Gene regulatory networks and the evolution of animal body plans

Science

Volumn 311, Issue 5762, 2006, Pages 796-797

  Davidson, Eric H ^a   Erwin, Douglas H ^b,c  

^a CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^b DEPARTMENT OF PALEOBIOLOGY   (United States)

^c SANTA FE INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENES; HIERARCHICAL SYSTEMS; MORPHOLOGY;

GENE REGULATORY NETWORKS (GRN); GRN KERNELS; PALEONTOLOGY; PHYLETIC BODY PLANS;

GENETIC ENGINEERING;

GENETICS;

ANIMAL; EVOLUTION; GENE CONTROL; GENE REGULATORY NETWORK; GENETIC CONSERVATION; LOWER CAMBRIAN; MORPHOGENESIS; NONHUMAN; PALEONTOLOGY; PHYLUM; PHYSICAL DEVELOPMENT; PRIORITY JOURNAL; REVIEW; SPECIES DIFFERENTIATION;

ADAPTATION, BIOLOGICAL; ANIMALS; BODY PATTERNING; EMBRYONIC DEVELOPMENT; EVOLUTION; FOSSILS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, REGULATOR; GENETIC SPECIATION; MORPHOGENESIS; SIGNAL TRANSDUCTION; TRANSCRIPTION FACTORS;

ANIMALIA;

EID: 32444446240     PISSN: 00368075     EISSN: None     Source Type: Journal    
DOI: 10.1126/science.1113832     Document Type: Review

References (58)

1. M. Levine, E. H. Davidson, Proc. Natl. Acad. Sci. U.S.A. 102, 4936 (2005).
2. A. Ochoa-Espinosa et al., Proc. Natl. Acad. Sci. U.S.A. 102, 4960 (2005).
3. T. Koide, T. Hayata, K. Cho, Proc. Natl. Acad. Sri. U.S.A. 102, 4943 (2005).
4. H. Singh, K. Medina, Proc. Natl. Acad. Sci. U.S.A. 102, 4949 (2005).
5. T. Inoue, M. Wang, T. Ririe, J. Fernandes, P. Sternberg, Proc. Natl. Acad. Sri. U.S.A. 102, 4972 (2005).
6. M. F. Maduro, J. H. Rothman, Dev. Biol. 246, 68 (2002).
7. R. M. Cripps, E. N. Olson, Dev. Biol. 246, 14 (2002).
8. I. Reim, J. P. Mohler, M. Frasch, Mech. Dev. 122, 1056 (2005).
9. P. Oliveri, E. H. Davidson, Curr. Opin. Genet. Dev. 14, 351 (2004).
10. E. H. Davidson, Gene Regulatory Systems. Development and Evolution (Academic Press, San Diego, 2001).
11. J. W. Valentine, On the Origin of Phyla (Univ. of Chicago Press, Chicago, 2004).
12. D. H. Erwin, J. W. Valentine, J. J. Sepkoski Jr., Evolution Int. J. Org. Evolution 41, 1177 (1987).
13. J.-Y. Chen, The Dawn of Animal World (Jiangsu Science and Technology Publishing House, Nanjing, 2004).
14. V. F. Hinman, A. Nguyen, R. A. Cameron, E. H. Davidson, Proc. Natl. Acad. Sci. U.S.A. 100, 13356 (2003).
15. For sources of each linkage shown, see (8, 9) and supporting online material.
16. E. H. Davidson et al., Science 295, 1669 (2002).
17. C. J. Lowe et al., Cell 113, 853 (2003).
18. R. Lichtneckert, H. Reichert, Heredity 94, 465 (2005).
19. F. Hirth, L. Kammermeirt, E. Frei, U. Walldorf, M. Reichert, Development 130, 2365 (2003).
20. O. Arendt, K. Nübler-Jung, Development 126, 2309 (1999).
21. R. A. Cornell, T. Von Ohlen, Curr. Opin. Neurobiol. 10, 63 (2000).
22. C. Punzo, M. Seimiya, S. Filster, W. J. Gehring, S. Plaza, Development 129, 62S (2002).
23. S. J. Silver, I. Rebay, Development 132, 3 (2005).
24. B. A. Afouda, A. Cia-Uitz, R. Patient, Development 132, 763 (2005).
25. R. A. Shivdasani, Dev. Biol. 249, 191 (2002).
26. J. A. Hoffmann, F. C. Kafatos, C. A. Janeway Jr., R. A. B. Ezekowitz, Science 284, 1313 (1999).
27. E. V. Rothenberg, E. H. Davidson, in Innate Immunity, R. A. B. Ezekowitz, J. A. Hoffman, Eds. (Humana, Totowa, NJ, 2003), pp. 61-88.
28. H. Wada, P. W. H. Holland, S. Sato, H. Yamamoto, N. Satoh, Dev. Biol. 187, 240 (1997).
29. O. Meulemans, M. Bronner-Fraser, Dev. Cell 7, 291 (2004).
30. S. Barolo, J. W. Posakorty, Genes Dev. 16, 1167 (2002).
31. K. M. Cadigan, R. Nusse, Genes Dev. 11, 3286 (1997).
32. D. M. Kingsley, Genes Dev. 8, 133 (1994).
33. G. Szebenyi, J. F. Fallon, Int. Rev. Cytol. 185, 45 (1999).
34. A. P. McMahon, P. W. Ingham, C. J. Tabin, Curr. Top. Dev. Biol. 53, 1 (2003).
35. S. Artavanis-Tsakonis, K. Matsuno, M. E. Fortini, Science 268, 225 (1995).
36. B.-Z. Shilo, Exp. Cell Res. 284, 140 (2003).
37. M. Tokuoka, K. S. Imai, Y. Satou, N. Satoh, Dev. Biol. 274, 211 (2004).
38. B. L. M. Hogan, Genes Dev. 10, 1580 (1996).
39. J. C. Avise, Phylogeography: The History and Formation of Species (Harvard Univ. Press, Cambridge, MA, 2000).
40. H. Bolouri, E. H. Davidson, Dev. Biol. 246, 2 (2002).
41. X. Zhu, M. G. Rosenfeld, Curr. Opin. Genet. Dev. 14, 567 (2004).
42. S. D. Weatherbee, G. Balder, J. Kim, A. Hudson, S. Carroll, Genes Dev. 12, 1474 (1998).
43. B. M. Hersch, S. B. Carroll, Development 132, 1567 (2005).
44. R. Galant, C. M. Walsh, S. B. Carroll, Development 129, 3115 (2002).
45. D. M. Wellik, M. R. Capecchi, Science 301, 363 (2003).
46. Y. Tomoyasu, S. R. Wheller, R. E. Denell, Nature 433, 643 (2005).
47. K. J. Peterson et al., Proc. Natl. Acad. Sci. U.S.A. 101, 6536 (2004).
48. S. Aris-Brosou, Z. Yang, Syst. Biol. 51, 703 (2002).
49. E. J. Douzery, E. A. Snell, E. Bapteste, F. Delsuc, H. Philippe, Proc. Natl. Acad. Sci. U.S.A. 101, 15386 (2004).
50. D. H. Erwin, E. H. Davidson, Development 129, 3021 (2002).
51. D. Condon et al., Science 308, 95 (2005).
52. J. Maynard Smith et al., Q. Rev. Biol. 60, 265 (1985).
53. K. Schwenk, Zoology 98, 251 (1994).
54. P. Alberch, in Evolution and Development, J. T. Bonner, Ed. (Springer-Verlag, Berlin, 1982), pp. 312-332.
55. W. J. R. Longabaugh, E. H. Davidson, H. Bolouri, Dev. Biol. 283, 1 (2005).
56. http://sugp.caltech.edu/endomes
57. I. Reim, M. Frasch, Development 132, 4911 (2005).
58. E.H.D. acknowledges support from NASA grant NAG2-1587, U.S. Department of Energy grant DE-FG02-03ER63584, and NIH grant HD37105. D.H.E. acknowledges the Packard Foundation and the Santa Fe Institute. We thank A. H. Knoll, D. Krakauer, E. V. Rothernberg, M. Levine, and four anonymous reviewers for useful comments on earlier drafts of the manuscript.