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Volumn 31, Issue 7, 2009, Pages 727-735

Conserved noncoding elements and the evolution of animal body plans

Author keywords

Comparative genomics; Conserved noncoding elements; Evolution

Indexed keywords

SONIC HEDGEHOG PROTEIN; TRANSCRIPTION FACTOR SOX9; SPACER DNA;

EID: 70349336077     PISSN: 02659247     EISSN: None     Source Type: Journal    
DOI: 10.1002/bies.200900014     Document Type: Article
Times cited : (27)

References (69)
  • 1
    • 0028065238 scopus 로고
    • A conserved retinoic acid response element required for early expression of the homeobox gene Hoxb-1
    • Marshall, H., Studer, M., Popperl, H., Aparicio, S., Kuroiwa, A., et al. A conserved retinoic acid response element required for early expression of the homeobox gene Hoxb-1. Nature 1994. 370: 567-571.
    • (1994) Nature , vol.370 , pp. 567-571
    • Marshall, H.1    Studer, M.2    Popperl, H.3    Aparicio, S.4    Kuroiwa, A.5
  • 2
    • 0031858210 scopus 로고    scopus 로고
    • Identification of an evolutionarily conserved 110 base-pair cis-acting regulatory sequence that governs Wnt-1 expression in the murine neural plate
    • Rowitch, D. H., Echelard, Y., Danielian, P. S., Gellner, K., Brenner, S. and McMahon, A. P., Identification of an evolutionarily conserved 110 base-pair cis-acting regulatory sequence that governs Wnt-1 expression in the murine neural plate. Development 1998. 125: 2735-2746.
    • (1998) Development , vol.125 , pp. 2735-2746
    • Rowitch, D.H.1    Echelard, Y.2    Danielian, P.S.3    Gellner, K.4    Brenner, S.5    McMahon, A.P.6
  • 3
    • 0032895297 scopus 로고    scopus 로고
    • Distinct cis-essential modules direct the time-space pattern of the Pax6 gene activity
    • Kammandel, B., Chowdhury, K., Stoykova, A., Aparicio, S., Brenner, S. and Gruss, P., Distinct cis-essential modules direct the time-space pattern of the Pax6 gene activity. Dev Biol 1999. 205: 79-97.
    • (1999) Dev Biol , vol.205 , pp. 79-97
    • Kammandel, B.1    Chowdhury, K.2    Stoykova, A.3    Aparicio, S.4    Brenner, S.5    Gruss, P.6
  • 5
    • 0034756824 scopus 로고    scopus 로고
    • Comparative genomics of the SOX9 region in human and Fugu rubripes: Conservation of short regulatory sequence elements within large intergenic regions
    • Bagheri-Fam, S., Ferraz, C., Demaille, J., Scherer, G. and Pfeifer, D., Comparative genomics of the SOX9 region in human and Fugu rubripes: conservation of short regulatory sequence elements within large intergenic regions. Genomics 2001. 78: 73-82.
    • (2001) Genomics , vol.78 , pp. 73-82
    • Bagheri-Fam, S.1    Ferraz, C.2    Demaille, J.3    Scherer, G.4    Pfeifer, D.5
  • 6
    • 0037397910 scopus 로고    scopus 로고
    • Regulatory roles of conserved intergenic domains in vertebrate Dlx bigene clusters
    • Ghanem, N., Jarinova, O., Amores, A., Long, Q., Hatch, G., et al. Regulatory roles of conserved intergenic domains in vertebrate Dlx bigene clusters. Genome Res 2003. 13: 533-543.
    • (2003) Genome Res , vol.13 , pp. 533-543
    • Ghanem, N.1    Jarinova, O.2    Amores, A.3    Long, Q.4    Hatch, G.5
  • 7
    • 0042810698 scopus 로고    scopus 로고
    • A longrange Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly
    • Lettice, L. A., Heaney, S. J., Purdie, L. A., Li, L., de Beer, P., et al. A longrange Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly. Hum Mol Genet 2003. 12: 1725-1735.
    • (2003) Hum Mol Genet , vol.12 , pp. 1725-1735
    • Lettice, L.A.1    Heaney, S.J.2    Purdie, L.A.3    Li, L.4    de Beer, P.5
  • 8
    • 0142084743 scopus 로고    scopus 로고
    • Scanning human gene deserts for long-range enhancers
    • Nobrega, M. A., Ovcharenko, I., Afzal, V. and Rubin, E. M., Scanning human gene deserts for long-range enhancers. Science 2003. 302: 413.
    • (2003) Science , vol.302 , pp. 413
    • Nobrega, M.A.1    Ovcharenko, I.2    Afzal, V.3    Rubin, E.M.4
  • 9
    • 0242662461 scopus 로고    scopus 로고
    • Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs)
    • Dermitzakis, E. T., Reymond, A., Scamuffa, N., Ucla, C., Kirkness, E., et al. Evolutionary discrimination of mammalian conserved non-genic sequences (CNGs). Science 2003. 302: 1033-1035.
    • (2003) Science , vol.302 , pp. 1033-1035
    • Dermitzakis, E.T.1    Reymond, A.2    Scamuffa, N.3    Ucla, C.4    Kirkness, E.5
  • 10
    • 22144473057 scopus 로고    scopus 로고
    • Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes
    • Sandelin, A., Bailey, P., Bruce, S., Engstrom, P. G., Klos, J. M., et al. Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes. BMC Genomics 2004. 5: 99.
    • (2004) BMC Genomics , vol.5 , pp. 99
    • Sandelin, A.1    Bailey, P.2    Bruce, S.3    Engstrom, P.G.4    Klos, J.M.5
  • 11
    • 20044366725 scopus 로고    scopus 로고
    • Highly conserved non-coding sequences are associated with vertebrate development
    • Woolfe, A., Goodson, M., Goode, D. K., Snell, P., McEwen, G. K., et al. Highly conserved non-coding sequences are associated with vertebrate development. PLoS Biol 2005. 3: e7.
    • (2005) PLoS Biol , vol.3
    • Woolfe, A.1    Goodson, M.2    Goode, D.K.3    Snell, P.4    McEwen, G.K.5
  • 13
    • 34447500684 scopus 로고    scopus 로고
    • Parallel evolution of conserved non-coding elements that target a common set of developmental regulatory genes from worms to humans
    • Vavouri, T., Walter, K., Gilks, W. R., Lehner, B. and Elgar, G., Parallel evolution of conserved non-coding elements that target a common set of developmental regulatory genes from worms to humans. Genome Biol 2007. 8: R15.
    • (2007) Genome Biol , vol.8
    • Vavouri, T.1    Walter, K.2    Gilks, W.R.3    Lehner, B.4    Elgar, G.5
  • 14
    • 23744502709 scopus 로고    scopus 로고
    • A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts
    • de la Calle-Mustienes, E., Feijoo, C. G., Manzanares, M., Tena, J. J., Rodriguez-Seguel, E., et al. A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts. Genome Res 2005. 15: 1061-1072.
    • (2005) Genome Res , vol.15 , pp. 1061-1072
    • de la Calle-Mustienes, E.1    Feijoo, C.G.2    Manzanares, M.3    Tena, J.J.4    Rodriguez-Seguel, E.5
  • 15
    • 33645519275 scopus 로고    scopus 로고
    • Ancient duplicated conserved noncoding elements in vertebrates: A genomic and functional analysis
    • McEwen, G. K., Woolfe, A., Goode, D., Vavouri, T., Callaway, H. and Elgar, G., Ancient duplicated conserved noncoding elements in vertebrates: a genomic and functional analysis. Genome Res 2006. 16: 451-465.
    • (2006) Genome Res , vol.16 , pp. 451-465
    • McEwen, G.K.1    Woolfe, A.2    Goode, D.3    Vavouri, T.4    Callaway, H.5    Elgar, G.6
  • 16
    • 33751316959 scopus 로고    scopus 로고
    • In vivo enhancer analysis of human conserved non-coding sequences
    • Pennacchio, L. A., Ahituv, N., Moses, A. M., Prabhakar, S., Nobrega, M. A., et al. In vivo enhancer analysis of human conserved non-coding sequences. Nature 2006. 444: 499-502.
    • (2006) Nature , vol.444 , pp. 499-502
    • Pennacchio, L.A.1    Ahituv, N.2    Moses, A.M.3    Prabhakar, S.4    Nobrega, M.A.5
  • 17
    • 60149091656 scopus 로고    scopus 로고
    • ChIP-seq accurately predicts tissue-specific activity of enhancers
    • Visel, A., Blow, M. J., Li, Z., Zhang, T., Akiyama, J. A., et al. ChIP-seq accurately predicts tissue-specific activity of enhancers. Nature 2009. 457: 854-858.
    • (2009) Nature , vol.457 , pp. 854-858
    • Visel, A.1    Blow, M.J.2    Li, Z.3    Zhang, T.4    Akiyama, J.A.5
  • 18
    • 45449096267 scopus 로고    scopus 로고
    • Tuning in to the signals: Noncoding sequence conservation in vertebrate genomes
    • Elgar, G. and Vavouri, T., Tuning in to the signals: noncoding sequence conservation in vertebrate genomes. Trends Genet 2008. 24: 344-352.
    • (2008) Trends Genet , vol.24 , pp. 344-352
    • Elgar, G.1    Vavouri, T.2
  • 19
    • 31744448843 scopus 로고    scopus 로고
    • Conserved noncoding sequences are selectively constrained and not mutation cold spots
    • Drake, J. A., Bird, C., Nemesh, J., Thomas, D. J., Newton-Cheh, C., et al. Conserved noncoding sequences are selectively constrained and not mutation cold spots. Nat Genet 2006. 38: 223-227.
    • (2006) Nat Genet , vol.38 , pp. 223-227
    • Drake, J.A.1    Bird, C.2    Nemesh, J.3    Thomas, D.J.4    Newton-Cheh, C.5
  • 20
    • 34548131708 scopus 로고    scopus 로고
    • Human genome ultraconserved elements are ultraselected
    • Katzman, S., Kern, A. D., Bejerano, G., Fewell, G., Fulton, L., et al. Human genome ultraconserved elements are ultraselected. Science 2007. 317: 915.
    • (2007) Science , vol.317 , pp. 915
    • Katzman, S.1    Kern, A.D.2    Bejerano, G.3    Fewell, G.4    Fulton, L.5
  • 21
    • 55549128249 scopus 로고    scopus 로고
    • Dispensability of mammalian DNA
    • McLean, C. and Bejerano, G., Dispensability of mammalian DNA. Genome Res 2008. 18: 1743-1751.
    • (2008) Genome Res , vol.18 , pp. 1743-1751
    • McLean, C.1    Bejerano, G.2
  • 22
    • 23744458086 scopus 로고    scopus 로고
    • Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
    • Siepel, A., Bejerano, G., Pedersen, J. S., Hinrichs, A. S., Hou, M., et al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Res 2005. 15: 1034-1050.
    • (2005) Genome Res , vol.15 , pp. 1034-1050
    • Siepel, A.1    Bejerano, G.2    Pedersen, J.S.3    Hinrichs, A.S.4    Hou, M.5
  • 23
    • 29444452159 scopus 로고    scopus 로고
    • Defining a genomic radius for long-range enhancer action: Duplicated conserved non-coding elements hold the key
    • Vavouri, T., McEwen, G. K., Woolfe, A., Gilks, W. R. and Elgar, G., Defining a genomic radius for long-range enhancer action: duplicated conserved non-coding elements hold the key. Trends Genet 2006. 22: 5-10.
    • (2006) Trends Genet , vol.22 , pp. 5-10
    • Vavouri, T.1    McEwen, G.K.2    Woolfe, A.3    Gilks, W.R.4    Elgar, G.5
  • 24
    • 21444434589 scopus 로고    scopus 로고
    • Highly conserved regulatory elements around the SHH gene may contribute to the maintenance of conserved synteny across human chromosome 7q36.3
    • Goode, D. K., Snell, P., Smith, S. F., Cooke, J. E. and Elgar, G., Highly conserved regulatory elements around the SHH gene may contribute to the maintenance of conserved synteny across human chromosome 7q36.3. Genomics 2005. 86: 172-181.
    • (2005) Genomics , vol.86 , pp. 172-181
    • Goode, D.K.1    Snell, P.2    Smith, S.F.3    Cooke, J.E.4    Elgar, G.5
  • 26
    • 34248153777 scopus 로고    scopus 로고
    • Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates
    • Kikuta, H., Laplante, M., Navratilova, P., Komisarczuk, A. Z., Engstrom, P. G., et al. Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates. Genome Res 2007. 17: 545-555.
    • (2007) Genome Res , vol.17 , pp. 545-555
    • Kikuta, H.1    Laplante, M.2    Navratilova, P.3    Komisarczuk, A.Z.4    Engstrom, P.G.5
  • 27
    • 0038613098 scopus 로고    scopus 로고
    • A global control region defines a chromosomal regulatory landscape containing the HoxD cluster
    • Spitz, F., Gonzalez, F. and Duboule, D., A global control region defines a chromosomal regulatory landscape containing the HoxD cluster. Cell 2003. 113: 405-417.
    • (2003) Cell , vol.113 , pp. 405-417
    • Spitz, F.1    Gonzalez, F.2    Duboule, D.3
  • 28
    • 70349791271 scopus 로고    scopus 로고
    • Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes
    • Navratilova, P., Fredman, D., Hawkins, T. A., Turner, K., Lenhard, B. and Becker, T. S., Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes. Dev Biol 2008.
    • (2008) Dev Biol
    • Navratilova, P.1    Fredman, D.2    Hawkins, T.A.3    Turner, K.4    Lenhard, B.5    Becker, T.S.6
  • 29
    • 61349104285 scopus 로고    scopus 로고
    • Highly conserved non-coding elements on either side of SOX9 associated with Pierre Robin sequence
    • Benko, S., Fantes, J. A., Amiel, J., Kleinjan, D. J., Thomas, S., et al. Highly conserved non-coding elements on either side of SOX9 associated with Pierre Robin sequence. Nat Genet 2009. 41: 359-364.
    • (2009) Nat Genet , vol.41 , pp. 359-364
    • Benko, S.1    Fantes, J.A.2    Amiel, J.3    Kleinjan, D.J.4    Thomas, S.5
  • 30
    • 34248524473 scopus 로고    scopus 로고
    • Mapping networks of physical interactions between genomic elements using 5C technology
    • Dostie, J. and Dekker, J., Mapping networks of physical interactions between genomic elements using 5C technology. Nat Protoc 2007. 2: 988-1002.
    • (2007) Nat Protoc , vol.2 , pp. 988-1002
    • Dostie, J.1    Dekker, J.2
  • 31
    • 39449139894 scopus 로고    scopus 로고
    • High-resolution circular chromosome conformation capture assay
    • Gondor, A., Rougier, C. and Ohlsson, R., High-resolution circular chromosome conformation capture assay. Nat Protoc 2008. 3: 303-313.
    • (2008) Nat Protoc , vol.3 , pp. 303-313
    • Gondor, A.1    Rougier, C.2    Ohlsson, R.3
  • 32
    • 33846876333 scopus 로고    scopus 로고
    • Predicting tissue-specific enhancers in the human genome
    • Pennacchio, L. A., Loots, G. G., Nobrega, M. A. and Ovcharenko, I., Predicting tissue-specific enhancers in the human genome. Genome Res 2007. 17: 201-211.
    • (2007) Genome Res , vol.17 , pp. 201-211
    • Pennacchio, L.A.1    Loots, G.G.2    Nobrega, M.A.3    Ovcharenko, I.4
  • 33
    • 33646928347 scopus 로고    scopus 로고
    • A distal enhancer and an ultraconserved exon are derived from a novel retroposon
    • Bejerano, G., Lowe, C. B., Ahituv, N., King, B., Siepel, A., et al. A distal enhancer and an ultraconserved exon are derived from a novel retroposon. Nature 2006. 441: 87-90.
    • (2006) Nature , vol.441 , pp. 87-90
    • Bejerano, G.1    Lowe, C.B.2    Ahituv, N.3    King, B.4    Siepel, A.5
  • 34
    • 57149117132 scopus 로고    scopus 로고
    • Multigenome DNA sequence conservation identifies Hox cis-regulatory elements
    • Kuntz, S. G., Schwarz, E. M., Demodena, J. A., De Buysscher, T., Trout, D., et al. Multigenome DNA sequence conservation identifies Hox cis-regulatory elements. Genome Res 2008. 18: 1955-1968.
    • (2008) Genome Res , vol.18 , pp. 1955-1968
    • Kuntz, S.G.1    Schwarz, E.M.2    Demodena, J.A.3    De Buysscher, T.4    Trout, D.5
  • 35
    • 46449117597 scopus 로고    scopus 로고
    • The amphioxus genome illuminates vertebrate origins and cephalochordate biology
    • Holland, L. Z., Albalat, R., Azumi, K., Benito-Gutierrez, E., Blow, M. J., et al. The amphioxus genome illuminates vertebrate origins and cephalochordate biology. Genome Res 2008. 18: 1100-1111.
    • (2008) Genome Res , vol.18 , pp. 1100-1111
    • Holland, L.Z.1    Albalat, R.2    Azumi, K.3    Benito-Gutierrez, E.4    Blow, M.J.5
  • 36
    • 4243088097 scopus 로고    scopus 로고
    • The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
    • Stein, L. D., Bao, Z., Blasiar, D., Blumenthal, T., Brent, M. R., et al. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. PLoS Biol 2003. 1: E45.
    • (2003) PLoS Biol , vol.1
    • Stein, L.D.1    Bao, Z.2    Blasiar, D.3    Blumenthal, T.4    Brent, M.R.5
  • 37
    • 22344454794 scopus 로고    scopus 로고
    • Ultraconserved elements in insect genomes: A highly conserved intronic sequence implicated in the control of homothorax mRNA splicing
    • Glazov, E. A., Pheasant, M., McGraw, E. A., Bejerano, G. and Mattick, J. S., Ultraconserved elements in insect genomes: a highly conserved intronic sequence implicated in the control of homothorax mRNA splicing. Genome Res 2005. 15: 800-808.
    • (2005) Genome Res , vol.15 , pp. 800-808
    • Glazov, E.A.1    Pheasant, M.2    McGraw, E.A.3    Bejerano, G.4    Mattick, J.S.5
  • 38
    • 34347376733 scopus 로고    scopus 로고
    • Diploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyi
    • Kim, J. H., Waterman, M. S. and Li, L. M., Diploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyi. Genome Res 2007. 17: 1101-1110.
    • (2007) Genome Res , vol.17 , pp. 1101-1110
    • Kim, J.H.1    Waterman, M.S.2    Li, L.M.3
  • 39
    • 35348873167 scopus 로고    scopus 로고
    • Purifying selection maintains highly conserved noncoding sequences in Drosophila
    • Casillas, S., Barbadilla, A. and Bergman, C. M., Purifying selection maintains highly conserved noncoding sequences in Drosophila. Mol Biol Evol 2007. 24: 2222-2234.
    • (2007) Mol Biol Evol , vol.24 , pp. 2222-2234
    • Casillas, S.1    Barbadilla, A.2    Bergman, C.M.3
  • 40
    • 22144494134 scopus 로고    scopus 로고
    • Striking nucleotide frequency pattern at the borders of highly conserved vertebrate noncoding sequences
    • Walter, K., Abnizova, I., Elgar, G. and Gilks, W. R., Striking nucleotide frequency pattern at the borders of highly conserved vertebrate noncoding sequences. Trends Genet 2005. 21: 436-440.
    • (2005) Trends Genet , vol.21 , pp. 436-440
    • Walter, K.1    Abnizova, I.2    Elgar, G.3    Gilks, W.R.4
  • 41
    • 0037448540 scopus 로고    scopus 로고
    • Systematic functional analysis of the Caenorhabditis elegans genome using RNAi
    • Kamath, R. S., Fraser, A. G., Dong, Y., Poulin, G., Durbin, R., et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 2003. 421: 231-237.
    • (2003) Nature , vol.421 , pp. 231-237
    • Kamath, R.S.1    Fraser, A.G.2    Dong, Y.3    Poulin, G.4    Durbin, R.5
  • 42
    • 38849112675 scopus 로고    scopus 로고
    • Genomic regulatory blocks underlie extensive microsynteny conservation in insects
    • Engstrom, P. G., Ho Sui, S. J., Drivenes, O., Becker, T. S. and Lenhard, B., Genomic regulatory blocks underlie extensive microsynteny conservation in insects. Genome Res 2007. 17: 1898-1908.
    • (2007) Genome Res , vol.17 , pp. 1898-1908
    • Engstrom, P.G.1    Ho Sui, S.J.2    Drivenes, O.3    Becker, T.S.4    Lenhard, B.5
  • 43
    • 62249204977 scopus 로고    scopus 로고
    • Big genomes facilitate the comparative identification of regulatory elements
    • Peterson, B. K., Hare, E. E., Iyer, V. N., Storage, S., Conner, L., et al. Big genomes facilitate the comparative identification of regulatory elements. PLoS One 2009. 4: e4688.
    • (2009) PLoS One , vol.4
    • Peterson, B.K.1    Hare, E.E.2    Iyer, V.N.3    Storage, S.4    Conner, L.5
  • 44
    • 33747749115 scopus 로고    scopus 로고
    • Darwin's dilemma: The realities of the Cambrian 'explosion'
    • Conway Morris, S., Darwin's dilemma: the realities of the Cambrian 'explosion'. Philos Trans R Soc Lond B Biol Sci 2006. 361: 1069-1083.
    • (2006) Philos Trans R Soc Lond B Biol Sci , vol.361 , pp. 1069-1083
    • Conway Morris, S.1
  • 45
    • 0033067476 scopus 로고    scopus 로고
    • Fossils, molecules and embryos: New perspectives on the Cambrian explosion
    • Valentine, J. W., Jablonski, D. and Erwin, D. H., Fossils, molecules and embryos: new perspectives on the Cambrian explosion. Development 1999. 126: 851-859.
    • (1999) Development , vol.126 , pp. 851-859
    • Valentine, J.W.1    Jablonski, D.2    Erwin, D.H.3
  • 46
    • 0036342146 scopus 로고    scopus 로고
    • The last common bilaterian ancestor
    • Erwin, D. H. and Davidson, E. H., The last common bilaterian ancestor. Development 2002. 129: 3021-3032.
    • (2002) Development , vol.129 , pp. 3021-3032
    • Erwin, D.H.1    Davidson, E.H.2
  • 47
    • 1642512352 scopus 로고    scopus 로고
    • The Cambrian "explosion" of metazoans and molecular biology: Would Darwin be satisfied?
    • Conway-Morris, S., The Cambrian "explosion" of metazoans and molecular biology: would Darwin be satisfied? Int J Dev Biol 2003. 47: 505-515.
    • (2003) Int J Dev Biol , vol.47 , pp. 505-515
    • Conway-Morris, S.1
  • 48
    • 0024898221 scopus 로고
    • Burgess Shale faunas and the Cambrian explosion
    • Morris, S., Burgess Shale faunas and the Cambrian explosion. Science 1989. 246: 339-346.
    • (1989) Science , vol.246 , pp. 339-346
    • Morris, S.1
  • 49
    • 0028307053 scopus 로고
    • Late Precambrian bilaterians: Grades and clades
    • Valentine, J. W., Late Precambrian bilaterians: grades and clades. Proc Natl Acad Sci U S A 1994. 91: 6751-6757.
    • (1994) Proc Natl Acad Sci U S A , vol.91 , pp. 6751-6757
    • Valentine, J.W.1
  • 50
    • 4344580767 scopus 로고
    • A lopsided look at evolution: An analysis of the fossil record reveals some unexpected patterns in the origin of major evolutionary innovations, patterns that presumably reflect the operation of different mechanisms
    • Lewin, R., A lopsided look at evolution: an analysis of the fossil record reveals some unexpected patterns in the origin of major evolutionary innovations, patterns that presumably reflect the operation of different mechanisms. Science 1988. 241: 291-293.
    • (1988) Science , vol.241 , pp. 291-293
    • Lewin, R.1
  • 51
    • 33744955037 scopus 로고    scopus 로고
    • Explaining the Cambrian "Explosion" of animals
    • Marshall, C., Explaining the Cambrian "Explosion" of animals. Annu Rev Earth Planet Sci 2006. 34: 355.
    • (2006) Annu Rev Earth Planet Sci , vol.34 , pp. 355
    • Marshall, C.1
  • 52
    • 20344385898 scopus 로고    scopus 로고
    • Origins and early evolution of predation
    • Bengtson, S., Origins and early evolution of predation. Paleontol Soc Pap 2002. 8: 289-318.
    • (2002) Paleontol Soc Pap , vol.8 , pp. 289-318
    • Bengtson, S.1
  • 53
    • 0001579865 scopus 로고
    • Canalization of development and genetic assimilation of acquired characters
    • Waddington, C. H., Canalization of development and genetic assimilation of acquired characters. Nature 1959. 183: 1654-1655.
    • (1959) Nature , vol.183 , pp. 1654-1655
    • Waddington, C.H.1
  • 54
    • 70349825277 scopus 로고    scopus 로고
    • Wimsatt, W., Developmental constraints, generative entrenchment, and the innate-acquired distinction. In: Bechtel, W. editor. Integrating scientific disciplines. Dordrecht, Martinus-Nijhoff [WCW], 1986.
    • Wimsatt, W., Developmental constraints, generative entrenchment, and the innate-acquired distinction. In: Bechtel, W. editor. Integrating scientific disciplines. Dordrecht, Martinus-Nijhoff [WCW], 1986.
  • 55
    • 0000907353 scopus 로고
    • The roles of mutation, inbreeding, crossbreeding, selection in evolution
    • Wright, S., The roles of mutation, inbreeding, crossbreeding, selection in evolution. Proc 6th Int Cong Genet 1932. 1: 356-366.
    • (1932) Proc 6th Int Cong Genet , vol.1 , pp. 356-366
    • Wright, S.1
  • 56
    • 0023647382 scopus 로고
    • Towards a general theory of adaptive walks on rugged landscapes
    • Kauffman, S. and Levin, S., Towards a general theory of adaptive walks on rugged landscapes. J Theor Biol 1987. 128: 11-45.
    • (1987) J Theor Biol , vol.128 , pp. 11-45
    • Kauffman, S.1    Levin, S.2
  • 57
    • 0024882755 scopus 로고
    • Cambrian explosion and Permian quiescence: Implications of rugged fitness landscapes
    • Kauffman, S., Cambrian explosion and Permian quiescence: implications of rugged fitness landscapes. Evol Ecol 1989. 3: 274-281.
    • (1989) Evol Ecol , vol.3 , pp. 274-281
    • Kauffman, S.1
  • 58
    • 44649163941 scopus 로고    scopus 로고
    • Genesis and expansion of metazoan transcription factor gene classes
    • Larroux, C., Luke, G. N., Koopman, P., Rokhsar, D. S., Shimeld, S. M. et al. Genesis and expansion of metazoan transcription factor gene classes. Mol Biol Evol 2008. 25: 980-996.
    • (2008) Mol Biol Evol , vol.25 , pp. 980-996
    • Larroux, C.1    Luke, G.N.2    Koopman, P.3    Rokhsar, D.S.4    Shimeld, S.M.5
  • 60
    • 1642553332 scopus 로고    scopus 로고
    • Adaptive walks in a gene network model of morphogenesis: Insights into the Cambrian explosion
    • Sole, R. V., Fernandez, P. and Kauffman, S. A., Adaptive walks in a gene network model of morphogenesis: insights into the Cambrian explosion. Int J Dev Biol 2003. 47: 685-693.
    • (2003) Int J Dev Biol , vol.47 , pp. 685-693
    • Sole, R.V.1    Fernandez, P.2    Kauffman, S.A.3
  • 61
    • 32444446240 scopus 로고    scopus 로고
    • Gene regulatory networks and the evolution of animal body plans
    • Davidson, E. H. and Erwin, D. H., Gene regulatory networks and the evolution of animal body plans. Science 2006. 311: 796-800.
    • (2006) Science , vol.311 , pp. 796-800
    • Davidson, E.H.1    Erwin, D.H.2
  • 62
    • 58549119985 scopus 로고    scopus 로고
    • The evolution of hierarchical gene regulatory networks
    • Erwin, D. H. and Davidson, E. H., The evolution of hierarchical gene regulatory networks. Nat Rev Genet 2009. 10: 141-148.
    • (2009) Nat Rev Genet , vol.10 , pp. 141-148
    • Erwin, D.H.1    Davidson, E.H.2
  • 63
    • 0032893932 scopus 로고    scopus 로고
    • Preservation of duplicate genes by complementary, degenerative mutations
    • Force, A., Lynch, M., Pickett, F. B., Amores, A., Yan, Y. L. and Postlethwait, J., Preservation of duplicate genes by complementary, degenerative mutations. Genetics 1999. 151: 1531-1545.
    • (1999) Genetics , vol.151 , pp. 1531-1545
    • Force, A.1    Lynch, M.2    Pickett, F.B.3    Amores, A.4    Yan, Y.L.5    Postlethwait, J.6
  • 64
    • 11144339384 scopus 로고    scopus 로고
    • Long-range control of gene expression: Emerging mechanisms and disruption in disease
    • Kleinjan, D. A. and van Heyningen, V., Long-range control of gene expression: emerging mechanisms and disruption in disease. Am J Hum Genet 2005. 76: 8-32.
    • (2005) Am J Hum Genet , vol.76 , pp. 8-32
    • Kleinjan, D.A.1    van Heyningen, V.2
  • 65
    • 0346040475 scopus 로고    scopus 로고
    • Phylogenetic conservation of a limb-specific, cis-acting regulator of Sonic hedgehog (Shh)
    • Sagai, T., Masuya, H., Tamura, M., Shimizu, K., Yada, Y., et al. Phylogenetic conservation of a limb-specific, cis-acting regulator of Sonic hedgehog (Shh). Mamm Genome 2004. 15: 23-34.
    • (2004) Mamm Genome , vol.15 , pp. 23-34
    • Sagai, T.1    Masuya, H.2    Tamura, M.3    Shimizu, K.4    Yada, Y.5
  • 66
    • 0017771466 scopus 로고
    • Evolution and tinkering
    • Jacob, F., Evolution and tinkering. Science 1977. 196: 1161-1166.
    • (1977) Science , vol.196 , pp. 1161-1166
    • Jacob, F.1
  • 67
    • 33646181360 scopus 로고    scopus 로고
    • The vertebrate spalt genes in development and disease
    • Sweetman, D. and Munsterberg, A., The vertebrate spalt genes in development and disease. Dev Biol 2006. 293: 285-293.
    • (2006) Dev Biol , vol.293 , pp. 285-293
    • Sweetman, D.1    Munsterberg, A.2
  • 68
    • 0037398368 scopus 로고    scopus 로고
    • LAGAN and Multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA
    • Brudno, M., Do, C. B., Cooper, G. M., Kim, M. F., Davydov, E., et al. LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA. Genome Res 2003. 13: 721-731.
    • (2003) Genome Res , vol.13 , pp. 721-731
    • Brudno, M.1    Do, C.B.2    Cooper, G.M.3    Kim, M.F.4    Davydov, E.5
  • 69
    • 0034518158 scopus 로고    scopus 로고
    • VISTA: Visualizing global DNA sequence alignments of arbitrary length
    • Mayor, C., Brudno, M., Schwartz, J. R., Poliakov, A., Rubin, E. M., et al. VISTA: visualizing global DNA sequence alignments of arbitrary length. Bioinformatics 2000. 16: 1046-1047.
    • (2000) Bioinformatics , vol.16 , pp. 1046-1047
    • Mayor, C.1    Brudno, M.2    Schwartz, J.R.3    Poliakov, A.4    Rubin, E.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.