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Volumn 31, Issue 1, 2003, Pages 187-189

HGT-DB: A database of putative horizontally transferred genes in prokaryotic complete genomes

Author keywords

[No Author keywords available]

Indexed keywords

CYTOSINE; GUANINE;

EID: 0037250391     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg004     Document Type: Review
Times cited : (201)

References (18)
  • 1
    • 0034780910 scopus 로고    scopus 로고
    • Horizontal gene transfer in prokaryotes: Quantification and Classification
    • Koonin,E.V., Makarova,K.S. and Aravind,L. (2001) Horizontal gene transfer in prokaryotes: Quantification and Classification. Annu. Rev. Microbiol., 55, 709-742.
    • (2001) Annu. Rev. Microbiol. , vol.55 , pp. 709-742
    • Koonin, E.V.1    Makarova, K.S.2    Aravind, L.3
  • 2
    • 0033669672 scopus 로고    scopus 로고
    • Horizontal gene transfer among microbial genomes: New insights from complete genome analysis
    • Eisen,J.A. (2000) Horizontal gene transfer among microbial genomes: new insights from complete genome analysis. Curr. Opin. Genet. Dev., 10, 606-611.
    • (2000) Curr. Opin. Genet. Dev. , vol.10 , pp. 606-611
    • Eisen, J.A.1
  • 3
    • 0035546223 scopus 로고    scopus 로고
    • Detection of lateral gene transfer among microbial genomes
    • Ragan,M.A. (2001) Detection of lateral gene transfer among microbial genomes. Curr. Opin. Genet. Dev., 11, 620-626.
    • (2001) Curr. Opin. Genet. Dev. , vol.11 , pp. 620-626
    • Ragan, M.A.1
  • 5
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman,H., Lawrence,J.G. and Groisman,E.A. (2000) Lateral gene transfer and the nature of bacterial innovation. Nature, 405, 299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 6
    • 0033670249 scopus 로고    scopus 로고
    • Horizontal gene transfer in bacterial and archaeal complete genomes
    • Garcia-Vallve,S., Romeu,A. and Palau,J. (2000) Horizontal gene transfer in bacterial and archaeal complete genomes. Genome Res., 10, 1719-1725.
    • (2000) Genome Res. , vol.10 , pp. 1719-1725
    • Garcia-Vallve, S.1    Romeu, A.2    Palau, J.3
  • 7
    • 0036145420 scopus 로고    scopus 로고
    • Reconciling the many faces of lateral gene transfer
    • Lawrence,J.G. and Ochman,H. (2002) Reconciling the many faces of lateral gene transfer. Trends Microbiol., 10, 1-4.
    • (2002) Trends Microbiol. , vol.10 , pp. 1-4
    • Lawrence, J.G.1    Ochman, H.2
  • 8
    • 0032870331 scopus 로고    scopus 로고
    • Horizontal gene transfer in glycosyl hydrolases inferred from codon usage in Escherichia coli and Bacillus subtilis
    • Garcia-Vallve,S., Palau,J. and Romeu,A. (1999) Horizontal gene transfer in glycosyl hydrolases inferred from codon usage in Escherichia coli and Bacillus subtilis. Mol. Biol. Evol., 16, 1125-1134.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1125-1134
    • Garcia-Vallve, S.1    Palau, J.2    Romeu, A.3
  • 9
    • 0033995545 scopus 로고    scopus 로고
    • Horizontal gene transfer of glycosyl hydrolases of the rumen fungi
    • Garcia-Vallve,S., Romeu,A. and Palau,J. (2000) Horizontal gene transfer of glycosyl hydrolases of the rumen fungi. Mol. Biol. Evol., 17, 352-361.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 352-361
    • Garcia-Vallve, S.1    Romeu, A.2    Palau, J.3
  • 10
    • 0036892058 scopus 로고    scopus 로고
    • Simultaneous horizontal gene transfer of a gene coding for ribosomal protein L27 and operational genes in Arthrobacter sp
    • in press
    • Garcia-Vallve,S., Simó,F.X., Montero,M.A., Arola,L. and Romeu,A. (2002) Simultaneous horizontal gene transfer of a gene coding for ribosomal protein L27 and operational genes in Arthrobacter sp. J. Mol. Evol., in press.
    • (2002) J. Mol. Evol.
    • Garcia-Vallve, S.1    Simó, F.X.2    Montero, M.A.3    Arola, L.4    Romeu, A.5
  • 12
    • 0036791987 scopus 로고    scopus 로고
    • Genetic variation between Helicobacter pylori strains: Gene acquisition or loss?
    • Garcia-Vallve,S., Janssen,P.J. and Ouzounis,C.A. (2002) Genetic variation between Helicobacter pylori strains: gene acquisition or loss? Trends Microbiol., 10, 445-447.
    • (2002) Trends Microbiol. , vol.10 , pp. 445-447
    • Garcia-Vallve, S.1    Janssen, P.J.2    Ouzounis, C.A.3
  • 13
    • 0037133671 scopus 로고    scopus 로고
    • Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis
    • Akashi,H. and Gojobori,T. (2002) Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis. Proc. Natl Acad. Sci. USA, 99, 3695-3700.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 3695-3700
    • Akashi, H.1    Gojobori, T.2
  • 15
    • 0025318864 scopus 로고
    • The effective number of codons used in a gene
    • Wright,F. (1990) The effective number of codons used in a gene. Gene, 87, 23-29.
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 17
    • 0020491327 scopus 로고
    • Codon usage in bacteria-correlation with gene expressivity
    • Gouy,M. and Gautier,C. (1982) Codon usage in bacteria-correlation with gene expressivity. Nucleic Acids Res., 10, 7055-7074.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 7055-7074
    • Gouy, M.1    Gautier, C.2
  • 18
    • 0023652058 scopus 로고
    • Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases
    • Shields,D.C. and Sharp,P.M. (1987) Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases. Nucleic Acids Res., 15, 8023-8040.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 8023-8040
    • Shields, D.C.1    Sharp, P.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.