-
1
-
-
0024195429
-
DNA damage produced by ionizing radiation in mammalian cells: identities, mechanisms of formation, and reparability
-
Ward J.F. DNA damage produced by ionizing radiation in mammalian cells: identities, mechanisms of formation, and reparability. Prog. Nucleic Acid Res. Mol. Biol. 35 (1988) 95-125
-
(1988)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.35
, pp. 95-125
-
-
Ward, J.F.1
-
2
-
-
0030946855
-
Deletions at stalled replication forks occur by two different pathways
-
Bierne H., Ehrlich S.D., and Michel B. Deletions at stalled replication forks occur by two different pathways. EMBO J. 16 (1997) 3332-3340
-
(1997)
EMBO J.
, vol.16
, pp. 3332-3340
-
-
Bierne, H.1
Ehrlich, S.D.2
Michel, B.3
-
3
-
-
0030966099
-
Recent advances in understanding V(D)J recombination
-
Gellert M. Recent advances in understanding V(D)J recombination. Adv. Immunol. 64 (1997) 39-64
-
(1997)
Adv. Immunol.
, vol.64
, pp. 39-64
-
-
Gellert, M.1
-
4
-
-
0031025093
-
DNA double-strand breaks caused by replication arrest
-
Michel B., Ehrlich S.D., and Uzest M. DNA double-strand breaks caused by replication arrest. EMBO J. 16 (1997) 430-438
-
(1997)
EMBO J.
, vol.16
, pp. 430-438
-
-
Michel, B.1
Ehrlich, S.D.2
Uzest, M.3
-
5
-
-
34948899943
-
Mre11-Rad50-Nbs1 is a keystone complex connecting DNA repair machinery, double-strand break signaling, and the chromatin template
-
Williams R.S., Williams J.S., and Tainer J.A. Mre11-Rad50-Nbs1 is a keystone complex connecting DNA repair machinery, double-strand break signaling, and the chromatin template. Biochem. Cell Biol. 85 (2007) 509-520
-
(2007)
Biochem. Cell Biol.
, vol.85
, pp. 509-520
-
-
Williams, R.S.1
Williams, J.S.2
Tainer, J.A.3
-
7
-
-
0030089480
-
The sbcC and sbcD genes of Escherichia coli encode a nuclease involved in palindrome inviability and genetic recombination
-
Connelly J.C., and Leach D.R. The sbcC and sbcD genes of Escherichia coli encode a nuclease involved in palindrome inviability and genetic recombination. Genes Cells 1 (1996) 285-291
-
(1996)
Genes Cells
, vol.1
, pp. 285-291
-
-
Connelly, J.C.1
Leach, D.R.2
-
8
-
-
0032085295
-
The 3' to 5' exonuclease activity of Mre 11 facilitates repair of DNA double-strand breaks
-
Paull T.T., and Gellert M. The 3' to 5' exonuclease activity of Mre 11 facilitates repair of DNA double-strand breaks. Mol. Cell 1 (1998) 969-979
-
(1998)
Mol. Cell
, vol.1
, pp. 969-979
-
-
Paull, T.T.1
Gellert, M.2
-
9
-
-
0035930342
-
Promotion of Dnl4-catalyzed DNA end-joining by the Rad50/Mre11/Xrs2 and Hdf1/Hdf2 complexes
-
Chen L., Trujillo K., Ramos W., Sung P., and Tomkinson A.E. Promotion of Dnl4-catalyzed DNA end-joining by the Rad50/Mre11/Xrs2 and Hdf1/Hdf2 complexes. Mol. Cell 8 (2001) 1105-1115
-
(2001)
Mol. Cell
, vol.8
, pp. 1105-1115
-
-
Chen, L.1
Trujillo, K.2
Ramos, W.3
Sung, P.4
Tomkinson, A.E.5
-
10
-
-
0036682830
-
Tethering on the brink: the evolutionarily conserved Mre11-Rad50 complex
-
Connelly J.C., and Leach D.R. Tethering on the brink: the evolutionarily conserved Mre11-Rad50 complex. Trends Biochem. Sci. 27 (2002) 410-418
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 410-418
-
-
Connelly, J.C.1
Leach, D.R.2
-
11
-
-
0035930329
-
Human Rad50/Mre11 is a flexible complex that can tether DNA ends
-
de Jager M., van Noort J., van Gent D.C., Dekker C., Kanaar R., and Wyman C. Human Rad50/Mre11 is a flexible complex that can tether DNA ends. Mol. Cell 8 (2001) 1129-1135
-
(2001)
Mol. Cell
, vol.8
, pp. 1129-1135
-
-
de Jager, M.1
van Noort, J.2
van Gent, D.C.3
Dekker, C.4
Kanaar, R.5
Wyman, C.6
-
12
-
-
0035906860
-
Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase
-
Hopfner K.P., Karcher A., Craig L., Woo T.T., Carney J.P., and Tainer J.A. Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase. Cell 105 (2001) 473-485
-
(2001)
Cell
, vol.105
, pp. 473-485
-
-
Hopfner, K.P.1
Karcher, A.2
Craig, L.3
Woo, T.T.4
Carney, J.P.5
Tainer, J.A.6
-
13
-
-
0035695023
-
Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans
-
Cromie G.A., Connelly J.C., and Leach D.R. Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans. Mol. Cell 8 (2001) 1163-1174
-
(2001)
Mol. Cell
, vol.8
, pp. 1163-1174
-
-
Cromie, G.A.1
Connelly, J.C.2
Leach, D.R.3
-
14
-
-
0036276388
-
The Mre11 complex: at the crossroads of dna repair and checkpoint signalling
-
D'Amours D., and Jackson S.P. The Mre11 complex: at the crossroads of dna repair and checkpoint signalling. Nat. Rev. Mol. Cell Biol. 3 (2002) 317-327
-
(2002)
Nat. Rev. Mol. Cell Biol.
, vol.3
, pp. 317-327
-
-
D'Amours, D.1
Jackson, S.P.2
-
15
-
-
19344370467
-
Mechanism of DNA double-strand break repair by non-homologous end joining
-
Hefferin M.L., and Tomkinson A.E. Mechanism of DNA double-strand break repair by non-homologous end joining. DNA Repair 4 (2005) 639-648
-
(2005)
DNA Repair
, vol.4
, pp. 639-648
-
-
Hefferin, M.L.1
Tomkinson, A.E.2
-
16
-
-
0038799991
-
Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
-
Paques F., and Haber J.E. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 63 (1999) 349-404
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 349-404
-
-
Paques, F.1
Haber, J.E.2
-
17
-
-
34347379540
-
Additive effects of SbcCD and PolX deficiencies in the in vivo repair of DNA double-strand breaks in Deinococcus radiodurans
-
Bentchikou E., Servant P., Coste G., and Sommer S. Additive effects of SbcCD and PolX deficiencies in the in vivo repair of DNA double-strand breaks in Deinococcus radiodurans. J. Bacteriol. 189 (2007) 4784-4790
-
(2007)
J. Bacteriol.
, vol.189
, pp. 4784-4790
-
-
Bentchikou, E.1
Servant, P.2
Coste, G.3
Sommer, S.4
-
18
-
-
0028857690
-
Structural and functional similarities between the SbcCD proteins of Escherichia coli and the RAD50 and MRE11 (RAD32) recombination and repair proteins of yeast
-
Sharples G.J., and Leach D.R. Structural and functional similarities between the SbcCD proteins of Escherichia coli and the RAD50 and MRE11 (RAD32) recombination and repair proteins of yeast. Mol. Microbiol. 17 (1995) 1215-1217
-
(1995)
Mol. Microbiol.
, vol.17
, pp. 1215-1217
-
-
Sharples, G.J.1
Leach, D.R.2
-
19
-
-
0000770165
-
Nijmegen breakage syndrome. The International Nijmegen Breakage Syndrome Study Group
-
Nijmegen breakage syndrome. The International Nijmegen Breakage Syndrome Study Group. Arch. Dis. Child. 82 (2000) 400-406
-
(2000)
Arch. Dis. Child.
, vol.82
, pp. 400-406
-
-
-
20
-
-
0008158443
-
Radiosensitivity in ataxia-telangiectasia: a new explanation
-
Painter R.B., and Young B.R. Radiosensitivity in ataxia-telangiectasia: a new explanation. Proc. Natl Acad. Sci. USA 77 (1980) 7315-7317
-
(1980)
Proc. Natl Acad. Sci. USA
, vol.77
, pp. 7315-7317
-
-
Painter, R.B.1
Young, B.R.2
-
21
-
-
0033544724
-
The DNA double-strand break repair gene hMRE11 is mutated in individuals with an ataxia-telangiectasia-like disorder
-
Stewart G.S., Maser R.S., Stankovic T., Bressan D.A., Kaplan M.I., Jaspers N.G., et al. The DNA double-strand break repair gene hMRE11 is mutated in individuals with an ataxia-telangiectasia-like disorder. Cell 99 (1999) 577-587
-
(1999)
Cell
, vol.99
, pp. 577-587
-
-
Stewart, G.S.1
Maser, R.S.2
Stankovic, T.3
Bressan, D.A.4
Kaplan, M.I.5
Jaspers, N.G.6
-
22
-
-
0041689960
-
The fission yeast Rad32 (Mre11)-Rad50-Nbs1 complex is required for the S-phase DNA damage checkpoint
-
Chahwan C., Nakamura T.M., Sivakumar S., Russell P., and Rhind N. The fission yeast Rad32 (Mre11)-Rad50-Nbs1 complex is required for the S-phase DNA damage checkpoint. Mol. Cell. Biol. 23 (2003) 6564-6573
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 6564-6573
-
-
Chahwan, C.1
Nakamura, T.M.2
Sivakumar, S.3
Russell, P.4
Rhind, N.5
-
23
-
-
56649086648
-
Aberrations of the MRE11-RAD50-NBS1 DNA damage sensor complex in human breast cancer: MRE11 as a candidate familial cancer-predisposing gene
-
Bartkova J., Tommiska J., Oplustilova L., Aaltonen K., Tamminen A., Heikkinen T., et al. Aberrations of the MRE11-RAD50-NBS1 DNA damage sensor complex in human breast cancer: MRE11 as a candidate familial cancer-predisposing gene. Mol. Oncol. 2 (2008) 296-316
-
(2008)
Mol. Oncol.
, vol.2
, pp. 296-316
-
-
Bartkova, J.1
Tommiska, J.2
Oplustilova, L.3
Aaltonen, K.4
Tamminen, A.5
Heikkinen, T.6
-
24
-
-
33845653602
-
Radiosensitization of head/neck squamous cell carcinoma by adenovirus-mediated expression of the Nbs1 protein
-
Rhee J.G., Li D., Suntharalingam M., Guo C., O'Malley Jr. B.W., and Carney J.P. Radiosensitization of head/neck squamous cell carcinoma by adenovirus-mediated expression of the Nbs1 protein. Int. J. Radiat. Oncol. Biol. Phys. 67 (2007) 273-278
-
(2007)
Int. J. Radiat. Oncol. Biol. Phys.
, vol.67
, pp. 273-278
-
-
Rhee, J.G.1
Li, D.2
Suntharalingam, M.3
Guo, C.4
O'Malley Jr., B.W.5
Carney, J.P.6
-
25
-
-
0035692142
-
Overlapping functions of the Saccharomyces cerevisiae Mre11, Exo1 and Rad27 nucleases in DNA metabolism
-
Moreau S., Morgan E.A., and Symington L.S. Overlapping functions of the Saccharomyces cerevisiae Mre11, Exo1 and Rad27 nucleases in DNA metabolism. Genetics 159 (2001) 1423-1433
-
(2001)
Genetics
, vol.159
, pp. 1423-1433
-
-
Moreau, S.1
Morgan, E.A.2
Symington, L.S.3
-
26
-
-
3042660144
-
Structural and functional analysis of Mre11-3
-
Arthur L.M., Gustausson K., Hopfner K.P., Carson C.T., Stracker T.H., Karcher A., et al. Structural and functional analysis of Mre11-3. Nucleic Acids Res. 32 (2004) 1886-1893
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1886-1893
-
-
Arthur, L.M.1
Gustausson, K.2
Hopfner, K.P.3
Carson, C.T.4
Stracker, T.H.5
Karcher, A.6
-
27
-
-
52949149420
-
Mre11 dimers coordinate DNA end bridging and nuclease processing in double-strand-break repair
-
Williams R.S., Moncalian G., Williams J.S., Yamada Y., Limbo O., Shin D.S., et al. Mre11 dimers coordinate DNA end bridging and nuclease processing in double-strand-break repair. Cell 135 (2008) 97-109
-
(2008)
Cell
, vol.135
, pp. 97-109
-
-
Williams, R.S.1
Moncalian, G.2
Williams, J.S.3
Yamada, Y.4
Limbo, O.5
Shin, D.S.6
-
28
-
-
38549146894
-
The Pfam protein families database
-
Finn R.D., Tate J., Mistry J., Coggill P.C., Sammut S.J., Hotz H.R., et al. The Pfam protein families database. Nucleic Acids Res 36 (2008) D281-D288
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Finn, R.D.1
Tate, J.2
Mistry, J.3
Coggill, P.C.4
Sammut, S.J.5
Hotz, H.R.6
-
29
-
-
33846033400
-
CDD: a conserved domain database for interactive domain family analysis
-
Marchler-Bauer A., Anderson J.B., Derbyshire M.K., DeWeese-Scott C., Gonzales N.R., Gwadz M., et al. CDD: a conserved domain database for interactive domain family analysis. Nucleic Acids Res. 35 (2007) D237-D240
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Derbyshire, M.K.3
DeWeese-Scott, C.4
Gonzales, N.R.5
Gwadz, M.6
-
30
-
-
0032529457
-
Phosphoesterase domains associated with DNA polymerases of diverse origins
-
Aravind L., and Koonin E.V. Phosphoesterase domains associated with DNA polymerases of diverse origins. Nucleic Acids Res. 26 (1998) 3746-3752
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 3746-3752
-
-
Aravind, L.1
Koonin, E.V.2
-
31
-
-
0032493294
-
The SbcCD nuclease of Escherichia coli is a structural maintenance of chromosomes (SMC) family protein that cleaves hairpin DNA
-
Connelly J.C., Kirkham L.A., and Leach D.R. The SbcCD nuclease of Escherichia coli is a structural maintenance of chromosomes (SMC) family protein that cleaves hairpin DNA. Proc. Natl Acad. Sci. USA 95 (1998) 7969-7974
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 7969-7974
-
-
Connelly, J.C.1
Kirkham, L.A.2
Leach, D.R.3
-
32
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
33
-
-
0028103275
-
The CCP4 suite: programs for protein crystallography
-
Collaborative Computing Project Number 4
-
Collaborative Computing Project Number 4. The CCP4 suite: programs for protein crystallography. Acta Crystallogr. D 50 (1994) 760-763
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 760-763
-
-
-
34
-
-
0032031476
-
Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of gammaB- and betaB2-crystallin
-
Tickle I.J., Laskowski R.A., and Moss D.S. Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of gammaB- and betaB2-crystallin. Acta Crystallogr. D 54 (1998) 243-252
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 243-252
-
-
Tickle, I.J.1
Laskowski, R.A.2
Moss, D.S.3
-
35
-
-
0014432781
-
Solvent content of protein crystals
-
Matthews B.W. Solvent content of protein crystals. J. Mol. Biol. 33 (1968) 491-497
-
(1968)
J. Mol. Biol.
, vol.33
, pp. 491-497
-
-
Matthews, B.W.1
-
36
-
-
3242886389
-
MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes
-
Davis I.W., Murray L.W., Richardson J.S., and Richardson D.C. MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes. Nucleic Acids Res. 32 (2004) W615-W619
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Davis, I.W.1
Murray, L.W.2
Richardson, J.S.3
Richardson, D.C.4
-
37
-
-
0034719372
-
DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination
-
Mol C.D., Izumi T., Mitra S., and Tainer J.A. DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination. Nature 403 (2000) 451-456
-
(2000)
Nature
, vol.403
, pp. 451-456
-
-
Mol, C.D.1
Izumi, T.2
Mitra, S.3
Tainer, J.A.4
-
38
-
-
0029133116
-
X-ray structure of calcineurin inhibited by the immunophilin-immunosuppressant FKBP12-FK506 complex
-
Griffith J.P., Kim J.L., Kim E.E., Sintchak M.D., Thomson J.A., Fitzgibbon M.J., et al. X-ray structure of calcineurin inhibited by the immunophilin-immunosuppressant FKBP12-FK506 complex. Cell 82 (1995) 507-522
-
(1995)
Cell
, vol.82
, pp. 507-522
-
-
Griffith, J.P.1
Kim, J.L.2
Kim, E.E.3
Sintchak, M.D.4
Thomson, J.A.5
Fitzgibbon, M.J.6
-
39
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
40
-
-
0032127358
-
The Biology Workbench - a seamless database and analysis environment for the biologist. Proteins:
-
Subramaniam S. The Biology Workbench - a seamless database and analysis environment for the biologist. Proteins:. Struct. Funct. Genet. 32 (1998) 1-2
-
(1998)
Struct. Funct. Genet.
, vol.32
, pp. 1-2
-
-
Subramaniam, S.1
-
41
-
-
0031715982
-
Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
-
Shindyalov I.N., and Bourne P.E. Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. Protein Eng. 11 (1998) 739-747
-
(1998)
Protein Eng.
, vol.11
, pp. 739-747
-
-
Shindyalov, I.N.1
Bourne, P.E.2
-
42
-
-
0032961270
-
ESPript: analysis of multiple sequence alignments in PostScript
-
Gouet P., Courcelle E., Stuart D.I., and Metoz F. ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 15 (1999) 305-308
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
43
-
-
0033824470
-
DaliLite workbench for protein structure comparison
-
Holm L., and Park J. DaliLite workbench for protein structure comparison. Bioinformatics 16 (2000) 566-567
-
(2000)
Bioinformatics
, vol.16
, pp. 566-567
-
-
Holm, L.1
Park, J.2
-
44
-
-
0031664401
-
Alteration of N-terminal phosphoesterase signature motifs inactivates Saccharomyces cerevisiae Mre11
-
Bressan D.A., Olivares H.A., Nelms B.E., and Petrini J.H. Alteration of N-terminal phosphoesterase signature motifs inactivates Saccharomyces cerevisiae Mre11. Genetics 150 (1998) 591-600
-
(1998)
Genetics
, vol.150
, pp. 591-600
-
-
Bressan, D.A.1
Olivares, H.A.2
Nelms, B.E.3
Petrini, J.H.4
-
45
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel E., and Henrick K. Inference of macromolecular assemblies from crystalline state. J. Mol. Biol. 372 (2007) 774-797
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
46
-
-
23144448512
-
ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures
-
Landau M., Mayrose I., Rosenberg Y., Glaser F., Martz E., Pupko T., and Ben-Tal N. ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures. Nucleic Acids Res. 33 (2005) W299-W302
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Landau, M.1
Mayrose, I.2
Rosenberg, Y.3
Glaser, F.4
Martz, E.5
Pupko, T.6
Ben-Tal, N.7
-
47
-
-
0035839032
-
Structure and mechanism of the RuvB Holliday junction branch migration motor
-
Putnam C.D., Clancy S.B., Tsuruta H., Gonzalez S., Wetmur J.G., and Tainer J.A. Structure and mechanism of the RuvB Holliday junction branch migration motor. J. Mol. Biol. 311 (2001) 297-310
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 297-310
-
-
Putnam, C.D.1
Clancy, S.B.2
Tsuruta, H.3
Gonzalez, S.4
Wetmur, J.G.5
Tainer, J.A.6
-
48
-
-
20144386860
-
Structural insights into the first incision reaction during nucleotide excision repair
-
Truglio J.J., Rhau B., Croteau D.L., Wang L., Skorvaga M., Karakas E., et al. Structural insights into the first incision reaction during nucleotide excision repair. EMBO J. 24 (2005) 885-894
-
(2005)
EMBO J.
, vol.24
, pp. 885-894
-
-
Truglio, J.J.1
Rhau, B.2
Croteau, D.L.3
Wang, L.4
Skorvaga, M.5
Karakas, E.6
-
49
-
-
59649084642
-
Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair
-
Dalhus B., Arvai A.S., Rosnes I., Olsen O.E., Backe P.H., Alseth I., et al. Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair. Nat. Struct. Mol. Biol. 16 (2009) 138-143
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 138-143
-
-
Dalhus, B.1
Arvai, A.S.2
Rosnes, I.3
Olsen, O.E.4
Backe, P.H.5
Alseth, I.6
-
50
-
-
0037398027
-
Rad50/SMC proteins and ABC transporters: unifying concepts from high-resolution structures
-
Hopfner K.P., and Tainer J.A. Rad50/SMC proteins and ABC transporters: unifying concepts from high-resolution structures. Curr. Opin. Struct. Biol. 13 (2003) 249-255
-
(2003)
Curr. Opin. Struct. Biol.
, vol.13
, pp. 249-255
-
-
Hopfner, K.P.1
Tainer, J.A.2
-
51
-
-
0037015054
-
Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline
-
Lesley S.A., Kuhn P., Godzik A., Deacon A.M., Mathews I., Kreusch A., et al. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc. Natl Acad. Sci. USA 99 (2002) 11664-11669
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 11664-11669
-
-
Lesley, S.A.1
Kuhn, P.2
Godzik, A.3
Deacon, A.M.4
Mathews, I.5
Kreusch, A.6
-
52
-
-
41149148236
-
Combining the polymerase incomplete primer extension method for cloning and mutagenesis with microscreening to accelerate structural genomics efforts. Proteins
-
Klock H.E., Koesema E.J., Knuth M.W., and Lesley S.A. Combining the polymerase incomplete primer extension method for cloning and mutagenesis with microscreening to accelerate structural genomics efforts. Proteins. Struct. Funct. Genet. 71 (2008) 982-994
-
(2008)
Struct. Funct. Genet.
, vol.71
, pp. 982-994
-
-
Klock, H.E.1
Koesema, E.J.2
Knuth, M.W.3
Lesley, S.A.4
-
53
-
-
18344375268
-
An approach to rapid protein crystallization using nanodroplets
-
Santarsiero B.D., Yegian D.T., Lee C.C., Spraggon G., Gu J., Scheibe D., et al. An approach to rapid protein crystallization using nanodroplets. J. Appl. Crystallogr. 35 (2002) 278-281
-
(2002)
J. Appl. Crystallogr.
, vol.35
, pp. 278-281
-
-
Santarsiero, B.D.1
Yegian, D.T.2
Lee, C.C.3
Spraggon, G.4
Gu, J.5
Scheibe, D.6
-
54
-
-
0036896410
-
An automated system to mount cryo-cooled protein crystals on a synchrotron beamline, using compact sample cassettes and a small-scale robot
-
Cohen A.E., Ellis P.J., Miller M.D., Deacon A.M., and Phizackerley R.P. An automated system to mount cryo-cooled protein crystals on a synchrotron beamline, using compact sample cassettes and a small-scale robot. J. Appl. Crystallogr. 2002 (2002) 720-726
-
(2002)
J. Appl. Crystallogr.
, vol.2002
, pp. 720-726
-
-
Cohen, A.E.1
Ellis, P.J.2
Miller, M.D.3
Deacon, A.M.4
Phizackerley, R.P.5
-
55
-
-
0036849859
-
Blu-Ice and the Distributed Control System: software for data acquisition and instrument control at macromolecular crystallography beamlines
-
McPhillips T.M., McPhillips S.E., Chiu H.J., Cohen A.E., Deacon A.M., Ellis P.J., et al. Blu-Ice and the Distributed Control System: software for data acquisition and instrument control at macromolecular crystallography beamlines. J. Synchrotron Radiat. 9 (2002) 401-406
-
(2002)
J. Synchrotron Radiat.
, vol.9
, pp. 401-406
-
-
McPhillips, T.M.1
McPhillips, S.E.2
Chiu, H.J.3
Cohen, A.E.4
Deacon, A.M.5
Ellis, P.J.6
-
56
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch W. Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Crystallogr. 26 (1993) 795-800
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
59
-
-
0033896691
-
Maximum-likelihood density modification
-
Terwilliger T.C. Maximum-likelihood density modification. Acta Crystallogr. D 56 (2000) 965-972
-
(2000)
Acta Crystallogr. D
, vol.56
, pp. 965-972
-
-
Terwilliger, T.C.1
-
60
-
-
0038793604
-
Improving macromolecular atomic models at moderate resolution by automated iterative model building, statistical density modification and refinement
-
Terwilliger T.C. Improving macromolecular atomic models at moderate resolution by automated iterative model building, statistical density modification and refinement. Acta Crystallogr. D 59 (2003) 1174-1182
-
(2003)
Acta Crystallogr. D
, vol.59
, pp. 1174-1182
-
-
Terwilliger, T.C.1
-
61
-
-
0003076963
-
Recent changes to the MOSFLM package for processing film and image plate data
-
Leslie, A. G. W. (1992). Recent changes to the MOSFLM package for processing film and image plate data. Joint CCP4+ESF-EAMCB Newsletter Protein Crystallogr. No. 26.
-
(1992)
Joint CCP4+ESF-EAMCB Newsletter Protein Crystallogr
, Issue.26
-
-
Leslie, A.G.W.1
-
62
-
-
13244281317
-
Coot: model-building tools for molecular graphics
-
Emsley P., and Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr. D 60 (2004) 2126-2132
-
(2004)
Acta Crystallogr. D
, vol.60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
63
-
-
0013461295
-
Macromolecular TLS refinement in REFMAC at moderate resolutions
-
Winn M.D., Murshudov G.N., and Papiz M.Z. Macromolecular TLS refinement in REFMAC at moderate resolutions. Methods Enzymol. 374 (2003) 300-321
-
(2003)
Methods Enzymol.
, vol.374
, pp. 300-321
-
-
Winn, M.D.1
Murshudov, G.N.2
Papiz, M.Z.3
-
64
-
-
16644393507
-
Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank
-
Yang H., Guranovic V., Dutta S., Feng Z., Berman H.M., and Westbrook J.D. Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank. Acta Crystallogr. D 60 (2004) 1833-1839
-
(2004)
Acta Crystallogr. D
, vol.60
, pp. 1833-1839
-
-
Yang, H.1
Guranovic, V.2
Dutta, S.3
Feng, Z.4
Berman, H.M.5
Westbrook, J.D.6
-
65
-
-
0025398721
-
WHAT IF: a molecular modeling and drug design program
-
Vriend G. WHAT IF: a molecular modeling and drug design program. J. Mol. Graph. 8 (1990) 52-56
-
(1990)
J. Mol. Graph.
, vol.8
, pp. 52-56
-
-
Vriend, G.1
-
66
-
-
0032922193
-
SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model
-
Vaguine A.A., Richelle J., and Wodak S.J. SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model. Acta Crystallogr. D 55 (1999) 191-205
-
(1999)
Acta Crystallogr. D
, vol.55
, pp. 191-205
-
-
Vaguine, A.A.1
Richelle, J.2
Wodak, S.J.3
-
67
-
-
0034013435
-
Validation of protein crystal structures
-
Kleywegt G.J. Validation of protein crystal structures. Acta Crystallogr. D 56 (2000) 249-265
-
(2000)
Acta Crystallogr. D
, vol.56
, pp. 249-265
-
-
Kleywegt, G.J.1
-
68
-
-
13444254300
-
PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids
-
Laskowski R.A., Chistyakov V.V., and Thornton J.M. PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids. Nucleic Acids Res. 33 (2005) D266-D268
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Laskowski, R.A.1
Chistyakov, V.V.2
Thornton, J.M.3
-
69
-
-
0842302302
-
-
The PyMOL Molecular Graphics System, Palo Alto, CA, USA www.pymol.org
-
DeLano W.L. DeLano Scientific LLC (2002), The PyMOL Molecular Graphics System, Palo Alto, CA, USA. http://www.pymol.org www.pymol.org
-
(2002)
DeLano Scientific LLC
-
-
DeLano, W.L.1
|