-
1
-
-
55849120858
-
Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner
-
Amero CD, Boomershine WP, Xu Y, Foster M (2008) Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner. Biochemistry 47:11704-11710
-
(2008)
Biochemistry
, vol.47
, pp. 11704-11710
-
-
Amero, C.D.1
Boomershine, W.P.2
Xu, Y.3
Foster, M.4
-
2
-
-
0034826649
-
Characterization of RNase P holoenzymes from Methanococcus jannaschii and Methanothermobacter thermoautotrophicus
-
Andrews AJ, Hall TA, Brown JW (2001) Characterization of RNase P holoenzymes from Methanococcus jannaschii and Methanothermobacter thermoautotrophicus. Biol Chem 382:1171-1177
-
(2001)
Biol Chem
, vol.382
, pp. 1171-1177
-
-
Andrews, A.J.1
Hall, T.A.2
Brown, J.W.3
-
3
-
-
3042784127
-
The two faces of Alba: The evolutionary connection between proteins participating in chromatin structure and RNA metabolism
-
Aravind L, Iyer LM, Anantharaman V (2003) The two faces of Alba: the evolutionary connection between proteins participating in chromatin structure and RNA metabolism. Genome Biol 4:R64
-
(2003)
Genome Biol
, vol.4
-
-
Aravind, L.1
Iyer, L.M.2
Anantharaman, V.3
-
4
-
-
1242273880
-
Interaction of the Bacillus subtilis RNase P with the 30 S ribosomal subunit
-
Barrera A, Pan T (2004) Interaction of the Bacillus subtilis RNase P with the 30 S ribosomal subunit. RNA 10:482-492
-
(2004)
RNA
, vol.10
, pp. 482-492
-
-
Barrera, A.1
Pan, T.2
-
5
-
-
0346734140
-
Structure of Mth11/Mth Rpp 29, an essential protein subunit of archaeal and eukaryotic RNase P
-
Boomershine WP, McElroy CA, Tsai HY, Wilson RC, Gopalan V, Foster MP (2003) Structure of Mth11/Mth Rpp 29, an essential protein subunit of archaeal and eukaryotic RNase P. Proc Natl Acad Sci USA 100:15398-15403
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 15398-15403
-
-
Boomershine, W.P.1
McElroy, C.A.2
Tsai, H.Y.3
Wilson, R.C.4
Gopalan, V.5
Foster, M.P.6
-
6
-
-
34548501510
-
Evidence for induced fit in bacterial RNase P RNA-mediated cleavage
-
Brannvall M, Kikovska E, Wu S, Kirsebom LA (2007) Evidence for induced fit in bacterial RNase P RNA-mediated cleavage. J Mol Biol 372:1149-1164
-
(2007)
J Mol Biol
, vol.372
, pp. 1149-1164
-
-
Brannvall, M.1
Kikovska, E.2
Wu, S.3
Kirsebom, L.A.4
-
7
-
-
0344298926
-
The ribonuclease P database
-
Brown JW (1999) The ribonuclease P database. Nucleic Acids Res 27:314
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 314
-
-
Brown, J.W.1
-
8
-
-
2642635832
-
Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP
-
Chamberlain JR, Lee Y, Lane WS, Engelke DR (1998) Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP. Genes Dev 12:1678-1690
-
(1998)
Genes Dev
, vol.12
, pp. 1678-1690
-
-
Chamberlain, J.R.1
Lee, Y.2
Lane, W.S.3
Engelke, D.R.4
-
9
-
-
0032473358
-
Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs
-
Chen JL, Nolan JM, Harris ME, Pace NR (1998) Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs. EMBO J 17:1515-1525
-
(1998)
EMBO J
, vol.17
, pp. 1515-1525
-
-
Chen, J.L.1
Nolan, J.M.2
Harris, M.E.3
Pace, N.R.4
-
10
-
-
33746538312
-
The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning
-
Christian EL, Smith KM, Perera N, Harris ME (2006) The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning. RNA 12:1463-1467
-
(2006)
RNA
, vol.12
, pp. 1463-1467
-
-
Christian, E.L.1
Smith, K.M.2
Perera, N.3
Harris, M.E.4
-
11
-
-
0032581021
-
The protein component of Bacillus subtilis ribonuclease P increases catalytic efficiency by enhancing interactions with the 5¢ leader sequence of pre-tRNAAsp
-
Crary SM, Niranjanakumari S, Fierke CA (1998) The protein component of Bacillus subtilis ribonuclease P increases catalytic efficiency by enhancing interactions with the 5¢ leader sequence of pre-tRNAAsp. Biochemistry 37:9409-9416
-
(1998)
Biochemistry
, vol.37
, pp. 9409-9416
-
-
Crary, S.M.1
Niranjanakumari, S.2
Fierke, C.A.3
-
12
-
-
0025357508
-
Characterization of ribonuclease P from the archaebacterium Sulfolobus solfataricus
-
Darr SC, Pace B, Pace NR (1990) Characterization of ribonuclease P from the archaebacterium Sulfolobus solfataricus. J Biol Chem 265:12927-12932
-
(1990)
J Biol Chem
, vol.265
, pp. 12927-12932
-
-
Darr, S.C.1
Pace, B.2
Pace, N.R.3
-
13
-
-
0030614558
-
Characterization of two scleroderma autoimmune antigens that copurify with human ribonuclease P
-
Eder PS, Kekuda R, Stolc V, Altman S (1997) Characterization of two scleroderma autoimmune antigens that copurify with human ribonuclease P. Proc Natl Acad Sci USA 94:1101-1106
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 1101-1106
-
-
Eder, P.S.1
Kekuda, R.2
Stolc, V.3
Altman, S.4
-
14
-
-
0642377468
-
Genes within genes within bacteria
-
Ellis JC, Brown JW (2003) Genes within genes within bacteria. Trends Biochem Sci 28:521-523
-
(2003)
Trends Biochem Sci
, vol.28
, pp. 521-523
-
-
Ellis, J.C.1
Brown, J.W.2
-
16
-
-
33646832404
-
A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3
-
Fukuhara H, Kifusa M, Watanabe M, Terada A, Honda T, Numata T, Kakuta Y, Kimura M (2006) A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3. Biochem Biophys Res Commun 343:956-964
-
(2006)
Biochem Biophys Res Commun
, vol.343
, pp. 956-964
-
-
Fukuhara, H.1
Kifusa, M.2
Watanabe, M.3
Terada, A.4
Honda, T.5
Numata, T.6
Kakuta, Y.7
Kimura, M.8
-
17
-
-
34948861713
-
Transcriptional linkage of Haloferax volcanii proteasomal genes with non-proteasomal gene neighbours including RNase P, MOSC domain and SAM-methyltransferase homologues
-
Gil MA, Sherwood KE, Maupin-Furlow JA (2007) Transcriptional linkage of Haloferax volcanii proteasomal genes with non-proteasomal gene neighbours including RNase P, MOSC domain and SAM-methyltransferase homologues. Microbiology 153:3009-3022
-
(2007)
Microbiology
, vol.153
, pp. 3009-3022
-
-
Gil, M.A.1
Sherwood, K.E.2
Maupin-Furlow, J.A.3
-
18
-
-
34848856061
-
Ribonuclease P: Structure and catalysis
-
Gesteland RF, Cech TR, Atlkins JF (eds) Cold Spring Harbor Laboratory Press, New York only online at
-
Gopalan V, Altman S (2006) Ribonuclease P: structure and catalysis. In: Gesteland RF, Cech TR, Atlkins JF (eds) The RNA world. Cold Spring Harbor Laboratory Press, New York (only online at http://rna.cshl.edu)
-
(2006)
The RNA World
-
-
Gopalan, V.1
Altman, S.2
-
19
-
-
33847775629
-
Uniformity amid diversity in RNase P
-
Gopalan V (2007) Uniformity amid diversity in RNase P. Proc Natl Acad Sci USA 104:2031-2032
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 2031-2032
-
-
Gopalan, V.1
-
20
-
-
35448968985
-
Function of heterologous and truncated RNase P proteins in Bacillus subtilis
-
Gossringer M, Hartmann RK (2007) Function of heterologous and truncated RNase P proteins in Bacillus subtilis. Mol Microbiol 66:801-813
-
(2007)
Mol Microbiol
, vol.66
, pp. 801-813
-
-
Gossringer, M.1
Hartmann, R.K.2
-
21
-
-
0021013526
-
The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
-
Guerrier-Takada C, Gardiner K, Marsh T, Pace N, Altman S (1983) The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell 35:849-857
-
(1983)
Cell
, vol.35
, pp. 849-857
-
-
Guerrier-Takada, C.1
Gardiner, K.2
Marsh, T.3
Pace, N.4
Altman, S.5
-
22
-
-
0033990913
-
Inactivation of gene expression using ribonuclease P and external guide sequences
-
Guerrier-Takada C, Altman S (2000) Inactivation of gene expression using ribonuclease P and external guide sequences. Methods Enzymol 313:442-456
-
(2000)
Methods Enzymol
, vol.313
, pp. 442-456
-
-
Guerrier-Takada, C.1
Altman, S.2
-
23
-
-
41549128121
-
Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3
-
Hada K, Nakashima T, Osawa T, Shimada H, Kakuta Y, Kimura M (2008) Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci Biotechnol Biochem 72:749-758
-
(2008)
Biosci Biotechnol Biochem
, vol.72
, pp. 749-758
-
-
Hada, K.1
Nakashima, T.2
Osawa, T.3
Shimada, H.4
Kakuta, Y.5
Kimura, M.6
-
25
-
-
0036231352
-
Archaeal RNase P has multiple protein subunits homologous to eukaryotic nuclear RNase P proteins
-
Hall TA, Brown JW (2002) Archaeal RNase P has multiple protein subunits homologous to eukaryotic nuclear RNase P proteins. RNA 8:296-306
-
(2002)
RNA
, vol.8
, pp. 296-306
-
-
Hall, T.A.1
Brown, J.W.2
-
26
-
-
4344684743
-
Interactions between RNase P protein subunits in archaea
-
Hall TA, Brown JW (2004) Interactions between RNase P protein subunits in archaea. Archaea 1:247-254
-
(2004)
Archaea
, vol.1
, pp. 247-254
-
-
Hall, T.A.1
Brown, J.W.2
-
27
-
-
0001553030
-
Isodensity equilibrium centrifugation of ribosomal particles; The calculation of the protein content of ribosomes and other ribonucleo-proteins from buoyant density measurements
-
Hamilton MG, Kivie M, Lawrence G (1971) Isodensity equilibrium centrifugation of ribosomal particles; the calculation of the protein content of ribosomes and other ribonucleo-proteins from buoyant density measurements. Methods Enzymol 20:512-521
-
(1971)
Methods Enzymol
, vol.20
, pp. 512-521
-
-
Hamilton, M.G.1
Kivie, M.2
Lawrence, G.3
-
28
-
-
0022399990
-
Physical mapping and nucleotide sequence of the rnpA gene that encodes the protein component of ribonuclease P in Escherichia coli
-
Hansen FG, Hansen EB, Atlung T (1985) Physical mapping and nucleotide sequence of the rnpA gene that encodes the protein component of ribonuclease P in Escherichia coli. Gene 38:85-93
-
(1985)
Gene
, vol.38
, pp. 85-93
-
-
Hansen, F.G.1
Hansen, E.B.2
Atlung, T.3
-
29
-
-
0035259427
-
New insight into RNase P RNA structure from comparative analysis of the archaeal RNA
-
Harris JK, Haas ES, Williams D, Frank DN, Brown JW (2001) New insight into RNase P RNA structure from comparative analysis of the archaeal RNA. RNA 7:220-232
-
(2001)
RNA
, vol.7
, pp. 220-232
-
-
Harris, J.K.1
Haas, E.S.2
Williams, D.3
Frank, D.N.4
Brown, J.W.5
-
30
-
-
0038170017
-
Recent insights into the structure and function of the ribonucleoprotein enzyme ribonuclease P
-
Harris ME, Christian EL (2003) Recent insights into the structure and function of the ribonucleoprotein enzyme ribonuclease P. Curr Opin Struct Biol 13:325-333
-
(2003)
Curr Opin Struct Biol
, vol.13
, pp. 325-333
-
-
Harris, M.E.1
Christian, E.L.2
-
31
-
-
0141450351
-
The enigma of ribonuclease P evolution
-
Hartmann E, Hartmann RK (2003) The enigma of ribonuclease P evolution. Trends Genet 19:561-569
-
(2003)
Trends Genet
, vol.19
, pp. 561-569
-
-
Hartmann, E.1
Hartmann, R.K.2
-
32
-
-
54549088876
-
RNase P without RNA: Identification and functional reconstitution of the human mitochondrial tRNA processing enzyme
-
Holzmann J, Frank P, Loffler E, Bennett KL, Gerner C, Rossmanith W (2008) RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme. Cell 135:462-474
-
(2008)
Cell
, vol.135
, pp. 462-474
-
-
Holzmann, J.1
Frank, P.2
Loffler, E.3
Bennett, K.L.4
Gerner, C.5
Rossmanith, W.6
-
33
-
-
55349099821
-
Structure of an archaeal homolog of the human protein complex Rpp 21-Rpp29 that is a key core component for the assembly of active ribonuclease P
-
Honda T, Kakuta Y, Kimura K, Saho J, Kimura M (2008) Structure of an archaeal homolog of the human protein complex Rpp 21-Rpp29 that is a key core component for the assembly of active ribonuclease P. J Mol Biol 384:652-662
-
(2008)
J Mol Biol
, vol.384
, pp. 652-662
-
-
Honda, T.1
Kakuta, Y.2
Kimura, K.3
Saho, J.4
Kimura, M.5
-
34
-
-
0037022633
-
Interactions among the protein and RNA subunits of Saccharomyces cerevisiae nuclear RNase P
-
Houser-Scott F, Xiao S, Millikin CE, Zengel JM, Lindahl L, Engelke DR (2002) Interactions among the protein and RNA subunits of Saccharomyces cerevisiae nuclear RNase P. Proc Natl Acad Sci USA 99:2684-2689
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 2684-2689
-
-
Houser-Scott, F.1
Xiao, S.2
Millikin, C.E.3
Zengel, J.M.4
Lindahl, L.5
Engelke, D.R.6
-
35
-
-
0033538829
-
Localization in the nucleolus and coiled bodies of protein subunits of the ribonucleoprotein ribonuclease P
-
Jarrous N, Wolenski JS, Wesolowski D, Lee C, Altman S (1999) Localization in the nucleolus and coiled bodies of protein subunits of the ribonucleoprotein ribonuclease P. J Cell Biol 146:559-572
-
(1999)
J Cell Biol
, vol.146
, pp. 559-572
-
-
Jarrous, N.1
Wolenski, J.S.2
Wesolowski, D.3
Lee, C.4
Altman, S.5
-
36
-
-
0036210354
-
Human ribonuclease P: Subunits, function, and intranuclear localization
-
Jarrous N (2002) Human ribonuclease P: subunits, function, and intranuclear localization. RNA 8:1-7
-
(2002)
RNA
, vol.8
, pp. 1-7
-
-
Jarrous, N.1
-
38
-
-
24644469952
-
Crystal structure of a ribonuclease P protein Ph1601p from Pyrococcus horikoshii OT3: An archaeal homologue of human nuclear ribonuclease P protein Rpp 21
-
Kakuta Y, Ishimatsu I, Numata T, Kimura K, Yao M, Tanaka I, Kimura M (2005) Crystal structure of a ribonuclease P protein Ph1601p from Pyrococcus horikoshii OT3: an archaeal homologue of human nuclear ribonuclease P protein Rpp 21. Biochemistry 44:12086-12093
-
(2005)
Biochemistry
, vol.44
, pp. 12086-12093
-
-
Kakuta, Y.1
Ishimatsu, I.2
Numata, T.3
Kimura, K.4
Yao, M.5
Tanaka, I.6
Kimura, M.7
-
39
-
-
39149107446
-
Studies on the mechanism of inhibition of bacterial ribonuclease P by aminoglycoside derivatives
-
Kawamoto SA, Sudhahar CG, Hatfield CL, Sun J, Behrman EJ, Gopalan V (2008) Studies on the mechanism of inhibition of bacterial ribonuclease P by aminoglycoside derivatives. Nucleic Acids Res 36:697-704
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 697-704
-
-
Kawamoto, S.A.1
Sudhahar, C.G.2
Hatfield, C.L.3
Sun, J.4
Behrman, E.J.5
Gopalan, V.6
-
40
-
-
33344479270
-
Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: Implication of dimer formation of the holoenzyme
-
Kawano S, Nakashima T, Kakuta Y, Tanaka I, Kimura M (2006) Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: implication of dimer formation of the holoenzyme. J Mol Biol 357:583-591
-
(2006)
J Mol Biol
, vol.357
, pp. 583-591
-
-
Kawano, S.1
Nakashima, T.2
Kakuta, Y.3
Tanaka, I.4
Kimura, M.5
-
41
-
-
0036445585
-
Conservation of helical structure contributes to functional metal ion interactions in the catalytic domain of ribonuclease P RNA
-
Kaye NM, Zahler NH, Christian EL, Harris ME (2002) Conservation of helical structure contributes to functional metal ion interactions in the catalytic domain of ribonuclease P RNA. J Mol Biol 324:429-442
-
(2002)
J Mol Biol
, vol.324
, pp. 429-442
-
-
Kaye, N.M.1
Zahler, N.H.2
Christian, E.L.3
Harris, M.E.4
-
42
-
-
26444490660
-
Crystal structure of a bacterial ribonuclease P RNA
-
Kazantsev AV, Krivenko AA, Harrington DJ, Holbrook SR, Adams PD, Pace NR (2005) Crystal structure of a bacterial ribonuclease P RNA. Proc Natl Acad Sci USA 102:13392-13397
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 13392-13397
-
-
Kazantsev, A.V.1
Krivenko, A.A.2
Harrington, D.J.3
Holbrook, S.R.4
Adams, P.D.5
Pace, N.R.6
-
43
-
-
22444431914
-
Protein-protein interactions in the subunits of ribonuclease P in the hyperthermophilic archaeon Pyrococcus horikoshii OT3
-
Kifusa M, Fukuhara H, Hayashi T, Kimura M (2005) Protein-protein interactions in the subunits of ribonuclease P in the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci Biotechnol Biochem 69:1209-1212
-
(2005)
Biosci Biotechnol Biochem
, vol.69
, pp. 1209-1212
-
-
Kifusa, M.1
Fukuhara, H.2
Hayashi, T.3
Kimura, M.4
-
44
-
-
33847784925
-
Eukaryotic RNase P RNA mediates cleavage in the absence of protein
-
Kikovska E, Svard SG, Kirsebom LA (2007) Eukaryotic RNase P RNA mediates cleavage in the absence of protein. Proc Natl Acad Sci USA 104:2062-2067
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 2062-2067
-
-
Kikovska, E.1
Svard, S.G.2
Kirsebom, L.A.3
-
45
-
-
0027973546
-
Base pairing between Escherichia coli RNase P RNA and its substrate
-
Kirsebom LA, Svard SG (1994) Base pairing between Escherichia coli RNase P RNA and its substrate. EMBO J 13:4870-4876
-
(1994)
EMBO J
, vol.13
, pp. 4870-4876
-
-
Kirsebom, L.A.1
Svard, S.G.2
-
46
-
-
34848863932
-
RNase P RNA mediated cleavage: Substrate recognition and catalysis
-
Kirsebom LA (2007) RNase P RNA mediated cleavage: substrate recognition and catalysis. Biochimie 89:1183-1194
-
(2007)
Biochimie
, vol.89
, pp. 1183-1194
-
-
Kirsebom, L.A.1
-
47
-
-
0034745504
-
Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparativegenomic approach
-
Koonin EV, Wolf YI, Aravind L (2001) Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparativegenomic approach. Genome Res 11:240-252
-
(2001)
Genome Res
, vol.11
, pp. 240-252
-
-
Koonin, E.V.1
Wolf, Y.I.2
Aravind, L.3
-
48
-
-
0043133471
-
Reconstitution of archaeal ribonuclease P from RNA and four protein components
-
Kouzuma Y, Mizoguchi M, Takagi H, Fukuhara H, Tsukamoto M, Numata T, Kimura M (2003) Reconstitution of archaeal ribonuclease P from RNA and four protein components. Biochem Biophys Res Commun 306:666-673
-
(2003)
Biochem Biophys Res Commun
, vol.306
, pp. 666-673
-
-
Kouzuma, Y.1
Mizoguchi, M.2
Takagi, H.3
Fukuhara, H.4
Tsukamoto, M.5
Numata, T.6
Kimura, M.7
-
50
-
-
0037199416
-
The affinity of magnesium binding sites in the Bacillus subtilis RNase P x pre-tRNA complex is enhanced by the protein subunit
-
Kurz JC, Fierke CA (2002) The affinity of magnesium binding sites in the Bacillus subtilis RNase P x pre-tRNA complex is enhanced by the protein subunit. Biochemistry 41:9545-9558
-
(2002)
Biochemistry
, vol.41
, pp. 9545-9558
-
-
Kurz, J.C.1
Fierke, C.A.2
-
51
-
-
0027179962
-
Characterization of the RNase P RNA of Sulfolobus acidocaldarius
-
LaGrandeur TE, Darr SC, Haas ES, Pace NR (1993) Characterization of the RNase P RNA of Sulfolobus acidocaldarius. J Bacteriol 175:5043-5048
-
(1993)
J Bacteriol
, vol.175
, pp. 5043-5048
-
-
Lagrandeur, T.E.1
Darr, S.C.2
Haas, E.S.3
Pace, N.R.4
-
52
-
-
77953461038
-
Discovery of the elusive Pyrobaculum RNase P: An unexpected form of an ancient RNA
-
Lai LB, Chan PP, Cozen AE, Bernick DL, Brown JW, Gopalan V, Lowe T (2009) Discovery of the elusive Pyrobaculum RNase P: An unexpected form of an ancient RNA. Manuscript under review
-
(2009)
Manuscript under Review
-
-
Lai, L.B.1
Chan, P.P.2
Cozen, A.E.3
Bernick, D.L.4
Brown, J.W.5
Gopalan, V.6
Lowe, T.7
-
53
-
-
0023479415
-
Characteristics of ribonuclease P from various organisms
-
Lawrence N, Wesolowski D, Gold H, Bartkiewicz M, Guerrier-Takada C, McClain WH, Altman S (1987) Characteristics of ribonuclease P from various organisms. Cold Spring Harb Symp Quant Biol 52:233-238
-
(1987)
Cold Spring Harb Symp Quant Biol
, vol.52
, pp. 233-238
-
-
Lawrence, N.1
Wesolowski, D.2
Gold, H.3
Bartkiewicz, M.4
Guerrier-Takada, C.5
McClain, W.H.6
Altman, S.7
-
54
-
-
33749031257
-
Extremolytes: Natural compounds from extremophiles for versatile applications
-
Lentzen G, Schwarz T (2006) Extremolytes: Natural compounds from extremophiles for versatile applications. Appl Microbiol Biotechnol 72:623-634
-
(2006)
Appl Microbiol Biotechnol
, vol.72
, pp. 623-634
-
-
Lentzen, G.1
Schwarz, T.2
-
55
-
-
58549095469
-
Minor changes largely restore catalytic activity of archaeal RNase P RNA from Methanothermobacter thermoautotrophicus
-
Li D, Willkomm DK, Hartmann RK (2009) Minor changes largely restore catalytic activity of archaeal RNase P RNA from Methanothermobacter thermoautotrophicus. Nucleic Acids Res 37(1):231-242
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.1
, pp. 231-242
-
-
Li, D.1
Willkomm, D.K.2
Hartmann, R.K.3
-
56
-
-
4644225942
-
In search of RNase P RNA from microbial genomes
-
Li Y, Altman S (2004) In search of RNase P RNA from microbial genomes. RNA 10:1533-1540
-
(2004)
RNA
, vol.10
, pp. 1533-1540
-
-
Li, Y.1
Altman, S.2
-
57
-
-
0029949699
-
Domain structure of the ribozyme from eubacterial ribonuclease P
-
Loria A, Pan T (1996) Domain structure of the ribozyme from eubacterial ribonuclease P. RNA 2:551-563
-
(1996)
RNA
, vol.2
, pp. 551-563
-
-
Loria, A.1
Pan, T.2
-
58
-
-
0242266622
-
Eukaryotic RNase P: Role of RNA and protein subunits of a primordial catalytic ribonucleoprotein in RNA-based catalysis
-
Mann H, Ben-Asouli Y, Schein A, Moussa S, Jarrous N (2003) Eukaryotic RNase P: role of RNA and protein subunits of a primordial catalytic ribonucleoprotein in RNA-based catalysis. Mol Cell 12:925-935
-
(2003)
Mol Cell
, vol.12
, pp. 925-935
-
-
Mann, H.1
Ben-Asouli, Y.2
Schein, A.3
Moussa, S.4
Jarrous, N.5
-
59
-
-
77953423025
-
A structural analysis of ribonuclease P
-
Lilley DMJ, Eckstein F (eds) . RSC Publishing, Cambridge
-
Marquez SM, Evans D, Kazantsev AV, Pace NR (2008) A structural analysis of ribonuclease P. In: Lilley DMJ, Eckstein F (eds) Ribozymes and RNA catalysis. RSC Publishing, Cambridge, pp 153-177
-
(2008)
Ribozymes and RNA Catalysis
, pp. 153-177
-
-
Marquez, S.M.1
Evans, D.2
Kazantsev, A.V.3
Pace, N.R.4
-
60
-
-
0032546728
-
Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis
-
Massire C, Jaeger L, Westhof E (1998) Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis. J Mol Biol 279:773-793
-
(1998)
J Mol Biol
, vol.279
, pp. 773-793
-
-
Massire, C.1
Jaeger, L.2
Westhof, E.3
-
61
-
-
0025992792
-
The RNA component of RNase P from the archaebacterium Haloferax volcanii
-
Nieuwlandt DT, Haas ES, Daniels CJ (1991) The RNA component of RNase P from the archaebacterium Haloferax volcanii. J Biol Chem 266:5689-5695
-
(1991)
J Biol Chem
, vol.266
, pp. 5689-5695
-
-
Nieuwlandt, D.T.1
Haas, E.S.2
Daniels, C.J.3
-
62
-
-
0032417685
-
Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA
-
Niranjanakumari S, Stams T, Crary SM, Christianson DW, Fierke CA (1998) Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA. Proc Natl Acad Sci USA 95:15212-15217
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 15212-15217
-
-
Niranjanakumari, S.1
Stams, T.2
Crary, S.M.3
Christianson, D.W.4
Fierke, C.A.5
-
63
-
-
4344638194
-
Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: An archaeal homolog of eukaryotic ribonuclease P protein Rpp 29
-
Numata T, Ishimatsu I, Kakuta Y, Tanaka I, Kimura M (2004) Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: an archaeal homolog of eukaryotic ribonuclease P protein Rpp 29. RNA 10:1423-1432
-
(2004)
RNA
, vol.10
, pp. 1423-1432
-
-
Numata, T.1
Ishimatsu, I.2
Kakuta, Y.3
Tanaka, I.4
Kimura, M.5
-
64
-
-
0028131972
-
Interaction of the 3¢-end of tRNA with ribonuclease P RNA
-
Oh BK, Pace NR (1994) Interaction of the 3¢-end of tRNA with ribonuclease P RNA. Nucleic Acids Res 22:4087-4094
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4087-4094
-
-
Oh, B.K.1
Pace, N.R.2
-
65
-
-
0029556990
-
Probing of tertiary interactions in RNA: 2¢-hydroxyl-base contacts between the RNase P RNA and pre-tRNA
-
Pan T, Loria A, Zhong K (1995) Probing of tertiary interactions in RNA: 2¢-hydroxyl-base contacts between the RNase P RNA and pre-tRNA. Proc Natl Acad Sci USA 92:12510-12514
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 12510-12514
-
-
Pan, T.1
Loria, A.2
Zhong, K.3
-
66
-
-
0033529256
-
RNase P RNAs from some Archaea are catalytically active
-
Pannucci JA, Haas ES, Hall TA, Harris JK, Brown JW (1999) RNase P RNAs from some Archaea are catalytically active. Proc Natl Acad Sci USA 96:7803-7808
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 7803-7808
-
-
Pannucci, J.A.1
Haas, E.S.2
Hall, T.A.3
Harris, J.K.4
Brown, J.W.5
-
67
-
-
47249122660
-
Studies on Methanocaldococcus jannaschii RNase P reveal insights into the roles of RNA and protein cofactors in RNase P catalysis
-
Pulukkunat DK, Gopalan V (2008) Studies on Methanocaldococcus jannaschii RNase P reveal insights into the roles of RNA and protein cofactors in RNase P catalysis. Nucleic Acids Res 36:4172-4180
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4172-4180
-
-
Pulukkunat, D.K.1
Gopalan, V.2
-
69
-
-
0344823672
-
NMR structure of an archaeal homologue of ribonuclease P protein Rpp 29
-
Sidote DJ, Hoffman DW (2003) NMR structure of an archaeal homologue of ribonuclease P protein Rpp 29. Biochemistry 42:13541-13550
-
(2003)
Biochemistry
, vol.42
, pp. 13541-13550
-
-
Sidote, D.J.1
Hoffman, D.W.2
-
70
-
-
8344266164
-
Crystal structure of archaeal ribonuclease P protein aRpp 29 from Archaeoglobus fulgidus
-
Sidote DJ, Heideker J, Hoffman DW (2004) Crystal structure of archaeal ribonuclease P protein aRpp 29 from Archaeoglobus fulgidus. Biochemistry 43:14128-14138
-
(2004)
Biochemistry
, vol.43
, pp. 14128-14138
-
-
Sidote, D.J.1
Heideker, J.2
Hoffman, D.W.3
-
71
-
-
0032076249
-
Ribonuclease P protein structure: Evolutionary origins in the translational apparatus
-
Stams T, Niranjanakumari S, Fierke CA, Christianson DW (1998) Ribonuclease P protein structure: evolutionary origins in the translational apparatus. Science 280:752-755
-
(1998)
Science
, vol.280
, pp. 752-755
-
-
Stams, T.1
Niranjanakumari, S.2
Fierke, C.A.3
Christianson, D.W.4
-
72
-
-
33748361597
-
Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P
-
Sun L, Campbell FE, Zahler NH, Harris ME (2006) Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P. EMBO J 25:3998-4007
-
(2006)
EMBO J
, vol.25
, pp. 3998-4007
-
-
Sun, L.1
Campbell, F.E.2
Zahler, N.H.3
Harris, M.E.4
-
73
-
-
34548371821
-
Evidence that binding of C5 protein to P RNA enhances ribozyme catalysis by influencing active site metal ion affinity
-
Sun L, Harris ME (2007) Evidence that binding of C5 protein to P RNA enhances ribozyme catalysis by influencing active site metal ion affinity. RNA 13:1505-1515
-
(2007)
RNA
, vol.13
, pp. 1505-1515
-
-
Sun, L.1
Harris, M.E.2
-
74
-
-
2942627587
-
Crystal structure of the ribonuclease P protein Ph1877p from hyperthermophilic archaeon Pyrococcus horikoshii OT3
-
DOI 10.1016/j.bbrc.2004.05.055, PII S0006291X04009970
-
Takagi H, Watanabe M, Kakuta Y, Kamachi R, Numata T, Tanaka I, Kimura M (2004) Crystal structure of the ribonuclease P protein Ph1877p from hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biochem Biophys Res Commun 319:787-794 (Pubitemid 38739390)
-
(2004)
Biochemical and Biophysical Research Communications
, vol.319
, Issue.3
, pp. 787-794
-
-
Takagi, H.1
Watanabe, M.2
Kakuta, Y.3
Kamachi, R.4
Numata, T.5
Tanaka, I.6
Kimura, M.7
-
75
-
-
33750377546
-
Characterization of the archaeal ribonuclease P proteins from Pyrococcus horikoshii OT3
-
Terada A, Honda T, Fukuhara H, Hada K, Kimura M (2006) Characterization of the archaeal ribonuclease P proteins from Pyrococcus horikoshii OT3. J Biochem 140:293-298
-
(2006)
J Biochem
, vol.140
, pp. 293-298
-
-
Terada, A.1
Honda, T.2
Fukuhara, H.3
Hada, K.4
Kimura, M.5
-
76
-
-
36148982232
-
Identification of nucleotide residues essential for RNase P activity from the hyperthermophilic archaeon Pyrococcus horikoshii OT3
-
Terada A, Yoshida T, Kimura M (2007) Identification of nucleotide residues essential for RNase P activity from the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci Biotechnol. Biochem. 71:1940-1945
-
(2007)
Biosci Biotechnol. Biochem.
, vol.71
, pp. 1940-1945
-
-
Terada, A.1
Yoshida, T.2
Kimura, M.3
-
77
-
-
25644433566
-
Crystal structure of the RNA component of bacterial ribonuclease P
-
DOI 10.1038/nature04074, PII N04074
-
Torres-Larios A, Swinger KK, Krasilnikov AS, Pan T, Mondragon A (2005) Crystal structure of the RNA component of bacterial ribonuclease P. Nature 437:584-587 (Pubitemid 41613559)
-
(2005)
Nature
, vol.437
, Issue.7058
, pp. 584-587
-
-
Torres-Larios, A.1
Swinger, K.K.2
Krasilnikov, A.S.3
Pan, T.4
Mondragon, A.5
-
78
-
-
0037462929
-
Molecular modeling of the threedimensional structure of the bacterial RNase P holoenzyme
-
Tsai HY, Masquida B, Biswas R, Westhof E, Gopalan V (2003) Molecular modeling of the threedimensional structure of the bacterial RNase P holoenzyme. J Mol Biol 325:661-675
-
(2003)
J Mol Biol
, vol.325
, pp. 661-675
-
-
Tsai, H.Y.1
Masquida, B.2
Biswas, R.3
Westhof, E.4
Gopalan, V.5
-
80
-
-
0030455540
-
Structural feature of the initiator tRNA gene from Pyrodictium occultum and the thermal stability of its gene product, tRNA(imet)
-
Ushida C, Muramatsu T, Mizushima H, Ueda T, Watanabe K, Stetter KO, Crain PF, McCloskey JA, Kuchino Y (1996) Structural feature of the initiator tRNA gene from Pyrodictium occultum and the thermal stability of its gene product, tRNA(imet). Biochimie 78:847-855
-
(1996)
Biochimie
, vol.78
, pp. 847-855
-
-
Ushida, C.1
Muramatsu, T.2
Mizushima, H.3
Ueda, T.4
Watanabe, K.5
Stetter, K.O.6
Crain, P.F.7
McCloskey, J.A.8
Kuchino, Y.9
-
81
-
-
0023696278
-
Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli
-
Vioque A, Arnez J, Altman S (1988) Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli. J Mol Biol 202:835-848
-
(1988)
J Mol Biol
, vol.202
, pp. 835-848
-
-
Vioque, A.1
Arnez, J.2
Altman, S.3
-
82
-
-
33645747326
-
Ribonuclease P: The evolution of an ancient RNA enzyme
-
Walker SC, Engelke DR (2006) Ribonuclease P: the evolution of an ancient RNA enzyme. Crit Rev Biochem Mol Biol 41:77-102
-
(2006)
Crit Rev Biochem Mol Biol
, vol.41
, pp. 77-102
-
-
Walker, S.C.1
Engelke, D.R.2
-
83
-
-
32344450242
-
Structure of Pfu Pop5, an archaeal RNase P protein
-
Wilson RC, Bohlen CJ, Foster MP, Bell CE (2006) Structure of Pfu Pop5, an archaeal RNase P protein. Proc Natl Acad Sci USA 103:873-878
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 873-878
-
-
Wilson, R.C.1
Bohlen, C.J.2
Foster, M.P.3
Bell, C.E.4
-
84
-
-
21844478112
-
Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing
-
Xiao S, Day-Storms JJ, Srisawat C, Fierke CA, Engelke DR (2005) Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing. RNA 11:885-896
-
(2005)
RNA
, vol.11
, pp. 885-896
-
-
Xiao, S.1
Day-Storms, J.J.2
Srisawat, C.3
Fierke, C.A.4
Engelke, D.R.5
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