-
1
-
-
0034708480
-
The genome sequence of Drosophila melanogaster
-
Adams, M.D., Celniker, S.E., Holt, R.A., Evans, C.A., Gocayne, J.D., Amanatides, P.G., Scherer, S.E., Li, P.W., Hoskins, R.A., Galle, R.F., et al. 2000. The genome sequence of Drosophila melanogaster. Science 287: 2185-2195.
-
(2000)
Science
, vol.287
, pp. 2185-2195
-
-
Adams, M.D.1
Celniker, S.E.2
Holt, R.A.3
Evans, C.A.4
Gocayne, J.D.5
Amanatides, P.G.6
Scherer, S.E.7
Li, P.W.8
Hoskins, R.A.9
Galle, R.F.10
-
2
-
-
0037162885
-
Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes
-
Aparicio, S., Chapman, J., Stupka, E., Putnam, N., Chia, J.-m., Dehal, P., Christoffels, A., Rash, S., Hoon, S., Smit, A., et al. 2002. Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science 297: 1301-1310.
-
(2002)
Science
, vol.297
, pp. 1301-1310
-
-
Aparicio, S.1
Chapman, J.2
Stupka, E.3
Putnam, N.4
Chia, J.-M.5
Dehal, P.6
Christoffels, A.7
Rash, S.8
Hoon, S.9
Smit, A.10
-
3
-
-
7444258603
-
Ciliary photoreceptors with a vertebrate-type opsin in an invertebrate brain
-
Arendt, D., Tessmar-Raible, K., Snyman, H., Dorresteijn, A.W., and Wittbrodt, J. 2004. Ciliary photoreceptors with a vertebrate-type opsin in an invertebrate brain. Science 306: 869-871.
-
(2004)
Science
, vol.306
, pp. 869-871
-
-
Arendt, D.1
Tessmar-Raible, K.2
Snyman, H.3
Dorresteijn, A.W.4
Wittbrodt, J.5
-
4
-
-
34547196874
-
Cis-regulation of the amphioxus engrailed gene: Insights into evolution of a muscle-specific enhancer
-
Beaster-Jones, L., Schubert, M., and Holland, L.Z. 2007. Cis-regulation of the amphioxus engrailed gene: Insights into evolution of a muscle-specific enhancer. Mech. Dev. 124: 532-542.
-
(2007)
Mech. Dev
, vol.124
, pp. 532-542
-
-
Beaster-Jones, L.1
Schubert, M.2
Holland, L.Z.3
-
5
-
-
33947727646
-
The interleukin-1 receptor family
-
Boraschi, D. and Tagliabue, A. 2006. The interleukin-1 receptor family. Vitam. Horm. 74: 229-254.
-
(2006)
Vitam. Horm
, vol.74
, pp. 229-254
-
-
Boraschi, D.1
Tagliabue, A.2
-
6
-
-
33750585486
-
Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida
-
Bourlat, S., Juliusdottir, T., Lowe, C.J., Freeman, R., Aronowicz, J., Kirschner, M., Lander, E.S., Thorndyke, M., Nakano, H., Kohn, A.B., et al. 2006. Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida. Nature 444: 85-88.
-
(2006)
Nature
, vol.444
, pp. 85-88
-
-
Bourlat, S.1
Juliusdottir, T.2
Lowe, C.J.3
Freeman, R.4
Aronowicz, J.5
Kirschner, M.6
Lander, E.S.7
Thorndyke, M.8
Nakano, H.9
Kohn, A.B.10
-
7
-
-
4944262040
-
Glocal alignment: Finding rearrangements during alignment
-
Brudno, M., Malde, S., Polikakov, A., and Do, C.B. 2003. Glocal alignment: Finding rearrangements during alignment. Bioinformatics 19: i54-i62.
-
(2003)
Bioinformatics
, vol.19
-
-
Brudno, M.1
Malde, S.2
Polikakov, A.3
Do, C.B.4
-
8
-
-
27844464641
-
Homeodomain proteins
-
Wiley-VCH, Verlag GmbH & Co, Weinheim, Germany
-
Bürglin, T.R. 2005. Homeodomain proteins. In: Encyclopedia of molecular cell biology and molecular medicine, pp. 179-222. Wiley-VCH, Verlag GmbH & Co., Weinheim, Germany.
-
(2005)
Encyclopedia of molecular cell biology and molecular medicine
, pp. 179-222
-
-
Bürglin, T.R.1
-
9
-
-
0032509302
-
-
C. elegans Sequencing Consortium. 1998. Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282: 2012-2018.
-
C. elegans Sequencing Consortium. 1998. Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282: 2012-2018.
-
-
-
-
10
-
-
3242655680
-
Piecing together evolution of the vertebrate endocrine system
-
Campbell, R.K., Satoh, N., and Degnan, B.M. 2004. Piecing together evolution of the vertebrate endocrine system. Trends Genet. 20: 359-366.
-
(2004)
Trends Genet
, vol.20
, pp. 359-366
-
-
Campbell, R.K.1
Satoh, N.2
Degnan, B.M.3
-
11
-
-
0034712915
-
Evolution of the chordate body plan: New insights from phylogenetic analysis of deuterostome phyla
-
Cameron, C.B., Garey, J.R., and Swalla, B.J. 2000. Evolution of the chordate body plan: New insights from phylogenetic analysis of deuterostome phyla. Proc. Natl. Acad. Sci. 97: 4469-4474.
-
(2000)
Proc. Natl. Acad. Sci
, vol.97
, pp. 4469-4474
-
-
Cameron, C.B.1
Garey, J.R.2
Swalla, B.J.3
-
12
-
-
0036915521
-
Identification of diversified genes that contain immunoglobulin-like variable regions in a protochordate
-
Cannon, J.P., Haire, R.N., and Litman, G.W. 2002. Identification of diversified genes that contain immunoglobulin-like variable regions in a protochordate. Nat. Immunol. 3: 1200-1207.
-
(2002)
Nat. Immunol
, vol.3
, pp. 1200-1207
-
-
Cannon, J.P.1
Haire, R.N.2
Litman, G.W.3
-
13
-
-
0036991862
-
Fluorescent in situ hybridisation to amphioxus chromosomes
-
Castro, L.F. and Holland, P.W. 2002. Fluorescent in situ hybridisation to amphioxus chromosomes. Zoolog. Sci. 19: 1349-1353.
-
(2002)
Zoolog. Sci
, vol.19
, pp. 1349-1353
-
-
Castro, L.F.1
Holland, P.W.2
-
14
-
-
0025634026
-
Evolution of the insulin superfamily: Cloning of a hybrid insulin/insulin-like growth factor cDNA from amphioxus
-
Chan, S.J., Cao, Q.P., and Steiner, D.F. 1990. Evolution of the insulin superfamily: Cloning of a hybrid insulin/insulin-like growth factor cDNA from amphioxus. Proc. Natl. Acad. Sci. 87: 9319-9323.
-
(1990)
Proc. Natl. Acad. Sci
, vol.87
, pp. 9319-9323
-
-
Chan, S.J.1
Cao, Q.P.2
Steiner, D.F.3
-
15
-
-
10744219655
-
Identification of a developmentally regulated striatum-enriched zinc-finger gene, Nolz-1, in the mammalian brain
-
Chang, C.W., Tsai, C.W., Wang, H.F., Tsai, H.C., Chen, H.Y., Tsai, T.F., Takahashi, H., Li, H.Y., Fann, M.J., Yang, C.W., et al. 2004. Identification of a developmentally regulated striatum-enriched zinc-finger gene, Nolz-1, in the mammalian brain. Proc. Natl. Acad. Sci. 101: 2613-2618.
-
(2004)
Proc. Natl. Acad. Sci
, vol.101
, pp. 2613-2618
-
-
Chang, C.W.1
Tsai, C.W.2
Wang, H.F.3
Tsai, H.C.4
Chen, H.Y.5
Tsai, T.F.6
Takahashi, H.7
Li, H.Y.8
Fann, M.J.9
Yang, C.W.10
-
16
-
-
0342658137
-
Expression of the T-box family genes, Tbx1-Tbx5, during early mouse development
-
Chapman, D.L., Garvey, N., Hancock, S., Alexiou, M., Agulnik, S.I., Gibson-Brown, J.J., Cebra-Thomas, J., Bollag, R.J., Silver, L.M., and Papaioannou, V.E. 1996. Expression of the T-box family genes, Tbx1-Tbx5, during early mouse development. Dev. Dyn. 206: 379-390.
-
(1996)
Dev. Dyn
, vol.206
, pp. 379-390
-
-
Chapman, D.L.1
Garvey, N.2
Hancock, S.3
Alexiou, M.4
Agulnik, S.I.5
Gibson-Brown, J.J.6
Cebra-Thomas, J.7
Bollag, R.J.8
Silver, L.M.9
Papaioannou, V.E.10
-
17
-
-
0029503662
-
A possible early Cambrian chordate
-
Chen, J.Y., Dzik, J., Edgecombe, G.D., Ramskold, L., and Zhou, G.Q. 1995. A possible early Cambrian chordate. Nature 377: 720-722.
-
(1995)
Nature
, vol.377
, pp. 720-722
-
-
Chen, J.Y.1
Dzik, J.2
Edgecombe, G.D.3
Ramskold, L.4
Zhou, G.Q.5
-
18
-
-
24344500211
-
Initial sequence of the chimpanzee genome and comparison with the human genome
-
The Chimpanzee Sequencing and Analysis Consortium
-
The Chimpanzee Sequencing and Analysis Consortium. 2005. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437: 69-87.
-
(2005)
Nature
, vol.437
, pp. 69-87
-
-
-
19
-
-
84924011325
-
Sur la formation d'hormones thyroidiennes et de leurs précurseurs par Branchiostoma lanceolatum.
-
Covelli, I., Salvatore, G., Sena, L., and Roche, J. 1960. Sur la formation d'hormones thyroidiennes et de leurs précurseurs par Branchiostoma lanceolatum. C. R. Soc. Biol. Paris 154: 1165-1169.
-
(1960)
C. R. Soc. Biol. Paris
, vol.154
, pp. 1165-1169
-
-
Covelli, I.1
Salvatore, G.2
Sena, L.3
Roche, J.4
-
20
-
-
26444603772
-
Two rounds of genome duplication in the ancestral vertebrate
-
doi: 10.1371/journal.pbio.0030314
-
Dehal, P. and Boore, J.L. 2005. Two rounds of genome duplication in the ancestral vertebrate. PLoS Biol. 3: e314. doi: 10.1371/journal.pbio.0030314.
-
(2005)
PLoS Biol
, vol.3
-
-
Dehal, P.1
Boore, J.L.2
-
21
-
-
2242464840
-
The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins
-
Dehal, P., Satou, Y., Campbell, R.K., Chapman, J., Degnan, B., De Tomaso, A., Davidson, B., Di Gregorio, A., Gelpke, M., Goodstein, D.M., et al. 2002. The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins. Science 298: 2157-2167.
-
(2002)
Science
, vol.298
, pp. 2157-2167
-
-
Dehal, P.1
Satou, Y.2
Campbell, R.K.3
Chapman, J.4
Degnan, B.5
De Tomaso, A.6
Davidson, B.7
Di Gregorio, A.8
Gelpke, M.9
Goodstein, D.M.10
-
22
-
-
33846136089
-
Innate recognition of intracellular bacteria
-
Delbridge, L.M. and O'Riordan, M.X. 2007. Innate recognition of intracellular bacteria. Curr. Opin. Immunol. 19: 10-16.
-
(2007)
Curr. Opin. Immunol
, vol.19
, pp. 10-16
-
-
Delbridge, L.M.1
O'Riordan, M.X.2
-
23
-
-
33644536713
-
Tunicates and not cephalochordates are the closest living relatives of vertebrates
-
Delsuc, F., Brinkmann, H., Chourrout, D., and Philippe, H. 2006. Tunicates and not cephalochordates are the closest living relatives of vertebrates. Nature 439: 965-968.
-
(2006)
Nature
, vol.439
, pp. 965-968
-
-
Delsuc, F.1
Brinkmann, H.2
Chourrout, D.3
Philippe, H.4
-
24
-
-
0036333369
-
The retinoic acid signaling pathway regulates anterior/posterior patterning in the nerve cord and pharynx of amphioxus, a chordate lacking neural crest
-
Escriva, H., Holland, N.D., Groenmeyer, H., Laudet, V., and Holland, L.Z. 2002. The retinoic acid signaling pathway regulates anterior/posterior patterning in the nerve cord and pharynx of amphioxus, a chordate lacking neural crest. Development 129: 2905-2916.
-
(2002)
Development
, vol.129
, pp. 2905-2916
-
-
Escriva, H.1
Holland, N.D.2
Groenmeyer, H.3
Laudet, V.4
Holland, L.Z.5
-
25
-
-
21344455586
-
Neuroendocrine regulation of structure and function in the endostyle of amphioxus, Branchiostoma belcheri
-
Fang, Y.Q. and Weng, Y.Z. 2002. Neuroendocrine regulation of structure and function in the endostyle of amphioxus, Branchiostoma belcheri. Prog. Nat. Sci. 12: 904-908.
-
(2002)
Prog. Nat. Sci
, vol.12
, pp. 904-908
-
-
Fang, Y.Q.1
Weng, Y.Z.2
-
26
-
-
0033827334
-
The amphioxus Hox cluster: Deuterostome posterior flexibility and Hox14
-
Ferrier, D.E.K., Minguillón, C., Holland, P.W.H., and Garcia-Fernàndez, J. 2000. The amphioxus Hox cluster: Deuterostome posterior flexibility and Hox14. Evol. Dev. 2: 284-293.
-
(2000)
Evol. Dev
, vol.2
, pp. 284-293
-
-
Ferrier, D.E.K.1
Minguillón, C.2
Holland, P.W.H.3
Garcia-Fernàndez, J.4
-
27
-
-
0035884333
-
Amphioxus EVX genes: Implications for the evolution of the midbrain-hindbrain boundary and the chordate tailbud
-
Ferrier, D.E.K., Minguillón, C., Cebriá, C., and Garcia-Fernàndez, J. 2001. Amphioxus EVX genes: Implications for the evolution of the midbrain-hindbrain boundary and the chordate tailbud. Dev. Biol. 237: 270-281.
-
(2001)
Dev. Biol
, vol.237
, pp. 270-281
-
-
Ferrier, D.E.K.1
Minguillón, C.2
Cebriá, C.3
Garcia-Fernàndez, J.4
-
28
-
-
3242891068
-
VISTA: Computational tools for comparative genomics
-
Frazer, K.A., Pachter, L., Poliakov, A., Rubin, E.M., and Dubchak, I. 2004. VISTA: Computational tools for comparative genomics. Nucleic Acids Res. 32: W273-W279.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Frazer, K.A.1
Pachter, L.2
Poliakov, A.3
Rubin, E.M.4
Dubchak, I.5
-
29
-
-
0021659508
-
Iodine binding in the endostyle of larval Branchiostoma lanceolatum (Cephalochordata)
-
Fredriksson, G., Ericson, L.E., and Olsson, R. 1984. Iodine binding in the endostyle of larval Branchiostoma lanceolatum (Cephalochordata). Gen. Comp. Endocrinol. 56: 177-184.
-
(1984)
Gen. Comp. Endocrinol
, vol.56
, pp. 177-184
-
-
Fredriksson, G.1
Ericson, L.E.2
Olsson, R.3
-
30
-
-
0037083562
-
Immunology. One AID to unite them all
-
Fugmann, S.D. and Schatz, D.G. 2002. Immunology. One AID to unite them all. Science 295: 1244-1245.
-
(2002)
Science
, vol.295
, pp. 1244-1245
-
-
Fugmann, S.D.1
Schatz, D.G.2
-
31
-
-
33644856255
-
An ancient evolutionary origin of the Rag1/2 gene locus
-
Fugmann, S.D., Messier, C., Novack, L.A., Cameron, R.A., and Rast, J.P. 2006. An ancient evolutionary origin of the Rag1/2 gene locus. Proc. Natl. Acad. Sci. 103: 3728-3733.
-
(2006)
Proc. Natl. Acad. Sci
, vol.103
, pp. 3728-3733
-
-
Fugmann, S.D.1
Messier, C.2
Novack, L.A.3
Cameron, R.A.4
Rast, J.P.5
-
32
-
-
0028065237
-
Archetypal organization of the amphioxus Hox gene cluster
-
Garcia-Fernàndez, J. and Holland, P.W.H. 1994. Archetypal organization of the amphioxus Hox gene cluster. Nature 370: 563-566.
-
(1994)
Nature
, vol.370
, pp. 563-566
-
-
Garcia-Fernàndez, J.1
Holland, P.W.H.2
-
33
-
-
21544437575
-
Discussion on the origin of vertebrates
-
Gaskell, W.H., MacBride, E.W., Starling, E.H., Goodrich, E.S., Gadow, H., Smith Woodward, A., Dendy, A., Lankester, E.R., Chalmers Mitchell, P., Gardiner, J.S., et al. 1910. Discussion on the origin of vertebrates. Proc. Linn. Soc. London 122: 9-50.
-
(1910)
Proc. Linn. Soc. London
, vol.122
, pp. 9-50
-
-
Gaskell, W.H.1
MacBride, E.W.2
Starling, E.H.3
Goodrich, E.S.4
Gadow, H.5
Smith Woodward, A.6
Dendy, A.7
Lankester, E.R.8
Chalmers Mitchell, P.9
Gardiner, J.S.10
-
34
-
-
0029977495
-
Evidence of a role for T-box genes in the evolution of limb morphogenesis and the specification of forelimb/hindlimb identity
-
Gibson-Brown, J.J., Agulnik, S.I., Chapman, D.L., Alexiou, M., Garvey, N., Silver, L.M., and Papaioannou, V.E. 1996. Evidence of a role for T-box genes in the evolution of limb morphogenesis and the specification of forelimb/hindlimb identity. Mech. Dev. 56: 93-101.
-
(1996)
Mech. Dev
, vol.56
, pp. 93-101
-
-
Gibson-Brown, J.J.1
Agulnik, S.I.2
Chapman, D.L.3
Alexiou, M.4
Garvey, N.5
Silver, L.M.6
Papaioannou, V.E.7
-
35
-
-
29644448174
-
Identifying neuropeptide and protein hormone receptors in Drosophila melanogaster by exploiting genomic data
-
Hauser, F., Williamson, M., Cazzamali, G., and Grimmelikhuijzen, C.J. 2006. Identifying neuropeptide and protein hormone receptors in Drosophila melanogaster by exploiting genomic data. Brief. Funct. Genomic Proteomics 4: 321-330.
-
(2006)
Brief. Funct. Genomic Proteomics
, vol.4
, pp. 321-330
-
-
Hauser, F.1
Williamson, M.2
Cazzamali, G.3
Grimmelikhuijzen, C.J.4
-
36
-
-
6044269754
-
Cephalochordate (amphioxus) embryos: Procurement, culture, and basic methods
-
Holland, L.Z. and Yu, J.K. 2004. Cephalochordate (amphioxus) embryos: Procurement, culture, and basic methods. Methods Cell Biol. 74: 195-215.
-
(2004)
Methods Cell Biol
, vol.74
, pp. 195-215
-
-
Holland, L.Z.1
Yu, J.K.2
-
37
-
-
0029793746
-
Sequence and developmental expression of AmphiDll, an amphioxus Distal-less gene transcribed in the ectoderm, epidermis and nervous system: Insights into evolution of craniate forebrain and neural crest
-
Holland, N.D., Panganiban, G., Henyey, E.L., and Holland, L.Z. 1996. Sequence and developmental expression of AmphiDll, an amphioxus Distal-less gene transcribed in the ectoderm, epidermis and nervous system: Insights into evolution of craniate forebrain and neural crest. Development 122: 2911-2920.
-
(1996)
Development
, vol.122
, pp. 2911-2920
-
-
Holland, N.D.1
Panganiban, G.2
Henyey, E.L.3
Holland, L.Z.4
-
38
-
-
0003787814
-
-
eds. S. Kawashima and S. Kikuyama pp, Monduzzi, Bologna, Italy
-
Holland, P.W.H., Patton, S.J., Brooke, N.M., and Garcia-Fernàndez, J. 1997. Advances in comparative endocrinology: XIII International Congress of Comparative Endocrinology (eds. S. Kawashima and S. Kikuyama) pp. 247-252. Monduzzi, Bologna, Italy.
-
(1997)
Advances in comparative endocrinology: XIII International Congress of Comparative Endocrinology
, pp. 247-252
-
-
Holland, P.W.H.1
Patton, S.J.2
Brooke, N.M.3
Garcia-Fernàndez, J.4
-
39
-
-
38649129104
-
Classification and nomenclature of all human homeobox genes
-
doi: 10.1186/1741-7007-5-47
-
Holland, P.W.H., Booth, H.A.F., and Bruford, E. 2007. Classification and nomenclature of all human homeobox genes. BMC Biol. 5: 47. doi: 10.1186/1741-7007-5-47.
-
(2007)
BMC Biol
, vol.5
, pp. 47
-
-
Holland, P.W.H.1
Booth, H.A.F.2
Bruford, E.3
-
40
-
-
33750460281
-
Insights into social insects from the genome of the honeybee Apis mellifera
-
The Honeybee Genome Sequencing Consortium
-
The Honeybee Genome Sequencing Consortium. 2006. Insights into social insects from the genome of the honeybee Apis mellifera. Nature 443: 931-949.
-
(2006)
Nature
, vol.443
, pp. 931-949
-
-
-
41
-
-
17644366913
-
NOD-LRR proteins: Role in host-microbial interactions and inflammatory disease
-
Inohara, N., Chamaillard, M., McDonald, C., and Nuñez, G. 2005. NOD-LRR proteins: Role in host-microbial interactions and inflammatory disease. Annu. Rev. Biochem. 74: 355-383.
-
(2005)
Annu. Rev. Biochem
, vol.74
, pp. 355-383
-
-
Inohara, N.1
Chamaillard, M.2
McDonald, C.3
Nuñez, G.4
-
42
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
International Human Genome Sequencing Consortium
-
International Human Genome Sequencing Consortium. 2001. Initial sequencing and analysis of the human genome. Nature 409: 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
-
43
-
-
4944233224
-
Crabp and maf highlight the novelty of the amphioxus club-shaped gland
-
Jackman, W.R., Mougey, J.M., Panopoulou, G.D., and Kimmel, C.B. 2004. Crabp and maf highlight the novelty of the amphioxus club-shaped gland. Acta Zool. Stockholm 85: 91-99.
-
(2004)
Acta Zool. Stockholm
, vol.85
, pp. 91-99
-
-
Jackman, W.R.1
Mougey, J.M.2
Panopoulou, G.D.3
Kimmel, C.B.4
-
44
-
-
7244259101
-
Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype
-
Jaillon, O., Aury, J.-M., Brunet, F., Petit, J.-L., Stange-Thomann, N., Mauceli, E., Bouneau, L., Fischer, C., Ozouf-Costaz, C., Bernot, A., et al. 2004. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 431: 946-957.
-
(2004)
Nature
, vol.431
, pp. 946-957
-
-
Jaillon, O.1
Aury, J.-M.2
Brunet, F.3
Petit, J.-L.4
Stange-Thomann, N.5
Mauceli, E.6
Bouneau, L.7
Fischer, C.8
Ozouf-Costaz, C.9
Bernot, A.10
-
45
-
-
25644452794
-
Structures of complement component C3 provide insights into the function and evolution of immunity
-
Janssen, B.J., Huizinga, E.G., Raaijmakers, H.C., Roos, A., Daha, M.R., Nilsson-Ekdahl, K., Nilsson, B., and Gros, P. 2005. Structures of complement component C3 provide insights into the function and evolution of immunity. Nature 437: 505-511.
-
(2005)
Nature
, vol.437
, pp. 505-511
-
-
Janssen, B.J.1
Huizinga, E.G.2
Raaijmakers, H.C.3
Roos, A.4
Daha, M.R.5
Nilsson-Ekdahl, K.6
Nilsson, B.7
Gros, P.8
-
46
-
-
6044224907
-
Migratory neural crest-like cells form body pigmentation in a urochordate embryo
-
Jeffery, W.R., Strickler, A.G., and Yamamoto, Y. 2004. Migratory neural crest-like cells form body pigmentation in a urochordate embryo. Nature 431: 696-699.
-
(2004)
Nature
, vol.431
, pp. 696-699
-
-
Jeffery, W.R.1
Strickler, A.G.2
Yamamoto, Y.3
-
47
-
-
0842303307
-
Unraveling V(D)J recombination; insights into gene regulation
-
Jung, D. and Alt, F.W. 2004. Unraveling V(D)J recombination; insights into gene regulation. Cell 116: 299-311.
-
(2004)
Cell
, vol.116
, pp. 299-311
-
-
Jung, D.1
Alt, F.W.2
-
48
-
-
0036226603
-
BLAT - The BLAST-like alignment tool
-
Kent, W.J. 2002. BLAT - The BLAST-like alignment tool. Genome Res. 12: 656-664.
-
(2002)
Genome Res
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
49
-
-
20144378876
-
Cephalochordate melanopsin: Evolutionary linkage between invertebrate visual cells and vertebrate photosensitive retinal ganglion cells
-
Koyanagi, M., Kubokawa, K., Tsukamoto, H., Shichida, Y., and Terakita, A. 2005. Cephalochordate melanopsin: Evolutionary linkage between invertebrate visual cells and vertebrate photosensitive retinal ganglion cells. Curr. Biol. 15: 1065-1069.
-
(2005)
Curr. Biol
, vol.15
, pp. 1065-1069
-
-
Koyanagi, M.1
Kubokawa, K.2
Tsukamoto, H.3
Shichida, Y.4
Terakita, A.5
-
50
-
-
0035964941
-
Ci-opsin1, a vertebrate-type opsin gene, expressed in the larval ocellus of the ascidian Ciona intestinalis
-
Kusakabe, T., Kusakabe, R., Kawakami, I., Satou, Y., Satoh, N., and Tsuda, M. 2001. Ci-opsin1, a vertebrate-type opsin gene, expressed in the larval ocellus of the ascidian Ciona intestinalis. FEBS Lett. 506: 69-72.
-
(2001)
FEBS Lett
, vol.506
, pp. 69-72
-
-
Kusakabe, T.1
Kusakabe, R.2
Kawakami, I.3
Satou, Y.4
Satoh, N.5
Tsuda, M.6
-
51
-
-
4644264536
-
Sensory systems in amphioxus: A window on the ancestral chordate condition
-
Lacalli, T.C. 2004. Sensory systems in amphioxus: A window on the ancestral chordate condition. Brain Behav. Evol. 64: 148-162.
-
(2004)
Brain Behav. Evol
, vol.64
, pp. 148-162
-
-
Lacalli, T.C.1
-
52
-
-
0031043135
-
The internal thioester and the covalent binding properties of the complement proteins C3 and C4
-
Law, S.K. and Dodds, A.W. 1997. The internal thioester and the covalent binding properties of the complement proteins C3 and C4. Protein Sci. 6: 263-274.
-
(1997)
Protein Sci
, vol.6
, pp. 263-274
-
-
Law, S.K.1
Dodds, A.W.2
-
53
-
-
0038627514
-
Multi-factorial role of GnRH-I and GnRH-II in the human ovary
-
Leung, P.C.K., Cheng, C.K., and Zhu, X.-M. 2003. Multi-factorial role of GnRH-I and GnRH-II in the human ovary. Mol. Cell. Endocrinol. 202: 145-153.
-
(2003)
Mol. Cell. Endocrinol
, vol.202
, pp. 145-153
-
-
Leung, P.C.K.1
Cheng, C.K.2
Zhu, X.-M.3
-
54
-
-
27744492083
-
Reconstructing immune phylogeny: New perspectives
-
Litman, G.W., Cannon, J.P., and Dishaw, L.J. 2005. Reconstructing immune phylogeny: New perspectives. Nat. Rev. Immunol. 5: 866-879.
-
(2005)
Nat. Rev. Immunol
, vol.5
, pp. 866-879
-
-
Litman, G.W.1
Cannon, J.P.2
Dishaw, L.J.3
-
55
-
-
0038303006
-
Dispersal of NK homeobox gene clusters in amphioxus and humans
-
Luke, G.N., Castro, L.F.C., McLay, K., Bird, C., Coulson, A., and Holland, P.W.H. 2003. Dispersal of NK homeobox gene clusters in amphioxus and humans. Proc. Natl. Acad. Sci. 100: 5292-5295.
-
(2003)
Proc. Natl. Acad. Sci
, vol.100
, pp. 5292-5295
-
-
Luke, G.N.1
Castro, L.F.C.2
McLay, K.3
Bird, C.4
Coulson, A.5
Holland, P.W.H.6
-
56
-
-
2542457495
-
Inflammatory caspases: Linking an intracellular innate immune system to autoinflammatory diseases
-
Martinon, F. and Tschopp, J. 2004. Inflammatory caspases: Linking an intracellular innate immune system to autoinflammatory diseases. Cell 117: 561-574.
-
(2004)
Cell
, vol.117
, pp. 561-574
-
-
Martinon, F.1
Tschopp, J.2
-
57
-
-
4544378019
-
Gene-regulatory interactions in neural crest evolution and development
-
Meulemans, D. and Bronner-Fraser, M. 2004. Gene-regulatory interactions in neural crest evolution and development. Dev. Cell 7: 291-299.
-
(2004)
Dev. Cell
, vol.7
, pp. 291-299
-
-
Meulemans, D.1
Bronner-Fraser, M.2
-
58
-
-
0037012574
-
Gene duplications in the prototypical cephalochordate amphioxus
-
Minguillón, C., Ferrier, D.E., Cebrián, C., and Garcia-Fernàndez, J. 2002. Gene duplications in the prototypical cephalochordate amphioxus. Gene 287: 121-128.
-
(2002)
Gene
, vol.287
, pp. 121-128
-
-
Minguillón, C.1
Ferrier, D.E.2
Cebrián, C.3
Garcia-Fernàndez, J.4
-
59
-
-
1642513847
-
The Anopheles gambiae genome: An update
-
Mongin, E., Louis, C., Holt, R.A., Birney, E., and Collins, F.H. 2004. The Anopheles gambiae genome: An update. Trends Parasitol. 20: 49-52.
-
(2004)
Trends Parasitol
, vol.20
, pp. 49-52
-
-
Mongin, E.1
Louis, C.2
Holt, R.A.3
Birney, E.4
Collins, F.H.5
-
60
-
-
33846481302
-
Antigen-receptor genes of the agnathan lamprey are assembled by a process involving copy choice
-
Nagawa, F., Kishishita, N., Shimizu, K., Hirose, S., Miyoshi, M., Nezu, J., Nishimura, T., Nishizumi, H., Takahashi, Y., Hashimoto, S., et al. 2007. Antigen-receptor genes of the agnathan lamprey are assembled by a process involving copy choice. Nat. Immunol. 8: 206-213.
-
(2007)
Nat. Immunol
, vol.8
, pp. 206-213
-
-
Nagawa, F.1
Kishishita, N.2
Shimizu, K.3
Hirose, S.4
Miyoshi, M.5
Nezu, J.6
Nishimura, T.7
Nishizumi, H.8
Takahashi, Y.9
Hashimoto, S.10
-
61
-
-
33748431853
-
Genomic view of the evolution of the complement system
-
Nonaka, M. and Kimura, A. 2006. Genomic view of the evolution of the complement system. Immunogenetics 58: 701-713.
-
(2006)
Immunogenetics
, vol.58
, pp. 701-713
-
-
Nonaka, M.1
Kimura, A.2
-
62
-
-
28944431533
-
Conserved synteny between the Ciona genome and human paralogons identifies large duplication events in the molecular evolution of the insulin-relaxin gene family
-
Olinski, R.P., Lundin, L.-G., and Hallböök, F. 2006. Conserved synteny between the Ciona genome and human paralogons identifies large duplication events in the molecular evolution of the insulin-relaxin gene family. Mol. Biol. Evol. 23: 10-22.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 10-22
-
-
Olinski, R.P.1
Lundin, L.-G.2
Hallböök, F.3
-
63
-
-
32944477673
-
The evolution of adaptive immunity
-
Pancer, Z. and Cooper, M.D. 2006. The evolution of adaptive immunity. Annu. Rev. Immunol. 24: 497-518.
-
(2006)
Annu. Rev. Immunol
, vol.24
, pp. 497-518
-
-
Pancer, Z.1
Cooper, M.D.2
-
64
-
-
33751316959
-
In vivo enhancer analysis of human conserved non-coding P sequences
-
Pennacchio, L.A., Ahituv, N., Moses, A.M., Prabhakar, S., Nobrega, M.A., Shoukry, M., Minovitsky, S., Dubchak, I., Holt, A., Lewis, K.D., et al. 2006. In vivo enhancer analysis of human conserved non-coding P sequences. Nature 444: 499-502.
-
(2006)
Nature
, vol.444
, pp. 499-502
-
-
Pennacchio, L.A.1
Ahituv, N.2
Moses, A.M.3
Prabhakar, S.4
Nobrega, M.A.5
Shoukry, M.6
Minovitsky, S.7
Dubchak, I.8
Holt, A.9
Lewis, K.D.10
-
65
-
-
1842485064
-
Evidence for a Hox14 paralog group in vertebrates
-
Powers, T.P. and Amemiya, C.T. 2004. Evidence for a Hox14 paralog group in vertebrates. Curr. Biol. 14: R183-R184.
-
(2004)
Curr. Biol
, vol.14
-
-
Powers, T.P.1
Amemiya, C.T.2
-
66
-
-
33846052292
-
Evidence for a microRNA expansion in the bilaterian ancestor
-
Prochnik, S.E., Rokhsar, D.S., and Aboobaker, A.A. 2007. Evidence for a microRNA expansion in the bilaterian ancestor. Dev. Genes Evol. 217: 73-77.
-
(2007)
Dev. Genes Evol
, vol.217
, pp. 73-77
-
-
Prochnik, S.E.1
Rokhsar, D.S.2
Aboobaker, A.A.3
-
67
-
-
45749086679
-
The amphioxus genome and the evolution of the chordate karyotype
-
in press
-
Putnam, N.H., Blow, M.J., Butts, T., Ferrier, D.E.K., Furlong, R.F., Hellsten, U., Kawashima, T., Robinson-Rechavi, M., Shoguchi, D., Terry, A., et al. 2008. The amphioxus genome and the evolution of the chordate karyotype. Nature (in press).
-
(2008)
Nature
-
-
Putnam, N.H.1
Blow, M.J.2
Butts, T.3
Ferrier, D.E.K.4
Furlong, R.F.5
Hellsten, U.6
Kawashima, T.7
Robinson-Rechavi, M.8
Shoguchi, D.9
Terry, A.10
-
68
-
-
33751539851
-
Opsins and clusters of sensory G-protein-coupled receptors in the sea urchin genome
-
Raible, F., Tessmar-Raible, K., Arboleda, E., Kaller, T., Bork, P., Arendt, D., and Arnone, M.I. 2006. Opsins and clusters of sensory G-protein-coupled receptors in the sea urchin genome. Dev. Biol. 300: 461-475.
-
(2006)
Dev. Biol
, vol.300
, pp. 461-475
-
-
Raible, F.1
Tessmar-Raible, K.2
Arboleda, E.3
Kaller, T.4
Bork, P.5
Arendt, D.6
Arnone, M.I.7
-
69
-
-
33750980112
-
Genomic insights into the immune system of the sea urchin
-
Rast, J.P., Smith, L.C., Loza-Coll, M., Hibino, T., and Litman, G.W. 2006. Genomic insights into the immune system of the sea urchin. Science 314: 952-956.
-
(2006)
Science
, vol.314
, pp. 952-956
-
-
Rast, J.P.1
Smith, L.C.2
Loza-Coll, M.3
Hibino, T.4
Litman, G.W.5
-
70
-
-
34249065874
-
Evolution and diversification of lamprey antigen receptors: Evidence for involvement of an AID-APOBEC family cytosine deaminase
-
Rogozin, I.B., Iyer, L.M., Liang, L., Glazko, G.V., Liston, V.G., Pavlov, Y.I., Aravind, L., and Pancer, Z. 2007. Evolution and diversification of lamprey antigen receptors: Evidence for involvement of an AID-APOBEC family cytosine deaminase. Nat. Immunol. 8: 647-656.
-
(2007)
Nat. Immunol
, vol.8
, pp. 647-656
-
-
Rogozin, I.B.1
Iyer, L.M.2
Liang, L.3
Glazko, G.V.4
Liston, V.G.5
Pavlov, Y.I.6
Aravind, L.7
Pancer, Z.8
-
71
-
-
33746161060
-
A retinoic acid-Hox hierarchy controls both anterior/posterior patterning and neuronal specification in the developing central nervous system of the cephalochordate amphioxus
-
Schubert, M., Holland, N.D., Laudet, V., and Holland, L.Z. 2006. A retinoic acid-Hox hierarchy controls both anterior/posterior patterning and neuronal specification in the developing central nervous system of the cephalochordate amphioxus. Dev. Biol. 296: 190-202.
-
(2006)
Dev. Biol
, vol.296
, pp. 190-202
-
-
Schubert, M.1
Holland, N.D.2
Laudet, V.3
Holland, L.Z.4
-
72
-
-
44449179993
-
Effect of the endostyle of the lancelet (Branchiostoma lanceolatum Pall.) on the metamorphosis of axolotl
-
Sembrat, K. 1953. Effect of the endostyle of the lancelet (Branchiostoma lanceolatum Pall.) on the metamorphosis of axolotl. Zoolog. Polon. 6: 3-19.
-
(1953)
Zoolog. Polon
, vol.6
, pp. 3-19
-
-
Sembrat, K.1
-
74
-
-
33750995860
-
The genome of the sea urchin Strongylocentrotus purpuratus
-
Sodergren, E., Weinstock, G.M., Davidson, E.H., Cameron, R.A., Gibbs, R.A., Angerer, R.C., Angerer, L.M., Arnone, M.I., Burgess, D.R., Burke, R.D., et al. 2006. The genome of the sea urchin Strongylocentrotus purpuratus. Science 314: 941-952.
-
(2006)
Science
, vol.314
, pp. 941-952
-
-
Sodergren, E.1
Weinstock, G.M.2
Davidson, E.H.3
Cameron, R.A.4
Gibbs, R.A.5
Angerer, R.C.6
Angerer, L.M.7
Arnone, M.I.8
Burgess, D.R.9
Burke, R.D.10
-
75
-
-
4243088097
-
The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
-
doi: 10.1371/journal.pbio.0000045
-
Stein, L.D., Bao, Z., Blasiar, D., Blumenthal, T., Brent, M.R., Chen, N., Chinwalla, A., Clarke, L., Clee, C., Coghlan, A., et al. 2003. The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics. PLoS Biol. 1: e45. doi: 10.1371/journal.pbio.0000045.
-
(2003)
PLoS Biol
, vol.1
-
-
Stein, L.D.1
Bao, Z.2
Blasiar, D.3
Blumenthal, T.4
Brent, M.R.5
Chen, N.6
Chinwalla, A.7
Clarke, L.8
Clee, C.9
Coghlan, A.10
-
76
-
-
23044484252
-
Heterodimeric fly glycoprotein hormone-alpha2 (GPA2) and glycoprotein hormone-beta5 (GPB5) activate fly leucine-rich repeat-containing G protein-coupled receptor-1 (DLGR1) and stimulation of human thyrotropin receptors by chimeric fly GPA2 and human GPB5
-
Sudo, S., Kuwabara, Y., Park, J.-I., Hsu, S.Y., and Hsueh, A.J.W. 2005. Heterodimeric fly glycoprotein hormone-alpha2 (GPA2) and glycoprotein hormone-beta5 (GPB5) activate fly leucine-rich repeat-containing G protein-coupled receptor-1 (DLGR1) and stimulation of human thyrotropin receptors by chimeric fly GPA2 and human GPB5. Endocrinology 146: 3596-3604.
-
(2005)
Endocrinology
, vol.146
, pp. 3596-3604
-
-
Sudo, S.1
Kuwabara, Y.2
Park, J.-I.3
Hsu, S.Y.4
Hsueh, A.J.W.5
-
77
-
-
0242458202
-
Neuropsin (Opn5): A novel opsin identified in mammalian neural tissue
-
Tarttelin, E.E., Bellingham, J., Hankins, M.W., Foster, R.G., and Lucas, R.J. 2003. Neuropsin (Opn5): A novel opsin identified in mammalian neural tissue. FEBS Lett. 554: 410-416.
-
(2003)
FEBS Lett
, vol.554
, pp. 410-416
-
-
Tarttelin, E.E.1
Bellingham, J.2
Hankins, M.W.3
Foster, R.G.4
Lucas, R.J.5
-
78
-
-
23844511239
-
Tunicate gonadotropin-releasing hormone GnRH peptides selectively activate Ciona intestinalis GnRH receptors and the green monkey type II GnRH receptor
-
Tello, J.A., Rivier, J.E., and Sherwood, N.M. 2005. Tunicate gonadotropin-releasing hormone GnRH peptides selectively activate Ciona intestinalis GnRH receptors and the green monkey type II GnRH receptor. Endocrinology 146: 4061-4073.
-
(2005)
Endocrinology
, vol.146
, pp. 4061-4073
-
-
Tello, J.A.1
Rivier, J.E.2
Sherwood, N.M.3
-
79
-
-
16844383383
-
The opsins
-
doi: 10.1186/gb-2005-6-3-213
-
Terakita, A. 2005. The opsins. Genome Biol. 6: 213. doi: 10.1186/gb-2005-6-3-213.
-
(2005)
Genome Biol
, vol.6
, pp. 213
-
-
Terakita, A.1
-
80
-
-
0040767955
-
Identification of labeled thyroxine and triiodothyronine in amphioxus treated with 131-I
-
Tong, W., Kerkof, P., and Chaikoff, I.L. 1962. Identification of labeled thyroxine and triiodothyronine in amphioxus treated with 131-I. Biochim. Biophys. Acta 56: 326-331.
-
(1962)
Biochim. Biophys. Acta
, vol.56
, pp. 326-331
-
-
Tong, W.1
Kerkof, P.2
Chaikoff, I.L.3
-
81
-
-
0035895505
-
The sequence of the human genome
-
Venter, J.C., Adams, M.D., Myers, E.W., Li, P.W., Mural, R.J., Sutton, G.G., Smith, H.O., Yandell, M., Evans, C.A., Holt, R.A., et al. 2001. The sequence of the human genome. Science 291: 1304-1351.
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.1
Adams, M.D.2
Myers, E.W.3
Li, P.W.4
Mural, R.J.5
Sutton, G.G.6
Smith, H.O.7
Yandell, M.8
Evans, C.A.9
Holt, R.A.10
-
82
-
-
1542563409
-
Initial sequencing and comparative analysis of the mouse genome
-
Waterston, R.H., Lindblad-Toh, K., Birney, E., Rogers, J., Abril, J.F., Agarwal, P., Agarwala, R., Ainscough, R., Alexandersson, M., An, P., et al. 2002. Initial sequencing and comparative analysis of the mouse genome. Nature 420: 520-562.
-
(2002)
Nature
, vol.420
, pp. 520-562
-
-
Waterston, R.H.1
Lindblad-Toh, K.2
Birney, E.3
Rogers, J.4
Abril, J.F.5
Agarwal, P.6
Agarwala, R.7
Ainscough, R.8
Alexandersson, M.9
An, P.10
-
83
-
-
46449117252
-
Distribution of prolactin and PRL receptor-like immunoreactivities in the nervous system, Hatschek's pit and other tissues of amphioxus Branchiostoma belcheri
-
Weng, Y.-Z., Song, H.-X., and Fang, Y.-Q. 2006. Distribution of prolactin and PRL receptor-like immunoreactivities in the nervous system, Hatschek's pit and other tissues of amphioxus Branchiostoma belcheri. Acta Zool. Sinica 52: 907-915.
-
(2006)
Acta Zool. Sinica
, vol.52
, pp. 907-915
-
-
Weng, Y.-Z.1
Song, H.-X.2
Fang, Y.-Q.3
-
84
-
-
33645958613
-
TIR, CARD and PYRIN: Three domains for an antimicrobial triad
-
Werts, C., Girardin, S.E., and Philpott, D.J. 2006. TIR, CARD and PYRIN: Three domains for an antimicrobial triad. Cell Death Differ. 13: 798-815.
-
(2006)
Cell Death Differ
, vol.13
, pp. 798-815
-
-
Werts, C.1
Girardin, S.E.2
Philpott, D.J.3
-
85
-
-
20044366725
-
-
Woolfe, A., Goodson, M., Goode, D.K., Snell, P., McEwen, G.K., Vavouri, T., Smith, S.F., North, P., Callaway, H., Kelly, K., et al. 2005. Highly conserved non-coding sequences are associated with vertebrate development. PLoS Biol. 3: e7.doi: 10.1371/journal.pbio.0030007.
-
Woolfe, A., Goodson, M., Goode, D.K., Snell, P., McEwen, G.K., Vavouri, T., Smith, S.F., North, P., Callaway, H., Kelly, K., et al. 2005. Highly conserved non-coding sequences are associated with vertebrate development. PLoS Biol. 3: e7.doi: 10.1371/journal.pbio.0030007.
-
-
-
-
86
-
-
0038786653
-
Genomewide survey of developmentally relevant genes in Ciona intestinalis III. Genes for Fox, ETS, nuclear receptors and NFκB
-
Yagi, K., Satou, Y., Mazet, F., Shimeld, S.M., Degnan, B., Rokhsar, D., Levine, M., Kohara, Y., and Satoh, N.A. 2003. Genomewide survey of developmentally relevant genes in Ciona intestinalis III. Genes for Fox, ETS, nuclear receptors and NFκB. Dev. Genes Evol. 213: 235-244.
-
(2003)
Dev. Genes Evol
, vol.213
, pp. 235-244
-
-
Yagi, K.1
Satou, Y.2
Mazet, F.3
Shimeld, S.M.4
Degnan, B.5
Rokhsar, D.6
Levine, M.7
Kohara, Y.8
Satoh, N.A.9
-
87
-
-
0030227075
-
Molecular evolution of retinal and nonretinal opsins
-
Yokoyama, S. 1996. Molecular evolution of retinal and nonretinal opsins. Genes Cells 1: 787-794.
-
(1996)
Genes Cells
, vol.1
, pp. 787-794
-
-
Yokoyama, S.1
-
88
-
-
33846912724
-
Axial patterning in cephalochordates and the evolution of the organizer
-
Yu, J.-K., Satou, Y., Holland, N.D., Shin-I, T., Kohara, Y., Satoh, N., Bronner-Fraser, M., and Holland, L.Z. 2007. Axial patterning in cephalochordates and the evolution of the organizer. Nature 445: 613-617.
-
(2007)
Nature
, vol.445
, pp. 613-617
-
-
Yu, J.-K.1
Satou, Y.2
Holland, N.D.3
Shin-I, T.4
Kohara, Y.5
Satoh, N.6
Bronner-Fraser, M.7
Holland, L.Z.8
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