Obesity alters gut microbial ecology

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 31, 2005, Pages 11070-11075

  Ley, Ruth E ^a   Bäckhed, Fredrik ^a   Turnbaugh, Peter ^a   Lozupone, Catherine A ^b   Knight, Robin D ^b   Gordon, Jeffrey I ^a  

^a WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF COLORADO   (United States)

Author keywords

Energy balance obesity; Host microbial interactions; Intestinal bacterial diversity; ob ob mice; Phylogenetics

Indexed keywords

RIBOSOME RNA; RNA 16S;

ANIMAL EXPERIMENT; ARTICLE; DIETARY INTAKE; ECOLOGY; ENERGY BALANCE; INTESTINE FLORA; MICROBIAL DIVERSITY; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; OBESITY; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; UNINDEXED SEQUENCE;

ANIMALS; BACTERIA; BASE SEQUENCE; CYANOBACTERIA; DNA; ECOSYSTEM; FEMALE; GENES, BACTERIAL; HUMANS; INTESTINES; MICE; MICE, INBRED C57BL; MICE, OBESE; MOLECULAR SEQUENCE DATA; OBESITY; PREGNANCY; RNA, RIBOSOMAL, 16S;

ANIMALIA; BACTEROIDETES; FIRMICUTES;

EID: 23344442120     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0504978102     Document Type: Article

References (27)

1. Bäckhed, F., Ley, R. E., Sonnenburg, J. L., Peterson, D. A. & Gordon, J. I. (2005) Science 307, 1915-1920.
2. Sonnenburg, J. L., Xu, J., Leip, D. D., Chen, C. H., Westover, B. P., Weatherford, J., Buhler, J. D. & Gordon, J. I. (2005) Science 307, 1955-1959.
3. Xu, J., Bjursell, M. K., Himrod, J., Deng, S., Carmichael, L. K., Chiang, H. C., Hooper, L. V. & Gordon, J. I. (2003) Science 299, 2074-2076.
4. Bäckhed, F., Ding, H., Wang, T., Hooper, L. V., Koh, G. Y., Nagy, A., Semenkovich, C. F. & Gordon, J. I. (2004) Proc. Natl. Acad. Sci. USA 101, 15718-15723.
5. Zoetendal, E. G., Akkermans, A. D. L., Akkermans-van Vliet, W. M., de Visser, J. A. G. M. & de Vos, W. M. (2001) Microb. Ecol. Health Dis. 13, 129-134.
6. Zhang, Y., Proenca, R., Maffei, M., Barone, M., Leopold, L. & Friedman, J. M. (1994) Nature 372, 425-432.
7. Ingalis, A. M., Dickie, M. M. & Snell, G. D. (1950) J. Hered. 41, 317-318.
8. Lane, D. J. (1991) in Nucleic Acid Techniques in Bacterial Systematics, eds. Stackebrandt, E. & Goodfellow, M. (Wiley, New York), pp. 115-175.
9. Papineau, D., Walker, J. J., Mojzsis, S. J. & Pace, N. R., Appl. Environ. Microbiol., in press.
10. Cole, J. R., Chai, B., Farris, R. J., Wang, Q., Kulam, S. A., McGarrell, D. M., Garrity, G. M. & Tiedje, J. M. (2005) Nucleic Acids Res. 33, D294-D295.
11. Eckburg, P. B., Bik, E. M., Bernstein, C. N., Purdom, E., Dethlefsein, L., Sargent, M., Gill, S. R., Nelson, K. E. & Relman, D. A. (2005) Science 308, 1635-1638.
12. Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402.
13. Hugenholtz, P. (2002) Genome Biol. 3, REVIEWS0003.
14. Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S., Jobb, G., et al. (2004) Nucleic Acids Res. 32, 1363-1371.
15. Judd, C. M. & McClelland, G. H. (1989) Data Analysis: A Model Comparison Approach (Harcourt Brace Jovanovich, New York).
16. Chao, A., Chazdon, R. L., Colwell, R. K. & Shen, T.-J. (2005) Ecol. Lett. 8, 148-159.
17. Harris, J. K., Kelley, S. T. & Pace, N. R. (2004) Appl. Environ. Microbiol. 70, 845-849.
18. Stamatakis, A., Ludwig, T. & Meier, H. (2005) Bioinformatics 21, 456-463.
19. Ronquist, F. & Huelsenbeck, J. P. (2003) Bioinformatics 19, 1572-1574.
20. Posada, D. & Crandall, K. A. (1998) Bioinformatics 14, 817-818.
21. Barcenilla, A., Pryde, S. E., Martin, J. C., Duncan, S. H., Stewart, C. S., Henderson, C. & Flint, H. J. (2000) Appl. Environ. Microbiol. 66, 1654-1661.
22. Suzuki, K., Meek, B., Doi, Y., Muramatsu, M., Chiba, T., Honjo, T. & Fagarasan, S. (2004) Proc. Natl. Acad. Sci. USA 101, 1981-1986.
23. Ferraris, R. P. & Vinnakota, R. R. (1995) Am. J. Clin. Nutr. 62, 540-546.
24. Warwick, B. P. & Romsos, D. R. (1988) Am. J. Physiol. 255, R141-R148.
25. Gustafson, R. H. & Bowen, R. E. (1997) J. Appl. Microbiol. 83, 531-541.
26. Tringe, S. G., von Mering, C., Kobayashi, A., Salamov, A. A., Chen, K., Chang, H. W., Podar, M., Short, J. M., Mathur, E. J., Detter, J. C., et al. (2005) Science 308, 554-557.
27. Handelsman, J., Rondon, M. R., Brady, S., Clardy, J. & Goodman, R. M. (1998) Chem. Biol. 5, R245-R249.