-
1
-
-
0033831330
-
Search and discovery strategies for biotechnology: the paradigm shift
-
10.1128/MMBR.64.3.573-606.2000, 99005, 10974127
-
Bull AT, Ward AC, Goodfellow M. Search and discovery strategies for biotechnology: the paradigm shift. Microbiol Mol Biol Rev 2000, 64:573-606. 10.1128/MMBR.64.3.573-606.2000, 99005, 10974127.
-
(2000)
Microbiol Mol Biol Rev
, vol.64
, pp. 573-606
-
-
Bull, A.T.1
Ward, A.C.2
Goodfellow, M.3
-
2
-
-
0037052564
-
Merging genomes with geochemistry in hydrothermal ecosystems
-
10.1126/science.1072483, 12004120
-
Reysenbach AL, Shock E. Merging genomes with geochemistry in hydrothermal ecosystems. Science 2002, 296:1077-1082. 10.1126/science.1072483, 12004120.
-
(2002)
Science
, vol.296
, pp. 1077-1082
-
-
Reysenbach, A.L.1
Shock, E.2
-
3
-
-
0035142375
-
Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology
-
full_text, 11210495
-
Robb FT, Maeder DL, Brown JR, DiRuggiero J, Stump MD, Yeh RK, Weiss RB, Dunn DM. Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology. Methods Enzymol 2001, 330:134-157. full_text, 11210495.
-
(2001)
Methods Enzymol
, vol.330
, pp. 134-157
-
-
Robb, F.T.1
Maeder, D.L.2
Brown, J.R.3
DiRuggiero, J.4
Stump, M.D.5
Yeh, R.K.6
Weiss, R.B.7
Dunn, D.M.8
-
4
-
-
0032579989
-
Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3
-
10.1093/dnares/5.2.55, 9679194
-
Kawarabayasi Y, Sawada M, Horikawa H, Haikawa Y, Hino Y, Yamamoto S, Sekine M, Baba S, Kosugi H, Hosoyama A, Nagai Y, Sakai M, Ogura K, Otsuka R, Nakazawa H, Takamiya M, Ohfuku Y, Funahashi T, Tanaka T, Kudoh Y, Yamazaki J, Kushida N, Oguchi A, Aoki K, Kikuchi H. Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3. DNA Res 1998, 5:55-76. 10.1093/dnares/5.2.55, 9679194.
-
(1998)
DNA Res
, vol.5
, pp. 55-76
-
-
Kawarabayasi, Y.1
Sawada, M.2
Horikawa, H.3
Haikawa, Y.4
Hino, Y.5
Yamamoto, S.6
Sekine, M.7
Baba, S.8
Kosugi, H.9
Hosoyama, A.10
Nagai, Y.11
Sakai, M.12
Ogura, K.13
Otsuka, R.14
Nakazawa, H.15
Takamiya, M.16
Ohfuku, Y.17
Funahashi, T.18
Tanaka, T.19
Kudoh, Y.20
Yamazaki, J.21
Kushida, N.22
Oguchi, A.23
Aoki, K.24
Kikuchi, H.25
more..
-
5
-
-
0034821951
-
Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea
-
10.1101/gr.GR1653R, 311118, 11381026
-
Lecompte O, Ripp R, Puzos-Barbe V, Duprat S, Heilig R, Dietrich J, Thierry JC, Poch O. Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea. Genome Res 2001, 11:981-993. 10.1101/gr.GR1653R, 311118, 11381026.
-
(2001)
Genome Res
, vol.11
, pp. 981-993
-
-
Lecompte, O.1
Ripp, R.2
Puzos-Barbe, V.3
Duprat, S.4
Heilig, R.5
Dietrich, J.6
Thierry, J.C.7
Poch, O.8
-
6
-
-
49749085907
-
The order Thermococcales
-
New York: Springer Science+Business Media, Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E, Third
-
Bertoldo C, Antranikian G. The order Thermococcales. The Prokaryotes. Archaea. Bacteria: Firmicutes, Actinomycetes 2006, 3:69-81. New York: Springer Science+Business Media, Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E, Third.
-
(2006)
The Prokaryotes. Archaea. Bacteria: Firmicutes, Actinomycetes
, vol.3
, pp. 69-81
-
-
Bertoldo, C.1
Antranikian, G.2
-
7
-
-
84890624644
-
-
Oxford: Blackwell Publishing, Eds
-
Garrett RA, Klenk H-P, . Eds Archaea: Evolution, Physiology, and Molecular Biology 2007, Oxford: Blackwell Publishing, Eds.
-
(2007)
Archaea: Evolution, Physiology, and Molecular Biology
-
-
Garrett, R.A.1
Klenk, H.-.P.2
-
8
-
-
67949103703
-
Pyrococcus CH1, an obligate piezophilic hyperthermophile: extending the upper pressure-temperature limits for life
-
10.1038/ismej.2009.21, 19295639
-
Zeng X, Birrien JL, Fouquet Y, Cherkashov G, Jebbar M, Querellou J, Oger P, Cambon-Bonavita MA, Xiao X, Prieur D. Pyrococcus CH1, an obligate piezophilic hyperthermophile: extending the upper pressure-temperature limits for life. ISME J 2009, 3:873-876. 10.1038/ismej.2009.21, 19295639.
-
(2009)
ISME J
, vol.3
, pp. 873-876
-
-
Zeng, X.1
Birrien, J.L.2
Fouquet, Y.3
Cherkashov, G.4
Jebbar, M.5
Querellou, J.6
Oger, P.7
Cambon-Bonavita, M.A.8
Xiao, X.9
Prieur, D.10
-
9
-
-
0344604534
-
Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences
-
1460691, 10430560
-
Maeder DL, Weiss RB, Dunn DM, Cherry JL, González JM, DiRuggiero J, Robb FT. Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences. Genetics 1999, 152:1299-1305. 1460691, 10430560.
-
(1999)
Genetics
, vol.152
, pp. 1299-1305
-
-
Maeder, D.L.1
Weiss, R.B.2
Dunn, D.M.3
Cherry, J.L.4
González, J.M.5
DiRuggiero, J.6
Robb, F.T.7
-
11
-
-
76249087624
-
Gathering computational genomics and proteomics to unravel adaptive evolution
-
2684141, 19461985
-
Antunes A, Ramos MJ. Gathering computational genomics and proteomics to unravel adaptive evolution. Evol Bioinform Online 2007, 3:207-209. 2684141, 19461985.
-
(2007)
Evol Bioinform Online
, vol.3
, pp. 207-209
-
-
Antunes, A.1
Ramos, M.J.2
-
12
-
-
35348919491
-
The nonsynonymous/synonymous substitution rate ratio versus the radical/conservative replacement rate ratio in the evolution of mammalian genes
-
10.1093/molbev/msm152, 17652332
-
Hanada K, Shiu SH, Li WH. The nonsynonymous/synonymous substitution rate ratio versus the radical/conservative replacement rate ratio in the evolution of mammalian genes. Mol Biol Evol 2007, 24:2235-2241. 10.1093/molbev/msm152, 17652332.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 2235-2241
-
-
Hanada, K.1
Shiu, S.H.2
Li, W.H.3
-
13
-
-
0037171122
-
High pressure effects on biological macromolecules: from structural changes to alteration of cellular processes
-
Balny C, Masson P, Heremans K. High pressure effects on biological macromolecules: from structural changes to alteration of cellular processes. Biochim Biophys Acta 2002, 1595:3-10.
-
(2002)
Biochim Biophys Acta
, vol.1595
, pp. 3-10
-
-
Balny, C.1
Masson, P.2
Heremans, K.3
-
14
-
-
14744303570
-
A comparison of proteins from Pyrococcus furiosus and Pyrococcus abyssi: barophily in the physicochemical properties of amino acids and in the genetic code
-
10.1016/j.gene.2004.10.008, 15716096
-
Di Giulio M. A comparison of proteins from Pyrococcus furiosus and Pyrococcus abyssi: barophily in the physicochemical properties of amino acids and in the genetic code. Gene 2005, 346:1-6. 10.1016/j.gene.2004.10.008, 15716096.
-
(2005)
Gene
, vol.346
, pp. 1-6
-
-
Di Giulio, M.1
-
15
-
-
0022445886
-
Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100°C
-
Fiala G, Stetter KO. Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100°C. Arch Microbiol 1986, 145:56-61.
-
(1986)
Arch Microbiol
, vol.145
, pp. 56-61
-
-
Fiala, G.1
Stetter, K.O.2
-
16
-
-
8744312877
-
A proposal to rename the hyperthermophile Pyrococcus woesei as Pyrococcus furiosus subsp. woesei
-
10.1155/2004/513563, 2685572, 15810438
-
Kanoksilapatham W, González JM, Maeder DL, DiRuggiero J, Robb FT. A proposal to rename the hyperthermophile Pyrococcus woesei as Pyrococcus furiosus subsp. woesei. Archaea 2004, 1:277-283. 10.1155/2004/513563, 2685572, 15810438.
-
(2004)
Archaea
, vol.1
, pp. 277-283
-
-
Kanoksilapatham, W.1
González, J.M.2
Maeder, D.L.3
DiRuggiero, J.4
Robb, F.T.5
-
17
-
-
0028929082
-
Minimal Amino Acid Requirements of the Hyperthermophilic Archaeon Pyrococcus abyssi, Isolated from Deep-Sea Hydrothermal Vents
-
1388395, 16534963
-
Watrin L, Martin-Jezequel V, Prieur D. Minimal Amino Acid Requirements of the Hyperthermophilic Archaeon Pyrococcus abyssi, Isolated from Deep-Sea Hydrothermal Vents. Appl Environ Microbiol 1995, 61:1138-1140. 1388395, 16534963.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1138-1140
-
-
Watrin, L.1
Martin-Jezequel, V.2
Prieur, D.3
-
18
-
-
27144461686
-
Metabolic and evolutionary relationships among Pyrococcus Species: genetic exchange within a hydrothermal vent environment
-
10.1128/JB.187.21.7492-7499.2005, 1272969, 16237032
-
Hamilton-Brehm SD, Schut GJ, Adams MW. Metabolic and evolutionary relationships among Pyrococcus Species: genetic exchange within a hydrothermal vent environment. J Bacteriol 2005, 187:7492-7499. 10.1128/JB.187.21.7492-7499.2005, 1272969, 16237032.
-
(2005)
J Bacteriol
, vol.187
, pp. 7492-7499
-
-
Hamilton-Brehm, S.D.1
Schut, G.J.2
Adams, M.W.3
-
19
-
-
54949117177
-
Extensive genome rearrangements and multiple horizontal gene transfers in a population of pyrococcus isolates from Vulcano Island, Italy
-
10.1128/AEM.01024-08, 2570278, 18723649
-
White JR, Escobar-Paramo P, Mongodin EF, Nelson KE, DiRuggiero J. Extensive genome rearrangements and multiple horizontal gene transfers in a population of pyrococcus isolates from Vulcano Island, Italy. Appl Environ Microbiol 2008, 74:6447-6451. 10.1128/AEM.01024-08, 2570278, 18723649.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 6447-6451
-
-
White, J.R.1
Escobar-Paramo, P.2
Mongodin, E.F.3
Nelson, K.E.4
DiRuggiero, J.5
-
20
-
-
0033670249
-
Horizontal gene transfer in bacterial and archaeal complete genomes
-
10.1101/gr.130000, 310969, 11076857
-
Garcia-Vallve S, Romeu A, Palau J. Horizontal gene transfer in bacterial and archaeal complete genomes. Genome Res 2000, 10:1719-1725. 10.1101/gr.130000, 310969, 11076857.
-
(2000)
Genome Res
, vol.10
, pp. 1719-1725
-
-
Garcia-Vallve, S.1
Romeu, A.2
Palau, J.3
-
21
-
-
0037250391
-
HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes
-
10.1093/nar/gkg004, 165451, 12519978
-
Garcia-Vallve S, Guzman E, Montero MA, Romeu A. HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes. Nucleic Acids Res 2003, 31:187-189. 10.1093/nar/gkg004, 165451, 12519978.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 187-189
-
-
Garcia-Vallve, S.1
Guzman, E.2
Montero, M.A.3
Romeu, A.4
-
22
-
-
57549110267
-
Protein evolution in deep sea bacteria: an analysis of amino acids substitution rates
-
10.1186/1471-2148-8-313, 2600651, 19014525
-
Campanaro S, Treu L, Valle G. Protein evolution in deep sea bacteria: an analysis of amino acids substitution rates. BMC Evol Biol 2008, 8:313. 10.1186/1471-2148-8-313, 2600651, 19014525.
-
(2008)
BMC Evol Biol
, vol.8
, pp. 313
-
-
Campanaro, S.1
Treu, L.2
Valle, G.3
-
23
-
-
0033032172
-
The effects of hydrostatic pressure on ribosome conformation in Escherichia coli: and in vivo study using differential scanning calorimetry
-
10.1099/13500872-145-2-419, 10075424
-
Niven GW, Miles CA, Mackey BM. The effects of hydrostatic pressure on ribosome conformation in Escherichia coli: and in vivo study using differential scanning calorimetry. Microbiology 1999, 145:419-425. 10.1099/13500872-145-2-419, 10075424.
-
(1999)
Microbiology
, vol.145
, pp. 419-425
-
-
Niven, G.W.1
Miles, C.A.2
Mackey, B.M.3
-
24
-
-
47249162075
-
Changes in Transcription and Protein Profile Induced by High Hydrostatic Pressure Treatment in Micro-Organisms
-
Palhano FL, Foguel D, Lindsey GG, Fernandes PMB. Changes in Transcription and Protein Profile Induced by High Hydrostatic Pressure Treatment in Micro-Organisms. Current Proteomics 2008, 5:138-145.
-
(2008)
Current Proteomics
, vol.5
, pp. 138-145
-
-
Palhano, F.L.1
Foguel, D.2
Lindsey, G.G.3
Fernandes, P.M.B.4
-
25
-
-
33748749355
-
Piezophilic adaptation: a genomic point of view
-
10.1016/j.jbiotec.2006.03.038, 16780980
-
Simonato F, Campanaro S, Lauro FM, Vezzi A, D'Angelo M, Vitulo N, Valle G, Bartlett DH. Piezophilic adaptation: a genomic point of view. J Biotechnol 2006, 126:11-25. 10.1016/j.jbiotec.2006.03.038, 16780980.
-
(2006)
J Biotechnol
, vol.126
, pp. 11-25
-
-
Simonato, F.1
Campanaro, S.2
Lauro, F.M.3
Vezzi, A.4
D'Angelo, M.5
Vitulo, N.6
Valle, G.7
Bartlett, D.H.8
-
26
-
-
27744544657
-
Transcriptional response reveals translation machinery as target for high pressure in Lactobacillus sanfranciscensis
-
10.1007/s00203-005-0021-4, 16044264
-
Pavlovic M, Hörmann S, Vogel RF, Ehrmann MA. Transcriptional response reveals translation machinery as target for high pressure in Lactobacillus sanfranciscensis. Arch Microbiol 2005, 184:11-17. 10.1007/s00203-005-0021-4, 16044264.
-
(2005)
Arch Microbiol
, vol.184
, pp. 11-17
-
-
Pavlovic, M.1
Hörmann, S.2
Vogel, R.F.3
Ehrmann, M.A.4
-
27
-
-
0034885332
-
Cellobiose uptake in the hyperthermophilic archaeon Pyrococcus furiosus is mediated by an inducible, high-affinity ABC transporter
-
10.1128/JB.183.17.4979-4984.2001, 95372, 11489849
-
Koning SM, Elferink MG, Konings WN, Driessen AJ. Cellobiose uptake in the hyperthermophilic archaeon Pyrococcus furiosus is mediated by an inducible, high-affinity ABC transporter. J Bacteriol 2001, 183:4979-4984. 10.1128/JB.183.17.4979-4984.2001, 95372, 11489849.
-
(2001)
J Bacteriol
, vol.183
, pp. 4979-4984
-
-
Koning, S.M.1
Elferink, M.G.2
Konings, W.N.3
Driessen, A.J.4
-
28
-
-
33749046141
-
Origins of life and biochemistry under high-pressure conditions
-
10.1039/b517766a, 17003893
-
Daniel I, Oger P, Winter R. Origins of life and biochemistry under high-pressure conditions. Chem Soc Rev 2006, 35:858-875. 10.1039/b517766a, 17003893.
-
(2006)
Chem Soc Rev
, vol.35
, pp. 858-875
-
-
Daniel, I.1
Oger, P.2
Winter, R.3
-
29
-
-
0022578265
-
Structure, biosynthesis, and physicochemical properties of archaebacterial lipids
-
373054, 3083222
-
De Rosa M, Gambacorta A, Gliozzi A. Structure, biosynthesis, and physicochemical properties of archaebacterial lipids. Microbiol Rev 1986, 50:70-80. 373054, 3083222.
-
(1986)
Microbiol Rev
, vol.50
, pp. 70-80
-
-
De Rosa, M.1
Gambacorta, A.2
Gliozzi, A.3
-
30
-
-
0034267919
-
Adaptations of the archaeal cell membrane to heat stress
-
10.2741/albers, 10966867
-
Albers SV, Vossenberg JL, Driessen AJ, Konings WN. Adaptations of the archaeal cell membrane to heat stress. Front Biosci 2000, 5:D813-D820. 10.2741/albers, 10966867.
-
(2000)
Front Biosci
, vol.5
-
-
Albers, S.V.1
Vossenberg, J.L.2
Driessen, A.J.3
Konings, W.N.4
-
31
-
-
28244438390
-
Recent advances in structural research on ether lipids from archaea including comparative and physiological aspects
-
10.1271/bbb.69.2019, 16306681
-
Koga Y, Morii H. Recent advances in structural research on ether lipids from archaea including comparative and physiological aspects. Biosci Biotechnol Biochem 2005, 69:2019-2034. 10.1271/bbb.69.2019, 16306681.
-
(2005)
Biosci Biotechnol Biochem
, vol.69
, pp. 2019-2034
-
-
Koga, Y.1
Morii, H.2
-
33
-
-
0037737997
-
The gene cassette metagenome is a basic resource for bacterial genome evolution
-
10.1046/j.1462-2920.2003.00429.x, 12713464
-
Holmes AJ, Gillings MR, Nield BS, Mabbutt BC, Nevalainen KM, Stokes HW. The gene cassette metagenome is a basic resource for bacterial genome evolution. Environ Microbiol 2003, 5:383-394. 10.1046/j.1462-2920.2003.00429.x, 12713464.
-
(2003)
Environ Microbiol
, vol.5
, pp. 383-394
-
-
Holmes, A.J.1
Gillings, M.R.2
Nield, B.S.3
Mabbutt, B.C.4
Nevalainen, K.M.5
Stokes, H.W.6
-
34
-
-
0019332167
-
How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins
-
10.1016/0022-2836(80)90373-3, 7373651
-
Lesk AM, Chothia C. How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins. J Mol Biol 1980, 136:225-270. 10.1016/0022-2836(80)90373-3, 7373651.
-
(1980)
J Mol Biol
, vol.136
, pp. 225-270
-
-
Lesk, A.M.1
Chothia, C.2
-
35
-
-
0031020765
-
How far can sequence diverge?
-
10.1038/385579a0, 9024652
-
Chothia C, Gerstein M. How far can sequence diverge?. Nature 1997, 385:579-581. 10.1038/385579a0, 9024652.
-
(1997)
Nature
, vol.385
, pp. 579-581
-
-
Chothia, C.1
Gerstein, M.2
-
36
-
-
0029958604
-
A test of the "jigsaw puzzle" model for protein folding by multiple methionine substitutions within the core of T4 lysozyme
-
10.1073/pnas.93.22.12155, 37959, 8901549
-
Gassner NC, Baase WA, Matthews BW. A test of the "jigsaw puzzle" model for protein folding by multiple methionine substitutions within the core of T4 lysozyme. Proc Natl Acad Sci USA 1996, 93:12155-12158. 10.1073/pnas.93.22.12155, 37959, 8901549.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 12155-12158
-
-
Gassner, N.C.1
Baase, W.A.2
Matthews, B.W.3
-
37
-
-
0029980972
-
Active barnase variants with completely random hydrophobic cores
-
10.1073/pnas.93.11.5590, 39291, 8643620
-
Axe DD, Foster NW, Fersht AR. Active barnase variants with completely random hydrophobic cores. Proc Natl Acad Sci USA 1996, 93:5590-5594. 10.1073/pnas.93.11.5590, 39291, 8643620.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 5590-5594
-
-
Axe, D.D.1
Foster, N.W.2
Fersht, A.R.3
-
38
-
-
0037216486
-
Pressure-induced unfolding of the molten globule of all-Ala alpha-lactalbumin
-
10.1110/ps.0221303, 2312399, 12493829
-
Lassalle MW, Li H, Yamada H, Akasaka K, Redfield C. Pressure-induced unfolding of the molten globule of all-Ala alpha-lactalbumin. Protein Sci 2003, 12:66-72. 10.1110/ps.0221303, 2312399, 12493829.
-
(2003)
Protein Sci
, vol.12
, pp. 66-72
-
-
Lassalle, M.W.1
Li, H.2
Yamada, H.3
Akasaka, K.4
Redfield, C.5
-
39
-
-
0042357191
-
Structural instability and fibrillar aggregation of non-expanded human ataxin-3 revealed under high pressure and temperature
-
10.1074/jbc.M304205200, 12766160
-
Marchal S, Shehi E, Harricane MC, Fusi P, Heitz F, Tortora P, Lange R. Structural instability and fibrillar aggregation of non-expanded human ataxin-3 revealed under high pressure and temperature. J Biol Chem 2003, 278:31554-31563. 10.1074/jbc.M304205200, 12766160.
-
(2003)
J Biol Chem
, vol.278
, pp. 31554-31563
-
-
Marchal, S.1
Shehi, E.2
Harricane, M.C.3
Fusi, P.4
Heitz, F.5
Tortora, P.6
Lange, R.7
-
40
-
-
4944249552
-
Use of hydrostatic pressure to produce 'native' monomers of yeast enolase
-
10.1111/j.1432-1033.2004.04326.x, 15373835
-
Kornblatt MJ, Lange R, Balny C. Use of hydrostatic pressure to produce 'native' monomers of yeast enolase. Eur J Biochem 2004, 271:3897-3904. 10.1111/j.1432-1033.2004.04326.x, 15373835.
-
(2004)
Eur J Biochem
, vol.271
, pp. 3897-3904
-
-
Kornblatt, M.J.1
Lange, R.2
Balny, C.3
-
41
-
-
33646520367
-
Modulation of prion protein structure by pressure and temperature
-
Torrent J, Alvarez-Martinez MT, Liautard JP, Lange R. Modulation of prion protein structure by pressure and temperature. Biochim Biophys Acta 2006, 1764:546-551.
-
(2006)
Biochim Biophys Acta
, vol.1764
, pp. 546-551
-
-
Torrent, J.1
Alvarez-Martinez, M.T.2
Liautard, J.P.3
Lange, R.4
-
42
-
-
33748463070
-
Pressure-jump-induced kinetics reveals a hydration dependent folding/unfolding mechanism of ribonuclease A
-
10.1529/biophysj.106.082552, 1557576, 16798802
-
Font J, Torrent J, Ribo M, Laurents DV, Balny C, Vilanova M, Lange R. Pressure-jump-induced kinetics reveals a hydration dependent folding/unfolding mechanism of ribonuclease A. Biophys J 2006, 91:2264-2274. 10.1529/biophysj.106.082552, 1557576, 16798802.
-
(2006)
Biophys J
, vol.91
, pp. 2264-2274
-
-
Font, J.1
Torrent, J.2
Ribo, M.3
Laurents, D.V.4
Balny, C.5
Vilanova, M.6
Lange, R.7
-
43
-
-
14744290820
-
The ocean abysses witnessed the origin of the genetic code
-
10.1016/j.gene.2004.07.045, 15716095
-
Di Giulio M. The ocean abysses witnessed the origin of the genetic code. Gene 2005, 346:7-12. 10.1016/j.gene.2004.07.045, 15716095.
-
(2005)
Gene
, vol.346
, pp. 7-12
-
-
Di Giulio, M.1
-
44
-
-
38549164691
-
GenBank
-
10.1093/nar/gkm929, 2238942, 18073190
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL. GenBank. Nucleic Acids Res 2008, 36:D25-D30. 10.1093/nar/gkm929, 2238942, 18073190.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
45
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogeny
-
10.1093/bioinformatics/17.8.754, 11524383
-
Huelsenbeck JP, Ronquist F. MRBAYES: Bayesian inference of phylogeny. Bioinformatics 2001, 17:754-755. 10.1093/bioinformatics/17.8.754, 11524383.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
46
-
-
0022376704
-
Dating the human-ape split by a molecular clock of mitochondrial DNA
-
10.1007/BF02101694, 3934395
-
Hasegawa M, Kishino H, Yano T. Dating the human-ape split by a molecular clock of mitochondrial DNA. J Mol Evol 1985, 22:160-174. 10.1007/BF02101694, 3934395.
-
(1985)
J Mol Evol
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
47
-
-
55549124188
-
The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism
-
10.1128/JB.00746-08, 2576655, 18790866
-
Lee HS, Kang SG, Bae SS, Lim JK, Cho Y, Kim YJ, Jeon JH, Cha SS, Kwon KK, Kim HT, Park CJ, Lee HW, Kim SI, Chun J, Colwell RR, Kim SJ, Lee JH. The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism. J Bacteriol 2008, 190:7491-7499. 10.1128/JB.00746-08, 2576655, 18790866.
-
(2008)
J Bacteriol
, vol.190
, pp. 7491-7499
-
-
Lee, H.S.1
Kang, S.G.2
Bae, S.S.3
Lim, J.K.4
Cho, Y.5
Kim, Y.J.6
Jeon, J.H.7
Cha, S.S.8
Kwon, K.K.9
Kim, H.T.10
Park, C.J.11
Lee, H.W.12
Kim, S.I.13
Chun, J.14
Colwell, R.R.15
Kim, S.J.16
Lee, J.H.17
-
48
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
49
-
-
0030660581
-
A genomic perspective on protein families
-
10.1126/science.278.5338.631, 9381173
-
Tatusov RL, Koonin EV, Lipman DJ. A genomic perspective on protein families. Science 1997, 278:631-637. 10.1126/science.278.5338.631, 9381173.
-
(1997)
Science
, vol.278
, pp. 631-637
-
-
Tatusov, R.L.1
Koonin, E.V.2
Lipman, D.J.3
-
50
-
-
2442537233
-
Gene regulatory network growth by duplication
-
10.1038/ng1340, 15107850
-
Teichmann SA, Babu MM. Gene regulatory network growth by duplication. Nat Genet 2004, 36:492-496. 10.1038/ng1340, 15107850.
-
(2004)
Nat Genet
, vol.36
, pp. 492-496
-
-
Teichmann, S.A.1
Babu, M.M.2
-
51
-
-
45949107473
-
Recent developments in the MAFFT multiple sequence alignment program
-
10.1093/bib/bbn013, 18372315
-
Katoh K, Toh H. Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform 2008, 9:286-298. 10.1093/bib/bbn013, 18372315.
-
(2008)
Brief Bioinform
, vol.9
, pp. 286-298
-
-
Katoh, K.1
Toh, H.2
-
52
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
10.1093/bioinformatics/btg180, 12912839
-
Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574. 10.1093/bioinformatics/btg180, 12912839.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
53
-
-
0033920569
-
Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA
-
Adachi J, Waddell PJ, Martin W, Hasegawa M. Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA. J Mol Evol 2000, 50:348-358.
-
(2000)
J Mol Evol
, vol.50
, pp. 348-358
-
-
Adachi, J.1
Waddell, P.J.2
Martin, W.3
Hasegawa, M.4
-
54
-
-
38949147846
-
Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea
-
10.1186/1745-6150-2-33, 2222616, 18042280
-
Makarova KS, Sorokin AV, Novichkov PS, Wolf YI, Koonin EV. Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea. Biol Direct 2007, 2:33. 10.1186/1745-6150-2-33, 2222616, 18042280.
-
(2007)
Biol Direct
, vol.2
, pp. 33
-
-
Makarova, K.S.1
Sorokin, A.V.2
Novichkov, P.S.3
Wolf, Y.I.4
Koonin, E.V.5
-
55
-
-
38549126643
-
KEGG for linking genomes to life and the environment
-
10.1093/nar/gkm882, 2238879, 18077471
-
Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y. KEGG for linking genomes to life and the environment. Nucleic Acids Res 2008, 36:D480-D484. 10.1093/nar/gkm882, 2238879, 18077471.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Kanehisa, M.1
Araki, M.2
Goto, S.3
Hattori, M.4
Hirakawa, M.5
Itoh, M.6
Katayama, T.7
Kawashima, S.8
Okuda, S.9
Tokimatsu, T.10
Yamanishi, Y.11
-
56
-
-
58149203231
-
InterPro: the integrative protein signature database
-
10.1093/nar/gkn785, 2686546, 18940856
-
Hunter S, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Das U, Daugherty L, Duquenne L, Finn RD, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Laugraud A, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, Mistry J, Mitchell A, Mulder N, Natale D, Orengo C, Quinn AF, Selengut JD, Sigrist CJ, Thimma M, Thomas PD, Valentin F, Wilson D, Wu CH, Yeats C. InterPro: the integrative protein signature database. Nucleic Acids Res 2009, 37:D211-D215. 10.1093/nar/gkn785, 2686546, 18940856.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Hunter, S.1
Apweiler, R.2
Attwood, T.K.3
Bairoch, A.4
Bateman, A.5
Binns, D.6
Bork, P.7
Das, U.8
Daugherty, L.9
Duquenne, L.10
Finn, R.D.11
Gough, J.12
Haft, D.13
Hulo, N.14
Kahn, D.15
Kelly, E.16
Laugraud, A.17
Letunic, I.18
Lonsdale, D.19
Lopez, R.20
Madera, M.21
Maslen, J.22
McAnulla, C.23
McDowall, J.24
Mistry, J.25
Mitchell, A.26
Mulder, N.27
Natale, D.28
Orengo, C.29
Quinn, A.F.30
Selengut, J.D.31
Sigrist, C.J.32
Thimma, M.33
Thomas, P.D.34
Valentin, F.35
Wilson, D.36
Wu, C.H.37
Yeats, C.38
more..
-
57
-
-
38549146894
-
The Pfam protein families database
-
10.1093/nar/gkm960, 2238907, 18039703
-
Finn RD, Tate J, Mistry J, Coggill PC, Sammut JS, Hotz HR, Ceric G, Forslund K, Eddy SR, Sonnhammer EL, Bateman A. The Pfam protein families database. Nucleic Acids Res 2008, 36:D281-D288. 10.1093/nar/gkm960, 2238907, 18039703.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Finn, R.D.1
Tate, J.2
Mistry, J.3
Coggill, P.C.4
Sammut, J.S.5
Hotz, H.R.6
Ceric, G.7
Forslund, K.8
Eddy, S.R.9
Sonnhammer, E.L.10
Bateman, A.11
-
60
-
-
0031025677
-
Accuracies of ancestral amino acid sequences inferred by the parsimony, likelihood, and distance methods
-
10.1007/PL00000067, 9071022
-
Zhang J, Nei M. Accuracies of ancestral amino acid sequences inferred by the parsimony, likelihood, and distance methods. J Mol Evol 1997, 44:S139-S146. 10.1007/PL00000067, 9071022.
-
(1997)
J Mol Evol
, vol.44
-
-
Zhang, J.1
Nei, M.2
-
61
-
-
0032584099
-
Positive Darwinian selection after gene duplication in primate ribonuclease genes
-
10.1073/pnas.95.7.3708, 19901, 9520431
-
Zhang J, Rosenberg HF, Nei M. Positive Darwinian selection after gene duplication in primate ribonuclease genes. Proc Natl Acad Sci USA 1998, 95:3708-3713. 10.1073/pnas.95.7.3708, 19901, 9520431.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 3708-3713
-
-
Zhang, J.1
Rosenberg, H.F.2
Nei, M.3
-
62
-
-
0033921902
-
Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes
-
Zhang J. Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genes. J Mol Evol 2000, 50:56-68.
-
(2000)
J Mol Evol
, vol.50
, pp. 56-68
-
-
Zhang, J.1
-
63
-
-
47549097539
-
Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution
-
10.1016/j.cell.2008.05.042, 2696314, 18662548
-
Drummond DA, Wilke CO. Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution. Cell 2008, 134:341-352. 10.1016/j.cell.2008.05.042, 2696314, 18662548.
-
(2008)
Cell
, vol.134
, pp. 341-352
-
-
Drummond, D.A.1
Wilke, C.O.2
-
64
-
-
37049026439
-
Amino acid and codon usage profiles: adaptive changes in the frequency of amino acids and codons
-
10.1016/j.gene.2007.09.020, 17977670
-
Goodarzi H, Torabi N, Najafabadi HS, Archetti M. Amino acid and codon usage profiles: adaptive changes in the frequency of amino acids and codons. Gene 2008, 407:30-41. 10.1016/j.gene.2007.09.020, 17977670.
-
(2008)
Gene
, vol.407
, pp. 30-41
-
-
Goodarzi, H.1
Torabi, N.2
Najafabadi, H.S.3
Archetti, M.4
-
65
-
-
0142075815
-
Are Radical and Conservative Substitution Rates Useful Statistics in Molecular Evolution?
-
10.1007/s00239-003-2500-z, 14708579
-
Smith NGC. Are Radical and Conservative Substitution Rates Useful Statistics in Molecular Evolution?. J Mol Evol 2003, 57:467-478. 10.1007/s00239-003-2500-z, 14708579.
-
(2003)
J Mol Evol
, vol.57
, pp. 467-478
-
-
Smith, N.G.C.1
-
66
-
-
34547803197
-
PAML 4: phylogenetic analysis by maximum likelihood
-
10.1093/molbev/msm088, 17483113
-
Yang Z. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol 2007, 24:1586-1591. 10.1093/molbev/msm088, 17483113.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1586-1591
-
-
Yang, Z.1
-
67
-
-
38549155006
-
AAindex: amino acid index database, progress report 2008
-
10.1093/nar/gkm998, 2238890, 17998252
-
Kawashima S, Pokarowski P, Pokarowska M, Kolinski A, Katayama T, Kanehisa M. AAindex: amino acid index database, progress report 2008. Nucleic Acids Res 2008, 36:D202-D205. 10.1093/nar/gkm998, 2238890, 17998252.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Kawashima, S.1
Pokarowski, P.2
Pokarowska, M.3
Kolinski, A.4
Katayama, T.5
Kanehisa, M.6
-
69
-
-
84972545970
-
A Survey of Exact Inference for Contingency Tables
-
Agresti A. A Survey of Exact Inference for Contingency Tables. Statistical Science 1992, 7:131-153.
-
(1992)
Statistical Science
, vol.7
, pp. 131-153
-
-
Agresti, A.1
-
70
-
-
2642641281
-
Pyrococcus horikoshii sp. nov., a hyperthermophilic archaeon isolated from a hydrothermal vent at the Okinawa Trough
-
10.1007/s007920050051, 9672687
-
González JM, Masuchi Y, Robb FT, Ammerman JW, Maeder DL, Yanagibayashi M, Tamaoka J, Kato C. Pyrococcus horikoshii sp. nov., a hyperthermophilic archaeon isolated from a hydrothermal vent at the Okinawa Trough. Extremophiles 1998, 2:123-130. 10.1007/s007920050051, 9672687.
-
(1998)
Extremophiles
, vol.2
, pp. 123-130
-
-
González, J.M.1
Masuchi, Y.2
Robb, F.T.3
Ammerman, J.W.4
Maeder, D.L.5
Yanagibayashi, M.6
Tamaoka, J.7
Kato, C.8
-
71
-
-
0027445161
-
Pyrococcus abyssi sp. nov., a new hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent
-
Erauso G, Reysenbach A-L, Godfroy A, Meunier J-R, Crump B, Partensky F, Baross JA, Marteinsson V, Barbier G, Pace NR, Prieur D. Pyrococcus abyssi sp. nov., a new hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. Arch Microbiol 1993, 160:338-349.
-
(1993)
Arch Microbiol
, vol.160
, pp. 338-349
-
-
Erauso, G.1
Reysenbach, A.-.L.2
Godfroy, A.3
Meunier, J.-.R.4
Crump, B.5
Partensky, F.6
Baross, J.A.7
Marteinsson, V.8
Barbier, G.9
Pace, N.R.10
Prieur, D.11
-
72
-
-
0032924862
-
Thermococcus barophilus sp. nov., a new barophilic and hyperthermophilic archaeon isolated under high hydrostatic pressure from a deep-sea hydrothermal vent
-
Marteinsson VT, Birrien JL, Reysenbach AL, Vernet M, Marie D, Gambacorta A, Messner P, Sleytr UB, Prieur D. Thermococcus barophilus sp. nov., a new barophilic and hyperthermophilic archaeon isolated under high hydrostatic pressure from a deep-sea hydrothermal vent. Int J Syst Bacteriol 1999, 49:351-359.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 351-359
-
-
Marteinsson, V.T.1
Birrien, J.L.2
Reysenbach, A.L.3
Vernet, M.4
Marie, D.5
Gambacorta, A.6
Messner, P.7
Sleytr, U.B.8
Prieur, D.9
-
73
-
-
1642267433
-
Molecular diversity of new Thermococcales isolates from a single area of hydrothermal deep-sea vents as revealed by randomly amplified polymorphic DNA fingerprinting and 16S rRNA gene sequence analysis
-
10.1128/AEM.70.3.1277-1286.2004, 368356, 15006744
-
Lepage E, Marguet E, Geslin C, Matte-Tailliez O, Zillig W, Forterre P, Tailliez P. Molecular diversity of new Thermococcales isolates from a single area of hydrothermal deep-sea vents as revealed by randomly amplified polymorphic DNA fingerprinting and 16S rRNA gene sequence analysis. Appl Environ Microbiol 2004, 70:1277-1286. 10.1128/AEM.70.3.1277-1286.2004, 368356, 15006744.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1277-1286
-
-
Lepage, E.1
Marguet, E.2
Geslin, C.3
Matte-Tailliez, O.4
Zillig, W.5
Forterre, P.6
Tailliez, P.7
-
74
-
-
59249092521
-
Comparison of microbial communities associated with phase-separation-induced hydrothermal fluids at the Yonaguni Knoll IV hydrothermal field, the Southern Okinawa Trough
-
10.1111/j.1574-6941.2008.00636.x, 19159423
-
Nunoura T, Takai K. Comparison of microbial communities associated with phase-separation-induced hydrothermal fluids at the Yonaguni Knoll IV hydrothermal field, the Southern Okinawa Trough. FEMS Microbiol Ecol 2009, 67:351-370. 10.1111/j.1574-6941.2008.00636.x, 19159423.
-
(2009)
FEMS Microbiol Ecol
, vol.67
, pp. 351-370
-
-
Nunoura, T.1
Takai, K.2
-
75
-
-
76249096390
-
Cloning and characterization of a thermostable DNA polymerase gene from a hyperthermophile, Pyrococcus sp. strain NA2 [abstract]
-
Lee JH, Kim YJ, Bae SS, Jeong BC, Kim SJ. Cloning and characterization of a thermostable DNA polymerase gene from a hyperthermophile, Pyrococcus sp. strain NA2 [abstract]. International Marine Biotechnology Conference: 7-12 June 2005; St.John's, Newfoundland, Canada. PS.C08.199
-
International Marine Biotechnology Conference: 7-12 June 2005; St.John's, Newfoundland, Canada. PS.C08.199
-
-
Lee, J.H.1
Kim, Y.J.2
Bae, S.S.3
Jeong, B.C.4
Kim, S.J.5
-
76
-
-
0034194703
-
Physiology and continuous culture of the hyperthermophilic deep-sea vent archaeon Pyrococcus abyssi ST549
-
10.1111/j.1574-6968.2000.tb09093.x, 10779724
-
Godfroy A, Raven NDH, Sharp RJ. Physiology and continuous culture of the hyperthermophilic deep-sea vent archaeon Pyrococcus abyssi ST549. FEMS Microbiology Letters 2000, 186:127-132. 10.1111/j.1574-6968.2000.tb09093.x, 10779724.
-
(2000)
FEMS Microbiology Letters
, vol.186
, pp. 127-132
-
-
Godfroy, A.1
Raven, N.D.H.2
Sharp, R.J.3
-
77
-
-
0036345822
-
Diversity of anaerobic heterotrophic thermophiles isolated from deep-sea hydrothermal vents of the Mid-Atlantic Ridge
-
10.1111/j.1574-6941.2002.tb00971.x, 19709244
-
Wery N, Cambon-Bonavita M-A, Lesongeur F, Barbier G. Diversity of anaerobic heterotrophic thermophiles isolated from deep-sea hydrothermal vents of the Mid-Atlantic Ridge. FEMS Microbiology Ecology 2002, 41:105-114. 10.1111/j.1574-6941.2002.tb00971.x, 19709244.
-
(2002)
FEMS Microbiology Ecology
, vol.41
, pp. 105-114
-
-
Wery, N.1
Cambon-Bonavita, M.-.A.2
Lesongeur, F.3
Barbier, G.4
-
78
-
-
19644369575
-
Continuous Enrichment Culture and Molecular Monitoring to Investigate the Microbial Diversity of Thermophiles Inhabiting Deep-Sea Hydrothermal Ecosystems
-
10.1007/s00284-004-4443-z, 15717222
-
Postec A, Urios L, Lesongeur F, Ollivier B, Querellou J, Godfroy A. Continuous Enrichment Culture and Molecular Monitoring to Investigate the Microbial Diversity of Thermophiles Inhabiting Deep-Sea Hydrothermal Ecosystems. Current Microbiology 2005, 50:138-144. 10.1007/s00284-004-4443-z, 15717222.
-
(2005)
Current Microbiology
, vol.50
, pp. 138-144
-
-
Postec, A.1
Urios, L.2
Lesongeur, F.3
Ollivier, B.4
Querellou, J.5
Godfroy, A.6
-
79
-
-
0035956962
-
A novel microbial habitat in the mid-ocean ridge subseafloor
-
10.1073/pnas.051516098, 30109, 11226209
-
Summit M, Baross JA. A novel microbial habitat in the mid-ocean ridge subseafloor. Proc Natl Acad Sci USA 2001, 98:2158-2163. 10.1073/pnas.051516098, 30109, 11226209.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 2158-2163
-
-
Summit, M.1
Baross, J.A.2
-
80
-
-
0032754142
-
Pyrococcus glycovorans sp. nov., a hyperthermophilic archaeon isolated from the East Pacific Rise
-
Barbier G, Godfroy A, Meunier JR, Querellou J, Cambon MA, Lesongeur F, Grimont PA, Raguenes G. Pyrococcus glycovorans sp. nov., a hyperthermophilic archaeon isolated from the East Pacific Rise. Int J Syst Bacteriol 1999, 49:1829-1837.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 1829-1837
-
-
Barbier, G.1
Godfroy, A.2
Meunier, J.R.3
Querellou, J.4
Cambon, M.A.5
Lesongeur, F.6
Grimont, P.A.7
Raguenes, G.8
-
81
-
-
0030610214
-
Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data
-
Burggraf S, Huber H, Stetter KO. Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data. Int J Syst Bacteriol 1997, 47:657-660.
-
(1997)
Int J Syst Bacteriol
, vol.47
, pp. 657-660
-
-
Burggraf, S.1
Huber, H.2
Stetter, K.O.3
-
82
-
-
70350644763
-
A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates
-
19763742, 10.1007/s00792-009-0278-7
-
Teske A, Edgcomb V, Rivers AR, Thompson JR, de Vera Gomez A, Molyneaux SJ, Wirsen CO. A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates. Extremophiles 2009, 13:905-915. 19763742, 10.1007/s00792-009-0278-7.
-
(2009)
Extremophiles
, vol.13
, pp. 905-915
-
-
Teske, A.1
Edgcomb, V.2
Rivers, A.R.3
Thompson, J.R.4
de Vera Gomez, A.5
Molyneaux, S.J.6
Wirsen, C.O.7
-
83
-
-
0023731964
-
Amino acid side chain parameters for correlation studies in biology and pharmacology
-
Fauchere JL, Charton M, Kier LB, Verloop A, Pliska V. Amino acid side chain parameters for correlation studies in biology and pharmacology. Int J Pept Protein Res 1988, 32:269-278.
-
(1988)
Int J Pept Protein Res
, vol.32
, pp. 269-278
-
-
Fauchere, J.L.1
Charton, M.2
Kier, L.B.3
Verloop, A.4
Pliska, V.5
-
84
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
10.1016/0022-2836(82)90515-0, 7108955
-
Kyte J, Doolittle RF. A simple method for displaying the hydropathic character of a protein. J Mol Biol 1982, 157:105-132. 10.1016/0022-2836(82)90515-0, 7108955.
-
(1982)
J Mol Biol
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
-
85
-
-
0014349825
-
The characterization of amino acid sequences in proteins by statistical methods
-
10.1016/0022-5193(68)90069-6, 5700434
-
Zimmerman JM, Eliezer N, Simha R. The characterization of amino acid sequences in proteins by statistical methods. J Theor Biol 1968, 21:170-201. 10.1016/0022-5193(68)90069-6, 5700434.
-
(1968)
J Theor Biol
, vol.21
, pp. 170-201
-
-
Zimmerman, J.M.1
Eliezer, N.2
Simha, R.3
-
86
-
-
0017157584
-
A simplified representation of protein conformations for rapid simulation of protein folfing
-
10.1016/0022-2836(76)90004-8, 957439
-
Levitt M. A simplified representation of protein conformations for rapid simulation of protein folfing. J Mol Biol 1976, 104:59-107. 10.1016/0022-2836(76)90004-8, 957439.
-
(1976)
J Mol Biol
, vol.104
, pp. 59-107
-
-
Levitt, M.1
-
87
-
-
0016197604
-
Amino acid difference formula to help explain protein evolution
-
10.1126/science.185.4154.862, 4843792
-
Grantham R. Amino acid difference formula to help explain protein evolution. Science 1974, 185:862-864. 10.1126/science.185.4154.862, 4843792.
-
(1974)
Science
, vol.185
, pp. 862-864
-
-
Grantham, R.1
|