-
1
-
-
0003422388
-
-
WH Freeman and Co, New York
-
Lodish H, Berk A, Zipursky SL, Matsudaira P, Baltimore D, Darnell J: Molecular Cell Biology. 1999, New York: WH Freeman and Co
-
(1999)
Molecular Cell Biology
-
-
Lodish, H.1
Berk, A.2
Zipursky, S.L.3
Matsudaira, P.4
Baltimore, D.5
Darnell, J.6
-
2
-
-
0037381650
-
Regulation of gene expression by histone-like proteins in bacteria
-
PID: 12672495, COI: 1:CAS:528:DC%2BD3sXisV2rtbg%3D
-
Dorman CJ, Deighan P: Regulation of gene expression by histone-like proteins in bacteria. Curr Opin Genet Dev. 2003, 13: 179-184. 10.1016/S0959-437X(03)00025-X. DOI: 10.1016/S0959-437X(03)00025-X
-
(2003)
Curr Opin Genet Dev
, vol.13
, pp. 179-184
-
-
Dorman, C.J.1
Deighan, P.2
-
3
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
PID: 9305837, COI: 1:CAS:528:DyaK2sXmtFGisrc%3D
-
Luger K, Mader AW, Richmond RK, Sargent DF, Richmond TJ: Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature. 1997, 389: 251-260. 10.1038/38444. DOI: 10.1038/38444
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
4
-
-
0034990046
-
Archaeal histones and nucleosomes
-
PID: 11398455, COI: 1:CAS:528:DC%2BD3MXltFensrs%3D
-
Sandman K, Bailey KA, Pereira SL, Soares D, Li WT, Reeve JN: Archaeal histones and nucleosomes. Methods Enzymol. 2001, 334: 116-129. DOI: 10.1016/S0076-6879(01)34462-2
-
(2001)
Methods Enzymol
, vol.334
, pp. 116-129
-
-
Sandman, K.1
Bailey, K.A.2
Pereira, S.L.3
Soares, D.4
Li, W.T.5
Reeve, J.N.6
-
5
-
-
0036464541
-
Identification, cloning and characterization of a new DNA-binding protein from the hyperthermophilic methanogen Methanopyrus kandleri
-
PID: 11809880, COI: 1:CAS:528:DC%2BD38XhsVyhtro%3D
-
Pavlov NA, Cherny DI, Nazimov IV, Slesarev AI, Subramaniam V: Identification, cloning and characterization of a new DNA-binding protein from the hyperthermophilic methanogen Methanopyrus kandleri. Nucleic Acids Res. 2002, 30: 685-694. 10.1093/nar/30.3.685. DOI: 10.1093/nar/30.3.685
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 685-694
-
-
Pavlov, N.A.1
Cherny, D.I.2
Nazimov, I.V.3
Slesarev, A.I.4
Subramaniam, V.5
-
6
-
-
0036890204
-
Holding it together: chromatin in the Archaea
-
PID: 12446147, COI: 1:CAS:528:DC%2BD38XoslCgu7c%3D
-
White MF, Bell SD: Holding it together: chromatin in the Archaea. Trends Genet. 2002, 18: 621-626. 10.1016/S0168-9525(02)02808-1. DOI: 10.1016/S0168-9525(02)02808-1
-
(2002)
Trends Genet
, vol.18
, pp. 621-626
-
-
White, M.F.1
Bell, S.D.2
-
7
-
-
0030922584
-
Structure of the chromatin binding (chromo) domain from mouse modifier protein 1
-
PID: 9171360, COI: 1:CAS:528:DyaK2sXjsV2ms7Y%3D
-
Ball LJ, Murzina NV, Broadhurst RW, Raine AR, Archer SJ, Stott FJ, Murzin AG, Singh PB, Domaille PJ, Laue ED: Structure of the chromatin binding (chromo) domain from mouse modifier protein 1. EMBO J. 1997, 16: 2473-2481. 10.1093/emboj/16.9.2473. DOI: 10.1093/emboj/16.9.2473
-
(1997)
EMBO J
, vol.16
, pp. 2473-2481
-
-
Ball, L.J.1
Murzina, N.V.2
Broadhurst, R.W.3
Raine, A.R.4
Archer, S.J.5
Stott, F.J.6
Murzin, A.G.7
Singh, P.B.8
Domaille, P.J.9
Laue, E.D.10
-
8
-
-
0037023326
-
The interaction of Alba, a conserved archaeal chromatin protein, with Sir2 and its regulation by acetylation
-
PID: 11935028, COI: 1:CAS:528:DC%2BD38XivVWjsL0%3D
-
Bell SD, Botting CH, Wardleworth BN, Jackson SP, White MF: The interaction of Alba, a conserved archaeal chromatin protein, with Sir2 and its regulation by acetylation. Science. 2002, 296: 148-151. 10.1126/science.1070506. DOI: 10.1126/science.1070506
-
(2002)
Science
, vol.296
, pp. 148-151
-
-
Bell, S.D.1
Botting, C.H.2
Wardleworth, B.N.3
Jackson, S.P.4
White, M.F.5
-
9
-
-
0033917479
-
An abundant DNA binding protein from the hyperthermophilic archaeon Sulfolobus shibatae affects DNA supercoiling in a temperature-dependent fashion
-
PID: 10869069, COI: 1:CAS:528:DC%2BD3cXksFyms7c%3D
-
Xue H, Guo R, Wen Y, Liu D, Huang L: An abundant DNA binding protein from the hyperthermophilic archaeon Sulfolobus shibatae affects DNA supercoiling in a temperature-dependent fashion. J Bacteriol. 2000, 182: 3929-3933. 10.1128/JB.182.14.3929-3933.2000. DOI: 10.1128/JB.182.14.3929-3933.2000
-
(2000)
J Bacteriol
, vol.182
, pp. 3929-3933
-
-
Xue, H.1
Guo, R.2
Wen, Y.3
Liu, D.4
Huang, L.5
-
10
-
-
0032961053
-
Identification of the gene encoding archeal-specific DNA-binding proteins of the Sac10b family
-
PID: 10320587, COI: 1:CAS:528:DyaK1MXjs1emtro%3D
-
Forterre P, Confalonieri F, Knapp S: Identification of the gene encoding archeal-specific DNA-binding proteins of the Sac10b family. Mol Microbiol. 1999, 32: 669-670. 10.1046/j.1365-2958.1999.01366.x. DOI: 10.1046/j.1365-2958.1999.01366.x
-
(1999)
Mol Microbiol
, vol.32
, pp. 669-670
-
-
Forterre, P.1
Confalonieri, F.2
Knapp, S.3
-
11
-
-
0038168161
-
Structure of a Sir2 substrate, Alba, reveals a mechanism for deactylation-induced enhancement of DNA-binding
-
PID: 12730210, COI: 1:CAS:528:DC%2BD3sXlt1Clt7o%3D
-
Zhao K, Chai X, Marmorstein R: Structure of a Sir2 substrate, Alba, reveals a mechanism for deactylation-induced enhancement of DNA-binding. J Biol Chem. 2003, 278: 26071-26077. 10.1074/jbc.M303666200. DOI: 10.1074/jbc.M303666200
-
(2003)
J Biol Chem
, vol.278
, pp. 26071-26077
-
-
Zhao, K.1
Chai, X.2
Marmorstein, R.3
-
12
-
-
0037009516
-
Structure of Alba: an archaeal chromatin protein modulated by acetylation
-
PID: 12198167, COI: 1:CAS:528:DC%2BD38Xms1Kmsrc%3D
-
Wardleworth BN, Russell RJ, Bell SD, Taylor GL, White MF: Structure of Alba: an archaeal chromatin protein modulated by acetylation. EMBO J. 2002, 21: 4654-4662. 10.1093/emboj/cdf465. DOI: 10.1093/emboj/cdf465
-
(2002)
EMBO J
, vol.21
, pp. 4654-4662
-
-
Wardleworth, B.N.1
Russell, R.J.2
Bell, S.D.3
Taylor, G.L.4
White, M.F.5
-
13
-
-
0034127111
-
Growth phase-dependent expression and degradation of histones in the thermophilic archaeon Thermococcus zilligii
-
PID: 10844675, COI: 1:CAS:528:DC%2BD3cXktVCruro%3D
-
Dinger ME, Baillie GJ, Musgrave DR: Growth phase-dependent expression and degradation of histones in the thermophilic archaeon Thermococcus zilligii. Mol Microbiol. 2000, 36: 876-885. 10.1046/j.1365-2958.2000.01904.x. DOI: 10.1046/j.1365-2958.2000.01904.x
-
(2000)
Mol Microbiol
, vol.36
, pp. 876-885
-
-
Dinger, M.E.1
Baillie, G.J.2
Musgrave, D.R.3
-
15
-
-
0032499692
-
Rpp2, an essential protein subunit of nuclear RNase P, is required for processing of precursor tRNAs and 35S precursor rRNA in Saccharomyces cerevisiae
-
PID: 9618478, COI: 1:CAS:528:DyaK1cXjslyntLY%3D
-
Stolc V, Katz A, Altman S: Rpp2, an essential protein subunit of nuclear RNase P, is required for processing of precursor tRNAs and 35S precursor rRNA in Saccharomyces cerevisiae. Proc Natl Acad Sci USA. 1998, 95: 6716-6721. 10.1073/pnas.95.12.6716. DOI: 10.1073/pnas.95.12.6716
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 6716-6721
-
-
Stolc, V.1
Katz, A.2
Altman, S.3
-
16
-
-
2642635832
-
Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP
-
PID: 9620854, COI: 1:CAS:528:DyaK1cXjslOjtb4%3D
-
Chamberlain JR, Lee Y, Lane WS, Engelke DR: Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP. Genes Dev. 1998, 12: 1678-1690. DOI: 10.1101/gad.12.11.1678
-
(1998)
Genes Dev
, vol.12
, pp. 1678-1690
-
-
Chamberlain, J.R.1
Lee, Y.2
Lane, W.S.3
Engelke, D.R.4
-
17
-
-
0030614558
-
Characterization of two scleroderma autoimmune antigens that copurify with human ribonuclease P
-
PID: 9037013, COI: 1:CAS:528:DyaK2sXhtlGitL8%3D
-
Eder PS, Kekuda R, Stolc V, Altman S: Characterization of two scleroderma autoimmune antigens that copurify with human ribonuclease P. Proc Natl Acad Sci USA. 1997, 94: 1101-1106. 10.1073/pnas.94.4.1101. DOI: 10.1073/pnas.94.4.1101
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 1101-1106
-
-
Eder, P.S.1
Kekuda, R.2
Stolc, V.3
Altman, S.4
-
18
-
-
0036223840
-
Purification and characterization of Rpp25, an RNA-binding protein subunit of human ribonuclease P
-
PID: 12003489, COI: 1:CAS:528:DC%2BD38Xjt1eht7g%3D
-
Guerrier-Takada C, Eder PS, Gopalan V, Altman S: Purification and characterization of Rpp25, an RNA-binding protein subunit of human ribonuclease P. RNA. 2002, 8: 290-295. 10.1017/S1355838202027954. DOI: 10.1017/S1355838202027954
-
(2002)
RNA
, vol.8
, pp. 290-295
-
-
Guerrier-Takada, C.1
Eder, P.S.2
Gopalan, V.3
Altman, S.4
-
19
-
-
0037107344
-
A PIWI homolog is one of the proteins expressed exclusively during macronuclear development in the ciliate Stylonychia lemnae
-
PID: 12384584, COI: 1:CAS:528:DC%2BD38Xot1Cisrs%3D
-
Fetzer CP, Hogan DJ, Lipps HJ: A PIWI homolog is one of the proteins expressed exclusively during macronuclear development in the ciliate Stylonychia lemnae. Nucleic Acids Res. 2002, 30: 4380-4386. 10.1093/nar/gkf579. DOI: 10.1093/nar/gkf579
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 4380-4386
-
-
Fetzer, C.P.1
Hogan, D.J.2
Lipps, H.J.3
-
20
-
-
0037423758
-
Solution structure of the R3H domain from human Smubp-2
-
PID: 12547203, COI: 1:CAS:528:DC%2BD3sXlt12gtQ%3D%3D
-
Liepinsh E, Leonchiks A, Sharipo A, Guignard L, Otting G: Solution structure of the R3H domain from human Smubp-2. J Mol Biol. 2003, 326: 217-223. 10.1016/S0022-2836(02)01381-5. DOI: 10.1016/S0022-2836(02)01381-5
-
(2003)
J Mol Biol
, vol.326
, pp. 217-223
-
-
Liepinsh, E.1
Leonchiks, A.2
Sharipo, A.3
Guignard, L.4
Otting, G.5
-
21
-
-
0034282792
-
Crystal structure of a eukaryote/archaeon-like protyl-tRNA synthetase and its complex with tRNAPro(CGG)
-
PID: 10970866, COI: 1:CAS:528:DC%2BD3cXmslGrsrs%3D
-
Yaremchuk A, Cusack S, Tukalo M: Crystal structure of a eukaryote/archaeon-like protyl-tRNA synthetase and its complex with tRNAPro(CGG). EMBO J. 2000, 19: 4745-4758. 10.1093/emboj/19.17.4745. DOI: 10.1093/emboj/19.17.4745
-
(2000)
EMBO J
, vol.19
, pp. 4745-4758
-
-
Yaremchuk, A.1
Cusack, S.2
Tukalo, M.3
-
22
-
-
0035312922
-
THUMP - a predicted RNA-binding domain shared by 4-thiouridine, pseudouridine synthases and RNA methylases
-
PID: 11295541, COI: 1:CAS:528:DC%2BD3MXisF2ntro%3D
-
Aravind L, Koonin EV: THUMP - a predicted RNA-binding domain shared by 4-thiouridine, pseudouridine synthases and RNA methylases. Trends Biochem Sci. 2001, 26: 215-217. 10.1016/S0968-0004(01)01826-6. DOI: 10.1016/S0968-0004(01)01826-6
-
(2001)
Trends Biochem Sci
, vol.26
, pp. 215-217
-
-
Aravind, L.1
Koonin, E.V.2
-
23
-
-
0036529621
-
Comparative genomics and evolution of proteins involved in RNA metabolism
-
PID: 11917006, COI: 1:CAS:528:DC%2BD38XjtFOkur8%3D
-
Anantharaman V, Koonin EV, Aravind L: Comparative genomics and evolution of proteins involved in RNA metabolism. Nucleic Acids Res. 2002, 30: 1427-1464. 10.1093/nar/30.7.1427. DOI: 10.1093/nar/30.7.1427
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1427-1464
-
-
Anantharaman, V.1
Koonin, E.V.2
Aravind, L.3
-
24
-
-
1842832249
-
Crystal structure of E. coliYhbY: a representative of a novel class of RNA binding proteins
-
COI: 1:CAS:528:DC%2BD38XoslGntL8%3D
-
Ostheimer GJ, Barkan A, Matthews BW: Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins. Structure (Camb). 2002, 10: 1593-1601. 10.1016/S0969-2126(02)00886-9. DOI: 10.1016/S0969-2126(02)00886-9
-
(2002)
Structure (Camb)
, vol.10
, pp. 1593-1601
-
-
Ostheimer, G.J.1
Barkan, A.2
Matthews, B.W.3
-
25
-
-
0037110588
-
Structure of HI1333 (YhbY), a putative RNA-binding protein from Haemophilus influenzae
-
PID: 12360533, COI: 1:CAS:528:DC%2BD38XosV2isbc%3D
-
Willis MA, Krajewski W, Chalamasetty VR, Reddy P, Howard A, Herzberg O: Structure of HI1333 (YhbY), a putative RNA-binding protein from Haemophilus influenzae. Proteins. 2002, 49: 423-426. 10.1002/prot.10225. DOI: 10.1002/prot.10225
-
(2002)
Proteins
, vol.49
, pp. 423-426
-
-
Willis, M.A.1
Krajewski, W.2
Chalamasetty, V.R.3
Reddy, P.4
Howard, A.5
Herzberg, O.6
-
26
-
-
0034844560
-
CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin
-
PID: 11565746, COI: 1:CAS:528:DC%2BD3MXmvFWisLw%3D
-
Till B, Schmitz-Linneweber C, Williams-Carrier R, Barkan A: CRS1 is a novel group II intron splicing factor that was derived from a domain of ancient origin. RNA. 2001, 7: 1227-1238. 10.1017/S1355838201010445. DOI: 10.1017/S1355838201010445
-
(2001)
RNA
, vol.7
, pp. 1227-1238
-
-
Till, B.1
Schmitz-Linneweber, C.2
Williams-Carrier, R.3
Barkan, A.4
-
27
-
-
0036803105
-
Nucleosome-like complex of the histone from the hyperthermophile Methanopyrus kandleri(MkaH) with linear DNA
-
PID: 12354072, COI: 1:CAS:528:DC%2BD38Xos1Ckt78%3D
-
Pavlov NA, Cherny DI, Jovin TM, Slesarev AI: Nucleosome-like complex of the histone from the hyperthermophile Methanopyrus kandleri (MkaH) with linear DNA. J Biomol Struct Dyn. 2002, 20: 207-214. DOI: 10.1080/07391102.2002.10506836
-
(2002)
J Biomol Struct Dyn
, vol.20
, pp. 207-214
-
-
Pavlov, N.A.1
Cherny, D.I.2
Jovin, T.M.3
Slesarev, A.I.4
-
28
-
-
0026740718
-
Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box
-
PID: 1628625, COI: 1:CAS:528:DyaK3sXisV2qtb0%3D
-
Kiledjian M, Dreyfuss G: Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box. EMBO J. 1992, 11: 2655-2664.
-
(1992)
EMBO J
, vol.11
, pp. 2655-2664
-
-
Kiledjian, M.1
Dreyfuss, G.2
-
29
-
-
0025857630
-
Glycine loops in proteins: their occurrence in certain intermediate filament chains, loricrins and single-stranded RNA binding proteins
-
PID: 1716976, COI: 1:CAS:528:DyaK3MXltVylt7w%3D
-
Steinert PM, Mack JW, Korge BP, Gan SQ, Haynes SR, Steven AC: Glycine loops in proteins: their occurrence in certain intermediate filament chains, loricrins and single-stranded RNA binding proteins. Int J Biol Macromol. 1991, 13: 130-139. 10.1016/0141-8130(91)90037-U. DOI: 10.1016/0141-8130(91)90037-U
-
(1991)
Int J Biol Macromol
, vol.13
, pp. 130-139
-
-
Steinert, P.M.1
Mack, J.W.2
Korge, B.P.3
Gan, S.Q.4
Haynes, S.R.5
Steven, A.C.6
-
30
-
-
0035900649
-
Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function
-
PID: 11719189, COI: 1:CAS:528:DC%2BD3MXovVCnsL0%3D
-
Darnell JC, Jensen KB, Jin P, Brown V, Warren ST, Darnell RB: Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function. Cell. 2001, 107: 489-499. DOI: 10.1016/S0092-8674(01)00566-9
-
(2001)
Cell
, vol.107
, pp. 489-499
-
-
Darnell, J.C.1
Jensen, K.B.2
Jin, P.3
Brown, V.4
Warren, S.T.5
Darnell, R.B.6
-
31
-
-
0028957320
-
In vivo and in vitroarginine methylation of RNA-binding proteins
-
PID: 7739561, COI: 1:CAS:528:DyaK2MXltFagtb0%3D
-
Liu Q, Dreyfuss G: In vivo and in vitro arginine methylation of RNA-binding proteins. Mol Cell Biol. 1995, 15: 2800-2808. DOI: 10.1128/MCB.15.5.2800
-
(1995)
Mol Cell Biol
, vol.15
, pp. 2800-2808
-
-
Liu, Q.1
Dreyfuss, G.2
-
32
-
-
0037145031
-
Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena
-
PID: 12297043, COI: 1:CAS:528:DC%2BD38XnsFKis7o%3D
-
Mochizuki K, Fine NA, Fujisawa T, Gorovsky MA: Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena. Cell. 2002, 110: 689-699. DOI: 10.1016/S0092-8674(02)00909-1
-
(2002)
Cell
, vol.110
, pp. 689-699
-
-
Mochizuki, K.1
Fine, N.A.2
Fujisawa, T.3
Gorovsky, M.A.4
-
33
-
-
17344375178
-
RNA silencing
-
PID: 11839284, COI: 1:CAS:528:DC%2BD38XhtlGgurw%3D
-
Baulcombe D: RNA silencing. Curr Biol. 2002, 12: R82-R84. 10.1016/S0960-9822(02)00665-6. DOI: 10.1016/S0960-9822(02)00665-6
-
(2002)
Curr Biol
, vol.12
, pp. R82-R84
-
-
Baulcombe, D.1
-
34
-
-
0034745504
-
Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparative-genomic approach
-
PID: 11157787, COI: 1:CAS:528:DC%2BD3MXht1GqtLs%3D
-
Koonin EV, Wolf YI, Aravind L: Prediction of the archaeal exosome and its connections with the proteasome and the translation and transcription machineries by a comparative-genomic approach. Genome Res. 2001, 11: 240-252. 10.1101/gr.162001. DOI: 10.1101/gr.162001
-
(2001)
Genome Res
, vol.11
, pp. 240-252
-
-
Koonin, E.V.1
Wolf, Y.I.2
Aravind, L.3
-
35
-
-
0036601353
-
Trends in protein evolution inferred from sequence and structure analysis
-
PID: 12127460, COI: 1:CAS:528:DC%2BD38Xlt1Shs78%3D
-
Aravind L, Mazumder R, Vasudevan S, Koonin EV: Trends in protein evolution inferred from sequence and structure analysis. Curr Opin Struct Biol. 2002, 12: 392-399. 10.1016/S0959-440X(02)00334-2. DOI: 10.1016/S0959-440X(02)00334-2
-
(2002)
Curr Opin Struct Biol
, vol.12
, pp. 392-399
-
-
Aravind, L.1
Mazumder, R.2
Vasudevan, S.3
Koonin, E.V.4
-
36
-
-
0024283673
-
Characterization of the chromosomal protein MC1 from the thermophilic archaebacterium Methanosarcinasp. CHTI 55 and its effect on the thermal stability of DNA
-
PID: 3142520, COI: 1:CAS:528:DyaL1MXjsFKjtw%3D%3D
-
Chartier F, Laine B, Sautiere P: Characterization of the chromosomal protein MC1 from the thermophilic archaebacterium Methanosarcina sp. CHTI 55 and its effect on the thermal stability of DNA. Biochim Biophys Acta. 1988, 951: 149-156. 10.1016/0167-4781(88)90035-8. DOI: 10.1016/0167-4781(88)90035-8
-
(1988)
Biochim Biophys Acta
, vol.951
, pp. 149-156
-
-
Chartier, F.1
Laine, B.2
Sautiere, P.3
-
37
-
-
0013550357
-
DNA bending induced by the archaebacterial histone-like protein MC1
-
PID: 9887264, COI: 1:STN:280:DyaK1M7ktFelsg%3D%3D
-
Cam EL, Culard F, Larquet E, Delain E, Cognet JA: DNA bending induced by the archaebacterial histone-like protein MC1. J Mol Biol. 1999, 285: 1011-1021. 10.1006/jmbi.1998.2321. DOI: 10.1006/jmbi.1998.2321
-
(1999)
J Mol Biol
, vol.285
, pp. 1011-1021
-
-
Cam, E.L.1
Culard, F.2
Larquet, E.3
Delain, E.4
Cognet, J.A.5
-
38
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
PID: 9254694, COI: 1:CAS:528:DyaK2sXlvFyhu7w%3D
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25: 3389-3402. 10.1093/nar/25.17.3389. DOI: 10.1093/nar/25.17.3389
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
39
-
-
0030623948
-
SEALS: a system for easy analysis of lots of sequences
-
PID: 9322058, COI: 1:STN:280:DyaK2svmtlaktg%3D%3D
-
Walker DR, Koonin EV: SEALS: a system for easy analysis of lots of sequences. Proc Int Conf Intell Syst Mol Biol. 1997, 5: 333-339.
-
(1997)
Proc Int Conf Intell Syst Mol Biol
, vol.5
, pp. 333-339
-
-
Walker, D.R.1
Koonin, E.V.2
-
40
-
-
85182695703
-
-
SEALS. [http://www.ncbi.nlm.nih.gov/CBBresearch/Walker/SEALS/index.html]
-
SEALS.
-
-
-
41
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
PID: 10964570, COI: 1:CAS:528:DC%2BD3cXmtVGntr8%3D
-
Notredame C, Higgins DG, Heringa J: T-Coffee: A novel method for fast and accurate multiple sequence alignment. J Mol Biol. 2000, 302: 205-217. 10.1006/jmbi.2000.4042. DOI: 10.1006/jmbi.2000.4042
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
43
-
-
0036139211
-
MEGA2: molecular evolutionary genetics analysis software
-
PID: 11751241, COI: 1:CAS:528:DC%2BD38XmtVCktQ%3D%3D
-
Kumar S, Tamura K, Jakobsen IB, Nei M: MEGA2: molecular evolutionary genetics analysis software. Bioinformatics. 2001, 17: 1244-1245. 10.1093/bioinformatics/17.12.1244. DOI: 10.1093/bioinformatics/17.12.1244
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
44
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
PID: 11524383, COI: 1:STN:280:DC%2BD3MvotV2isw%3D%3D
-
Huelsenbeck JP, Ronquist F: MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 2001, 17: 754-755. 10.1093/bioinformatics/17.8.754. DOI: 10.1093/bioinformatics/17.8.754
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
45
-
-
0348044549
-
Genome trees constructed using five different approaches suggest new major bacterial clades
-
PID: 11734060, COI: 1:STN:280:DC%2BD3srgs1Wruw%3D%3D
-
Wolf YI, Rogozin IB, Grishin NV, Tatusov RL, Koonin EV: Genome trees constructed using five different approaches suggest new major bacterial clades. BMC Evol Biol. 2001, 1: 8-10.1186/1471-2148-1-8. DOI: 10.1186/1471-2148-1-8
-
(2001)
BMC Evol Biol
, vol.1
, pp. 8
-
-
Wolf, Y.I.1
Rogozin, I.B.2
Grishin, N.V.3
Tatusov, R.L.4
Koonin, E.V.5
-
46
-
-
0029901637
-
Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods
-
PID: 8743697, COI: 1:CAS:528:DyaK28Xltl2nt7g%3D
-
Felsenstein J: Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods. Methods Enzymol. 1996, 266: 418-427. DOI: 10.1016/S0076-6879(96)66026-1
-
(1996)
Methods Enzymol
, vol.266
, pp. 418-427
-
-
Felsenstein, J.1
-
47
-
-
0025873443
-
On the maximum likelihood method in molecular phylogenetics
-
PID: 1904100, COI: 1:CAS:528:DyaK3MXit1GitLw%3D
-
Hasegawa M, Kishino H, Saitou N: On the maximum likelihood method in molecular phylogenetics. J Mol Evol. 1991, 32: 443-445. DOI: 10.1007/BF02101285
-
(1991)
J Mol Evol
, vol.32
, pp. 443-445
-
-
Hasegawa, M.1
Kishino, H.2
Saitou, N.3
-
48
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling
-
PID: 9504803, COI: 1:CAS:528:DyaK1cXhvFaks70%3D
-
Guex N, Peitsch MC: SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis. 1997, 18: 2714-2723. DOI: 10.1002/elps.1150181505
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
49
-
-
0031865006
-
Touring protein fold space with Dali/FSSP
-
PID: 9399863, COI: 1:CAS:528:DyaK1cXovVChsQ%3D%3D
-
Holm L, Sander C: Touring protein fold space with Dali/FSSP. Nucleic Acids Res. 1998, 26: 316-319. 10.1093/nar/26.1.316. DOI: 10.1093/nar/26.1.316
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 316-319
-
-
Holm, L.1
Sander, C.2
-
50
-
-
0029936121
-
Surprising similarities in structure comparison
-
PID: 8804824, COI: 1:CAS:528:DyaK28XjvFSgsLg%3D
-
Gibrat JF, Madej T, Bryant SH: Surprising similarities in structure comparison. Curr Opin Struct Biol. 1996, 6: 377-385. 10.1016/S0959-440X(96)80058-3. DOI: 10.1016/S0959-440X(96)80058-3
-
(1996)
Curr Opin Struct Biol
, vol.6
, pp. 377-385
-
-
Gibrat, J.F.1
Madej, T.2
Bryant, S.H.3
-
51
-
-
0026244229
-
MOLSCRIPT: A Program to Produce Both Detailed and Schematic Plots of Protein Structures
-
Kraulis PJ: MOLSCRIPT: A Program to Produce Both Detailed and Schematic Plots of Protein Structures. Journal of App Crystallography. 1991, 24: 946-950. 10.1107/S0021889891004399. DOI: 10.1107/S0021889891004399
-
(1991)
Journal of App Crystallography
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
|