Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs

Functional and Integrative Genomics

Volumn 3, Issue 1-2, 2003, Pages 39-55

  Qi, Lili ^a   Echalier, Benjamin ^a   Friebe, Bernd ^a   Gill, Bikram S ^a  

^a KANSAS STATE UNIVERSITY   (United States)

Author keywords

Deletion lines; EST; Genomics; Triticum aestivum

Indexed keywords

ANEUPLOIDY; ARTICLE; CHROMOSOME ABERRATION; CHROMOSOME MAP; EXPRESSED SEQUENCE TAG; GENE DELETION; GENE TRANSLOCATION; GENETIC IDENTIFICATION; GENETIC SCREENING; MOLECULAR CLONING; MOLECULAR GENETICS; NONHUMAN; PLANT GENETICS; PRIORITY JOURNAL; TETRASOMY; WHEAT; BIOLOGICAL MODEL; GENETICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SOUTHERN BLOTTING;

TRITICEAE; TRITICUM AESTIVUM;

BLOTTING, SOUTHERN; CHROMOSOME MAPPING; CLONING, MOLECULAR; EXPRESSED SEQUENCE TAGS; GENE DELETION; MODELS, GENETIC; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; TRITICUM;

EID: 0042099904     PISSN: 1438793X     EISSN: 14387948     Source Type: Journal    
DOI: 10.1007/s10142-002-0063-5     Document Type: Article

References (36)

1. Bridges CB (1917) Deficiency. Genetics 2:445-465
2. Burnham CR (1972) Discussions in cytogenetics. http://www.agron. missouri.edu/burnham
3. Delaney DE, Nasuda S, Endo TR, Gill BS, Hulbert SH (1995a) Cytologically based physical maps of the group-2 chromosomes of wheat. Theor Appl Genet 91:568-573
4. Delaney DE, Nasuda S, Endo TR, Gill BS, Hulbert SH (1995b) Cytologically based physical maps of the group-3 chromosomes of wheat. Theor Appl Genet 91:780-782
5. Devos KM, Sorrells ME, Anderson JA, Miller TE, Reader SM, Lukaszewski AJ, Dubcovsky J, Sharp PJ, Faris J, Gale MD (1999) Chromosome aberrations in wheat nullisomic-tetrasomic and ditelosomic lines. Cereal Res Comm 27(3):231-237
6. Endo TR (1988) Induction of chromosomal structural changes by a chromosome of Aegilops cylindrica L. in common wheat. J Hered 79:366-370
7. Endo TR (1990) Gametocidal chromosomes and their induction of chromosome mutation in wheat. Jpn J Genet 65:135-152
8. Endo TR, Gill BS (1996) The deletion stocks of common wheat. J Hered 87:295-307
9. Endo TR, Mukai Y, Yamamoto M, Gill BS (1991) Physical mapping of a male-fertility gene of common wheat. Jpn J Genet 66:291-295
10. Faris JD, Haen KM, Gill BS (2000) Saturation mapping of a gene-rich recombination hot spot region in wheat. Genetics 154: 823-835
11. Feuillet C, Keller B (1999) High gene density is conserved at syntenic loci of small and large grass genomes. Proc Natl Acad Sci USA 96:8265-8270
12. Friebe B, Kynast RG, Zhang P, Qi LL, Dhar M, Gill BS (2001) Chromosome healing by addition of telomeric repeats in wheat occurs during the first mitotic divisions of the saprophyte and is a gradual process. Chromosome Res 9:137-146
13. Gill BS, Friebe B, Endo TR (1991) Standard karyotype and nomenclature system for description of chromosome fragments and structural aberrations in wheat (Triticum aestivum). Genome 34:830-839
14. Gill KS, Gill BS, Endo TR (1993) A chromosome region-specific mapping strategy reveals gene-rich telomeric ends in wheat. Chromosoma 102:374-381
15. Gill KS, Gill BS, Endo TR, Boyko EV (1996a) Identification and high-density mapping of gene-rich regions in chromosome group 5 of wheat. Genetics 143:1001-1012
16. Gill KS, Gill BS, Endo TR, Taylor T (1996b) Identification and high-density mapping of gene-rich regions in chromosome group 1 of wheat. Genetics 144:1883-1891
17. Hohmann U, Endo TR, Gill KS, Gill BS (1994) Comparison of genetic and physical maps of group 7 chromosomes from Triticum aestivum L. Mol Gen Genet 245:644-653
18. Khush GS, Rick CM (1968) Cytogenetic analysis of the tomato genome by means of induced deficiencies. Chromosoma 23:452-484
19. Kota RS, Gill KS, Gill BS, Endo TR (1993) A cytogenetically based physical map of chromosome 1B in common wheat. Genome 36:548-554
20. Li X, Song YJ, Century K, Straight S, Roland P, Dong XN, Lassner M, Zhang YL (2001) A fast neutron deletion mutagenesis-based reverse genetics system for plants. Plant J 27:235-242
21. Mackensen O (1935) Locating genes on salivary gland chromosomes. J Hered 26:163-174
22. McClintock B (1931) Cytological observations of deficiencies involving known genes, translocations and an inversion in Zea mays. Mo Agric Exp Stn Res Bull 163:1-30
23. McClintock B (1941) The stability of broken ends of chromosomes in Zea mays. Genetics 26:234-282
24. Mickelson-Young L, Endo TR, Gill BS (1995) A cytogenetic ladder-map of the wheat homoeologous group-4 chromosomes. Theor Appl Genet 90:1007-1011
25. Muller HJ (1940) Analysis of the process of structural changes in chromosomes of Drosophila. J Genet 40:1-66
26. Nasuda S, Friebe B, Gill BS (1998) Gameocidal genes induce chromosome breakage in the interphase prior to the first mitotic cell division of the male gametophyte in wheat. Genetics 149:1115-1124
27. Qi LL, Gill BS (2001) High-density physical maps reveal that the dominant male-sterile gene Ms3 is located in a genomic region of low recombination in wheat and is not amenable to map-based cloning. Theor Appl Genet 103:998-1006
28. Röder MS, Korzun V, Gill BS, Ganal MW (1998) The physical mapping of microsatellite markers in wheat. Genome 41:278-283
29. Sarma RN, Fish L, Gill BS, Snape JW (2000) Physical characterization of the homoeologous group 5 chromosomes of wheat in terms of rice linkage blocks, and physical mapping of some important genes. Genome 43:191-199
30. Sears ER (1954) The aneuploids of common wheat. Univ Mo Agric Exp Stn Bull 572:1-58
31. Sears ER (1966) Nullisomic-tetrasomic combinations in hexaploid wheat. In: Rilly R, Lewis KR (eds) Chromosome manipulations and plant genetics. Oliver and Boyd, Edinburgh, pp 29-45
32. Sears ER, Sears MS (1978) The telocentric chromosomes of common wheat. In: Ramanujam S (ed) Proceedings of the 5th International Wheat Genetics Symposium. Indian Society of Genetics and Plant Breeding, New Delhi, pp 389-407
33. Tsujimoto H (1993) Synthesis of telomere repetitive sequences at the broken ends in common wheat chromosomes. Wheat Inf Serv 76:61-62
34. Weng Y, Tuleen NA, Hart GE (2000) Extended physical maps and a consensus physical map of the homoeologous group-6 chromosomes of wheat (Triticum aestivum L. em Thell.). Theor Appl Genet 100:519-527
35. Werner JE, Kota RS, Gill BS, Endo TR (1992a) Distribution of telomeric repeats and their role in the healing of broken chromosomes in wheat. Genome 35:844-848
36. Werner JE, Endo TR, Gill BS (1992b) Toward a cytogenetically based physical map of the wheat genome. Proc Natl Acad Sci USA 89:11307-11311