메뉴 건너뛰기




Volumn 60, Issue 11, 2010, Pages 2572-2576

Bacteroides faecis sp. nov., isolated from human faeces

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CATALASE; FATTY ACID; OXIDOREDUCTASE; RNA 16S;

EID: 78649308644     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.020024-0     Document Type: Article
Times cited : (17)

References (46)
  • 1
    • 54049098781 scopus 로고    scopus 로고
    • Laboratory maintenance and cultivation of bacteroides species
    • Unit 13C.1
    • Bacic, M. K. & Smith, C. J. (2008). Laboratory maintenance and cultivation of bacteroides species. Curr Protoc Microbiol 13, Unit 13C.1.
    • (2008) Curr Protoc Microbiol , vol.13
    • Bacic, M.K.1    Smith, C.J.2
  • 2
    • 0242384034 scopus 로고    scopus 로고
    • Review and re-analysis of domain-specific 16S primers
    • Baker, G. C., Smith, J. J. & Cowan, D. A. (2003). Review and re-analysis of domain-specific 16S primers. J Microbiol Methods 55, 541-555.
    • (2003) J Microbiol Methods , vol.55 , pp. 541-555
    • Baker, G.C.1    Smith, J.J.2    Cowan, D.A.3
  • 6
    • 0025899392 scopus 로고
    • Multivariate analyses of fatty acid data from whole-cell methanolysates of Prevotella, Bacteroides and Porphyromonas spp
    • Brondz, I., Olsen, I., Haapasalo, M. & Van Winkelhoff, A. J. (1991). Multivariate analyses of fatty acid data from whole-cell methanolysates of Prevotella, Bacteroides and Porphyromonas spp. J Gen Microbiol 137, 1445-1452.
    • (1991) J Gen Microbiol , vol.137 , pp. 1445-1452
    • Brondz, I.1    Olsen, I.2    Haapasalo, M.3    Van Winkelhoff, A.J.4
  • 7
    • 47249142417 scopus 로고    scopus 로고
    • Bacteroides xylanisolvens sp. nov., a xylan-degrading bacterium isolated from human faeces
    • Chassard, C., Delmas, E., Lawson, P. A. & Bernalier-Donadille, A. (2008). Bacteroides xylanisolvens sp. nov., a xylan-degrading bacterium isolated from human faeces. Int J Syst Evol Microbiol 58, 1008-1013.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1008-1013
    • Chassard, C.1    Delmas, E.2    Lawson, P.A.3    Bernalier-Donadille, A.4
  • 8
    • 0031892290 scopus 로고    scopus 로고
    • Design and evaluation of a 16S rRNA-Targeted oligonucleotide probe for specific detection and quantitation of human faecal Bacteroides populations
    • Dore, J., Sghir, A., Hannequart-Gramet, G., Corthier, G. & Pochart, P. (1998). Design and evaluation of a 16S rRNA-targeted oligonucleotide probe for specific detection and quantitation of human faecal Bacteroides populations. Syst Appl Microbiol 21, 65-71. (Pubitemid 28172092)
    • (1998) Systematic and Applied Microbiology , vol.21 , Issue.1 , pp. 65-71
    • Dore, J.1    Schir, A.2    Hannequart-Gramet, G.3    Corthier, G.4    Pochart, P.5
  • 10
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229. (Pubitemid 19175038)
    • (1989) International Journal of Systematic Bacteriology , vol.39 , Issue.3 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 11
    • 64749099436 scopus 로고    scopus 로고
    • Coculture fermentations of Bifidobacterium species and Bacteroides thetaiotaomicron reveal a mechanistic insight into the prebiotic effect of inulintype fructans
    • Falony, G., Calmeyn, T., Leroy, F. & De Vuyst, L. (2009). Coculture fermentations of Bifidobacterium species and Bacteroides thetaiotaomicron reveal a mechanistic insight into the prebiotic effect of inulintype fructans. Appl Environ Microbiol 75, 2312-2319.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 2312-2319
    • Falony, G.1    Calmeyn, T.2    Leroy, F.3    De Vuyst, L.4
  • 12
    • 84927068687 scopus 로고    scopus 로고
    • The significance of prokaryote diversity in the human gastrointestinal tract
    • Edited by N. A. Logan. H. M. Lappin-Scott & P. C. F. Oyston. Cambridge: Cambridge University Press
    • Flint, H. J. (2006). The significance of prokaryote diversity in the human gastrointestinal tract. In Prokaryotic Diversity: Mechanisms and Significance (Society for General Microbiology Symposium no. 66), pp. 65-90. Edited by N. A. Logan. H. M. Lappin-Scott & P. C. F. Oyston. Cambridge: Cambridge University Press.
    • (2006) Prokaryotic Diversity: Mechanisms and Significance (Society for General Microbiology Symposium No. 66) , pp. 65-90
    • Flint, H.J.1
  • 14
    • 0027085819 scopus 로고
    • A partial phylogenetic analysis of the 'flavobacter-bacteroides' phylum: Basis for taxonomic restructuring
    • Gherna, R. & Woese, C. R. (1992). A partial phylogenetic analysis of the 'flavobacter-bacteroides' phylum: basis for taxonomic restructuring. Syst Appl Microbiol 15, 513-521.
    • (1992) Syst Appl Microbiol , vol.15 , pp. 513-521
    • Gherna, R.1    Woese, C.R.2
  • 16
    • 0036862191 scopus 로고    scopus 로고
    • A fluorometric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature
    • Gonzalez, J. M. & Saiz-Jimenez, C. (2002). A fluorometric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature. Environ Microbiol 4, 770-773.
    • (2002) Environ Microbiol , vol.4 , pp. 770-773
    • Gonzalez, J.M.1    Saiz-Jimenez, C.2
  • 17
    • 65249119418 scopus 로고    scopus 로고
    • The human intestinal microbiome: A new frontier of human biology
    • Hattori, M. & Taylor, T. D. (2009). The human intestinal microbiome: a new frontier of human biology. DNA Res 16, 1-12.
    • (2009) DNA Res , vol.16 , pp. 1-12
    • Hattori, M.1    Taylor, T.D.2
  • 18
    • 0042471955 scopus 로고    scopus 로고
    • Molecular analysis of fecal microbiota in elderly individuals using 16S rDNA library and T-RFLP
    • Hayashi, H., Sakamoto, M., Kitahara, M. & Benno, Y. (2003). Molecular analysis of fecal microbiota in elderly individuals using 16S rDNA library and T-RFLP. Microbiol Immunol 47, 557-570. (Pubitemid 37010383)
    • (2003) Microbiology and Immunology , vol.47 , Issue.8 , pp. 557-570
    • Hayashi, H.1    Sakamoto, M.2    Kitahara, M.3    Benno, Y.4
  • 20
    • 33744826789 scopus 로고    scopus 로고
    • Anaerobes: Antibiotic resistance, clinical significance, and the role of susceptibility testing
    • DOI 10.1016/j.anaerobe.2005.10.004, PII S1075996405001319
    • Hecht, D. W. (2006). Anaerobes: Antibiotic resistance, clinical significance, and the role of susceptibility testing. Anaerobe 12, 115-121. (Pubitemid 43831678)
    • (2006) Anaerobe , vol.12 , Issue.3 , pp. 115-121
    • Hecht, D.W.1
  • 21
    • 0029808923 scopus 로고    scopus 로고
    • Improved immobilization of DNA to microwell plates for DNA-DNA hybridization
    • DOI 10.1093/nar/24.20.4098
    • Hirayama, H., Tamaoka, J. & Horikoshi, K. (1996). Improved immobilization of DNA to microwell plates for DNA-DNA hybridization. Nucleic Acids Res 24, 4098-4099. (Pubitemid 26385349)
    • (1996) Nucleic Acids Research , vol.24 , Issue.20 , pp. 4098-4099
    • Hirayama, H.1    Tamaoka, J.2    Horikoshi, K.3
  • 22
    • 0022977307 scopus 로고
    • Bacteroides caccae sp. nov., Bacteroides merdae sp. nov., and Bacteroides stercoris sp. nov. isolated from human feces
    • Johnson, J. L., Moore, W. E. C. & Moore, L. V. H. (1986). Bacteroides caccae sp. nov., Bacteroides merdae sp. nov., and Bacteroides stercoris sp. nov. isolated from human feces. Int J Syst Bacteriol 36, 499-501.
    • (1986) Int J Syst Bacteriol , vol.36 , pp. 499-501
    • Johnson, J.L.1    Moore, W.E.C.2    Moore, L.V.H.3
  • 24
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • Kluge, A. G. & Farris, J. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
    • (1969) Syst Zool , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, J.S.2
  • 26
    • 62649122287 scopus 로고    scopus 로고
    • Molecular diversity of Bacteroides spp. in human fecal microbiota as determined by group-specific 16S rRNA gene clone library analysis
    • Li, M., Zhou, H., Hua, W., Wang, B., Wang, S., Zhao, G., Li, L., Zhao, L. & Pang, X. (2009). Molecular diversity of Bacteroides spp. in human fecal microbiota as determined by group-specific 16S rRNA gene clone library analysis. Syst Appl Microbiol 32, 193-200.
    • (2009) Syst Appl Microbiol , vol.32 , pp. 193-200
    • Li, M.1    Zhou, H.2    Hua, W.3    Wang, B.4    Wang, S.5    Zhao, G.6    Li, L.7    Zhao, L.8    Pang, X.9
  • 27
    • 0345869650 scopus 로고    scopus 로고
    • Quantitative PCR with 16S rRNA-Gene-Targeted Species-Specific Primers for Analysis of Human Intestinal Bifidobacteria
    • DOI 10.1128/AEM.70.1.167-173.2004
    • Matsuki, T., Watanabe, K., Fujimoto, J., Kado, Y., Takada, T., Matsumoto, K. & Tanaka, R. (2004). Quantitative PCR with 16S rRNA-gene-targeted species-specific primers for analysis of human intestinal bifidobacteria. Appl Environ Microbiol 70, 167-173. (Pubitemid 38090201)
    • (2004) Applied and Environmental Microbiology , vol.70 , Issue.1 , pp. 167-173
    • Matsuki, T.1    Watanabe, K.2    Fujimoto, J.3    Kado, Y.4    Takada, T.5    Matsumoto, K.6    Tanaka, R.7
  • 28
    • 0020056285 scopus 로고
    • Identification of Bacteroides species by cellular fatty acid profiles
    • Mayberry, W. R., Lambe, D. W., Jr & Ferguson, K. P. (1982). Identification of Bacteroides species by cellular fatty acid profiles. Int J Syst Bacteriol 32, 21-27.
    • (1982) Int J Syst Bacteriol , vol.32 , pp. 21-27
    • Mayberry, W.R.1    Lambe Jr., D.W.2    Ferguson, K.P.3
  • 31
    • 0028118435 scopus 로고
    • Phylogeny of Bacteroides, Prevotella, and Porphyromonas spp. and related bacteria
    • Paster, B. J., Dewhirst, F. E., Olsen, I. & Fraser, G. J. (1994). Phylogeny of Bacteroides, Prevotella, and Porphyromonas spp. and related bacteria. J Bacteriol 176, 725-732. (Pubitemid 24043962)
    • (1994) Journal of Bacteriology , vol.176 , Issue.3 , pp. 725-732
    • Paster, B.J.1    Dewhirst, F.E.2    Olsen, I.3    Fraser, G.J.4
  • 32
    • 0037366989 scopus 로고    scopus 로고
    • Enumeration of Bacteroides species in human faeces by fluorescent in situ hybridisation combined with flow cytometry using 16S rRNA probes
    • DOI 10.1078/072320203322337399
    • Rigottier-Gois, L., Rochet, V., Garrec, N., Suau, A. & Dore, J. (2003). Enumeration of Bacteroides species in human faeces by fluorescent in situ hybridisation combined with flow cytometry using 16S rRNA probes. Syst Appl Microbiol 26, 110-118. (Pubitemid 36514252)
    • (2003) Systematic and Applied Microbiology , vol.26 , Issue.1 , pp. 110-118
    • Rigottier-Gois, L.1    Rochet, V.2    Garrec, N.3    Suau, A.4    Dore, J.5
  • 34
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 35
    • 0007660665 scopus 로고
    • Fermentation of polysaccharides by human colonic anaerobes
    • Edited by C. Cherbut, J. L. Barry, D. Lairon & M. Durand. Paris, John Libbey Eurotext
    • Salyers, A. A. (1995). Fermentation of polysaccharides by human colonic anaerobes. In Dietary Fibre: Mechanisms of Action in Human Physiology and Metabolism, pp. 29-35. Edited by C. Cherbut, J. L. Barry, D. Lairon & M. Durand. Paris, John Libbey Eurotext.
    • (1995) Dietary Fibre: Mechanisms of Action in Human Physiology and Metabolism , pp. 29-35
    • Salyers, A.A.1
  • 36
    • 0141810217 scopus 로고
    • Identification of bacteria by gas chromatography of cellular fatty acids
    • Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20, 16.
    • (1990) USFCC Newsl , vol.20 , pp. 16
    • Sasser, M.1
  • 37
    • 0000240137 scopus 로고
    • The genus Bacteroides and related taxa
    • 2nd edn, Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer
    • Shah, H. N. (1992). The genus Bacteroides and related taxa. In The Prokaryotes, 2nd edn, pp. 3593-3607. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. New York: Springer.
    • (1992) The Prokaryotes , pp. 3593-3607
    • Shah, H.N.1
  • 38
    • 36849044887 scopus 로고    scopus 로고
    • The medically important Bacteroides spp. in health and disease
    • 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • Smith, C. J., Rocha, E. R. & Paster, B. J. (2006). The medically important Bacteroides spp. in health and disease. In The Prokaryotes: a Handbook on the Biology of Bacteria, 3rd edn, vol. 7, pp. 381-427. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes: A Handbook on the Biology of Bacteria , vol.7 , pp. 381-427
    • Smith, C.J.1    Rocha, E.R.2    Paster, B.J.3
  • 39
    • 10844247842 scopus 로고    scopus 로고
    • 'Bacteroides nordii' sp. nov. and 'Bacteroides salyersae' sp. nov. isolated from clinical specimens of human intestinal origin
    • DOI 10.1128/JCM.42.12.5565-5570.2004
    • Song, Y. L., Liu, C. X., McTeague, M. & Finegold, S. M. (2004). 'Bacteroides nordii' sp. nov. and 'Bacteroides salyersae' sp. nov. isolated from clinical specimens of human intestinal origin. J Clin Microbiol 42, 5565-5570. (Pubitemid 39664337)
    • (2004) Journal of Clinical Microbiology , vol.42 , Issue.12 , pp. 5565-5570
    • Song, Y.L.1    Liu, C.X.2    McTeague, M.3    Finegold, S.M.4
  • 40
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599. (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 41
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • DOI 10.1093/nar/25.24.4876
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882. (Pubitemid 28022245)
    • (1997) Nucleic Acids Research , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 43
    • 33845874101 scopus 로고    scopus 로고
    • An obesity-associated gut microbiome with increased capacity for energy harvest
    • DOI 10.1038/nature05414, PII NATURE05414
    • Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R. & Gordon, J. I. (2006). An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444, 1027-1031. (Pubitemid 46018515)
    • (2006) Nature , vol.444 , Issue.7122 , pp. 1027-1031
    • Turnbaugh, P.J.1    Ley, R.E.2    Mahowald, M.A.3    Magrini, V.4    Mardis, E.R.5    Gordon, J.I.6
  • 44
    • 33144472155 scopus 로고    scopus 로고
    • In vitro kinetic analysis of oligofructose consumption by Bacteroides and Bifidobacterium spp. indicates different degradation mechanisms
    • Van der Meulen, R. D., Makras, L., Verbrugghe, K., Adriany, T. & De Vuyst, L. (2006). In vitro kinetic analysis of oligofructose consumption by Bacteroides and Bifidobacterium spp. indicates different degradation mechanisms. Appl Environ Microbiol 72, 1006-1012.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1006-1012
    • Van Der Meulen, R.D.1    Makras, L.2    Verbrugghe, K.3    Adriany, T.4    De Vuyst, L.5
  • 45
    • 24944540682 scopus 로고    scopus 로고
    • Comparison of bacterial diversity along the human intestinal tract by direct cloning and sequencing of 16S rRNA genes
    • DOI 10.1016/j.femsec.2005.03.012, PII S0168649605000942
    • Wang, M., Ahrne, S., Jeppsson, B. & Molin, G. (2005). Comparison of bacterial diversity along the human intestinal tract by direct cloning and sequencing of 16S rRNA genes. FEMS Microbiol Ecol 54, 219-231. (Pubitemid 41317922)
    • (2005) FEMS Microbiology Ecology , vol.54 , Issue.2 , pp. 219-231
    • Wang, M.1    Ahrne, S.2    Jeppsson, B.3    Molin, G.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.