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Volumn 10, Issue , 2010, Pages

A highly conserved gene island of three genes on chromosome 3B of hexaploid wheat: Diverse gene function and genomic structure maintained in a tightly linked block

Author keywords

[No Author keywords available]

Indexed keywords

BRACHYPODIUM; BRACHYPODIUM DISTACHYON; ORYZA SATIVA; SORGHUM BICOLOR; TRITICUM AESTIVUM; ZEA MAYS;

EID: 77952701365     PISSN: None     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/1471-2229-10-98     Document Type: Article
Times cited : (13)

References (82)
  • 3
    • 12844272411 scopus 로고    scopus 로고
    • A detailed look at 7 million years of genome evolution in a 439 kb contiguous sequence at the barley Hv-eIF4E locus: recombination, rearrangements and repeats
    • 10.1111/j.1365-313X.2004.02285.x, 15634196
    • Wicker T, Zimmermann W, Perovic D, Paterson AH, Ganal M, Graner A, Stein N. A detailed look at 7 million years of genome evolution in a 439 kb contiguous sequence at the barley Hv-eIF4E locus: recombination, rearrangements and repeats. Plant J 2005, 41:184-194. 10.1111/j.1365-313X.2004.02285.x, 15634196.
    • (2005) Plant J , vol.41 , pp. 184-194
    • Wicker, T.1    Zimmermann, W.2    Perovic, D.3    Paterson, A.H.4    Ganal, M.5    Graner, A.6    Stein, N.7
  • 5
    • 58149344008 scopus 로고    scopus 로고
    • Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat
    • 10.1534/genetics.108.092304, 2567357, 18780739
    • Charles M, Belcram H, Just J, Huneau C, Viollet A, Couloux A, Segurens B, Carter M, Huteau V, Coriton O, et al. Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat. Genetics 2008, 180:1071-1086. 10.1534/genetics.108.092304, 2567357, 18780739.
    • (2008) Genetics , vol.180 , pp. 1071-1086
    • Charles, M.1    Belcram, H.2    Just, J.3    Huneau, C.4    Viollet, A.5    Couloux, A.6    Segurens, B.7    Carter, M.8    Huteau, V.9    Coriton, O.10
  • 6
    • 0035106055 scopus 로고    scopus 로고
    • Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes
    • 10.1104/pp.125.3.1342, 65613, 11244114
    • Dubcovsky J, Ramakrishna W, SanMiguel PJ, Busso CS, Yan L, Shiloff BA, Bennetzen JL. Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes. Plant Physiol 2001, 125:1342-1353. 10.1104/pp.125.3.1342, 65613, 11244114.
    • (2001) Plant Physiol , vol.125 , pp. 1342-1353
    • Dubcovsky, J.1    Ramakrishna, W.2    SanMiguel, P.J.3    Busso, C.S.4    Yan, L.5    Shiloff, B.A.6    Bennetzen, J.L.7
  • 7
    • 30044440641 scopus 로고    scopus 로고
    • Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat
    • 10.1073/pnas.0509473102, 1323192, 16357197
    • Devos KM, Ma J, Pontaroli AC, Pratt LH, Bennetzen JL. Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat. Proc Natl Acad Sci USA 2005, 102:19243-19248. 10.1073/pnas.0509473102, 1323192, 16357197.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 19243-19248
    • Devos, K.M.1    Ma, J.2    Pontaroli, A.C.3    Pratt, L.H.4    Bennetzen, J.L.5
  • 8
    • 34347399464 scopus 로고    scopus 로고
    • Genome plasticity a key factor in the success of polyploid wheat under domestication
    • 10.1126/science.1143986, 17600208
    • Dubcovsky J, Dvorak J. Genome plasticity a key factor in the success of polyploid wheat under domestication. Science 2007, 316:1862-1866. 10.1126/science.1143986, 17600208.
    • (2007) Science , vol.316 , pp. 1862-1866
    • Dubcovsky, J.1    Dvorak, J.2
  • 12
    • 13244260639 scopus 로고    scopus 로고
    • Comparative organization of wheat homoeologous group 3S and 7L using wheat-rice synteny and identification of potential markers for genes controlling xanthophyll content in wheat
    • 10.1007/s10142-004-0110-5, 15105995
    • Francki M, Carter M, Ryan K, Hunter A, Bellgard M, Appels R. Comparative organization of wheat homoeologous group 3S and 7L using wheat-rice synteny and identification of potential markers for genes controlling xanthophyll content in wheat. Funct Integr Genomics 2004, 4:118-130. 10.1007/s10142-004-0110-5, 15105995.
    • (2004) Funct Integr Genomics , vol.4 , pp. 118-130
    • Francki, M.1    Carter, M.2    Ryan, K.3    Hunter, A.4    Bellgard, M.5    Appels, R.6
  • 13
    • 0035815113 scopus 로고    scopus 로고
    • Evolution of function in protein superfamilies, from a structural perspective
    • 10.1006/jmbi.2001.4513, 11286560
    • Todd AE, Orengo CA, Thornton JM. Evolution of function in protein superfamilies, from a structural perspective. J Mol Biol 2001, 307:1113-1143. 10.1006/jmbi.2001.4513, 11286560.
    • (2001) J Mol Biol , vol.307 , pp. 1113-1143
    • Todd, A.E.1    Orengo, C.A.2    Thornton, J.M.3
  • 14
    • 84907150192 scopus 로고    scopus 로고
    • The map-based sequence of the rice genome
    • 10.1038/nature03895, 16100779, International Rice Genome Sequencing Project
    • International Rice Genome Sequencing Project The map-based sequence of the rice genome. Nature 2005, 436:793-800. 10.1038/nature03895, 16100779, International Rice Genome Sequencing Project.
    • (2005) Nature , vol.436 , pp. 793-800
  • 16
    • 3042623788 scopus 로고    scopus 로고
    • Sequencing of the Triticum monococcum hardness locus reveals good microcolinearity with rice
    • 10.1007/s00438-004-0991-y, 15014981
    • Chantret N, Cenci A, Sabot F, Anderson OD, Dubcovsky J. Sequencing of the Triticum monococcum hardness locus reveals good microcolinearity with rice. Mol Genet Genomics 2004, 271:377-386. 10.1007/s00438-004-0991-y, 15014981.
    • (2004) Mol Genet Genomics , vol.271 , pp. 377-386
    • Chantret, N.1    Cenci, A.2    Sabot, F.3    Anderson, O.D.4    Dubcovsky, J.5
  • 17
    • 41149135379 scopus 로고    scopus 로고
    • Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q
    • 10.1007/s10142-008-0073-z, 18210171
    • Faris JD, Zhang Z, Fellers JP, Gill BS. Micro-colinearity between rice, Brachypodium, and Triticum monococcum at the wheat domestication locus Q. Funct Integr Genomics 2008, 8:149-164. 10.1007/s10142-008-0073-z, 18210171.
    • (2008) Funct Integr Genomics , vol.8 , pp. 149-164
    • Faris, J.D.1    Zhang, Z.2    Fellers, J.P.3    Gill, B.S.4
  • 19
    • 0033529227 scopus 로고    scopus 로고
    • High gene density is conserved at syntenic loci of small and large grass genomes
    • 10.1073/pnas.96.14.8265, 22223, 10393983
    • Feuillet C, Keller B. High gene density is conserved at syntenic loci of small and large grass genomes. Proc Natl Acad Sci USA 1999, 96:8265-8270. 10.1073/pnas.96.14.8265, 22223, 10393983.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 8265-8270
    • Feuillet, C.1    Keller, B.2
  • 21
    • 0034944487 scopus 로고    scopus 로고
    • Analysis of a contiguous 211 kb sequence in diploid wheat (Triticum monococcum L.) reveals multiple mechanisms of genome evolution
    • 10.1046/j.1365-313X.2001.01028.x, 11439119
    • Wicker T, Stein N, Albar L, Feuillet C, Schlagenhauf E, Keller B. Analysis of a contiguous 211 kb sequence in diploid wheat (Triticum monococcum L.) reveals multiple mechanisms of genome evolution. Plant J 2001, 26:307-316. 10.1046/j.1365-313X.2001.01028.x, 11439119.
    • (2001) Plant J , vol.26 , pp. 307-316
    • Wicker, T.1    Stein, N.2    Albar, L.3    Feuillet, C.4    Schlagenhauf, E.5    Keller, B.6
  • 22
    • 16544383364 scopus 로고    scopus 로고
    • Comparative sequence analysis of the region harboring the hardness locus in barley and its colinear region in rice
    • 10.1104/pp.104.044081, 523377, 15466237
    • Caldwell KS, Langridge P, Powell W. Comparative sequence analysis of the region harboring the hardness locus in barley and its colinear region in rice. Plant Physiol 2004, 136:3177-3190. 10.1104/pp.104.044081, 523377, 15466237.
    • (2004) Plant Physiol , vol.136 , pp. 3177-3190
    • Caldwell, K.S.1    Langridge, P.2    Powell, W.3
  • 23
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing B, Green P. Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 1998, 8:186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 24
    • 33750030513 scopus 로고    scopus 로고
    • Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B
    • 10.1111/j.1365-313X.2006.02891.x, 17010109
    • Paux E, Roger D, Badaeva E, Gay G, Bernard M, Sourdille P, Feuillet C. Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B. Plant J 2006, 48:463-474. 10.1111/j.1365-313X.2006.02891.x, 17010109.
    • (2006) Plant J , vol.48 , pp. 463-474
    • Paux, E.1    Roger, D.2    Badaeva, E.3    Gay, G.4    Bernard, M.5    Sourdille, P.6    Feuillet, C.7
  • 25
    • 53749101560 scopus 로고    scopus 로고
    • A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R
    • 10.1186/1471-2229-8-95, 2565679, 18803819
    • Bartos J, Paux E, Kofler R, Havrankova M, Kopecky D, Suchankova P, Safar J, Simkova H, Town CD, Lelley T, et al. A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R. BMC Plant Biol 2008, 8:95. 10.1186/1471-2229-8-95, 2565679, 18803819.
    • (2008) BMC Plant Biol , vol.8 , pp. 95
    • Bartos, J.1    Paux, E.2    Kofler, R.3    Havrankova, M.4    Kopecky, D.5    Suchankova, P.6    Safar, J.7    Simkova, H.8    Town, C.D.9    Lelley, T.10
  • 28
    • 0029654258 scopus 로고
    • A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis
    • 10.1016/0378-1119(95)00714-8, 8566757
    • Sonnhammer EL, Durbin R. A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis. Gene 1995, 167:GC1-10. 10.1016/0378-1119(95)00714-8, 8566757.
    • (1995) Gene , vol.167
    • Sonnhammer, E.L.1    Durbin, R.2
  • 29
    • 67650593842 scopus 로고    scopus 로고
    • Chromodomains and LTR retrotransposons in plants
    • 2686373, 19513271
    • Novikova O. Chromodomains and LTR retrotransposons in plants. Commun Integr Biol 2009, 2:158-162. 2686373, 19513271.
    • (2009) Commun Integr Biol , vol.2 , pp. 158-162
    • Novikova, O.1
  • 30
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • 10.1093/bioinformatics/14.9.755, 9918945
    • Eddy SR. Profile hidden Markov models. Bioinformatics 1998, 14:755-763. 10.1093/bioinformatics/14.9.755, 9918945.
    • (1998) Bioinformatics , vol.14 , pp. 755-763
    • Eddy, S.R.1
  • 31
    • 58149269509 scopus 로고    scopus 로고
    • Novel clades of chromodomain-containing Gypsy LTR retrotransposons from mosses (Bryophyta)
    • 10.1111/j.1365-313X.2008.03621.x, 18643967
    • Novikova O, Mayorov V, Smyshlyaev G, Fursov M, Adkison L, Pisarenko O, Blinov A. Novel clades of chromodomain-containing Gypsy LTR retrotransposons from mosses (Bryophyta). Plant J 2008, 56:562-574. 10.1111/j.1365-313X.2008.03621.x, 18643967.
    • (2008) Plant J , vol.56 , pp. 562-574
    • Novikova, O.1    Mayorov, V.2    Smyshlyaev, G.3    Fursov, M.4    Adkison, L.5    Pisarenko, O.6    Blinov, A.7
  • 32
    • 0026098009 scopus 로고
    • The Polycomb protein shares a homologous domain with a heterochromatin-associated protein of Drosophila
    • 10.1073/pnas.88.1.263, 50790, 1898775
    • Paro R, Hogness DS. The Polycomb protein shares a homologous domain with a heterochromatin-associated protein of Drosophila. Proc Natl Acad Sci USA 1991, 88:263-267. 10.1073/pnas.88.1.263, 50790, 1898775.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 263-267
    • Paro, R.1    Hogness, D.S.2
  • 33
    • 0029921392 scopus 로고    scopus 로고
    • Heterochromatin and gene regulation in Drosophila
    • 10.1016/S0959-437X(96)80050-5, 8722176
    • Elgin SC. Heterochromatin and gene regulation in Drosophila. Curr Opin Genet Dev 1996, 6:193-202. 10.1016/S0959-437X(96)80050-5, 8722176.
    • (1996) Curr Opin Genet Dev , vol.6 , pp. 193-202
    • Elgin, S.C.1
  • 34
    • 38549109509 scopus 로고    scopus 로고
    • The Gypsy Database (GyDB) of mobile genetic elements
    • 10.1093/nar/gkm697, 2238898, 17895280
    • Lloréns C, Futami R, Bezemer D, Moya A. The Gypsy Database (GyDB) of mobile genetic elements. Nucleic Acids Res 2008, 36:D38-46. 10.1093/nar/gkm697, 2238898, 17895280.
    • (2008) Nucleic Acids Res , vol.36
    • Lloréns, C.1    Futami, R.2    Bezemer, D.3    Moya, A.4
  • 35
    • 0029310517 scopus 로고
    • Molecular characterization of a tandem repeat, Afa family, and its distribution among Triticeae
    • Nagaki K, Tsujimoto H, Isono K, Sasakuma T. Molecular characterization of a tandem repeat, Afa family, and its distribution among Triticeae. Genome 1995, 38:479-486.
    • (1995) Genome , vol.38 , pp. 479-486
    • Nagaki, K.1    Tsujimoto, H.2    Isono, K.3    Sasakuma, T.4
  • 36
    • 0033951447 scopus 로고    scopus 로고
    • Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize
    • 10.1073/pnas.97.3.1160, 15555, 10655501
    • Zhang Q, Arbuckle J, Wessler SR. Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize. Proc Natl Acad Sci USA 2000, 97:1160-1165. 10.1073/pnas.97.3.1160, 15555, 10655501.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 1160-1165
    • Zhang, Q.1    Arbuckle, J.2    Wessler, S.R.3
  • 37
    • 8844252293 scopus 로고    scopus 로고
    • TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders
    • 10.1093/bioinformatics/bth315, 15145805
    • Majoros WH, Pertea M, Salzberg SL. TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders. Bioinformatics 2004, 20:2878-2879. 10.1093/bioinformatics/bth315, 15145805.
    • (2004) Bioinformatics , vol.20 , pp. 2878-2879
    • Majoros, W.H.1    Pertea, M.2    Salzberg, S.L.3
  • 39
    • 0037624063 scopus 로고    scopus 로고
    • Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
    • 10.1126/science.1081288, 12869764, Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team
    • Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N, Yazaki J, Ishikawa M, et al. Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science 2003, 301:376-379. 10.1126/science.1081288, 12869764, Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team.
    • (2003) Science , vol.301 , pp. 376-379
    • Kikuchi, S.1    Satoh, K.2    Nagata, T.3    Kawagashira, N.4    Doi, K.5    Kishimoto, N.6    Yazaki, J.7    Ishikawa, M.8
  • 40
    • 34447102400 scopus 로고    scopus 로고
    • Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants
    • 10.1111/j.1365-313X.2007.03136.x, 17565583
    • Silverstein KA, Moskal WA, Wu HC, Underwood BA, Graham MA, Town CD, VandenBosch KA. Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants. Plant J 2007, 51:262-280. 10.1111/j.1365-313X.2007.03136.x, 17565583.
    • (2007) Plant J , vol.51 , pp. 262-280
    • Silverstein, K.A.1    Moskal, W.A.2    Wu, H.C.3    Underwood, B.A.4    Graham, M.A.5    Town, C.D.6    VandenBosch, K.A.7
  • 41
    • 3543042528 scopus 로고    scopus 로고
    • Computational identification and characterization of novel genes from legumes
    • 10.1104/pp.104.037531, 519039, 15266052
    • Graham MA, Silverstein KA, Cannon SB, VandenBosch KA. Computational identification and characterization of novel genes from legumes. Plant Physiol 2004, 135:1179-1197. 10.1104/pp.104.037531, 519039, 15266052.
    • (2004) Plant Physiol , vol.135 , pp. 1179-1197
    • Graham, M.A.1    Silverstein, K.A.2    Cannon, S.B.3    VandenBosch, K.A.4
  • 42
    • 0346494835 scopus 로고    scopus 로고
    • The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants
    • 10.1093/nar/gkh099, 308833, 14681434
    • Ouyang S, Buell CR. The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants. Nucleic Acids Res 2004, 32:D360-363. 10.1093/nar/gkh099, 308833, 14681434.
    • (2004) Nucleic Acids Res , vol.32
    • Ouyang, S.1    Buell, C.R.2
  • 43
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • 10.1038/35048692, 11130711, Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815. 10.1038/35048692, 11130711, Arabidopsis Genome Initiative.
    • (2000) Nature , vol.408 , pp. 796-815
  • 45
    • 0032964297 scopus 로고    scopus 로고
    • BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences
    • 10.1111/j.1574-6968.1999.tb13575.x, 10339815
    • Tatusova TA, Madden TL. BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences. FEMS Microbiol Lett 1999, 174:247-250. 10.1111/j.1574-6968.1999.tb13575.x, 10339815.
    • (1999) FEMS Microbiol Lett , vol.174 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 46
    • 40949145616 scopus 로고    scopus 로고
    • Contrasted microcolinearity and gene evolution within a homoeologous region of wheat and barley species
    • 10.1007/s00239-008-9066-8, 18274696
    • Chantret N, Salse J, Sabot F, Bellec A, Laubin B, Dubois I, Dossat C, Sourdille P, Joudrier P, Gautier MF, et al. Contrasted microcolinearity and gene evolution within a homoeologous region of wheat and barley species. J Mol Evol 2008, 66:138-150. 10.1007/s00239-008-9066-8, 18274696.
    • (2008) J Mol Evol , vol.66 , pp. 138-150
    • Chantret, N.1    Salse, J.2    Sabot, F.3    Bellec, A.4    Laubin, B.5    Dubois, I.6    Dossat, C.7    Sourdille, P.8    Joudrier, P.9    Gautier, M.F.10
  • 47
    • 32544436414 scopus 로고    scopus 로고
    • Structural variation and evolution of a defense-gene cluster in natural populations of Aegilops tauschii
    • 10.1007/s00122-005-0160-7, 16402192
    • Brooks SA, Huang L, Herbel MN, Gill BS, Brown-Guedira G, Fellers JP. Structural variation and evolution of a defense-gene cluster in natural populations of Aegilops tauschii. Theor Appl Genet 2006, 112:618-626. 10.1007/s00122-005-0160-7, 16402192.
    • (2006) Theor Appl Genet , vol.112 , pp. 618-626
    • Brooks, S.A.1    Huang, L.2    Herbel, M.N.3    Gill, B.S.4    Brown-Guedira, G.5    Fellers, J.P.6
  • 48
    • 0036010794 scopus 로고    scopus 로고
    • Numerous small rearrangements of gene content, order and orientation differentiate grass genomes
    • 10.1023/A:1014841515249, 11999852
    • Bennetzen JL, Ramakrishna W. Numerous small rearrangements of gene content, order and orientation differentiate grass genomes. Plant Mol Biol 2002, 48(5-6):821-7. 10.1023/A:1014841515249, 11999852.
    • (2002) Plant Mol Biol , vol.48 , Issue.5-6 , pp. 821-827
    • Bennetzen, J.L.1    Ramakrishna, W.2
  • 49
    • 4143116005 scopus 로고    scopus 로고
    • In silico comparative analysis reveals a mosaic conservation of genes within a novel colinear region in wheat chromosome 1AS and rice chromosome 5S
    • 10.1007/s10142-004-0103-4, 14767678
    • Guyot R, Yahiaoui N, Feuillet C, Keller B. In silico comparative analysis reveals a mosaic conservation of genes within a novel colinear region in wheat chromosome 1AS and rice chromosome 5S. Funct Integr Genomics 2004, 4(1):47-58. 10.1007/s10142-004-0103-4, 14767678.
    • (2004) Funct Integr Genomics , vol.4 , Issue.1 , pp. 47-58
    • Guyot, R.1    Yahiaoui, N.2    Feuillet, C.3    Keller, B.4
  • 51
    • 0035103949 scopus 로고    scopus 로고
    • Evolutionary history of the grasses
    • 10.1104/pp.125.3.1198, 1539375, 11244101
    • Kellogg EA. Evolutionary history of the grasses. Plant Physiol 2001, 125:1198-1205. 10.1104/pp.125.3.1198, 1539375, 11244101.
    • (2001) Plant Physiol , vol.125 , pp. 1198-1205
    • Kellogg, E.A.1
  • 52
    • 21144454436 scopus 로고    scopus 로고
    • Gene movement by Helitron transposons contributes to the haplotype variability of maize
    • 10.1073/pnas.0502923102, 1157042, 15951422
    • Lai J, Li Y, Messing J, Dooner HK. Gene movement by Helitron transposons contributes to the haplotype variability of maize. Proc Natl Acad Sci USA 2005, 102:9068-9073. 10.1073/pnas.0502923102, 1157042, 15951422.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 9068-9073
    • Lai, J.1    Li, Y.2    Messing, J.3    Dooner, H.K.4
  • 53
    • 28344433379 scopus 로고    scopus 로고
    • Plant genomes: massive changes of the maize genome are caused by Helitrons
    • 10.1038/sj.hdy.6800764, 16222326
    • Lal SK, Hannah LC. Plant genomes: massive changes of the maize genome are caused by Helitrons. Heredity 2005, 95:421-422. 10.1038/sj.hdy.6800764, 16222326.
    • (2005) Heredity , vol.95 , pp. 421-422
    • Lal, S.K.1    Hannah, L.C.2
  • 54
    • 33344471412 scopus 로고    scopus 로고
    • Molecular and functional diversity of maize
    • 10.1016/j.pbi.2006.01.013, 16459128
    • Buckler ES, Gaut BS, McMullen MD. Molecular and functional diversity of maize. Curr Opin Plant Biol 2006, 9:172-176. 10.1016/j.pbi.2006.01.013, 16459128.
    • (2006) Curr Opin Plant Biol , vol.9 , pp. 172-176
    • Buckler, E.S.1    Gaut, B.S.2    McMullen, M.D.3
  • 55
    • 0038363536 scopus 로고    scopus 로고
    • CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements
    • 10.1104/pp.102.015743, 166951, 12746511
    • Wicker T, Guyot R, Yahiaoui N, Keller B. CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements. Plant Physiol 2003, 132:52-63. 10.1104/pp.102.015743, 166951, 12746511.
    • (2003) Plant Physiol , vol.132 , pp. 52-63
    • Wicker, T.1    Guyot, R.2    Yahiaoui, N.3    Keller, B.4
  • 56
    • 27144543515 scopus 로고    scopus 로고
    • Updating of transposable element annotations from large wheat genomic sequences reveals diverse activities and gene associations
    • 10.1007/s00438-005-0012-9, 16034625
    • Sabot F, Guyot R, Wicker T, Chantret N, Laubin B, Chalhoub B, Leroy P, Sourdille P, Bernard M. Updating of transposable element annotations from large wheat genomic sequences reveals diverse activities and gene associations. Mol Genet Genomics 2005, 274:119-130. 10.1007/s00438-005-0012-9, 16034625.
    • (2005) Mol Genet Genomics , vol.274 , pp. 119-130
    • Sabot, F.1    Guyot, R.2    Wicker, T.3    Chantret, N.4    Laubin, B.5    Chalhoub, B.6    Leroy, P.7    Sourdille, P.8    Bernard, M.9
  • 57
    • 4944239027 scopus 로고    scopus 로고
    • Pack-MULE transposable elements mediate gene evolution in plants
    • 10.1038/nature02953, 15457261
    • Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR. Pack-MULE transposable elements mediate gene evolution in plants. Nature 2004, 431:569-573. 10.1038/nature02953, 15457261.
    • (2004) Nature , vol.431 , pp. 569-573
    • Jiang, N.1    Bao, Z.2    Zhang, X.3    Eddy, S.R.4    Wessler, S.R.5
  • 58
    • 0036440578 scopus 로고    scopus 로고
    • Analysis of 106 kb of contiguous DNA sequence from the D genome of wheat reveals high gene density and a complex arrangement of genes related to disease resistance
    • 10.1139/g02-049, 12416630
    • Brooks SA, Huang L, Gill BS, Fellers JP. Analysis of 106 kb of contiguous DNA sequence from the D genome of wheat reveals high gene density and a complex arrangement of genes related to disease resistance. Genome 2002, 45:963-972. 10.1139/g02-049, 12416630.
    • (2002) Genome , vol.45 , pp. 963-972
    • Brooks, S.A.1    Huang, L.2    Gill, B.S.3    Fellers, J.P.4
  • 59
    • 0042099904 scopus 로고    scopus 로고
    • Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs
    • Qi L, Echalier B, Friebe B, Gill BS. Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs. Funct Integr Genomics 2003, 3:39-55.
    • (2003) Funct Integr Genomics , vol.3 , pp. 39-55
    • Qi, L.1    Echalier, B.2    Friebe, B.3    Gill, B.S.4
  • 60
    • 0030467769 scopus 로고    scopus 로고
    • Identification and high-density mapping of gene-rich regions in chromosome group 1 of wheat
    • 1207735, 8978071
    • Gill KS, Gill BS, Endo TR, Taylor T. Identification and high-density mapping of gene-rich regions in chromosome group 1 of wheat. Genetics 1996, 144:1883-1891. 1207735, 8978071.
    • (1996) Genetics , vol.144 , pp. 1883-1891
    • Gill, K.S.1    Gill, B.S.2    Endo, T.R.3    Taylor, T.4
  • 61
    • 0033977072 scopus 로고    scopus 로고
    • Saturation mapping of a gene-rich recombination hot spot region in wheat
    • 1460934, 10655233
    • Faris JD, Haen KM, Gill BS. Saturation mapping of a gene-rich recombination hot spot region in wheat. Genetics 2000, 154:823-835. 1460934, 10655233.
    • (2000) Genetics , vol.154 , pp. 823-835
    • Faris, J.D.1    Haen, K.M.2    Gill, B.S.3
  • 63
    • 33745593691 scopus 로고    scopus 로고
    • Molecular characterization of a diagnostic DNA marker for domesticated tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to hexaploid wheat
    • 10.1093/molbev/msl004, 16675504
    • Dvorak J, Akhunov ED, Akhunov AR, Deal KR, Luo MC. Molecular characterization of a diagnostic DNA marker for domesticated tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to hexaploid wheat. Mol Biol Evol 2006, 23:1386-1396. 10.1093/molbev/msl004, 16675504.
    • (2006) Mol Biol Evol , vol.23 , pp. 1386-1396
    • Dvorak, J.1    Akhunov, E.D.2    Akhunov, A.R.3    Deal, K.R.4    Luo, M.C.5
  • 64
    • 0036579672 scopus 로고    scopus 로고
    • Transposable elements, genes and recombination in a 215-kb contig from wheat chromosome 5A(m)
    • 10.1007/s10142-002-0056-4, 12021852
    • SanMiguel PJ, Ramakrishna W, Bennetzen JL, Busso CS, Dubcovsky J. Transposable elements, genes and recombination in a 215-kb contig from wheat chromosome 5A(m). Funct Integr Genomics 2002, 2:70-80. 10.1007/s10142-002-0056-4, 12021852.
    • (2002) Funct Integr Genomics , vol.2 , pp. 70-80
    • SanMiguel, P.J.1    Ramakrishna, W.2    Bennetzen, J.L.3    Busso, C.S.4    Dubcovsky, J.5
  • 65
    • 40449136688 scopus 로고    scopus 로고
    • Chromodomains direct integration of retrotransposons to heterochromatin
    • 10.1101/gr.7146408, 2259100, 18256242
    • Gao X, Hou Y, Ebina H, Levin HL, Voytas DF. Chromodomains direct integration of retrotransposons to heterochromatin. Genome Res 2008, 18:359-369. 10.1101/gr.7146408, 2259100, 18256242.
    • (2008) Genome Res , vol.18 , pp. 359-369
    • Gao, X.1    Hou, Y.2    Ebina, H.3    Levin, H.L.4    Voytas, D.F.5
  • 66
    • 0343986281 scopus 로고    scopus 로고
    • Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints
    • 1460903, 10628998
    • Künzel G, Korzun L, Meister A. Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints. Genetics 2000, 154:397-412. 1460903, 10628998.
    • (2000) Genetics , vol.154 , pp. 397-412
    • Künzel, G.1    Korzun, L.2    Meister, A.3
  • 67
    • 45849128723 scopus 로고    scopus 로고
    • Paramutation: Epigenetic Instructions Passed Across Generations
    • 2323780, 18430919
    • Chandler VL, Alleman M. Paramutation: Epigenetic Instructions Passed Across Generations. Genetics 2008, 178(4):1839-4. 2323780, 18430919.
    • (2008) Genetics , vol.178 , Issue.4 , pp. 1839-1844
    • Chandler, V.L.1    Alleman, M.2
  • 68
  • 69
    • 55449108640 scopus 로고    scopus 로고
    • Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats
    • 10.1371/journal.pgen.0010079, 1317654,1317654, 16389298
    • May BP, Lippman ZB, Fang Y, Spector DL, Martienssen RA. Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats. PLoS Genet 2005, 1:e79. 10.1371/journal.pgen.0010079, 1317654,1317654, 16389298.
    • (2005) PLoS Genet , vol.1
    • May, B.P.1    Lippman, Z.B.2    Fang, Y.3    Spector, D.L.4    Martienssen, R.A.5
  • 70
    • 33746502166 scopus 로고    scopus 로고
    • A distinct small RNA pathway silences selfish genetic elements in the germline
    • 10.1126/science.1129333, 16809489
    • Vagin VV, Sigova A, Li C, Seitz H, Gvozdev V, Zamore PD. A distinct small RNA pathway silences selfish genetic elements in the germline. Science 2006, 313:320-324. 10.1126/science.1129333, 16809489.
    • (2006) Science , vol.313 , pp. 320-324
    • Vagin, V.V.1    Sigova, A.2    Li, C.3    Seitz, H.4    Gvozdev, V.5    Zamore, P.D.6
  • 71
    • 33751506478 scopus 로고    scopus 로고
    • Distinct pathways for snoRNA and mRNA termination
    • 10.1016/j.molcel.2006.11.011, 17157255
    • Kim M, Vasiljeva L, Rando OJ, Zhelkovsky A, Moore C, Buratowski S. Distinct pathways for snoRNA and mRNA termination. Mol Cell 2006, 24:723-734. 10.1016/j.molcel.2006.11.011, 17157255.
    • (2006) Mol Cell , vol.24 , pp. 723-734
    • Kim, M.1    Vasiljeva, L.2    Rando, O.J.3    Zhelkovsky, A.4    Moore, C.5    Buratowski, S.6
  • 72
    • 6944223154 scopus 로고    scopus 로고
    • Microsatellite-based deletion bin system for the establishment of genetic-physical map relationships in wheat (Triticum aestivum L.)
    • 10.1007/s10142-004-0106-1, 15004738
    • Sourdille P, Singh S, Cadalen T, Brown-Guedira GL, Gay G, Qi L, Gill BS, Dufour P, Murigneux A, Bernard M. Microsatellite-based deletion bin system for the establishment of genetic-physical map relationships in wheat (Triticum aestivum L.). Funct Integr Genomics 2004, 4:12-25. 10.1007/s10142-004-0106-1, 15004738.
    • (2004) Funct Integr Genomics , vol.4 , pp. 12-25
    • Sourdille, P.1    Singh, S.2    Cadalen, T.3    Brown-Guedira, G.L.4    Gay, G.5    Qi, L.6    Gill, B.S.7    Dufour, P.8    Murigneux, A.9    Bernard, M.10
  • 73
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • 10.1006/jmbi.1997.0951, 9149143
    • Burge C, Karlin S. Prediction of complete gene structures in human genomic DNA. J Mol Biol 1997, 268(1):78-94. 10.1006/jmbi.1997.0951, 9149143.
    • (1997) J Mol Biol , vol.268 , Issue.1 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 81
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: multiple alignment of conserved genomic sequence with rearrangements
    • 10.1101/gr.2289704, 442156, 15231754
    • Darling AC, Mau B, Blattner FR, Perna NT. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res 2004, 14:1394-1403. 10.1101/gr.2289704, 442156, 15231754.
    • (2004) Genome Res , vol.14 , pp. 1394-1403
    • Darling, A.C.1    Mau, B.2    Blattner, F.R.3    Perna, N.T.4


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