Interaction identification of Zif268 and TATAZF proteins with GC-/AT-rich DNA sequence: A theoretical study

Journal of Computational Chemistry

Volumn 32, Issue 3, 2011, Pages 416-428

  Yang, Bo ^a   Zhu, Yanyan ^a   Wang, Yan ^a   Chen, Guangju ^a  

^a BEIJING NORMAL UNIVERSITY   (China)

Author keywords

free energy calculations; MM PBSA; molecular dynamics simulation; protein DNA binding; TATAZF; Zif268

Indexed keywords

FREE-ENERGY CALCULATIONS; MM-PBSA; MOLECULAR DYNAMICS SIMULATION; PROTEIN-DNA BINDING; TATAZF; ZIF268;

BINDING ENERGY; BIOCHEMISTRY; COMPLEXATION; DNA; FREE ENERGY; HYDROGEN; HYDROGEN BONDS; MOLECULAR DYNAMICS; MOLECULAR MECHANICS; PROTEINS; ZINC;

DNA SEQUENCES;

DNA; EARLY GROWTH RESPONSE FACTOR 1; EGR1 PROTEIN, MOUSE; ZINC FINGER PROTEIN;

ANIMAL; ARTICLE; BINDING SITE; CHEMICAL PHENOMENA; CHEMISTRY; METABOLISM; MOLECULAR DYNAMICS; MOUSE; PROTEIN BINDING; TATA BOX; THERMODYNAMICS;

ANIMALS; BINDING SITES; DNA; EARLY GROWTH RESPONSE PROTEIN 1; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; MICE; MOLECULAR DYNAMICS SIMULATION; PROTEIN BINDING; TATA BOX; THERMODYNAMICS; ZINC FINGERS;

EID: 78650474100     PISSN: 01928651     EISSN: 1096987X     Source Type: Journal    
DOI: 10.1002/jcc.21630     Document Type: Article

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