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Volumn 10, Issue , 2010, Pages 153-172

Archaeal RNase P: A Mosaic of its bacterial and eukaryal relatives

Author keywords

[No Author keywords available]

Indexed keywords

RIBONUCLEASE P; TRANSFER RNA;

EID: 77953400424     PISSN: 18713025     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4419-1142-1_9     Document Type: Review
Times cited : (10)

References (84)
  • 1
    • 55849120858 scopus 로고    scopus 로고
    • Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner
    • Amero CD, Boomershine WP, Xu Y, Foster M (2008) Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner. Biochemistry 47:11704-11710
    • (2008) Biochemistry , vol.47 , pp. 11704-11710
    • Amero, C.D.1    Boomershine, W.P.2    Xu, Y.3    Foster, M.4
  • 2
    • 0034826649 scopus 로고    scopus 로고
    • Characterization of RNase P holoenzymes from Methanococcus jannaschii and Methanothermobacter thermoautotrophicus
    • Andrews AJ, Hall TA, Brown JW (2001) Characterization of RNase P holoenzymes from Methanococcus jannaschii and Methanothermobacter thermoautotrophicus. Biol Chem 382:1171-1177
    • (2001) Biol Chem , vol.382 , pp. 1171-1177
    • Andrews, A.J.1    Hall, T.A.2    Brown, J.W.3
  • 3
    • 3042784127 scopus 로고    scopus 로고
    • The two faces of Alba: The evolutionary connection between proteins participating in chromatin structure and RNA metabolism
    • Aravind L, Iyer LM, Anantharaman V (2003) The two faces of Alba: the evolutionary connection between proteins participating in chromatin structure and RNA metabolism. Genome Biol 4:R64
    • (2003) Genome Biol , vol.4
    • Aravind, L.1    Iyer, L.M.2    Anantharaman, V.3
  • 4
    • 1242273880 scopus 로고    scopus 로고
    • Interaction of the Bacillus subtilis RNase P with the 30 S ribosomal subunit
    • Barrera A, Pan T (2004) Interaction of the Bacillus subtilis RNase P with the 30 S ribosomal subunit. RNA 10:482-492
    • (2004) RNA , vol.10 , pp. 482-492
    • Barrera, A.1    Pan, T.2
  • 6
    • 34548501510 scopus 로고    scopus 로고
    • Evidence for induced fit in bacterial RNase P RNA-mediated cleavage
    • Brannvall M, Kikovska E, Wu S, Kirsebom LA (2007) Evidence for induced fit in bacterial RNase P RNA-mediated cleavage. J Mol Biol 372:1149-1164
    • (2007) J Mol Biol , vol.372 , pp. 1149-1164
    • Brannvall, M.1    Kikovska, E.2    Wu, S.3    Kirsebom, L.A.4
  • 7
    • 0344298926 scopus 로고    scopus 로고
    • The ribonuclease P database
    • Brown JW (1999) The ribonuclease P database. Nucleic Acids Res 27:314
    • (1999) Nucleic Acids Res , vol.27 , pp. 314
    • Brown, J.W.1
  • 8
    • 2642635832 scopus 로고    scopus 로고
    • Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP
    • Chamberlain JR, Lee Y, Lane WS, Engelke DR (1998) Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP. Genes Dev 12:1678-1690
    • (1998) Genes Dev , vol.12 , pp. 1678-1690
    • Chamberlain, J.R.1    Lee, Y.2    Lane, W.S.3    Engelke, D.R.4
  • 9
    • 0032473358 scopus 로고    scopus 로고
    • Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs
    • Chen JL, Nolan JM, Harris ME, Pace NR (1998) Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs. EMBO J 17:1515-1525
    • (1998) EMBO J , vol.17 , pp. 1515-1525
    • Chen, J.L.1    Nolan, J.M.2    Harris, M.E.3    Pace, N.R.4
  • 10
    • 33746538312 scopus 로고    scopus 로고
    • The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning
    • Christian EL, Smith KM, Perera N, Harris ME (2006) The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning. RNA 12:1463-1467
    • (2006) RNA , vol.12 , pp. 1463-1467
    • Christian, E.L.1    Smith, K.M.2    Perera, N.3    Harris, M.E.4
  • 11
    • 0032581021 scopus 로고    scopus 로고
    • The protein component of Bacillus subtilis ribonuclease P increases catalytic efficiency by enhancing interactions with the 5¢ leader sequence of pre-tRNAAsp
    • Crary SM, Niranjanakumari S, Fierke CA (1998) The protein component of Bacillus subtilis ribonuclease P increases catalytic efficiency by enhancing interactions with the 5¢ leader sequence of pre-tRNAAsp. Biochemistry 37:9409-9416
    • (1998) Biochemistry , vol.37 , pp. 9409-9416
    • Crary, S.M.1    Niranjanakumari, S.2    Fierke, C.A.3
  • 12
    • 0025357508 scopus 로고
    • Characterization of ribonuclease P from the archaebacterium Sulfolobus solfataricus
    • Darr SC, Pace B, Pace NR (1990) Characterization of ribonuclease P from the archaebacterium Sulfolobus solfataricus. J Biol Chem 265:12927-12932
    • (1990) J Biol Chem , vol.265 , pp. 12927-12932
    • Darr, S.C.1    Pace, B.2    Pace, N.R.3
  • 13
    • 0030614558 scopus 로고    scopus 로고
    • Characterization of two scleroderma autoimmune antigens that copurify with human ribonuclease P
    • Eder PS, Kekuda R, Stolc V, Altman S (1997) Characterization of two scleroderma autoimmune antigens that copurify with human ribonuclease P. Proc Natl Acad Sci USA 94:1101-1106
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 1101-1106
    • Eder, P.S.1    Kekuda, R.2    Stolc, V.3    Altman, S.4
  • 14
    • 0642377468 scopus 로고    scopus 로고
    • Genes within genes within bacteria
    • Ellis JC, Brown JW (2003) Genes within genes within bacteria. Trends Biochem Sci 28:521-523
    • (2003) Trends Biochem Sci , vol.28 , pp. 521-523
    • Ellis, J.C.1    Brown, J.W.2
  • 16
    • 33646832404 scopus 로고    scopus 로고
    • A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3
    • Fukuhara H, Kifusa M, Watanabe M, Terada A, Honda T, Numata T, Kakuta Y, Kimura M (2006) A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3. Biochem Biophys Res Commun 343:956-964
    • (2006) Biochem Biophys Res Commun , vol.343 , pp. 956-964
    • Fukuhara, H.1    Kifusa, M.2    Watanabe, M.3    Terada, A.4    Honda, T.5    Numata, T.6    Kakuta, Y.7    Kimura, M.8
  • 17
    • 34948861713 scopus 로고    scopus 로고
    • Transcriptional linkage of Haloferax volcanii proteasomal genes with non-proteasomal gene neighbours including RNase P, MOSC domain and SAM-methyltransferase homologues
    • Gil MA, Sherwood KE, Maupin-Furlow JA (2007) Transcriptional linkage of Haloferax volcanii proteasomal genes with non-proteasomal gene neighbours including RNase P, MOSC domain and SAM-methyltransferase homologues. Microbiology 153:3009-3022
    • (2007) Microbiology , vol.153 , pp. 3009-3022
    • Gil, M.A.1    Sherwood, K.E.2    Maupin-Furlow, J.A.3
  • 18
    • 34848856061 scopus 로고    scopus 로고
    • Ribonuclease P: Structure and catalysis
    • Gesteland RF, Cech TR, Atlkins JF (eds) Cold Spring Harbor Laboratory Press, New York only online at
    • Gopalan V, Altman S (2006) Ribonuclease P: structure and catalysis. In: Gesteland RF, Cech TR, Atlkins JF (eds) The RNA world. Cold Spring Harbor Laboratory Press, New York (only online at http://rna.cshl.edu)
    • (2006) The RNA World
    • Gopalan, V.1    Altman, S.2
  • 19
    • 33847775629 scopus 로고    scopus 로고
    • Uniformity amid diversity in RNase P
    • Gopalan V (2007) Uniformity amid diversity in RNase P. Proc Natl Acad Sci USA 104:2031-2032
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 2031-2032
    • Gopalan, V.1
  • 20
    • 35448968985 scopus 로고    scopus 로고
    • Function of heterologous and truncated RNase P proteins in Bacillus subtilis
    • Gossringer M, Hartmann RK (2007) Function of heterologous and truncated RNase P proteins in Bacillus subtilis. Mol Microbiol 66:801-813
    • (2007) Mol Microbiol , vol.66 , pp. 801-813
    • Gossringer, M.1    Hartmann, R.K.2
  • 21
    • 0021013526 scopus 로고
    • The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
    • Guerrier-Takada C, Gardiner K, Marsh T, Pace N, Altman S (1983) The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell 35:849-857
    • (1983) Cell , vol.35 , pp. 849-857
    • Guerrier-Takada, C.1    Gardiner, K.2    Marsh, T.3    Pace, N.4    Altman, S.5
  • 22
    • 0033990913 scopus 로고    scopus 로고
    • Inactivation of gene expression using ribonuclease P and external guide sequences
    • Guerrier-Takada C, Altman S (2000) Inactivation of gene expression using ribonuclease P and external guide sequences. Methods Enzymol 313:442-456
    • (2000) Methods Enzymol , vol.313 , pp. 442-456
    • Guerrier-Takada, C.1    Altman, S.2
  • 23
    • 41549128121 scopus 로고    scopus 로고
    • Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3
    • Hada K, Nakashima T, Osawa T, Shimada H, Kakuta Y, Kimura M (2008) Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci Biotechnol Biochem 72:749-758
    • (2008) Biosci Biotechnol Biochem , vol.72 , pp. 749-758
    • Hada, K.1    Nakashima, T.2    Osawa, T.3    Shimada, H.4    Kakuta, Y.5    Kimura, M.6
  • 24
  • 25
    • 0036231352 scopus 로고    scopus 로고
    • Archaeal RNase P has multiple protein subunits homologous to eukaryotic nuclear RNase P proteins
    • Hall TA, Brown JW (2002) Archaeal RNase P has multiple protein subunits homologous to eukaryotic nuclear RNase P proteins. RNA 8:296-306
    • (2002) RNA , vol.8 , pp. 296-306
    • Hall, T.A.1    Brown, J.W.2
  • 26
    • 4344684743 scopus 로고    scopus 로고
    • Interactions between RNase P protein subunits in archaea
    • Hall TA, Brown JW (2004) Interactions between RNase P protein subunits in archaea. Archaea 1:247-254
    • (2004) Archaea , vol.1 , pp. 247-254
    • Hall, T.A.1    Brown, J.W.2
  • 27
    • 0001553030 scopus 로고
    • Isodensity equilibrium centrifugation of ribosomal particles; The calculation of the protein content of ribosomes and other ribonucleo-proteins from buoyant density measurements
    • Hamilton MG, Kivie M, Lawrence G (1971) Isodensity equilibrium centrifugation of ribosomal particles; the calculation of the protein content of ribosomes and other ribonucleo-proteins from buoyant density measurements. Methods Enzymol 20:512-521
    • (1971) Methods Enzymol , vol.20 , pp. 512-521
    • Hamilton, M.G.1    Kivie, M.2    Lawrence, G.3
  • 28
    • 0022399990 scopus 로고
    • Physical mapping and nucleotide sequence of the rnpA gene that encodes the protein component of ribonuclease P in Escherichia coli
    • Hansen FG, Hansen EB, Atlung T (1985) Physical mapping and nucleotide sequence of the rnpA gene that encodes the protein component of ribonuclease P in Escherichia coli. Gene 38:85-93
    • (1985) Gene , vol.38 , pp. 85-93
    • Hansen, F.G.1    Hansen, E.B.2    Atlung, T.3
  • 29
    • 0035259427 scopus 로고    scopus 로고
    • New insight into RNase P RNA structure from comparative analysis of the archaeal RNA
    • Harris JK, Haas ES, Williams D, Frank DN, Brown JW (2001) New insight into RNase P RNA structure from comparative analysis of the archaeal RNA. RNA 7:220-232
    • (2001) RNA , vol.7 , pp. 220-232
    • Harris, J.K.1    Haas, E.S.2    Williams, D.3    Frank, D.N.4    Brown, J.W.5
  • 30
    • 0038170017 scopus 로고    scopus 로고
    • Recent insights into the structure and function of the ribonucleoprotein enzyme ribonuclease P
    • Harris ME, Christian EL (2003) Recent insights into the structure and function of the ribonucleoprotein enzyme ribonuclease P. Curr Opin Struct Biol 13:325-333
    • (2003) Curr Opin Struct Biol , vol.13 , pp. 325-333
    • Harris, M.E.1    Christian, E.L.2
  • 31
    • 0141450351 scopus 로고    scopus 로고
    • The enigma of ribonuclease P evolution
    • Hartmann E, Hartmann RK (2003) The enigma of ribonuclease P evolution. Trends Genet 19:561-569
    • (2003) Trends Genet , vol.19 , pp. 561-569
    • Hartmann, E.1    Hartmann, R.K.2
  • 32
    • 54549088876 scopus 로고    scopus 로고
    • RNase P without RNA: Identification and functional reconstitution of the human mitochondrial tRNA processing enzyme
    • Holzmann J, Frank P, Loffler E, Bennett KL, Gerner C, Rossmanith W (2008) RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme. Cell 135:462-474
    • (2008) Cell , vol.135 , pp. 462-474
    • Holzmann, J.1    Frank, P.2    Loffler, E.3    Bennett, K.L.4    Gerner, C.5    Rossmanith, W.6
  • 33
    • 55349099821 scopus 로고    scopus 로고
    • Structure of an archaeal homolog of the human protein complex Rpp 21-Rpp29 that is a key core component for the assembly of active ribonuclease P
    • Honda T, Kakuta Y, Kimura K, Saho J, Kimura M (2008) Structure of an archaeal homolog of the human protein complex Rpp 21-Rpp29 that is a key core component for the assembly of active ribonuclease P. J Mol Biol 384:652-662
    • (2008) J Mol Biol , vol.384 , pp. 652-662
    • Honda, T.1    Kakuta, Y.2    Kimura, K.3    Saho, J.4    Kimura, M.5
  • 35
    • 0033538829 scopus 로고    scopus 로고
    • Localization in the nucleolus and coiled bodies of protein subunits of the ribonucleoprotein ribonuclease P
    • Jarrous N, Wolenski JS, Wesolowski D, Lee C, Altman S (1999) Localization in the nucleolus and coiled bodies of protein subunits of the ribonucleoprotein ribonuclease P. J Cell Biol 146:559-572
    • (1999) J Cell Biol , vol.146 , pp. 559-572
    • Jarrous, N.1    Wolenski, J.S.2    Wesolowski, D.3    Lee, C.4    Altman, S.5
  • 36
    • 0036210354 scopus 로고    scopus 로고
    • Human ribonuclease P: Subunits, function, and intranuclear localization
    • Jarrous N (2002) Human ribonuclease P: subunits, function, and intranuclear localization. RNA 8:1-7
    • (2002) RNA , vol.8 , pp. 1-7
    • Jarrous, N.1
  • 38
    • 24644469952 scopus 로고    scopus 로고
    • Crystal structure of a ribonuclease P protein Ph1601p from Pyrococcus horikoshii OT3: An archaeal homologue of human nuclear ribonuclease P protein Rpp 21
    • Kakuta Y, Ishimatsu I, Numata T, Kimura K, Yao M, Tanaka I, Kimura M (2005) Crystal structure of a ribonuclease P protein Ph1601p from Pyrococcus horikoshii OT3: an archaeal homologue of human nuclear ribonuclease P protein Rpp 21. Biochemistry 44:12086-12093
    • (2005) Biochemistry , vol.44 , pp. 12086-12093
    • Kakuta, Y.1    Ishimatsu, I.2    Numata, T.3    Kimura, K.4    Yao, M.5    Tanaka, I.6    Kimura, M.7
  • 40
    • 33344479270 scopus 로고    scopus 로고
    • Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: Implication of dimer formation of the holoenzyme
    • Kawano S, Nakashima T, Kakuta Y, Tanaka I, Kimura M (2006) Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: implication of dimer formation of the holoenzyme. J Mol Biol 357:583-591
    • (2006) J Mol Biol , vol.357 , pp. 583-591
    • Kawano, S.1    Nakashima, T.2    Kakuta, Y.3    Tanaka, I.4    Kimura, M.5
  • 41
    • 0036445585 scopus 로고    scopus 로고
    • Conservation of helical structure contributes to functional metal ion interactions in the catalytic domain of ribonuclease P RNA
    • Kaye NM, Zahler NH, Christian EL, Harris ME (2002) Conservation of helical structure contributes to functional metal ion interactions in the catalytic domain of ribonuclease P RNA. J Mol Biol 324:429-442
    • (2002) J Mol Biol , vol.324 , pp. 429-442
    • Kaye, N.M.1    Zahler, N.H.2    Christian, E.L.3    Harris, M.E.4
  • 43
    • 22444431914 scopus 로고    scopus 로고
    • Protein-protein interactions in the subunits of ribonuclease P in the hyperthermophilic archaeon Pyrococcus horikoshii OT3
    • Kifusa M, Fukuhara H, Hayashi T, Kimura M (2005) Protein-protein interactions in the subunits of ribonuclease P in the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci Biotechnol Biochem 69:1209-1212
    • (2005) Biosci Biotechnol Biochem , vol.69 , pp. 1209-1212
    • Kifusa, M.1    Fukuhara, H.2    Hayashi, T.3    Kimura, M.4
  • 44
    • 33847784925 scopus 로고    scopus 로고
    • Eukaryotic RNase P RNA mediates cleavage in the absence of protein
    • Kikovska E, Svard SG, Kirsebom LA (2007) Eukaryotic RNase P RNA mediates cleavage in the absence of protein. Proc Natl Acad Sci USA 104:2062-2067
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 2062-2067
    • Kikovska, E.1    Svard, S.G.2    Kirsebom, L.A.3
  • 45
    • 0027973546 scopus 로고
    • Base pairing between Escherichia coli RNase P RNA and its substrate
    • Kirsebom LA, Svard SG (1994) Base pairing between Escherichia coli RNase P RNA and its substrate. EMBO J 13:4870-4876
    • (1994) EMBO J , vol.13 , pp. 4870-4876
    • Kirsebom, L.A.1    Svard, S.G.2
  • 46
    • 34848863932 scopus 로고    scopus 로고
    • RNase P RNA mediated cleavage: Substrate recognition and catalysis
    • Kirsebom LA (2007) RNase P RNA mediated cleavage: substrate recognition and catalysis. Biochimie 89:1183-1194
    • (2007) Biochimie , vol.89 , pp. 1183-1194
    • Kirsebom, L.A.1
  • 47
    • 0034745504 scopus 로고    scopus 로고
    • Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparativegenomic approach
    • Koonin EV, Wolf YI, Aravind L (2001) Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparativegenomic approach. Genome Res 11:240-252
    • (2001) Genome Res , vol.11 , pp. 240-252
    • Koonin, E.V.1    Wolf, Y.I.2    Aravind, L.3
  • 49
    • 6044275739 scopus 로고    scopus 로고
    • Basis for structural diversity in homologous RNAs
    • Krasilnikov AS, Xiao Y, Pan T, Mondragon A (2004) Basis for structural diversity in homologous RNAs. Science 306:104-107
    • (2004) Science , vol.306 , pp. 104-107
    • Krasilnikov, A.S.1    Xiao, Y.2    Pan, T.3    Mondragon, A.4
  • 50
    • 0037199416 scopus 로고    scopus 로고
    • The affinity of magnesium binding sites in the Bacillus subtilis RNase P x pre-tRNA complex is enhanced by the protein subunit
    • Kurz JC, Fierke CA (2002) The affinity of magnesium binding sites in the Bacillus subtilis RNase P x pre-tRNA complex is enhanced by the protein subunit. Biochemistry 41:9545-9558
    • (2002) Biochemistry , vol.41 , pp. 9545-9558
    • Kurz, J.C.1    Fierke, C.A.2
  • 51
    • 0027179962 scopus 로고
    • Characterization of the RNase P RNA of Sulfolobus acidocaldarius
    • LaGrandeur TE, Darr SC, Haas ES, Pace NR (1993) Characterization of the RNase P RNA of Sulfolobus acidocaldarius. J Bacteriol 175:5043-5048
    • (1993) J Bacteriol , vol.175 , pp. 5043-5048
    • Lagrandeur, T.E.1    Darr, S.C.2    Haas, E.S.3    Pace, N.R.4
  • 54
    • 33749031257 scopus 로고    scopus 로고
    • Extremolytes: Natural compounds from extremophiles for versatile applications
    • Lentzen G, Schwarz T (2006) Extremolytes: Natural compounds from extremophiles for versatile applications. Appl Microbiol Biotechnol 72:623-634
    • (2006) Appl Microbiol Biotechnol , vol.72 , pp. 623-634
    • Lentzen, G.1    Schwarz, T.2
  • 55
    • 58549095469 scopus 로고    scopus 로고
    • Minor changes largely restore catalytic activity of archaeal RNase P RNA from Methanothermobacter thermoautotrophicus
    • Li D, Willkomm DK, Hartmann RK (2009) Minor changes largely restore catalytic activity of archaeal RNase P RNA from Methanothermobacter thermoautotrophicus. Nucleic Acids Res 37(1):231-242
    • (2009) Nucleic Acids Res , vol.37 , Issue.1 , pp. 231-242
    • Li, D.1    Willkomm, D.K.2    Hartmann, R.K.3
  • 56
    • 4644225942 scopus 로고    scopus 로고
    • In search of RNase P RNA from microbial genomes
    • Li Y, Altman S (2004) In search of RNase P RNA from microbial genomes. RNA 10:1533-1540
    • (2004) RNA , vol.10 , pp. 1533-1540
    • Li, Y.1    Altman, S.2
  • 57
    • 0029949699 scopus 로고    scopus 로고
    • Domain structure of the ribozyme from eubacterial ribonuclease P
    • Loria A, Pan T (1996) Domain structure of the ribozyme from eubacterial ribonuclease P. RNA 2:551-563
    • (1996) RNA , vol.2 , pp. 551-563
    • Loria, A.1    Pan, T.2
  • 58
    • 0242266622 scopus 로고    scopus 로고
    • Eukaryotic RNase P: Role of RNA and protein subunits of a primordial catalytic ribonucleoprotein in RNA-based catalysis
    • Mann H, Ben-Asouli Y, Schein A, Moussa S, Jarrous N (2003) Eukaryotic RNase P: role of RNA and protein subunits of a primordial catalytic ribonucleoprotein in RNA-based catalysis. Mol Cell 12:925-935
    • (2003) Mol Cell , vol.12 , pp. 925-935
    • Mann, H.1    Ben-Asouli, Y.2    Schein, A.3    Moussa, S.4    Jarrous, N.5
  • 59
    • 77953423025 scopus 로고    scopus 로고
    • A structural analysis of ribonuclease P
    • Lilley DMJ, Eckstein F (eds) . RSC Publishing, Cambridge
    • Marquez SM, Evans D, Kazantsev AV, Pace NR (2008) A structural analysis of ribonuclease P. In: Lilley DMJ, Eckstein F (eds) Ribozymes and RNA catalysis. RSC Publishing, Cambridge, pp 153-177
    • (2008) Ribozymes and RNA Catalysis , pp. 153-177
    • Marquez, S.M.1    Evans, D.2    Kazantsev, A.V.3    Pace, N.R.4
  • 60
    • 0032546728 scopus 로고    scopus 로고
    • Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis
    • Massire C, Jaeger L, Westhof E (1998) Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis. J Mol Biol 279:773-793
    • (1998) J Mol Biol , vol.279 , pp. 773-793
    • Massire, C.1    Jaeger, L.2    Westhof, E.3
  • 61
    • 0025992792 scopus 로고
    • The RNA component of RNase P from the archaebacterium Haloferax volcanii
    • Nieuwlandt DT, Haas ES, Daniels CJ (1991) The RNA component of RNase P from the archaebacterium Haloferax volcanii. J Biol Chem 266:5689-5695
    • (1991) J Biol Chem , vol.266 , pp. 5689-5695
    • Nieuwlandt, D.T.1    Haas, E.S.2    Daniels, C.J.3
  • 62
    • 0032417685 scopus 로고    scopus 로고
    • Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA
    • Niranjanakumari S, Stams T, Crary SM, Christianson DW, Fierke CA (1998) Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA. Proc Natl Acad Sci USA 95:15212-15217
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 15212-15217
    • Niranjanakumari, S.1    Stams, T.2    Crary, S.M.3    Christianson, D.W.4    Fierke, C.A.5
  • 63
    • 4344638194 scopus 로고    scopus 로고
    • Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: An archaeal homolog of eukaryotic ribonuclease P protein Rpp 29
    • Numata T, Ishimatsu I, Kakuta Y, Tanaka I, Kimura M (2004) Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: an archaeal homolog of eukaryotic ribonuclease P protein Rpp 29. RNA 10:1423-1432
    • (2004) RNA , vol.10 , pp. 1423-1432
    • Numata, T.1    Ishimatsu, I.2    Kakuta, Y.3    Tanaka, I.4    Kimura, M.5
  • 64
    • 0028131972 scopus 로고
    • Interaction of the 3¢-end of tRNA with ribonuclease P RNA
    • Oh BK, Pace NR (1994) Interaction of the 3¢-end of tRNA with ribonuclease P RNA. Nucleic Acids Res 22:4087-4094
    • (1994) Nucleic Acids Res , vol.22 , pp. 4087-4094
    • Oh, B.K.1    Pace, N.R.2
  • 65
    • 0029556990 scopus 로고
    • Probing of tertiary interactions in RNA: 2¢-hydroxyl-base contacts between the RNase P RNA and pre-tRNA
    • Pan T, Loria A, Zhong K (1995) Probing of tertiary interactions in RNA: 2¢-hydroxyl-base contacts between the RNase P RNA and pre-tRNA. Proc Natl Acad Sci USA 92:12510-12514
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 12510-12514
    • Pan, T.1    Loria, A.2    Zhong, K.3
  • 67
    • 47249122660 scopus 로고    scopus 로고
    • Studies on Methanocaldococcus jannaschii RNase P reveal insights into the roles of RNA and protein cofactors in RNase P catalysis
    • Pulukkunat DK, Gopalan V (2008) Studies on Methanocaldococcus jannaschii RNase P reveal insights into the roles of RNA and protein cofactors in RNase P catalysis. Nucleic Acids Res 36:4172-4180
    • (2008) Nucleic Acids Res , vol.36 , pp. 4172-4180
    • Pulukkunat, D.K.1    Gopalan, V.2
  • 69
    • 0344823672 scopus 로고    scopus 로고
    • NMR structure of an archaeal homologue of ribonuclease P protein Rpp 29
    • Sidote DJ, Hoffman DW (2003) NMR structure of an archaeal homologue of ribonuclease P protein Rpp 29. Biochemistry 42:13541-13550
    • (2003) Biochemistry , vol.42 , pp. 13541-13550
    • Sidote, D.J.1    Hoffman, D.W.2
  • 70
    • 8344266164 scopus 로고    scopus 로고
    • Crystal structure of archaeal ribonuclease P protein aRpp 29 from Archaeoglobus fulgidus
    • Sidote DJ, Heideker J, Hoffman DW (2004) Crystal structure of archaeal ribonuclease P protein aRpp 29 from Archaeoglobus fulgidus. Biochemistry 43:14128-14138
    • (2004) Biochemistry , vol.43 , pp. 14128-14138
    • Sidote, D.J.1    Heideker, J.2    Hoffman, D.W.3
  • 71
    • 0032076249 scopus 로고    scopus 로고
    • Ribonuclease P protein structure: Evolutionary origins in the translational apparatus
    • Stams T, Niranjanakumari S, Fierke CA, Christianson DW (1998) Ribonuclease P protein structure: evolutionary origins in the translational apparatus. Science 280:752-755
    • (1998) Science , vol.280 , pp. 752-755
    • Stams, T.1    Niranjanakumari, S.2    Fierke, C.A.3    Christianson, D.W.4
  • 72
    • 33748361597 scopus 로고    scopus 로고
    • Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P
    • Sun L, Campbell FE, Zahler NH, Harris ME (2006) Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P. EMBO J 25:3998-4007
    • (2006) EMBO J , vol.25 , pp. 3998-4007
    • Sun, L.1    Campbell, F.E.2    Zahler, N.H.3    Harris, M.E.4
  • 73
    • 34548371821 scopus 로고    scopus 로고
    • Evidence that binding of C5 protein to P RNA enhances ribozyme catalysis by influencing active site metal ion affinity
    • Sun L, Harris ME (2007) Evidence that binding of C5 protein to P RNA enhances ribozyme catalysis by influencing active site metal ion affinity. RNA 13:1505-1515
    • (2007) RNA , vol.13 , pp. 1505-1515
    • Sun, L.1    Harris, M.E.2
  • 75
    • 33750377546 scopus 로고    scopus 로고
    • Characterization of the archaeal ribonuclease P proteins from Pyrococcus horikoshii OT3
    • Terada A, Honda T, Fukuhara H, Hada K, Kimura M (2006) Characterization of the archaeal ribonuclease P proteins from Pyrococcus horikoshii OT3. J Biochem 140:293-298
    • (2006) J Biochem , vol.140 , pp. 293-298
    • Terada, A.1    Honda, T.2    Fukuhara, H.3    Hada, K.4    Kimura, M.5
  • 76
    • 36148982232 scopus 로고    scopus 로고
    • Identification of nucleotide residues essential for RNase P activity from the hyperthermophilic archaeon Pyrococcus horikoshii OT3
    • Terada A, Yoshida T, Kimura M (2007) Identification of nucleotide residues essential for RNase P activity from the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci Biotechnol. Biochem. 71:1940-1945
    • (2007) Biosci Biotechnol. Biochem. , vol.71 , pp. 1940-1945
    • Terada, A.1    Yoshida, T.2    Kimura, M.3
  • 77
    • 25644433566 scopus 로고    scopus 로고
    • Crystal structure of the RNA component of bacterial ribonuclease P
    • DOI 10.1038/nature04074, PII N04074
    • Torres-Larios A, Swinger KK, Krasilnikov AS, Pan T, Mondragon A (2005) Crystal structure of the RNA component of bacterial ribonuclease P. Nature 437:584-587 (Pubitemid 41613559)
    • (2005) Nature , vol.437 , Issue.7058 , pp. 584-587
    • Torres-Larios, A.1    Swinger, K.K.2    Krasilnikov, A.S.3    Pan, T.4    Mondragon, A.5
  • 78
    • 0037462929 scopus 로고    scopus 로고
    • Molecular modeling of the threedimensional structure of the bacterial RNase P holoenzyme
    • Tsai HY, Masquida B, Biswas R, Westhof E, Gopalan V (2003) Molecular modeling of the threedimensional structure of the bacterial RNase P holoenzyme. J Mol Biol 325:661-675
    • (2003) J Mol Biol , vol.325 , pp. 661-675
    • Tsai, H.Y.1    Masquida, B.2    Biswas, R.3    Westhof, E.4    Gopalan, V.5
  • 79
    • 33750831489 scopus 로고    scopus 로고
    • Functional reconstitution and characterization of Pyrococcus furiosus RNase P
    • Tsai HY, Pulukkunat DK, Woznick WK, Gopalan V (2006) Functional reconstitution and characterization of Pyrococcus furiosus RNase P. Proc Natl Acad Sci USA 103:16147-16152
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 16147-16152
    • Tsai, H.Y.1    Pulukkunat, D.K.2    Woznick, W.K.3    Gopalan, V.4
  • 81
    • 0023696278 scopus 로고
    • Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli
    • Vioque A, Arnez J, Altman S (1988) Protein-RNA interactions in the RNase P holoenzyme from Escherichia coli. J Mol Biol 202:835-848
    • (1988) J Mol Biol , vol.202 , pp. 835-848
    • Vioque, A.1    Arnez, J.2    Altman, S.3
  • 82
    • 33645747326 scopus 로고    scopus 로고
    • Ribonuclease P: The evolution of an ancient RNA enzyme
    • Walker SC, Engelke DR (2006) Ribonuclease P: the evolution of an ancient RNA enzyme. Crit Rev Biochem Mol Biol 41:77-102
    • (2006) Crit Rev Biochem Mol Biol , vol.41 , pp. 77-102
    • Walker, S.C.1    Engelke, D.R.2
  • 84
    • 21844478112 scopus 로고    scopus 로고
    • Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing
    • Xiao S, Day-Storms JJ, Srisawat C, Fierke CA, Engelke DR (2005) Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing. RNA 11:885-896
    • (2005) RNA , vol.11 , pp. 885-896
    • Xiao, S.1    Day-Storms, J.J.2    Srisawat, C.3    Fierke, C.A.4    Engelke, D.R.5


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