로고    scopus 로고
    • Tight regulation of unstructured proteins: From transcript synthesis to protein degradation
    • DOI 10.1126/science.1163581
    • Gsponer J, Futschik ME, Teichmann SA, Babu MM (2008) Tight regulation of unstructured proteins: from transcript synthesis to protein degradation. Science 322: 1365-1368 (Pubitemid 352775246)
    • (2008) Science , vol.322 , Issue.5906 , pp. 1365-1368
    • Gsponer, J.1    Futschik, M.E.2    Teichmann, S.A.3    Babu, M.M.4
  • 38
    • 77649198142 scopus 로고    scopus 로고
    • A universal trend of reduced mRNA stability near the translation- initiation site in prokaryotes and eukaryotes
    • Gu W, Zhou T, Wilke CO (2010) A universal trend of reduced mRNA stability near the translation-initiation site in prokaryotes and eukaryotes. PLoS Comput Biol 6: e1000664
    • (2010) PLoS Comput. Biol. , vol.6
    • Gu, W.1    Zhou, T.2    Wilke, C.O.3
  • 39
    • 0023663451 scopus 로고
    • Compilation and comparison of the sequence context around the AUG startcodons in saccharomyces cerevisiae mRNAs
    • Hamilton R, Watanabe CK, de Boer HA (1987) Compilation and comparison of the sequence context around the AUG startcodons in Saccharomyces cerevisiae mRNAs. Nucleic Acids Res 15: 3581-3593
    • (1987) Nucleic. Acids. Res. , vol.15 , pp. 3581-3593
    • Hamilton, R.1    Watanabe, C.K.2    De Boer, H.A.3
  • 40
    • 7344229253 scopus 로고    scopus 로고
    • Towards a theory of evolutionary adaptation
    • Hartl DL, Taubes CH (1998) Towards a theory of evolutionary adaptation. Genetica 102-103: 525-533 (Pubitemid 28371738)
    • (1998) Genetica , vol.102-103 , pp. 525-533
    • Hard, D.L.1    Taubes, C.H.2
  • 41
    • 37249045872 scopus 로고    scopus 로고
    • Variable strength of translational selection among 12 Drosophila species
    • DOI 10.1534/genetics.107.070466
    • Heger A, Ponting CP (2007) Variable strength of translational selection among 12 Drosophila species. Genetics 177: 1337-1348 (Pubitemid 350277036)
    • (2007) Genetics , vol.177 , Issue.3 , pp. 1337-1348
    • Heger, A.1    Ponting, C.P.2
  • 43
    • 77749268307 scopus 로고    scopus 로고
    • Experimentally increased codon bias in the drosophila Adh gene leads to an increase in larval but not adult alcohol dehydrogenase activity
    • HenseW, Anderson N, Hutter S, StephanW, Parsch J, Carlini DB (2010)Experimentally increased codon bias in the Drosophila Adh gene leads to an increase in larval, but not adult, alcohol dehydrogenase activity. Genetics 184: 547-555
    • (2010) Genetics , vol.184 , pp. 547-555
    • HenseW. Anderson, N.1    Hutter, S.2    Stephan, W.3    Parsch, J.4    Carlini, D.B.5
  • 44
    • 73349100056 scopus 로고    scopus 로고
    • Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage
    • Huang Y, Koonin EV, Lipman DJ, Przytycka TM (2009) Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage. Nucleic Acids Res 37: 6799-6810
    • (2009) Nucleic Acids Res. , vol.37 , pp. 6799-6810
    • Huang, Y.1    Koonin, E.V.2    Lipman, D.J.3    Przytycka, T.M.4
  • 45
    • 0033782994 scopus 로고    scopus 로고
    • Aminoacyl-tRNA synthesis
    • Ibba M, Soll D (2000) Aminoacyl-tRNA synthesis. Annu Rev Biochem 69: 617-650
    • (2000) Annu. Rev. Biochem. , vol.69 , pp. 617-650
    • Ibba, M.1    Soll, D.2
  • 46
    • 0019824131 scopus 로고
    • Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system
    • Ikemura T (1981) Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in itsprotein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system. J Mol Biol 151: 389-409 (Pubitemid 12252691)
    • (1981) Journal of Molecular Biology , vol.151 , Issue.3 , pp. 389-409
    • Ikemura, T.1
  • 47
    • 0021958933 scopus 로고
    • Codon usage and tRNA content in unicellular and multicellular organisms
    • Ikemura T (1985) Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol 2: 13-34 (Pubitemid 15152046)
    • (1985) Molecular Biology and Evolution , vol.2 , Issue.1 , pp. 13-34
    • Ikemura, T.1
  • 48
    • 0020262659 scopus 로고
    • Codon usage and transfer RNA contents: Organism-specific codon-choice patterns in reference to the isoacceptor contents
    • Ikemura T, Ozeki H (1983) Codon usage and transfer RNA contents: organism-specific codon-choice patterns in reference to the isoacceptor contents. Cold Spring Harb Symp Quant Biol 47 (Part 2): 1087-1097 (Pubitemid 13071257)
    • (1982) Cold Spring Harbor Symposia on Quantitative Biology , vol.47 , Issue.2 , pp. 1087-1097
    • Ikemura, T.1    Ozeki, H.2
  • 49
    • 62549134121 scopus 로고    scopus 로고
    • Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
    • Ingolia NT, Ghaemmaghami S, Newman JR, Weissman JS (2009) Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Science 324: 218-223
    • (2009) Science , vol.324 , pp. 218-223
    • Ingolia, N.T.1    Ghaemmaghami, S.2    Newman, J.R.3    Weissman, J.S.4
  • 50
    • 75149196287 scopus 로고    scopus 로고
    • The mechanism of eukaryotic translation initiation and principles of its regulation
    • Jackson RJ, Hellen CU, Pestova TV (2010) The mechanism of eukaryotic translation initiation and principles of its regulation. Nat Rev Mol Cell Biol 11: 113-127
    • (2010) Nat. Rev. Mol. Cell Biol. , vol.11 , pp. 113-127
    • Jackson, R.J.1    Hellen, C.U.2    Pestova, T.V.3
  • 51
    • 0023372380 scopus 로고
    • A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins
    • USA
    • Jacob WF, Santer M, Dahlberg AE (1987) A single base change in the Shine-Dalgarno region of 16S rRNA of Escherichia coli affects translation of many proteins. Proc Natl Acad Sci USA 84: 4757-4761
    • (1987) Proc. Natl. Acad. Sci. , vol.84 , pp. 4757-4761
    • Jacob, W.F.1    Santer, M.2    Dahlberg, A.E.3
  • 52
    • 25844513164 scopus 로고    scopus 로고
    • The relationship among gene expression, folding free energy and codon usage bias in Escherichia coli
    • DOI 10.1016/j.febslet.2005.08.059, PII S0014579305010719
    • Jia M, Li Y (2005) The relationship among gene expression, folding free energy and codon usage bias in Escherichia coli. FEBS Lett 579: 5333-5337 (Pubitemid 41395152)
    • (2005) FEBS Letters , vol.579 , Issue.24 , pp. 5333-5337
    • Jia, M.1    Li, Y.2
  • 53
    • 50649085041 scopus 로고    scopus 로고
    • Relaxation of yeast mitochondrial functions after whole-genome duplication
    • Jiang H, Guan W, Pinney D, Wang W, Gu Z (2008) Relaxation of yeast mitochondrial functions after whole-genome duplication. Genome Res 18: 1466-1471
    • (2008) Genome. Res. , vol.18 , pp. 1466-1471
    • Jiang, H.1    Guan, W.2    Pinney, D.3    Wang, W.4    Gu, Z.5
  • 54
    • 11844281461 scopus 로고    scopus 로고
    • Mammalian poly(A)-binding protein is a eukaryotic translation initiation factor, which acts via multiple mechanisms
    • DOI 10.1101/gad.1262905
    • Kahvejian A, Svitkin YV, Sukarieh R, M'Boutchou MN, Sonenberg N (2005) Mammalian poly(A)-binding protein is a eukaryotic translation initiation factor, which acts via multiple mechanisms. Genes Dev 19: 104-113 (Pubitemid 40095820)
    • (2005) Genes and Development , vol.19 , Issue.1 , pp. 104-113
    • Kahvejian, A.1    Svitkin, Y.V.2    Sukarieh, R.3    M'Boutchou, M.-N.4    Sonenberg, N.5
  • 56
    • 0034821884 scopus 로고    scopus 로고
    • Codon usage and tRNA genes in eukaryotes: Correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis
    • DOI 10.1007/s002390010219
    • Kanaya S, Yamada Y, Kinouchi M, Kudo Y, Ikemura T (2001) Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis. J Mol Evol 53: 290-298 (Pubitemid 32889537)
    • (2001) Journal of Molecular Evolution , vol.53 , Issue.4-5 , pp. 290-298
    • Kanaya, S.1    Yamada, Y.2    Kinouchi, M.3    Kudo, Y.4    Ikemura, T.5
  • 57
    • 0032882170 scopus 로고    scopus 로고
    • Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: Gene expression level and species-specific diversity of codon usage based on multivariate analysis
    • DOI 10.1016/S0378-1119(99)00225-5, PII S0378111999002255
    • Kanaya S, Yamada Y, Kudo Y, Ikemura T (1999) Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis. Gene 238: 143-155 (Pubitemid 29436104)
    • (1999) Gene , vol.238 , Issue.1 , pp. 143-155
    • Kanaya, S.1    Yamada, Y.2    Kudo, Y.3    Ikemura, T.4
  • 59
    • 0032699491 scopus 로고    scopus 로고
    • Synonymous codon substitutions affect ribosome traffic and protein folding during in vitro translation
    • Komar AA, Lesnik T, Reiss C (1999) Synonymous codon substitutions affect ribosome traffic and protein folding during in vitro translation. FEBS Lett 462: 387-391
    • (1999) FEBS Lett. , vol.462 , pp. 387-391
    • Komar, A.A.1    Lesnik, T.2    Reiss, C.3
  • 61
    • 0022552131 scopus 로고
    • Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes
    • Kozak M (1986) Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44: 283-292 (Pubitemid 16048214)
    • (1986) Cell , vol.44 , Issue.2 , pp. 283-292
    • Kozak, M.1
  • 62
    • 0037121050 scopus 로고    scopus 로고
    • Pushing the limits of the scanning mechanism for initiation of translation
    • DOI 10.1016/S0378-1119(02)01056-9, PII S0378111902010569
    • Kozak M (2002) Pushing the limits of the scanning mechanism for initiation of translation. Gene 299: 1-34 (Pubitemid 35379825)
    • (2002) Gene , vol.299 , Issue.1-2 , pp. 1-34
    • Kozak, M.1
  • 63
    • 27144555357 scopus 로고    scopus 로고
    • Regulation of translation via mRNA structure in prokaryotes and eukaryotes
    • DOI 10.1016/j.gene.2005.06.037, PII S0378111905004348
    • Kozak M (2005) Regulation of translation via mRNA structure in prokaryotes and eukaryotes. Gene 361: 13-37 (Pubitemid 41506931)
    • (2005) Gene , vol.361 , Issue.1-2 , pp. 13-37
    • Kozak, M.1
  • 64
    • 64849114915 scopus 로고    scopus 로고
    • Coding-sequence determinants of gene expression in escherichia coli
    • Kudla G, Murray AW, Tollervey D, Plotkin JB (2009) Coding-sequence determinants of gene expression in Escherichia coli. Science 324: 255-258
    • (2009) Science , vol.324 , pp. 255-258
    • Kudla, G.1    Murray, A.W.2    Tollervey, D.3    Plotkin, J.B.4
  • 65
    • 34047245826 scopus 로고    scopus 로고
    • A network of multiple regulatory layers shapes gene expression in fission yeast
    • DOI 10.1016/j.molcel.2007.03.002, PII S1097276507001475
    • Lackner DH, Beilharz TH, Marguerat S, Mata J, Watt S, Schubert F, Preiss T, Bahler J (2007) A network of multiple regulatory layers shapes gene expression in fission yeast. Mol Cell 26: 145-155 (Pubitemid 46550937)
    • (2007) Molecular Cell , vol.26 , Issue.1 , pp. 145-155
    • Lackner, D.H.1    Beilharz, T.H.2    Marguerat, S.3    Mata, J.4    Watt, S.5    Schubert, F.6    Preiss, T.7    Bahler, J.8
  • 67
    • 13444291526 scopus 로고    scopus 로고
    • Codon bias as a factor in regulating expression via translation rate in the human genome
    • DOI 10.1016/j.gene.2004.11.035
    • Lavner Y, Kotlar D (2005) Codon bias as a factor in regulating expression via translation rate in the human genome. Gene 345: 127-138 (Pubitemid 40208509)
    • (2005) Gene , vol.345 , Issue.1 SPEC. ISS. , pp. 127-138
    • Lavner, Y.1    Kotlar, D.2
  • 68
  • 69
    • 0348013051 scopus 로고    scopus 로고
    • Hierarchy of sequence-dependent features associated with prokaryotic translation
    • DOI 10.1101/gr.1485203
    • Lithwick G, Margalit H (2003) Hierarchy of sequence-dependent features associated with prokaryotic translation. Genome Res 13: 2665-2673 (Pubitemid 37541155)
    • (2003) Genome Research , vol.13 , Issue.12 , pp. 2665-2673
    • Lithwick, G.1    Margalit, H.2
  • 70
    • 77749322692 scopus 로고    scopus 로고
    • Structural and mechanistic insights into translation termination
    • Loh PG, Song H (2010) Structural and mechanistic insights into translation termination. Curr Opin Struct Biol 20: 98-103
    • (2010) Curr. Opin. Struct. Biol. , vol.20 , pp. 98-103
    • Loh, P.G.1    Song, H.2
  • 71
    • 31544442938 scopus 로고    scopus 로고
    • Radiation-induced changes in gene expression involve recruitment of existing messenger RNAs to and away from polysomes
    • DOI 10.1158/0008-5472.CAN-05-3459
    • Lu X, de la Pena L, Barker C, Camphausen K, Tofilon PJ (2006) Radiation-induced changes in gene expression involve recruitment of existing messenger RNAs to and away from polysomes. Cancer Res 66: 1052-1061 (Pubitemid 43165973)
    • (2006) Cancer Research , vol.66 , Issue.2 , pp. 1052-1061
    • Lu, X.1    De La Pena, L.2    Barker, C.3    Camphausen, K.4    Tofilon, P.J.5
  • 73
    • 33847305359 scopus 로고    scopus 로고
    • Differential translation efficiency of orthologous genes is involved in phenotypic divergence of yeast species
    • DOI 10.1038/ng1967, PII NG1967
    • Man O, Pilpel Y (2007) Differential translation efficiency of orthologous genes is involved in phenotypic divergence of yeast species. Nat Genet 39: 415-421 (Pubitemid 46328488)
    • (2007) Nature Genetics , vol.39 , Issue.3 , pp. 415-421
    • Man, O.1    Pilpel, Y.2
  • 74
    • 77954918654 scopus 로고    scopus 로고
    • Visualizing high error levels during gene expression in living bacterial cells
    • USA
    • Meyerovich M, Mamou G, Ben-Yehuda S (2010) Visualizing high error levels during gene expression in living bacterial cells. Proc Natl Acad Sci USA 107: 11543-11548
    • (2010) Proc. Natl. Acad. Sci. , vol.107 , pp. 11543-11548
    • Meyerovich, M.1    Mamou, G.2    Ben-Yehuda, S.3
  • 75
    • 0030731696 scopus 로고    scopus 로고
    • Codon usage bias and tRNA abundance in Drosophila
    • DOI 10.1007/PL00006256
    • Moriyama EN, Powell JR (1997) Codon usage bias and tRNA abundance in Drosophila. J Mol Evol 45: 514-523 (Pubitemid 27461026)
    • (1997) Journal of Molecular Evolution , vol.45 , Issue.5 , pp. 514-523
    • Moriyama, E.N.1    Powell, J.R.2
  • 76
    • 45549088326 scopus 로고    scopus 로고
    • The transcriptional landscape of the yeast genome defined by RNA sequencing
    • DOI 10.1126/science.1158441
    • Nagalakshmi U,Wang Z,Waern K, Shou C, Raha D, Gerstein M, Snyder M (2008) The transcriptional landscape of the yeast genome defined by RNA sequencing. Science 320: 1344-1349 (Pubitemid 351929471)
    • (2008) Science , vol.320 , Issue.5881 , pp. 1344-1349
    • Nagalakshmi, U.1    Wang, Z.2    Waern, K.3    Shou, C.4    Raha, D.5    Gerstein, M.6    Snyder, M.7
  • 77
    • 79952308837 scopus 로고    scopus 로고
    • The role of codon selection in regulation of translation efficiency deduced from synthetic libraries
    • Navon S, Pilpel Y (2011) The role of codon selection in regulation of translation efficiency deduced from synthetic libraries. Genome Biol 12: R12
    • (2011) Genome. Biol. , vol.12
    • Navon, S.1    Pilpel, Y.2
  • 79
    • 33845790070 scopus 로고    scopus 로고
    • Correlation of mRNA expression and protein abundance affected by multiple sequence features related to translational efficiency in Desulfovibrio vulgaris: A quantitative analysis
    • DOI 10.1534/genetics.106.065862
    • Nie L, Wu G, Zhang W (2006) Correlation of mRNA expression and protein abundance affected by multiple sequence features related to translational efficiency in Desulfovibrio vulgaris: a quantitative analysis. Genetics 174: 2229-2243 (Pubitemid 46011608)
    • (2006) Genetics , vol.174 , Issue.4 , pp. 2229-2243
    • Nie, L.1    Wu, G.2    Zhang, W.3
  • 80
    • 0028960181 scopus 로고
    • Coevolution of RNA helix stability and Shine-Dalgarno complementarity in a translational start region
    • Olsthoorn RC, Zoog S, van Duin J (1995) Coevolution of RNA helix stability and Shine-Dalgarno complementarity in a translational start region. Mol Microbiol 15: 333-339
    • (1995) Mol. Microbiol. , vol.15 , pp. 333-339
    • Olsthoorn, R.C.1    Zoog, S.2    Van Duin, J.3
  • 81
    • 0021731777 scopus 로고
    • Escherichia coli ribosomes translate in vivo with variable rate
    • Pedersen S (1984) Escherichia coli ribosomes translate in vivo with variable rate. EMBO J 3: 2895-2898
    • (1984) EMBO J. , vol.3 , pp. 2895-2898
    • Pedersen, S.1
  • 82
    • 17444449538 scopus 로고    scopus 로고
    • Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae
    • DOI 10.1006/jmbi.1997.0942
    • Percudani R, Pavesi A, Ottonello S (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268: 322-330 (Pubitemid 27208057)
    • (1997) Journal of Molecular Biology , vol.268 , Issue.2 , pp. 322-330
    • Percudani, R.1    Pavesi, A.2    Ottonello, S.3
  • 83
    • 0023655732 scopus 로고
    • Missense misreading of asparagine codons as a function of codon identity and context
    • Precup J, Parker J (1987) Missense misreading of asparagine codons as a function of codon identity and context. J Biol Chem 262: 11351-11355
    • (1987) J. Biol. Chem. , vol.262 , pp. 11351-11355
    • Precup, J.1    Parker, J.2
  • 84
    • 77955955750 scopus 로고    scopus 로고
    • The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria
    • RanW, Higgs PG (2010) The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria. Mol Biol Evol 27: 2129-2140
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 2129-2140
    • Ran, W.1    Higgs, P.G.2
  • 85
    • 77958493102 scopus 로고    scopus 로고
    • The mRNA landscape at yeast translation initiation sites
    • Robbins-Pianka A, Rice MD, Weir MP (2010) The mRNA landscape at yeast translation initiation sites. Bioinformatics 26: 2651-2655
    • (2010) Bioinformatics , vol.26 , pp. 2651-2655
    • Robbins-Pianka, A.1    Rice, M.D.2    Weir, M.P.3
  • 86
    • 0034923932 scopus 로고    scopus 로고
    • Fidelity of aminoacyl-tRNA selection on the ribosome: Kinetic and structural mechanisms
    • DOI 10.1146/annurev.biochem.70.1.415
    • Rodnina MV, Wintermeyer W (2001) Fidelity of aminoacyl-tRNA selection on the ribosome: kinetic and structural mechanisms. Annu Rev Biochem 70: 415-435 (Pubitemid 32662216)
    • (2001) Annual Review of Biochemistry , vol.70 , pp. 415-435
    • Rodnina, M.V.1    Wintermeyer, W.2
  • 87
    • 0024344770 scopus 로고
    • The role of bases upstream of the Shine-Dalgarno region and in the coding sequence in the control of gene expression in Escherichia coli: Translation and stability of mRNAs in vivo
    • DOI 10.1016/0378-1119(89)90314-4
    • Schauder B, McCarthy JE (1989) The role of bases upstream of the Shine-Dalgarno region and in the coding sequence in the control of gene expression in Escherichia coli: translation and stability of mRNAs in vivo. Gene 78: 59-72 (Pubitemid 19157887)
    • (1989) Gene , vol.78 , Issue.1 , pp. 59-72
    • Schauder, B.1    McCarthy, J.E.G.2
  • 89
    • 0023046211 scopus 로고
    • Codon usage in regulatory genes in escherichia coli does not reflect selection for rare codons
    • Sharp PM, Li WH (1986) Codon usage in regulatory genes in Escherichia coli does not reflect selection for 'rare' codons. Nucleic Acids Res 14: 7737-7749
    • (1986) Nucleic. Acids. Res. , vol.14 , pp. 7737-7749
    • Sharp, P.M.1    Li, W.H.2
  • 90
    • 0023650543 scopus 로고
    • The codon Adaptation Index-a measure of directional synonymous codon usage bias and its potential applications
    • Sharp PM, Li WH (1987) The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15: 1281-1295
    • (1987) Nucleic Acids Res. , vol.15 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 91
    • 0021679725 scopus 로고
    • Selection pressures on codon usage in the complete genome of bacteriophage T7
    • DOI 10.1007/BF02100089
    • Sharp PM, Rogers MS, McConnell DJ (1984) Selection pressures on codon usage in the complete genome of bacteriophage T7. J Mol Evol 21: 150-160 (Pubitemid 15106843)
    • (1984) Journal of Molecular Evolution , vol.21 , Issue.2 , pp. 150-160
    • Sharp, P.M.1    Rogers, M.S.2    McConnell, D.J.3
  • 92
    • 0024116811 scopus 로고
    • Silent sites in drosophila genes are not neutral: Evidence of selection among synonymous codons
    • Shields DC, Sharp PM, Higgins DG, Wright F (1988) 'Silent' sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. Mol Biol Evol 5: 704-716
    • (1988) Mol. Biol. Evol. , vol.5 , pp. 704-716
    • Shields, D.C.1    Sharp, P.M.2    Higgins, D.G.3    Wright, F.4
  • 93
    • 0016154301 scopus 로고
    • The 30-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites
    • USA
    • Shine J, Dalgarno L (1974) The 30-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci USA 71: 1342-1346
    • (1974) Proc. Natl. Acad. Sci. , vol.71 , pp. 1342-1346
    • Shine, J.1    Dalgarno, L.2
  • 94
    • 0035970285 scopus 로고    scopus 로고
    • Charging levels of four tRNA species in escherichia coli Rel+ and Rel strains during amino acid starvation: A simple model for the effect of ppGpp on translational accuracy
    • Sorensen MA (2001) Charging levels of four tRNA species in Escherichia coli Rel(+) and Rel(-) strains during amino acid starvation: a simple model for the effect of ppGpp on translational accuracy. J Mol Biol 307: 785-798
    • (2001) J. Mol. Biol. , vol.307 , pp. 785-798
    • Sorensen, M.A.1
  • 95
    • 0024405193 scopus 로고
    • Codon usage determines translation rate in Escherichia coli
    • DOI 10.1016/0022-2836(89)90260-X
    • Sorensen MA, Kurland CG, Pedersen S (1989) Codon usage determines translation rate in Escherichia coli. J Mol Biol 207: 365-377 (Pubitemid 19155241)
    • (1989) Journal of Molecular Biology , vol.207 , Issue.2 , pp. 365-377
    • Sorensen, M.A.1    Kurland, C.G.2    Pedersen, S.3
  • 96
    • 78649375395 scopus 로고    scopus 로고
    • Translational regulation of gene expression during conditions of cell stress
    • Spriggs KA, Bushell M, Willis AE (2010) Translational regulation of gene expression during conditions of cell stress. Mol Cell 40: 228-237
    • (2010) Mol. Cell , vol.40 , pp. 228-237
    • Spriggs, K.A.1    Bushell, M.2    Willis, A.E.3
  • 98
    • 0344944630 scopus 로고    scopus 로고
    • Protein aggregation and aggregate toxicity: New insights into protein folding, misfolding diseases and biological evolution
    • DOI 10.1007/s00109-003-0464-5
    • Stefani M, Dobson CM (2003) Protein aggregation and aggregate toxicity: new insights into protein folding, misfolding diseases and biological evolution. J Mol Med 81: 678-699 (Pubitemid 37491594)
    • (2003) Journal of Molecular Medicine , vol.81 , Issue.11 , pp. 678-699
    • Stefani, M.1    Dobson, C.M.2
  • 99
    • 0011343769 scopus 로고
    • How ribosomes select initiator regions in mRNA: Base pair formation between the 30 terminus of 16S rRNA and the mRNA during initiation of protein synthesis in escherichia coli
    • USA
    • Steitz JA, Jakes K (1975) How ribosomes select initiator regions in mRNA: base pair formation between the 30 terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli. Proc Natl Acad Sci USA 72: 4734-4738
    • (1975) Proc. Natl. Acad. Sci. , vol.72 , pp. 4734-4738
    • Steitz, J.A.1    Jakes, K.2
  • 100
    • 0028359705 scopus 로고
    • Codon usage in Caenorhabditis elegans: Delineation of translational selection and mutational biases
    • Stenico M, Lloyd AT, Sharp PM (1994) Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases. Nucleic Acids Res 22: 2437-2446 (Pubitemid 24222417)
    • (1994) Nucleic Acids Research , vol.22 , Issue.13 , pp. 2437-2446
    • Stenico, M.1    Lloyd, A.T.2    Sharp, P.M.3
  • 101
    • 45149128433 scopus 로고    scopus 로고
    • The cost of expression of escherichia coli lac operon proteins is in the process, not in the products
    • Stoebel DM, Dean AM, Dykhuizen DE (2008) The cost of expression of Escherichia coli lac operon proteins is in the process, not in the products. Genetics 178: 1653-1660
    • (2008) Genetics , vol.178 , pp. 1653-1660
    • Stoebel, D.M.1    Dean, A.M.2    Dykhuizen, D.E.3
  • 102
    • 33846786904 scopus 로고    scopus 로고
    • Synonymous codon usage in Escherichia coli: Selection for translational accuracy
    • DOI 10.1093/molbev/msl166
    • Stoletzki N, Eyre-Walker A (2007) Synonymous codon usage in Escherichia coli: selection for translational accuracy. Mol Biol Evol 24: 374-381 (Pubitemid 46204370)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.2 , pp. 374-381
    • Stoletzki, N.1    Eyre-Walker, A.2
  • 103
    • 26244459242 scopus 로고    scopus 로고
    • Regulation of p53 translation and induction after DNA damage by ribosomal protein L26 and nucleolin
    • DOI 10.1016/j.cell.2005.07.034, PII S0092867405008147
    • Takagi M, Absalon MJ, McLure KG, Kastan MB (2005) Regulation of p53 translation and induction after DNA damage by ribosomal protein L26 and nucleolin. Cell 123: 49-63 (Pubitemid 41414528)
    • (2005) Cell , vol.123 , Issue.1 , pp. 49-63
    • Takagi, M.1    Absalon, M.J.2    McLure, K.G.3    Kastan, M.B.4
  • 104
    • 12644303224 scopus 로고    scopus 로고
    • Association of the yeast poly(A) tail binding protein with translation initiation factor eIF-4G
    • Tarun Jr SZ, Sachs AB (1996) Association of the yeast poly(A) tail binding protein with translation initiation factor eIF-4G. EMBO J 15: 7168-7177 (Pubitemid 27023287)
    • (1996) EMBO Journal , vol.15 , Issue.24 , pp. 7168-7177
    • Tarun Jr., S.Z.1    Sachs, A.B.2
  • 105
    • 0029908504 scopus 로고    scopus 로고
    • Protein secondary structural types are differentially coded on messenger RNA
    • Thanaraj TA, Argos P (1996a) Protein secondary structural types are differentially coded on messenger RNA. Protein Sci 5: 1973-1983 (Pubitemid 26347732)
    • (1996) Protein Science , vol.5 , Issue.10 , pp. 1973-1983
    • Thanaraj, T.A.1    Argos, P.2
  • 106
    • 0030018101 scopus 로고    scopus 로고
    • Ribosome-mediated translational pause and protein domain organization
    • Thanaraj TA, Argos P (1996b) Ribosome-mediated translational pause and protein domain organization. Protein Sci 5: 1594-1612 (Pubitemid 26257223)
    • (1996) Protein Science , vol.5 , Issue.8 , pp. 1594-1612
    • Thanaraj, T.A.1    Argos, P.2
  • 107
    • 34248674895 scopus 로고    scopus 로고
    • The Stability Effects of Protein Mutations Appear to be Universally Distributed
    • DOI 10.1016/j.jmb.2007.03.069, PII S0022283607004342
    • Tokuriki N, Stricher F, Schymkowitz J, Serrano L, Tawfik DS (2007) The stability effects of protein mutations appear to be universally distributed. J Mol Biol 369: 1318-1332 (Pubitemid 46770766)
    • (2007) Journal of Molecular Biology , vol.369 , Issue.5 , pp. 1318-1332
    • Tokuriki, N.1    Stricher, F.2    Schymkowitz, J.3    Serrano, L.4    Tawfik, D.S.5
  • 111
    • 77649245858 scopus 로고    scopus 로고
    • Translation efficiency is determined by both codon bias and folding energy
    • USA
    • Tuller T, Waldman YY, Kupiec M, Ruppin E (2010b) Translation efficiency is determined by both codon bias and folding energy. Proc Natl Acad Sci USA 107: 3645-3650
    • (2010) Proc. Natl. Acad. Sci. , vol.107 , pp. 3645-3650
    • Tuller, T.1    Waldman, Y.Y.2    Kupiec, M.3    Ruppin, E.4
  • 112
    • 0034669882 scopus 로고    scopus 로고
    • Why are natively unfolded proteins unstructured under physiologic conditions
    • Uversky VN, Gillespie JR, Fink AL (2000)Why are 'natively unfolded' proteins unstructured under physiologic conditions? Proteins 41: 415-427
    • (2000) Proteins , vol.41 , pp. 415-427
    • Uversky, V.N.1    Gillespie, J.R.2    Fink, A.L.3
  • 113
    • 0021764898 scopus 로고
    • Translation is a nonuniform process effect of tRNA availability on the rate of elongation of nascent polypeptide chains
    • Varenne S, Buc J, Lloubes R, Lazdunski C (1984) Translation is a nonuniform process. Effect of tRNA availability on the rate of elongation of nascent polypeptide chains. J Mol Biol 180: 549-576
    • (1984) J. Mol. Biol. , vol.180 , pp. 549-576
    • Varenne, S.1    Buc, J.2    Lloubes, R.3    Lazdunski, C.4
  • 115
    • 0035107115 scopus 로고    scopus 로고
    • Role of mRNA secondary structure in translational repression of the maize transcriptional activator Lc
    • DOI 10.1104/pp.125.3.1380
    • Wang L, Wessler SR (2001) Role of mRNA secondary structure in translational repression of the maize transcriptional activator Lc(1,2). Plant Physiol 125: 1380-1387 (Pubitemid 32224626)
    • (2001) Plant Physiology , vol.125 , Issue.3 , pp. 1380-1387
    • Wang, L.1    Wessler, S.R.2
  • 116
    • 76149095944 scopus 로고    scopus 로고
    • GroEL dependency affects codon usage- support for a critical role of misfolding in gene evolution
    • Warnecke T, Hurst LD (2010) GroEL dependency affects codon usage- support for a critical role of misfolding in gene evolution. Mol Syst Biol 6: 340
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 340
    • Warnecke, T.1    Hurst, L.D.2
  • 117
    • 70349333474 scopus 로고    scopus 로고
    • Why there is more to protein evolution than protein function: Splicing nucleosomes and dualcoding sequence
    • Warnecke T, Weber CC, Hurst LD (2009) Why there is more to protein evolution than protein function: splicing, nucleosomes and dualcoding sequence. Biochem Soc Trans 37: 756-761
    • (2009) Biochem. Soc. Trans. , vol.37 , pp. 756-761
    • Warnecke, T.1    Weber, C.C.2    Hurst, L.D.3
  • 120
    • 0023666521 scopus 로고
    • Acylation of proteins with myristic acid occurs cotranslationally
    • Wilcox C, Hu JS, Olson EN (1987) Acylation of proteins with myristic acid occurs cotranslationally. Science 238: 1275-1278
    • (1987) Science , vol.238 , pp. 1275-1278
    • Wilcox, C.1    Hu, J.S.2    Olson, E.N.3
  • 121
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • DOI 10.1016/0378-1119(90)90491-9
    • Wright F (1990) The 'effective number of codons' used in a gene. Gene 87: 23-29 (Pubitemid 20139850)
    • (1990) Gene , vol.87 , Issue.1 , pp. 23-29
    • Wright, F.1
  • 122
    • 44149088787 scopus 로고    scopus 로고
    • Integrative analyses of posttranscriptional regulation in the yeast saccharomyces cerevisiae using transcriptomic and proteomic data
    • Wu G, Nie L, Zhang W (2008) Integrative analyses of posttranscriptional regulation in the yeast Saccharomyces cerevisiae using transcriptomic and proteomic data. Curr Microbiol 57: 18-22
    • (2008) Curr. Microbiol. , vol.57 , pp. 18-22
    • Wu, G.1    Nie, L.2    Zhang, W.3
  • 123
    • 77958577844 scopus 로고    scopus 로고
    • Impact of translational errorinduced and error-free misfolding on the rate of protein evolution
    • Yang JR, Zhuang SM, Zhang J (2010) Impact of translational errorinduced and error-free misfolding on the rate of protein evolution. Mol Syst Biol 6: 421
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 421
    • Yang, J.R.1    Zhuang, S.M.2    Zhang, J.3
  • 124
    • 0019426060 scopus 로고
    • Attenuation in the control of expression of bacterial operons
    • DOI 10.1038/289751a0
    • Yanofsky C (1981) Attenuation in the control of expression of bacterial operons. Nature 289: 751-758 (Pubitemid 11150411)
    • (1981) Nature , vol.289 , Issue.5800 , pp. 751-758
    • Yanofsky, C.1
  • 126
    • 77956663124 scopus 로고    scopus 로고
    • Differential arginylation of actin isoforms is regulated by coding sequencedependent degradation
    • Zhang F, Saha S, Shabalina SA, Kashina A (2010) Differential arginylation of actin isoforms is regulated by coding sequencedependent degradation. Science 329: 1534-1537
    • (2010) Science , vol.329 , pp. 1534-1537
    • Zhang, F.1    Saha, S.2    Shabalina, S.A.3    Kashina, A.4
  • 127
    • 62049083910 scopus 로고    scopus 로고
    • Transient ribosomal attenuation coordinates protein synthesis and co-translational folding
    • Zhang G, Hubalewska M, Ignatova Z (2009) Transient ribosomal attenuation coordinates protein synthesis and co-translational folding. Nat Struct Mol Biol 16: 274-280
    • (2009) Nat. Struct. Mol. Biol. , vol.16 , pp. 274-280
    • Zhang, G.1    Hubalewska, M.2    Ignatova, Z.3
  • 128
    • 0026010217 scopus 로고
    • Low-usage codons in escherichia coli yeast fruit fly and primates
    • Zhang SP, Zubay G, Goldman E (1991) Low-usage codons in Escherichia coli, yeast, fruit fly and primates. Gene 105: 61-72
    • (1991) Gene , vol.105 , pp. 61-72
    • Zhang, S.P.1    Zubay, G.2    Goldman, E.3
  • 129
    • 67649356943 scopus 로고    scopus 로고
    • Translationally optimal codons associate with structurally sensitive sites in proteins
    • Zhou T, Weems M, Wilke CO (2009) Translationally optimal codons associate with structurally sensitive sites in proteins. Mol Biol Evol 26: 1571-1580
    • (2009) Mol. Biol. Evol. , vol.26 , pp. 1571-1580
    • Zhou, T.1    Weems, M.2    Wilke, C.O.3


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