-
1
-
-
77951557120
-
Non-homologous isofunctional enzymes: A systematic analysis of alternative solutions in enzyme evolution
-
Omelchenko MV, Galperin MY, Wolf YI, Koonin EV (2010) Non-homologous isofunctional enzymes: A systematic analysis of alternative solutions in enzyme evolution. Biol Direct 5: 31.
-
(2010)
Biol Direct
, vol.5
, pp. 31
-
-
Omelchenko, M.V.1
Galperin, M.Y.2
Wolf, Y.I.3
Koonin, E.V.4
-
2
-
-
0014800108
-
Distinguishing homologous from analogous proteins
-
Fitch WM (1970) Distinguishing homologous from analogous proteins. Syst Zool 19: 99-113.
-
(1970)
Syst Zool
, vol.19
, pp. 99-113
-
-
Fitch, W.M.1
-
3
-
-
0031666414
-
Analogous enzymes: Independent inventions in enzyme evolution
-
Galperin MY, Walker DR, Koonin EV (1998) Analogous enzymes: independent inventions in enzyme evolution. Genome Res 8: 779-790.
-
(1998)
Genome Res
, vol.8
, pp. 779-790
-
-
Galperin, M.Y.1
Walker, D.R.2
Koonin, E.V.3
-
4
-
-
0032229196
-
Sources of systematic error in functional annotation of genomes: Domain rearrangement, non-orthologous gene displacement and operon disruption
-
Galperin MY, Koonin EV (1998) Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption. In Silico Biol 1: 55-67.
-
(1998)
Silico Biol
, vol.1
, pp. 55-67
-
-
Galperin, M.Y.1
Koonin, E.V.2
-
5
-
-
1642390114
-
Malic enzymes of Trichomonas vaginalis: Two enzyme families, two distinct origins
-
Dolezal P, Vanacova S, Tachezy J, Hrdy I (2004) Malic enzymes of Trichomonas vaginalis: two enzyme families, two distinct origins. Gene 329: 81-92.
-
(2004)
Gene
, vol.329
, pp. 81-92
-
-
Dolezal, P.1
Vanacova, S.2
Tachezy, J.3
Hrdy, I.4
-
6
-
-
0032815379
-
The two analogous phospho-glycerate mutases of Escherichia coli
-
Fraser HI, Kvaratskhelia M, White MF (1999) The two analogous phospho-glycerate mutases of Escherichia coli. FEBS Lett 455: 344-348.
-
(1999)
FEBS Lett
, vol.455
, pp. 344-348
-
-
Fraser, H.I.1
Kvaratskhelia, M.2
White, M.F.3
-
8
-
-
0033819024
-
Structure, function, and evolution of phosphoglycerate mutases: Comparison with fructose-2,6-bisphosphatase, acid phosphatase, and alkaline phosphatase
-
Jedrzejas MJ (2000) Structure, function, and evolution of phosphoglycerate mutases: comparison with fructose-2,6-bisphosphatase, acid phosphatase, and alkaline phosphatase. Prog Biophys Mol Biol 73: 263-287.
-
(2000)
Prog Biophys Mol Biol
, vol.73
, pp. 263-287
-
-
Jedrzejas, M.J.1
-
9
-
-
0032461412
-
A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mu-tase with alkaline phosphatases and sulfatases
-
Galperin MY, Bairoch A, Koonin EV (1998) A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mu-tase with alkaline phosphatases and sulfatases. Protein Sci 7: 1829-1835.
-
(1998)
Protein Sci
, vol.7
, pp. 1829-1835
-
-
Galperin, M.Y.1
Bairoch, A.2
Koonin, E.V.3
-
10
-
-
0020020251
-
Phylogeny and ontogeny of the phosphoglycerate mutases-IV. Distribution of glycerate-2,3-P2 dependent and independent phosphoglycerate mutases in algae, fungi, plants and animals
-
Carreras J, Mezquita J, Bosch J, Bartrons R, Pons G (1982) Phylogeny and ontogeny of the phosphoglycerate mutases-IV. Distribution of glycerate-2,3-P2 dependent and independent phosphoglycerate mutases in algae, fungi, plants and animals. Comp Biochem Physiol B 71: 591-597.
-
(1982)
Comp Biochem Physiol B
, vol.71
, pp. 591-597
-
-
Carreras, J.1
Mezquita, J.2
Bosch, J.3
Bartrons, R.4
Pons, G.5
-
11
-
-
0034848174
-
A cofactor-dependent phosphoglycerate mutase homolog from Bacillus stearothermophilus is actually a broad specificity phosphatase
-
Rigden DJ, Bagyan I, Lamani E, Setlow P, Jedrzejas MJ (2001) A cofactor-dependent phosphoglycerate mutase homolog from Bacillus stearothermophilus is actually a broad specificity phosphatase. Protein Sci 10: 1835-1846.
-
(2001)
Protein Sci
, vol.10
, pp. 1835-1846
-
-
Rigden, D.J.1
Bagyan, I.2
Lamani, E.3
Setlow, P.4
Jedrzejas, M.J.5
-
12
-
-
2942622384
-
Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes
-
Mirkin BG, Fenner TI, Galperin MY, Koonin EV (2003) Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes. BMC Evol Biol 3: 2.
-
(2003)
BMC Evol Biol
, vol.3
, pp. 2
-
-
Mirkin, B.G.1
Fenner, T.I.2
Galperin, M.Y.3
Koonin, E.V.4
-
13
-
-
4344566444
-
Cofactor-independent phosphoglycerate mutase has an essential role in Caenorhabditis elegans and is conserved in parasitic nematodes
-
Zhang Y, Foster JM, Kumar S, Fougere M, Carlow CK (2004) Cofactor-independent phosphoglycerate mutase has an essential role in Caenorhabditis elegans and is conserved in parasitic nematodes. J Biol Chem 279: 37185-37190.
-
(2004)
J Biol Chem
, vol.279
, pp. 37185-37190
-
-
Zhang, Y.1
Foster, J.M.2
Kumar, S.3
Fougere, M.4
Carlow, C.K.5
-
14
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
-
15
-
-
34447538639
-
Characterization of cofactor-dependent and cofactor-independent phosphoglycerate mutases from Archaea
-
Johnsen U, Schonheit P (2007) Characterization of cofactor-dependent and cofactor-independent phosphoglycerate mutases from Archaea. Extremophiles 11: 647-657.
-
(2007)
Extremophiles
, vol.11
, pp. 647-657
-
-
Johnsen, U.1
Schonheit, P.2
-
16
-
-
0037129849
-
Molecular characterization of phosphoglycerate mutase in archaea
-
van der Oost J, Huynen MA, Verhees CH (2002) Molecular characterization of phosphoglycerate mutase in archaea. FEMS Microbiol Lett 212: 111-120.
-
(2002)
FEMS Microbiol Lett
, vol.212
, pp. 111-120
-
-
van der Oost, J.1
Huynen, M.A.2
Verhees, C.H.3
-
17
-
-
33646544698
-
Structural and functional analysis of Rv3214 from Mycobacterium tuberculosis, a protein with conflicting functional annotations, leads to its characterization as a phosphatase
-
Watkins HA, Baker EN (2006) Structural and functional analysis of Rv3214 from Mycobacterium tuberculosis, a protein with conflicting functional annotations, leads to its characterization as a phosphatase. J Bacteriol 188: 3589-3599.
-
(2006)
J Bacteriol
, vol.188
, pp. 3589-3599
-
-
Watkins, H.A.1
Baker, E.N.2
-
19
-
-
35348938128
-
Molecular and biochemical characterization of nematode cofactor independent phosphoglycerate mutases
-
Raverdy S, Zhang Y, Foster J, Carlow CK (2007) Molecular and biochemical characterization of nematode cofactor independent phosphoglycerate mutases. Mol Biochem Parasitol 156: 210-216.
-
(2007)
Mol Biochem Parasitol
, vol.156
, pp. 210-216
-
-
Raverdy, S.1
Zhang, Y.2
Foster, J.3
Carlow, C.K.4
-
20
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97: 6640-6645.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
21
-
-
0036304272
-
Mechanistic implications for Escherichia coli cofactor-dependent phosphoglycerate mutase based on the high-resolution crystal structure of a vanadate complex
-
Bond CS, White MF, Hunter WN (2002) Mechanistic implications for Escherichia coli cofactor-dependent phosphoglycerate mutase based on the high-resolution crystal structure of a vanadate complex. J Mol Biol 316: 1071-1081.
-
(2002)
J Mol Biol
, vol.316
, pp. 1071-1081
-
-
Bond, C.S.1
White, M.F.2
Hunter, W.N.3
-
22
-
-
0035793607
-
High resolution structure of the phosphohistidine-activated form of Escherichia coli cofactor-dependent phospho-glycerate mutase
-
Bond CS, White MF, Hunter WN (2001) High resolution structure of the phosphohistidine-activated form of Escherichia coli cofactor-dependent phospho-glycerate mutase. J Biol Chem 276: 3247-3253.
-
(2001)
J Biol Chem
, vol.276
, pp. 3247-3253
-
-
Bond, C.S.1
White, M.F.2
Hunter, W.N.3
-
23
-
-
0027955469
-
The amino acid sequence of the small monomeric phosphoglycerate mutase from the fission yeast Schizosaccharomyces pombe
-
Nairn J, Price NC, Fothergill-Gilmore LA, Walker GE, Fothergill JE, et al. (1994) The amino acid sequence of the small monomeric phosphoglycerate mutase from the fission yeast Schizosaccharomyces pombe. Biochem J 297 (Pt 3): 603-608.
-
(1994)
Biochem J
, vol.297
, Issue.3
, pp. 603-608
-
-
Nairn, J.1
Price, N.C.2
Fothergill-Gilmore, L.A.3
Walker, G.E.4
Fothergill, J.E.5
-
24
-
-
0035895429
-
Solution structure and dynamics of an open beta-sheet, glycolytic enzyme, monomeric 23.7 kDa phosphoglycerate mutase from Schizosaccharomyces pombe
-
Uhrinova S, Uhrin D, Nairn J, Price NC, Fothergill-Gilmore LA, et al. (2001) Solution structure and dynamics of an open beta-sheet, glycolytic enzyme, monomeric 23.7 kDa phosphoglycerate mutase from Schizosaccharomyces pombe. J Mol Biol 306: 275-290.
-
(2001)
J Mol Biol
, vol.306
, pp. 275-290
-
-
Uhrinova, S.1
Uhrin, D.2
Nairn, J.3
Price, N.C.4
Fothergill-Gilmore, L.A.5
-
25
-
-
0035576329
-
Conserved core structure and active site residues in alkaline phosphatase superfamily enzymes
-
Galperin MY, Jedrzejas MJ (2001) Conserved core structure and active site residues in alkaline phosphatase superfamily enzymes. Proteins 45: 318-324.
-
(2001)
Proteins
, vol.45
, pp. 318-324
-
-
Galperin, M.Y.1
Jedrzejas, M.J.2
-
26
-
-
0037432139
-
Unexpected catalytic site variation in phosphoprotein phosphatase homologues of cofactor-dependent phosphoglycerate mutase
-
Rigden DJ (2003) Unexpected catalytic site variation in phosphoprotein phosphatase homologues of cofactor-dependent phosphoglycerate mutase. FEBS Lett 536: 77-84.
-
(2003)
FEBS Lett
, vol.536
, pp. 77-84
-
-
Rigden, D.J.1
-
27
-
-
37749041470
-
Patterns and implications of gene gain and loss in the evolution of Prochlorococcus
-
Kettler GC, Martiny AC, Huang K, Zucker J, Coleman ML, et al. (2007) Patterns and implications of gene gain and loss in the evolution of Prochlorococcus. PLoS Genet 3: e231.
-
(2007)
PLoS Genet
, vol.3
-
-
Kettler, G.C.1
Martiny, A.C.2
Huang, K.3
Zucker, J.4
Coleman, M.L.5
-
28
-
-
47149092637
-
Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria
-
Dufresne A, Ostrowski M, Scanlan DJ, Garczarek L, Mazard S, et al. (2008) Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria. Genome Biol 9: R90.
-
(2008)
Genome Biol
, vol.9
-
-
Dufresne, A.1
Ostrowski, M.2
Scanlan, D.J.3
Garczarek, L.4
Mazard, S.5
-
29
-
-
33845974881
-
Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
-
Normand P, Lapierre P, Tisa LS, Gogarten JP, Alloisio N, et al. (2007) Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography. Genome Res 17: 7-15.
-
(2007)
Genome Res
, vol.17
, pp. 7-15
-
-
Normand, P.1
Lapierre, P.2
Tisa, L.S.3
Gogarten, J.P.4
Alloisio, N.5
-
30
-
-
57449104373
-
Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments
-
Oda Y, Larimer FW, Chain PS, Malfatti S, Shin MV, et al. (2008) Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments. Proc Natl Acad Sci U S A 105: 18543-18548.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 18543-18548
-
-
Oda, Y.1
Larimer, F.W.2
Chain, P.S.3
Malfatti, S.4
Shin, M.V.5
-
31
-
-
42949142583
-
The emergence and fate of horizontally acquired genes in Escherichia coli
-
van Passel MW, Marri PR, Ochman H (2008) The emergence and fate of horizontally acquired genes in Escherichia coli. PLoS Comput Biol 4: e1000059.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
van Passel, M.W.1
Marri, P.R.2
Ochman, H.3
-
32
-
-
0030868589
-
Comparison of archaeal and bacterial genomes: Computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea
-
Koonin EV, Mushegian AR, Galperin MY, Walker DR (1997) Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea. Mol Microbiol 25: 619-637.
-
(1997)
Mol Microbiol
, vol.25
, pp. 619-637
-
-
Koonin, E.V.1
Mushegian, A.R.2
Galperin, M.Y.3
Walker, D.R.4
-
33
-
-
0033669672
-
Horizontal gene transfer among microbial genomes: New insights from complete genome analysis
-
Eisen JA (2000) Horizontal gene transfer among microbial genomes: new insights from complete genome analysis. Curr Opin Genet Dev 10: 606-611.
-
(2000)
Curr Opin Genet Dev
, vol.10
, pp. 606-611
-
-
Eisen, J.A.1
-
34
-
-
0342768762
-
Archaeal and bacterial hyperthermophiles: Horizontal gene exchange or common ancestry?
-
Kyrpides NC, Olsen GJ (1999) Archaeal and bacterial hyperthermophiles: horizontal gene exchange or common ancestry? Trends Genet 15: 298-299.
-
(1999)
Trends Genet
, vol.15
, pp. 298-299
-
-
Kyrpides, N.C.1
Olsen, G.J.2
-
35
-
-
0035988323
-
The genome of Methanosarcina mazei: Evidence for lateral gene transfer between bacteria and archaea
-
Deppenmeier U, Johann A, Hartsch T, Merkl R, Schmitz RA, et al. (2002) The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea. J Mol Microbiol Biotechnol 4: 453-461.
-
(2002)
J Mol Microbiol Biotechnol
, vol.4
, pp. 453-461
-
-
Deppenmeier, U.1
Johann, A.2
Hartsch, T.3
Merkl, R.4
Schmitz, R.A.5
-
37
-
-
34648836598
-
Horizontal gene transfer in trypanosomatids
-
Opperdoes FR, Michels PA (2007) Horizontal gene transfer in trypanosomatids. Trends Parasitol 23: 470-476.
-
(2007)
Trends Parasitol
, vol.23
, pp. 470-476
-
-
Opperdoes, F.R.1
Michels, P.A.2
-
38
-
-
17444452078
-
Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast
-
Brinkman FS, Blanchard JL, Cherkasov A, Av-Gay Y, Brunham RC, et al. (2002) Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast. Genome Res 12: 1159-1167.
-
(2002)
Genome Res
, vol.12
, pp. 1159-1167
-
-
Brinkman, F.S.1
Blanchard, J.L.2
Cherkasov, A.3
Av-Gay, Y.4
Brunham, R.C.5
-
39
-
-
33845679477
-
Reconstructing the Mosaic Glycolytic Pathway of the Anaerobic Eukaryote Monocercomonoides
-
Liapounova NA, Hampl V, Gordon PM, Sensen CW, Gedamu L, et al. (2006) Reconstructing the Mosaic Glycolytic Pathway of the Anaerobic Eukaryote Monocercomonoides. Eukaryot Cell.
-
(2006)
Eukaryot Cell
-
-
Liapounova, N.A.1
Hampl, V.2
Gordon, P.M.3
Sensen, C.W.4
Gedamu, L.5
-
40
-
-
0037165614
-
A divergent archaeal member of the alkaline phosphatase binuclear metalloenzyme superfamily has phosphoglycer-ate mutase activity
-
Graham DE, Xu H, White RH (2002) A divergent archaeal member of the alkaline phosphatase binuclear metalloenzyme superfamily has phosphoglycer-ate mutase activity. FEBS Lett 517: 190-194.
-
(2002)
FEBS Lett
, vol.517
, pp. 190-194
-
-
Graham, D.E.1
Xu, H.2
White, R.H.3
-
41
-
-
0031736121
-
Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles
-
Aravind L, Tatusov RL, Wolf YI, Walker DR, Koonin EV (1998) Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles. Trends Genet 14: 442-444.
-
(1998)
Trends Genet
, vol.14
, pp. 442-444
-
-
Aravind, L.1
Tatusov, R.L.2
Wolf, Y.I.3
Walker, D.R.4
Koonin, E.V.5
-
42
-
-
0033609333
-
Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
-
Nelson KE, Clayton RA, Gill SR, Gwinn ML, Dodson RJ, et al. (1999) Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima. Nature 399: 323-329.
-
(1999)
Nature
, vol.399
, pp. 323-329
-
-
Nelson, K.E.1
Clayton, R.A.2
Gill, S.R.3
Gwinn, M.L.4
Dodson, R.J.5
-
43
-
-
0035263816
-
Comparison of the binuclear metalloenzymes diphosphoglycerate-independent phosphoglycerate mutase and alkaline phos-phatase: Their mechanism of catalysis via a phosphoserine intermediate
-
Jedrzejas MJ, Setlow P (2001) Comparison of the binuclear metalloenzymes diphosphoglycerate-independent phosphoglycerate mutase and alkaline phos-phatase: their mechanism of catalysis via a phosphoserine intermediate. Chem Rev 101: 607-618.
-
(2001)
Chem Rev
, vol.101
, pp. 607-618
-
-
Jedrzejas, M.J.1
Setlow, P.2
-
44
-
-
0031738566
-
The enzymatic activity of phosphoglyc-erate mutase from gram-positive endospore-forming bacteria requires Mn2+ and is pH sensitive
-
Chander M, Setlow B, Setlow P (1998) The enzymatic activity of phosphoglyc-erate mutase from gram-positive endospore-forming bacteria requires Mn2+ and is pH sensitive. Can J Microbiol 44: 759-767.
-
(1998)
Can J Microbiol
, vol.44
, pp. 759-767
-
-
Chander, M.1
Setlow, B.2
Setlow, P.3
-
45
-
-
0037993832
-
Transition metal speciation in the cell: Insights from the chemistry of metal ion receptors
-
Finney LA, O'Halloran TV (2003) Transition metal speciation in the cell: insights from the chemistry of metal ion receptors. Science 300: 931-936.
-
(2003)
Science
, vol.300
, pp. 931-936
-
-
Finney, L.A.1
O'Halloran, T.V.2
-
46
-
-
0033563772
-
Structural studies on a 2,3-diphosphoglycerate independent phosphoglycerate mutase from Bacillus stearothermophilus
-
Chander M, Setlow P, Lamani E, Jedrzejas MJ (1999) Structural studies on a 2,3-diphosphoglycerate independent phosphoglycerate mutase from Bacillus stearothermophilus. J Struct Biol 126: 156-165.
-
(1999)
J Struct Biol
, vol.126
, pp. 156-165
-
-
Chander, M.1
Setlow, P.2
Lamani, E.3
Jedrzejas, M.J.4
-
47
-
-
62949234003
-
The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: A candidate target for anti-filarial therapies
-
Foster JM, Raverdy S, Ganatra MB, Colussi PA, Taron CH, et al. (2009) The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: a candidate target for anti-filarial therapies. Parasitol Res 104: 1047-1052.
-
(2009)
Parasitol Res
, vol.104
, pp. 1047-1052
-
-
Foster, J.M.1
Raverdy, S.2
Ganatra, M.B.3
Colussi, P.A.4
Taron, C.H.5
-
48
-
-
0027515064
-
Manganese(II) activation of 3-phosphoglycerate mutase of Bacillus megaterium: PH-sensitive interconversion of active and inactive forms
-
Kuhn NJ, Setlow B, Setlow P (1993) Manganese(II) activation of 3-phosphoglycerate mutase of Bacillus megaterium: pH-sensitive interconversion of active and inactive forms. Arch Biochem Biophys 306: 342-349.
-
(1993)
Arch Biochem Biophys
, vol.306
, pp. 342-349
-
-
Kuhn, N.J.1
Setlow, B.2
Setlow, P.3
-
49
-
-
0028336824
-
Cloning and nucleotide sequences of the genes encoding triose phosphate isomerase, phosphoglycerate mutase, and enolase from Bacillus subtilis
-
Leyva-Vazquez MA, Setlow P (1994) Cloning and nucleotide sequences of the genes encoding triose phosphate isomerase, phosphoglycerate mutase, and enolase from Bacillus subtilis. J Bacteriol 176: 3903-3910.
-
(1994)
J Bacteriol
, vol.176
, pp. 3903-3910
-
-
Leyva-Vazquez, M.A.1
Setlow, P.2
-
50
-
-
0034054819
-
Trypanosoma brucei contains a 2,3-bisphosphoglycerate independent phosphoglyc-erate mutase
-
Chevalier N, Rigden DJ, Van Roy J, Opperdoes FR, Michels PA (2000) Trypanosoma brucei contains a 2,3-bisphosphoglycerate independent phosphoglyc-erate mutase. Eur J Biochem 267: 1464-1472.
-
(2000)
Eur J Biochem
, vol.267
, pp. 1464-1472
-
-
Chevalier, N.1
Rigden, D.J.2
van Roy, J.3
Opperdoes, F.R.4
Michels, P.A.5
-
51
-
-
2342641526
-
Characterization of the cofactor-independent phosphoglycerate mutase from Leishmania mexicana mexicana. Histidines that coordinate the two metal ions in the active site show different susceptibilities to irreversible chemical modification
-
Guerra DG, Vertommen D, Fothergill-Gilmore LA, Opperdoes FR, Michels PA (2004) Characterization of the cofactor-independent phosphoglycerate mutase from Leishmania mexicana mexicana. Histidines that coordinate the two metal ions in the active site show different susceptibilities to irreversible chemical modification. Eur J Biochem 271: 1798-1810.
-
(2004)
Eur J Biochem
, vol.271
, pp. 1798-1810
-
-
Guerra, D.G.1
Vertommen, D.2
Fothergill-Gilmore, L.A.3
Opperdoes, F.R.4
Michels, P.A.5
-
52
-
-
0019327231
-
Vanadate inhibits 2,3-bispho-sphoglycerate dependent phosphoglycerate mutases but does not affect the 2,3-bisphosphoglycerate independent phosphoglycerate mutases
-
Carreras J, Bartrons R, Grisolia S (1980) Vanadate inhibits 2,3-bispho-sphoglycerate dependent phosphoglycerate mutases but does not affect the 2,3-bisphosphoglycerate independent phosphoglycerate mutases. Biochem Biophys Res Commun 96: 1267-1273.
-
(1980)
Biochem Biophys Res Commun
, vol.96
, pp. 1267-1273
-
-
Carreras, J.1
Bartrons, R.2
Grisolia, S.3
-
53
-
-
0030731108
-
The complete genome sequence of the gram-positive bacterium Bacillus subtilis
-
Kunst F, Ogasawara N, Moszer I, Albertini AM, Alloni G, et al. (1997) The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature 390: 249-256.
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
-
54
-
-
0033918192
-
Analysis of the function of a putative 2,3-diphosphoglyceric acid-dependent phosphoglycerate mutase from Bacillus subtilis
-
Pearson CL, Loshon CA, Pedersen LB, Setlow B, Setlow P (2000) Analysis of the function of a putative 2,3-diphosphoglyceric acid-dependent phosphoglycerate mutase from Bacillus subtilis. J Bacteriol 182: 4121-4123.
-
(2000)
J Bacteriol
, vol.182
, pp. 4121-4123
-
-
Pearson, C.L.1
Loshon, C.A.2
Pedersen, L.B.3
Setlow, B.4
Setlow, P.5
-
55
-
-
0037184908
-
Altering of the metal specificity of Escherichia coli alkaline phosphatase
-
Wojciechowski CL, Kantrowitz ER (2002) Altering of the metal specificity of Escherichia coli alkaline phosphatase. J Biol Chem 277: 50476-50481.
-
(2002)
J Biol Chem
, vol.277
, pp. 50476-50481
-
-
Wojciechowski, C.L.1
Kantrowitz, E.R.2
-
56
-
-
0001175140
-
Morphological and physiological changes during stationary phase
-
Neidhardt FC, Curtiss R, Ingraham JL, Lin ECC, Low KB, et al., 2nd ed. Washington DC: AMC Press
-
Huisman GW, Siegele DA, Zambrano MM, Kolter R (1996) Morphological and physiological changes during stationary phase. In: Neidhardt FC, Curtiss R, Ingraham JL, Lin ECC, Low KB, et al. Escherichia coli and Salmonella cellular and molecular biology. 2nd ed. Washington DC: AMC Press. pp 1672-1682.
-
(1996)
Escherichia Coli and Salmonella Cellular and Molecular Biology
, pp. 1672-1682
-
-
Huisman, G.W.1
Siegele, D.A.2
Zambrano, M.M.3
Kolter, R.4
-
57
-
-
33846504443
-
A comprehensive transposon mutant library of Francisella novicida, a bioweapon surrogate
-
Gallagher LA, Ramage E, Jacobs MA, Kaul R, Brittnacher M, et al. (2007) A comprehensive transposon mutant library of Francisella novicida, a bioweapon surrogate. Proc Natl Acad Sci U S A 104: 1009-1014.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 1009-1014
-
-
Gallagher, L.A.1
Ramage, E.2
Jacobs, M.A.3
Kaul, R.4
Brittnacher, M.5
-
58
-
-
31044439550
-
Essential genes of a minimal bacterium
-
Glass JI, Assad-Garcia N, Alperovich N, Yooseph S, Lewis MR, et al. (2006) Essential genes of a minimal bacterium. Proc Natl Acad Sci U S A 103: 425-430.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 425-430
-
-
Glass, J.I.1
Assad-Garcia, N.2
Alperovich, N.3
Yooseph, S.4
Lewis, M.R.5
-
59
-
-
0028953991
-
Isolation and sequence analysis of the Pseudomonas syringae pv. tomato gene encoding a 2,3-diphosphoglycerate-independent phosphoglyceromutase
-
Morris VL, Jackson DP, Grattan M, Ainsworth T, Cuppels DA (1995) Isolation and sequence analysis of the Pseudomonas syringae pv. tomato gene encoding a 2,3-diphosphoglycerate-independent phosphoglyceromutase. J Bacteriol 177: 1727-1733.
-
(1995)
J Bacteriol
, vol.177
, pp. 1727-1733
-
-
Morris, V.L.1
Jackson, D.P.2
Grattan, M.3
Ainsworth, T.4
Cuppels, D.A.5
-
60
-
-
33846608670
-
Cofactor-independent phosphoglycerate mutase is an essential gene in procyclic form Trypanosoma brucei
-
Djikeng A, Raverdy S, Foster J, Bartholomeu D, Zhang Y, et al. (2007) Cofactor-independent phosphoglycerate mutase is an essential gene in procyclic form Trypanosoma brucei. Parasitol Res 100: 887-892.
-
(2007)
Parasitol Res
, vol.100
, pp. 887-892
-
-
Djikeng, A.1
Raverdy, S.2
Foster, J.3
Bartholomeu, D.4
Zhang, Y.5
-
61
-
-
0023098177
-
Isolation of the yeast phosphoglyceromutase gene and construction of deletion mutants
-
Rodicio R, Heinisch J (1987) Isolation of the yeast phosphoglyceromutase gene and construction of deletion mutants. Mol Gen Genet 206: 133-140.
-
(1987)
Mol Gen Genet
, vol.206
, pp. 133-140
-
-
Rodicio, R.1
Heinisch, J.2
-
63
-
-
0037715424
-
Systematic discovery of analogous enzymes in thiamin biosynthesis
-
Morett E, Korbel JO, Rajan E, Saab-Rincon G, Olvera L, et al. (2003) Systematic discovery of analogous enzymes in thiamin biosynthesis. Nat Biotechnol 21: 790-795.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 790-795
-
-
Morett, E.1
Korbel, J.O.2
Rajan, E.3
Saab-Rincon, G.4
Olvera, L.5
-
65
-
-
77950855514
-
Quantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: Implications for classification of enzyme function
-
Almonacid DE, Yera ER, Mitchell JB, Babbitt PC (2010) Quantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: implications for classification of enzyme function. PLoS Comput Biol 6: e1000700.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Almonacid, D.E.1
Yera, E.R.2
Mitchell, J.B.3
Babbitt, P.C.4
-
66
-
-
0032728399
-
Searching for drug targets in microbial genomes
-
Galperin MY, Koonin EV (1999) Searching for drug targets in microbial genomes. Curr Opin Biotechnol 10: 571-578.
-
(1999)
Curr Opin Biotechnol
, vol.10
, pp. 571-578
-
-
Galperin, M.Y.1
Koonin, E.V.2
-
67
-
-
0033382609
-
Functional genomics and enzyme evolution. Homologous and analogous enzymes encoded in microbial genomes
-
Galperin MY, Koonin EV (1999) Functional genomics and enzyme evolution. Homologous and analogous enzymes encoded in microbial genomes. Genetica 106: 159-170.
-
(1999)
Genetica
, vol.106
, pp. 159-170
-
-
Galperin, M.Y.1
Koonin, E.V.2
-
68
-
-
0142197447
-
Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism
-
Ronimus RS, Morgan HW (2003) Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism. Archaea 1: 199-221.
-
(2003)
Archaea
, vol.1
, pp. 199-221
-
-
Ronimus, R.S.1
Morgan, H.W.2
-
69
-
-
0030449870
-
Complete genome sequences of cellular life forms: Glimpses of theoretical evolutionary genomics
-
Koonin EV, Mushegian AR (1996) Complete genome sequences of cellular life forms: glimpses of theoretical evolutionary genomics. Curr Opin Genet Dev 6: 757-762.
-
(1996)
Curr Opin Genet Dev
, vol.6
, pp. 757-762
-
-
Koonin, E.V.1
Mushegian, A.R.2
|