-
1
-
-
34547662247
-
Meiotic silencing and the epigenetics of sex
-
Kelly WG, Aramayo R (2007) Meiotic silencing and the epigenetics of sex. Chromosome Res 15: 633-651.
-
(2007)
Chromosome Res
, vol.15
, pp. 633-651
-
-
Kelly, W.G.1
Aramayo, R.2
-
2
-
-
34250626425
-
Meiotic sex chromosome inactivation
-
Turner JM (2007) Meiotic sex chromosome inactivation. Development 134: 1823-1831.
-
(2007)
Development
, vol.134
, pp. 1823-1831
-
-
Turner, J.M.1
-
3
-
-
2142822506
-
The XY body: A specialized meiotic chromatin domain
-
Handel MA (2004) The XY body: a specialized meiotic chromatin domain. Exp Cell Res 296: 57-63.
-
(2004)
Exp Cell Res
, vol.296
, pp. 57-63
-
-
Handel, M.A.1
-
4
-
-
0036333386
-
Xchromosome silencing in the germline of C. elegans
-
Kelly WG, Schaner CE, Dernburg AF, Lee MH, Kim SK, et al. (2002) Xchromosome silencing in the germline of C. elegans. Development 129: 479-492.
-
(2002)
Development
, vol.129
, pp. 479-492
-
-
Kelly, W.G.1
Schaner, C.E.2
Dernburg, A.F.3
Lee, M.H.4
Kim, S.K.5
-
5
-
-
12844280588
-
Silencing of unpaired chromatin and histone H2A ubiquitination in mammalian meiosis
-
DOI 10.1128/MCB.25.3.1041-1053.2005
-
Baarends WM, Wassenaar E, van der Laan R, Hoogerbrugge J, Sleddens- Linkels E, et al. (2005) Silencing of unpaired chromatin and histone H2A ubiquitination in mammalian meiosis. Mol Cell Biol 25: 1041-1053. (Pubitemid 40165811)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.3
, pp. 1041-1053
-
-
Baarends, W.M.1
Wassenaar, E.2
Van Der Laan, R.3
Hoogerbrugge, J.4
Sleddens-Linkels, E.5
Hoeijmakers, J.H.J.6
De Boer, P.7
Grootegoed, J.A.8
-
6
-
-
11244350100
-
Silencing of unsynapsed meiotic chromosomes in the mouse
-
DOI 10.1038/ng1484
-
Turner JM, Mahadevaiah SK, Fernandez-Capetillo O, Nussenzweig A, Xu X, et al. (2005) Silencing of unsynapsed meiotic chromosomes in the mouse. Nat Genet 37: 41-47. (Pubitemid 40070938)
-
(2005)
Nature Genetics
, vol.37
, Issue.1
, pp. 41-47
-
-
Turner, J.M.A.1
Mahadevaiah, S.K.2
Fernandez-Capetillo, O.3
Nussenzweig, A.4
Xu, X.5
Deng, C.-X.6
Burgoyne, P.S.7
-
7
-
-
11244249864
-
Synapsis or silence
-
Schimenti J (2005) Synapsis or silence. Nat Genet 37: 11-13.
-
(2005)
Nat Genet
, vol.37
, pp. 11-13
-
-
Schimenti, J.1
-
8
-
-
0347716447
-
Meiotic pairing and imprinted X chromatin assembly in Caenorhabditis elegans
-
DOI 10.1038/ng1283
-
Bean C, Schaner CE, Kelly WG (2004) Meiotic pairing and imprinted X chromatin assembly in Caenorhabditis elegans. Nat Genet 36: 100-105. (Pubitemid 38056215)
-
(2004)
Nature Genetics
, vol.36
, Issue.1
, pp. 100-105
-
-
Bean, C.J.1
Schaner, C.E.2
Kelly, W.G.3
-
9
-
-
27644457375
-
EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired DNA during C. elegans meiosis
-
DOI 10.1016/j.cub.2005.09.049, PII S0960982205012108
-
Maine EM, Hauth J, Ratliff T, Vought VE, She X, et al. (2005) EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired DNA during C. elegans meiosis. Curr Biol 15: 1972-1978. (Pubitemid 41566147)
-
(2005)
Current Biology
, vol.15
, Issue.21
, pp. 1972-1978
-
-
Maine, E.M.1
Hauth, J.2
Ratliff, T.3
Vought, V.E.4
She, X.5
Kelly, W.G.6
-
10
-
-
0035097808
-
Recombinational DNA double-strand breaks in mice precede synapsis
-
DOI 10.1038/85830
-
Mahadevaiah SK, Turner JM, Baudat F, Rogakou EP, de Boer P, et al. (2001) Recombinational DNA double-strand breaks in mice precede synapsis. Nat Genet 27: 271-276. (Pubitemid 32201847)
-
(2001)
Nature Genetics
, vol.27
, Issue.3
, pp. 271-276
-
-
Mahadevaiah, S.K.1
Turner, J.M.A.2
Baudat, F.3
Rogakou, E.P.4
De Boer, P.5
Blanco-Rodriguez, J.6
Jasin, M.7
Keeney, S.8
Bonner, W.M.9
Burgoyne, P.S.10
-
11
-
-
9344256045
-
Dynamic histone modifications mark sex chromosome inactivation and reactivation during mammalian spermatogenesis
-
Khalil AM, Boyar FZ, Driscoll DJ (2004) Dynamic histone modifications mark sex chromosome inactivation and reactivation during mammalian spermatogenesis. Proc Natl Acad Sci U S A 101: 16583-16587.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 16583-16587
-
-
Khalil, A.M.1
Boyar, F.Z.2
Driscoll, D.J.3
-
12
-
-
8744313837
-
Sc localizes to the XY body and to other chromosomal regions that are unpaired and transcriptionally silenced during male meiotic prophase
-
DOI 10.1242/jcs.01368
-
van der Laan R, Uringa EJ, Wassenaar E, Hoogerbrugge JW, Sleddens E, et al. (2004) Ubiquitin ligase Rad18Sc localizes to the XY body and to other chromosomal regions that are unpaired and transcriptionally silenced during male meiotic prophase. J Cell Sci 117: 5023-5033. (Pubitemid 39517518)
-
(2004)
Journal of Cell Science
, vol.117
, Issue.21
, pp. 5023-5033
-
-
Van Der Laan, R.1
Uringa, E.-J.2
Wassenaar, E.3
Hoogerbrugge, J.W.4
Sleddens, E.5
Odijk, H.6
Roest, H.P.7
De Boer, P.8
Hoeijmakers, J.H.J.9
Grootegoed, J.A.10
Baarends, W.M.11
-
13
-
-
22344442015
-
Mouse Sycp1 functions in synaptonemal complex assembly, meiotic recombination, and XY body formation
-
DOI 10.1101/gad.329705
-
de Vries FA, de Boer E, van den Bosch M, Baarends WM, Ooms M, et al. (2005) Mouse Sycp1 functions in synaptonemal complex formation, meiotic recombination, and XY body formation. Genes Dev 19: 1376-1389. (Pubitemid 41003026)
-
(2005)
Genes and Development
, vol.19
, Issue.11
, pp. 1376-1389
-
-
De Vries, F.A.T.1
De Boer, E.2
Van Den Bosch, M.3
Baarends, W.M.4
Ooms, M.5
Yuan, L.6
Liu, J.-G.7
Van Zeeland, A.A.8
Heyting, C.9
Pastink, A.10
-
15
-
-
0038463581
-
An Argonaute-like protein is required for meiotic silencing
-
Lee DW, Pratt RJ, McLaughlin M, Aramayo R (2003) An argonaute-like protein is required for meiotic silencing. Genetics 164: 821-828. (Pubitemid 36773516)
-
(2003)
Genetics
, vol.164
, Issue.2
, pp. 821-828
-
-
Lee, D.W.1
Pratt, R.J.2
McLaughlin, M.3
Aramayo, R.4
-
16
-
-
41649115999
-
DCL-1 colocalizes with other components of the MSUD machinery and is required for silencing
-
Alexander WG, Raju NB, Xiao H, Hammond TM, Perdue TD, et al. (2008) DCL-1 colocalizes with other components of the MSUD machinery and is required for silencing. Fungal Genet Biol 45: 719-727.
-
(2008)
Fungal Genet Biol
, vol.45
, pp. 719-727
-
-
Alexander, W.G.1
Raju, N.B.2
Xiao, H.3
Hammond, T.M.4
Perdue, T.D.5
-
17
-
-
26944441255
-
Dicing and slicing: The core machinery of the RNA interference pathway
-
Hammond SM (2005) Dicing and slicing: the core machinery of the RNA interference pathway. FEBS Lett 579: 5822-5829.
-
(2005)
FEBS Lett
, vol.579
, pp. 5822-5829
-
-
Hammond, S.M.1
-
19
-
-
58749097426
-
Small RNAs in transcriptional gene silencing and genome defence
-
Moazed D (2009) Small RNAs in transcriptional gene silencing and genome defence. Nature 457: 413-420.
-
(2009)
Nature
, vol.457
, pp. 413-420
-
-
Moazed, D.1
-
20
-
-
35848962284
-
Transcription and RNAi in heterochromatic gene silencing
-
DOI 10.1038/nsmb1315, PII NSMB1315
-
Buhler M, Moazed D (2007) Transcription and RNAi in heterochromatic gene silencing. Nat Struct Mol Biol 14: 1041-1048. (Pubitemid 350060336)
-
(2007)
Nature Structural and Molecular Biology
, vol.14
, Issue.11
, pp. 1041-1048
-
-
Buhler, M.1
Moazed, D.2
-
21
-
-
0037183856
-
Establishment and maintenance of a heterochromatin domain
-
Hall IM, Shankaranarayana GD, Noma K, Ayoub N, Cohen A, et al. (2002) Establishment and maintenance of a heterochromatin domain. Science 297: 2232-2237.
-
(2002)
Science
, vol.297
, pp. 2232-2237
-
-
Hall, I.M.1
Shankaranarayana, G.D.2
Noma, K.3
Ayoub, N.4
Cohen, A.5
-
22
-
-
0037072660
-
Small RNAs correspond to centromere heterochromatic repeats
-
Reinhart BJ, Bartel DP (2002) Small RNAs correspond to centromere heterochromatic repeats. Science 297: 1831.
-
(2002)
Science
, vol.297
, pp. 1831
-
-
Reinhart, B.J.1
Bartel, D.P.2
-
23
-
-
0038738781
-
RNA interference is required for normal centromere function in fission yeast
-
DOI 10.1023/A:1022815931524
-
Volpe T, Schramke V, Hamilton GL, White SA, Teng G, et al. (2003) RNA interference is required for normal centromere function in fission yeast. Chromosome Res 11: 137-146. (Pubitemid 36461379)
-
(2003)
Chromosome Research
, vol.11
, Issue.2
, pp. 137-146
-
-
Volpe, T.1
Schramke, V.2
Hamilton, G.L.3
White, S.A.4
Teng, G.5
Martienssen, R.A.6
Allshire, R.C.7
-
24
-
-
0037072661
-
Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi
-
DOI 10.1126/science.1074973
-
Volpe TA, Kidner C, Hall IM, Teng G, Grewal SI, et al. (2002) Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi. Science 297: 1833-1837. (Pubitemid 35024336)
-
(2002)
Science
, vol.297
, Issue.5588
, pp. 1833-1837
-
-
Volpe, T.A.1
Kidner, C.2
Hall, I.M.3
Teng, G.4
Grewal, S.I.S.5
Martienssen, R.A.6
-
25
-
-
40649112903
-
RNAi-mediate chromatin silencing in fission yeast
-
White SA, Allshire RC (2009) RNAi-mediate chromatin silencing in fission yeast. Curr Top Microbiol Immunol 329: 157-183.
-
(2009)
Curr Top Microbiol Immunol
, vol.329
, pp. 157-183
-
-
White, S.A.1
Allshire, R.C.2
-
26
-
-
23044470630
-
Drosophila argonaute-2 is required early in embryogenesis for the assembly of centric/centromeric heterochromatin, nuclear division, nuclear migration, and germ-cell formation
-
DOI 10.1101/gad.1316805
-
Deshpande G, Calhoun G, Schedl P (2005) Drosophila argonaute-2 is required early in embryogenesis for the assembly of centric/centromeric heterochromatin, nuclear division, nuclear migration, and germ-cell formation. Genes Dev 19: 1680-1685. (Pubitemid 41058363)
-
(2005)
Genes and Development
, vol.19
, Issue.14
, pp. 1680-1685
-
-
Deshpande, G.1
Calhoun, G.2
Schedl, P.3
-
27
-
-
33845866637
-
H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability
-
Peng JC, Karpen GH (2007) H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability. Nat Cell Biol 9: 25-35.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 25-35
-
-
Peng, J.C.1
Karpen, G.H.2
-
28
-
-
34250735582
-
RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena
-
DOI 10.1101/gad.1544207
-
Liu Y, Taverna SD, Muratore TL, Shabanowitz J, Hunt DF, et al. (2007) RNAidependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena. Genes Dev 21: 1530-1545. (Pubitemid 46955725)
-
(2007)
Genes and Development
, vol.21
, Issue.12
, pp. 1530-1545
-
-
Liu, Y.1
Taverna, S.D.2
Muratore, T.L.3
Shabanowitz, J.4
Hunt, D.F.5
Allis, C.D.6
-
29
-
-
50049120478
-
Study of an RNA helicase implicates small RNA-noncoding RNA interactions in programmed DNA elimination in Tetrahymena
-
Aronica L, Bednenko J, Noto T, DeSouza LV, Siu KW, et al. (2008) Study of an RNA helicase implicates small RNA-noncoding RNA interactions in programmed DNA elimination in Tetrahymena. Genes Dev 22: 2228-2241.
-
(2008)
Genes Dev
, vol.22
, pp. 2228-2241
-
-
Aronica, L.1
Bednenko, J.2
Noto, T.3
DeSouza, L.V.4
Siu, K.W.5
-
30
-
-
53249153462
-
Dynamic nuclear reorganization during genome remodeling of Tetrahymena
-
Chalker DL (2008) Dynamic nuclear reorganization during genome remodeling of Tetrahymena. Biochim Biophys Acta 1783: 2130-2136.
-
(2008)
Biochim Biophys Acta
, vol.1783
, pp. 2130-2136
-
-
Chalker, D.L.1
-
31
-
-
38049155825
-
Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
-
Yu W, Gius D, Ontango P, Muldoon-Jacobs K, Karp J, et al. (2008) Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA. Nature 451: 202-206.
-
(2008)
Nature
, vol.451
, pp. 202-206
-
-
Yu, W.1
Gius, D.2
Ontango, P.3
Muldoon-Jacobs, K.4
Karp, J.5
-
32
-
-
41849131453
-
RNA and transcriptional modulation of gene expression
-
Hawkins PG, Morris KV (2008) RNA and transcriptional modulation of gene expression. Cell Cycle 7: 602-607.
-
(2008)
Cell Cycle
, vol.7
, pp. 602-607
-
-
Hawkins, P.G.1
Morris, K.V.2
-
33
-
-
40649125588
-
RNA-mediated transcriptional gene silencing in human cells
-
Morris KV (2008) RNA-mediated transcriptional gene silencing in human cells. Curr Top Microbiol Immunol 320: 211-224.
-
(2008)
Curr Top Microbiol Immunol
, vol.320
, pp. 211-224
-
-
Morris, K.V.1
-
34
-
-
31044452870
-
Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways
-
DOI 10.1016/j.cell.2005.11.036, PII S0092867405013942
-
Duchaine TF, Wohlschlegel JA, Kennedy S, Bei Y, Conte D Jr, et al. (2006) Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Cell 124: 343-354. (Pubitemid 43121982)
-
(2006)
Cell
, vol.124
, Issue.2
, pp. 343-354
-
-
Duchaine, T.F.1
Wohlschlegel, J.A.2
Kennedy, S.3
Bei, Y.4
Conte Jr., D.5
Pang, K.6
Brownell, D.R.7
Harding, S.8
Mitani, S.9
Ruvkun, G.10
Yates III, J.R.11
Mello, C.C.12
-
35
-
-
33645464445
-
Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans
-
Lee RC, Hammell CM, Ambros V (2006) Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans. RNA 12: 589-597.
-
(2006)
RNA
, vol.12
, pp. 589-597
-
-
Lee, R.C.1
Hammell, C.M.2
Ambros, V.3
-
36
-
-
0029116861
-
Enhancers of glp-1, a gene required for cell-signaling in Caenorhabditis elegans, define a set of genes required for germline development
-
Qiao L, Lissemore JL, Shu P, Smardon A, Gelber MB, et al. (1995) Enhancers of glp-1, a gene required for cell-signaling in Caenorhabditis elegans, define a set of genes required for germline development. Genetics 141: 551-569.
-
(1995)
Genetics
, vol.141
, pp. 551-569
-
-
Qiao, L.1
Lissemore, J.L.2
Shu, P.3
Smardon, A.4
Gelber, M.B.5
-
37
-
-
0034708215
-
EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans
-
DOI 10.1016/S0960-9822(00)00323-7
-
Smardon A, Spoerke JM, Stacey SC, Klein ME, Mackin N, et al. (2000) EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans. Curr Biol 10: 169-178. (Pubitemid 30146781)
-
(2000)
Current Biology
, vol.10
, Issue.4
, pp. 169-178
-
-
Smardon, A.1
Spoerke, J.M.2
Stacey, S.C.3
Klein, M.E.4
MacKin, N.5
Maine, E.M.6
-
38
-
-
34249810892
-
Argonaute Proteins: Mediators of RNA Silencing
-
DOI 10.1016/j.molcel.2007.05.001, PII S1097276507002572
-
Peters L, Meister G (2007) Argonaute proteins: mediators of RNA silencing. Mol Cell 26: 611-623. (Pubitemid 46856239)
-
(2007)
Molecular Cell
, vol.26
, Issue.5
, pp. 611-623
-
-
Peters, L.1
Meister, G.2
-
39
-
-
21044446786
-
Functional genomic analysis of RNA interference in C. elegans
-
DOI 10.1126/science.1109267
-
Kim JK, Gabel HW, Kamath RS, Tewari M, Pasquinelli A, et al. (2005) Functional genomic analysis of RNA interference in C. elegans. Science 308: 1164-1167. (Pubitemid 40696432)
-
(2005)
Science
, vol.308
, Issue.5725
, pp. 1164-1167
-
-
Kim, J.K.1
Gabel, H.W.2
Kamath, R.S.3
Tewari, M.4
Pasquinelli, A.5
Rual, J.-F.6
Kennedy, S.7
Dybbs, M.8
Bertin, N.9
Kaplan, J.M.10
Vidal, M.11
Ruvkun, G.12
-
40
-
-
17044417320
-
Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences
-
DOI 10.1101/gad.332305
-
Robert VJ, Sijen T, van Wolfswinkel J, Plasterk RH (2005) Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences. Genes Dev 19: 782-787. (Pubitemid 40502980)
-
(2005)
Genes and Development
, vol.19
, Issue.7
, pp. 782-787
-
-
Robert, V.J.P.1
Sijen, T.2
Van Wolfswinkel, J.3
Plasterk, R.H.A.4
-
41
-
-
46149092009
-
Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline
-
Das PP, Bagijn MP, Goldstein LD, Woolford JR, Lehrbach NJ, et al. (2008) Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline. Mol Cell 31: 79-90.
-
(2008)
Mol Cell
, vol.31
, pp. 79-90
-
-
Das, P.P.1
Bagijn, M.P.2
Goldstein, L.D.3
Woolford, J.R.4
Lehrbach, N.J.5
-
42
-
-
33750824034
-
Analysis of the C. elegans Argonaute Family Reveals that Distinct Argonautes Act Sequentially during RNAi
-
DOI 10.1016/j.cell.2006.09.033, PII S0092867406012931
-
Yigit E, Batista PJ, Bei Y, Pang KM, Chen CC, et al. (2006) Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi. Cell 127: 747-757. (Pubitemid 44716250)
-
(2006)
Cell
, vol.127
, Issue.4
, pp. 747-757
-
-
Yigit, E.1
Batista, P.J.2
Bei, Y.3
Pang, K.M.4
Chen, C.-C.G.5
Tolia, N.H.6
Joshua-Tor, L.7
Mitani, S.8
Simard, M.J.9
Mello, C.C.10
-
43
-
-
0037015303
-
PPW-1, a PAZ/PIWI protein required for efficient germline RNAi, is defective in a natural isolate of C. elegans
-
DOI 10.1016/S0960-9822(02)01110-7, PII S0960982202011107
-
Tijsterman M, Okihara KL, Thijssen K, Plasterk RH (2002) PPW-1, a PAZ/ PIWI protein required for efficient germline RNAi, is defective in a natural isolate of C. elegans. Curr Biol 12: 1535-1540. (Pubitemid 35036654)
-
(2002)
Current Biology
, vol.12
, Issue.17
, pp. 1535-1540
-
-
Tijsterman, M.1
Okihara, K.L.2
Thijssen, K.3
Plasterk, R.H.A.4
-
44
-
-
45449118682
-
A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis
-
Wang G, Reinke V (2008) A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis. Curr Biol 18: 861-867.
-
(2008)
Curr Biol
, vol.18
, pp. 861-867
-
-
Wang, G.1
Reinke, V.2
-
45
-
-
46149114866
-
PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans
-
Batista PJ, Ruby JG, Claycomb JM, Chiang R, Fahlgren N, et al. (2008) PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans. Mol Cell 31: 67-78.
-
(2008)
Mol Cell
, vol.31
, pp. 67-78
-
-
Batista, P.J.1
Ruby, J.G.2
Claycomb, J.M.3
Chiang, R.4
Fahlgren, N.5
-
46
-
-
37149049127
-
In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans
-
Aoki K, Moriguchi H, Yoshioka T, Okawa K, Tabara H (2007) In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans. EMBO J 26: 5007-5019.
-
(2007)
EMBO J
, vol.26
, pp. 5007-5019
-
-
Aoki, K.1
Moriguchi, H.2
Yoshioka, T.3
Okawa, K.4
Tabara, H.5
-
47
-
-
48249091655
-
An Argonaute transports siRNAs from the cytoplasm to the nucleus
-
Guang S, Bochner AF, Pavelec DM, Burkhart KB, Harding S, et al. (2008) An Argonaute transports siRNAs from the cytoplasm to the nucleus. Science 321: 537-541.
-
(2008)
Science
, vol.321
, pp. 537-541
-
-
Guang, S.1
Bochner, A.F.2
Pavelec, D.M.3
Burkhart, K.B.4
Harding, S.5
-
48
-
-
17844364875
-
Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing
-
DOI 10.1016/S0092-8674(01)00431-7
-
Grishok A, Pasquinelli AE, Conte D, Li N, Parrish S, et al. (2001) Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell 106: 23-34. (Pubitemid 32709955)
-
(2001)
Cell
, vol.106
, Issue.1
, pp. 23-34
-
-
Grishok, A.1
Pasquinelli, A.E.2
Conte, D.3
Li, N.4
Parrish, S.5
Ha, I.6
Baillie, D.L.7
Fire, A.8
Ruvkun, G.9
Mello, C.C.10
-
49
-
-
0043202980
-
A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans
-
Vastenhouw NL, Fischer SE, Robert VJ, Thijssen KL, Fraser AG, et al. (2003) A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans. Curr Biol 13: 1311-1316.
-
(2003)
Curr Biol
, vol.13
, pp. 1311-1316
-
-
Vastenhouw, N.L.1
Fischer, S.E.2
Robert, V.J.3
Thijssen, K.L.4
Fraser, A.G.5
-
50
-
-
0037188904
-
The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans
-
Tabara H, Yigit E, Siomi H, Mello CC (2002) The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans. Cell 109: 861-871.
-
(2002)
Cell
, vol.109
, pp. 861-871
-
-
Tabara, H.1
Yigit, E.2
Siomi, H.3
Mello, C.C.4
-
52
-
-
0037067659
-
Recruitment of O-GlcNAc transferase to promoters by corepressor mSin3A: Coupling protein O-GlcNAcylation to transcriptional repression
-
DOI 10.1016/S0092-8674(02)00810-3
-
Yang X, Zhang F, Kudlow JE (2002) Recruitment of O-GlcNAc transferase to promoters by corepressor mSin3A: coupling protein O-GlcNAcylation to transcriptional repression. Cell 110: 69-80. (Pubitemid 34874607)
-
(2002)
Cell
, vol.110
, Issue.1
, pp. 69-80
-
-
Yang, X.1
Zhang, F.2
Kudlow, J.E.3
-
53
-
-
0036570006
-
Germline X chromosomes exhibit contrasting patterns of histone H3 methylation in Caenorhabditis elegans
-
DOI 10.1006/dbio.2002.0634
-
Reuben M, Lin R (2002) Germline X chromosomes exhibit contrasting patterns of histone H3 methylation in Caenorhabditis elegans. Dev Biol 245: 71-82. (Pubitemid 34461804)
-
(2002)
Developmental Biology
, vol.245
, Issue.1
, pp. 71-82
-
-
Reuben, M.1
Lin, R.2
-
54
-
-
23344449411
-
EGO-1, a putative RNA-directed RNA polymerase, promotes germline proliferation in parallel with GLP-1/Notch signaling and regulates the spatial organization of nuclear pore complexes and germline P granules in Caenorhabditis elegans
-
DOI 10.1534/genetics.105.042135
-
Vought VE, Ohmachi M, Lee MH, Maine EM (2005) EGO-1, a putative RNAdirected RNA polymerase, promotes germline proliferation in parallel with GLP-1/Notch signaling and regulates the spatial organization of nuclear pore complexes and germline P granules in Caenorhabditis elegans. Genetics 170: 1121-1132. (Pubitemid 41105468)
-
(2005)
Genetics
, vol.170
, Issue.3
, pp. 1121-1132
-
-
Vought, V.E.1
Ohmachi, M.2
Lee, M.-H.3
Maine, E.M.4
-
55
-
-
1542298437
-
Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions
-
DOI 10.1371/journal.pbio.0000012
-
Simmer F, Moorman C, van der Linden AM, Kuijk E, van den Berghe PV, et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: e12. doi:10.1371/journal. pbio.0000012. (Pubitemid 39112194)
-
(2003)
PLoS Biology
, vol.1
, Issue.1
-
-
Simmer, F.1
Moorman, C.2
Van Der Linden, A.M.3
Kuijk, E.4
Van Den Berghe, P.V.E.5
Kamath, R.S.6
Fraser, A.G.7
Ahringer, J.8
Plasterk, R.H.A.9
-
56
-
-
34548433975
-
Dicer-related drh-3 gene functions in germ-line development by maintenance of chromosomal integrity in Caenorhabditis elegans
-
DOI 10.1111/j.1365-2443.2007.01111.x
-
Nakamura M, Ando R, Nakazawa T, Yudazono T, Tsutsumi N, et al. (2007) Dicer-related drh-3 gene functions in germ-line development by maintenance of chromosomal integrity in Caenorhabditis elegans. Genes Cells 12: 997-1010. (Pubitemid 47365672)
-
(2007)
Genes to Cells
, vol.12
, Issue.9
, pp. 997-1010
-
-
Nakamura, M.1
Ando, R.2
Nakazawa, T.3
Yudazono, T.4
Tsutsumi, N.5
Hatanaka, N.6
Ohgake, T.7
Hanaoka, F.8
Eki, T.9
-
57
-
-
0042528744
-
Chromosome choreography: The meiotic ballet
-
Page SL, Hawley RS (2003) Chromosome choreography: the meiotic ballet. Science 301: 785-789.
-
(2003)
Science
, vol.301
, pp. 785-789
-
-
Page, S.L.1
Hawley, R.S.2
-
58
-
-
0037448540
-
Systematic functional analysis of the Caenorhabditis elegans genome using RNAi
-
DOI 10.1038/nature01278
-
Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-237. (Pubitemid 36139121)
-
(2003)
Nature
, vol.421
, Issue.6920
, pp. 231-237
-
-
Kamath, R.S.1
Fraser, A.G.2
Dong, Y.3
Poulin, G.4
Durbin, R.5
Gotta, M.6
Kanapin, A.7
Le Bot, N.8
Moreno, S.9
Sohrmann, M.10
Welchman, D.P.11
Zipperien, P.12
Ahringer, J.13
-
59
-
-
0035128859
-
Large-scale analysis of gene function in Caenorhabditis elegans by high-throughput RNAi
-
DOI 10.1016/S0960-9822(01)00052-5
-
Maeda I, Kohara Y, Yamamoto M, Sugimoto A (2001) Large-scale analysis of gene function in Caenorhabditis elegans by high-throughput RNAi. Curr Biol 11: 171-176. (Pubitemid 32152101)
-
(2001)
Current Biology
, vol.11
, Issue.3
, pp. 171-176
-
-
Maeda, I.1
Kohara, Y.2
Yamamoto, M.3
Sugimoto, A.4
-
60
-
-
15844431376
-
Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans
-
DOI 10.1038/nature03353
-
Sonnichsen B, Koski LB, Walsh A, Marschall P, Neumann B, et al. (2005) Fullgenome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-469. (Pubitemid 40477050)
-
(2005)
Nature
, vol.434
, Issue.7032
, pp. 462-469
-
-
Sonnichsen, B.1
Koski, L.B.2
Walsh, A.3
Marschall, P.4
Neumann, B.5
Brehm, M.6
Alleaume, A.-M.7
Artelt, J.8
Bettencourt, P.9
Cassin, E.10
Hewitson, M.11
Holz, C.12
Khan, M.13
Lazik, S.14
Martin, C.15
Nitzsche, B.16
Ruer, M.17
Stamford, J.18
Winzi, M.19
Heinkel, R.20
Roder, M.21
Finell, J.22
Hantsch, H.23
Jones, S.J.M.24
Jones, M.25
Piano, F.26
Gunsalus, K.C.27
Oegema, K.28
Gonczy, P.29
Coulson, A.30
Hyman, A.A.31
Echeverri, C.J.32
more..
-
61
-
-
38449105177
-
A genome-wide survey and systematic RNAi-based characterization of helicase-like genes in Caenorhabditis elegans
-
Eki T, Ishihara T, Katsura I, Hanaoka F (2007) A genome-wide survey and systematic RNAi-based characterization of helicase-like genes in Caenorhabditis elegans. DNA Res 14: 183-199.
-
(2007)
DNA Res
, vol.14
, pp. 183-199
-
-
Eki, T.1
Ishihara, T.2
Katsura, I.3
Hanaoka, F.4
-
62
-
-
20244369068
-
New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones
-
DOI 10.1101/gr.3194805
-
Fernandez AG, Gunsalus KC, Huang J, Chuang LS, Ying N, et al. (2005) New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones. Genome Res 15: 250-259. (Pubitemid 40309389)
-
(2005)
Genome Research
, vol.15
, Issue.2
, pp. 250-259
-
-
Fernandez, A.G.1
Gunsalus, K.C.2
Huang, J.3
Chuang, L.-S.4
Ying, N.5
Liang, H.-L.6
Tang, C.7
Schetter, A.J.8
Zegar, C.9
Rual, J.-F.10
Hill, D.E.11
Reinke, V.12
Vidal, M.13
Piano, F.14
-
63
-
-
45149109796
-
The Caenorhabditis elegans ekl (enhancer of ksr-1 lethality) genes include putative components of a germline small RNA pathway
-
Rocheleau CE, Cullison K, Huang K, Bernstein Y, Spilker AC, et al. (2008) The Caenorhabditis elegans ekl (enhancer of ksr-1 lethality) genes include putative components of a germline small RNA pathway. Genetics 178: 1431-1443.
-
(2008)
Genetics
, vol.178
, pp. 1431-1443
-
-
Rocheleau, C.E.1
Cullison, K.2
Huang, K.3
Bernstein, Y.4
Spilker, A.C.5
-
64
-
-
34547654174
-
Meiotic recombination in Caenorhabditis elegans
-
Garcia-Muse T, Boulton SJ (2007) Meiotic recombination in Caenorhabditis elegans. Chromosome Res 15: 607-621.
-
(2007)
Chromosome Res
, vol.15
, pp. 607-621
-
-
Garcia-Muse, T.1
Boulton, S.J.2
-
65
-
-
58149198800
-
Homologue pairing, recombination, and segregation in Caenorhabditis elegans
-
Zetka M (2009) Homologue pairing, recombination, and segregation in Caenorhabditis elegans. Genome Dyn 5: 43-55.
-
(2009)
Genome Dyn
, vol.5
, pp. 43-55
-
-
Zetka, M.1
-
66
-
-
0037106122
-
Synapsis-dependent and -independent mechanisms stabilize homolog pairing during meiotic prophase in C. elegans
-
DOI 10.1101/gad.1011602
-
MacQueen AJ, Colaiacovo MP, McDonald K, Villeneuve AM (2002) Synapsisdependent and -independent mechanisms stabilize homolog pairing during meiotic prophase in C. elegans. Genes Dev 16: 2428-2442. (Pubitemid 35034411)
-
(2002)
Genes and Development
, vol.16
, Issue.18
, pp. 2428-2442
-
-
MacQueen, A.J.1
Colaiacovo, M.P.2
McDonald, K.3
Villeneuve, A.M.4
-
67
-
-
0033200331
-
Synapsis and chiasma formation in Caenorhabditis elegans require HIM-3, a meiotic chromosome core component that functions in chromosome segregation
-
DOI 10.1101/gad.13.17.2258
-
Zetka M, Kawasaki I, Strome S, Müller F (1999) Synapsis and chiasma formation in Caenorhabditis elegans require HIM-3, a meiotic chromosome core component that functions in chromosome segregation. Genes Dev 13: 2258-2270. (Pubitemid 29426730)
-
(1999)
Genes and Development
, vol.13
, Issue.17
, pp. 2258-2270
-
-
Zetka, M.C.1
Kawasaki, I.2
Strome, S.3
Muller, F.4
-
68
-
-
14744274614
-
Crossing over is coupled to late meiotic prophase bivalent differentiation through asymmetric disassembly of the SC
-
DOI 10.1083/jcb.200410144
-
Nabeshima K, Villeneuve AM, Colaiacovo MP (2005) Crossing over is coupled to late meiotic prophase bivalent differentiation through asymmetric disassembly of the SC. J Cell Biol 168: 683-689. (Pubitemid 40328152)
-
(2005)
Journal of Cell Biology
, vol.168
, Issue.5
, pp. 683-689
-
-
Nabeshima, K.1
Villeneuve, A.M.2
Colaiacovo, M.P.3
-
69
-
-
4644343941
-
C. elegans HIM-17 links chromatin modification and competence for initiation of meiotic recombination
-
Reddy KC, Villeneuve AM (2004) C. elegans HIM-17 links chromatin modification and competence for initiation of meiotic recombination. Cell 118: 439-452.
-
(2004)
Cell
, vol.118
, pp. 439-452
-
-
Reddy, K.C.1
Villeneuve, A.M.2
-
70
-
-
14844361808
-
Multisite protein modification and intramolecular signaling
-
Yang XJ (2005) Multisite protein modification and intramolecular signaling. Oncogene 24: 1653-1662.
-
(2005)
Oncogene
, vol.24
, pp. 1653-1662
-
-
Yang, X.J.1
-
71
-
-
33645502395
-
Tudor, MBT and chromo domains gauge the degree of lysine methylation
-
Kim J, Daniel J, Espejo A, Lake A, Krishna M, et al. (2006) Tudor, MBT and chromo domains gauge the degree of lysine methylation. EMBO Rep 7: 397-403.
-
(2006)
EMBO Rep
, vol.7
, pp. 397-403
-
-
Kim, J.1
Daniel, J.2
Espejo, A.3
Lake, A.4
Krishna, M.5
-
72
-
-
33847247383
-
Docking onto chromatin via the Saccharomyces cerevisiae Rad9 Tudor domain
-
DOI 10.1002/yea.1441
-
Grenon M, Costelloe T, Jimeno S, O'Shaughness A, Fitzgerald J, et al. (2007) Docking onto chromatin via the Saccharomyces cerevisiae Rad9 Tudor domain. Yeast 24: 105-119. (Pubitemid 46322382)
-
(2007)
Yeast
, vol.24
, Issue.2
, pp. 105-119
-
-
Grenon, M.1
Costelloe, T.2
Jimeno, S.3
O'Shaughnessy, A.4
Fitzgerald, J.5
Zgheib, O.6
Degerth, L.7
Lowndes, N.F.8
-
73
-
-
0037012881
-
Large-scale transcriptional activity in chromosomes 21 and 22
-
Kapranov P, Cawley SE, Drenkow J, Bekiranov S, Strausberg RL, et al. (2002) Large-scale transcriptional activity in chromosomes 21 and 22. Science 296: 916-919.
-
(2002)
Science
, vol.296
, pp. 916-919
-
-
Kapranov, P.1
Cawley, S.E.2
Drenkow, J.3
Bekiranov, S.4
Strausberg, R.L.5
-
74
-
-
21044431735
-
Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution
-
DOI 10.1126/science.1108625
-
Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al. (2005) Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. Science 308: 1149-1154. (Pubitemid 40696429)
-
(2005)
Science
, vol.308
, Issue.5725
, pp. 1149-1154
-
-
Cheng, J.1
Kapranov, P.2
Drenkow, J.3
Dike, S.4
Brubaker, S.5
Patel, S.6
Long, J.7
Stern, D.8
Tammana, H.9
Helt, G.10
Sementchenko, V.11
Piccolboni, A.12
Bekiranov, S.13
Bailey, D.K.14
Ganesh, M.15
Ghosh, S.16
Bell, I.17
Gerhard, D.S.18
Gingeras, T.R.19
-
75
-
-
33745286231
-
TUF love for "junk" DNA
-
Willingham AT, Gingeras TR (2006) TUF love for "junk" DNA. Cell 125: 1215-1220.
-
(2006)
Cell
, vol.125
, pp. 1215-1220
-
-
Willingham, A.T.1
Gingeras, T.R.2
-
76
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
DOI 10.1038/nature05874, PII NATURE05874
-
ENCODE Project Consortium, Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447: 799-816. (Pubitemid 46920138)
-
(2007)
Nature
, vol.447
, Issue.7146
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
Guigo, R.4
Gingeras, T.R.5
Margulies, E.H.6
Weng, Z.7
Snyder, M.8
Dermitzakis, E.T.9
Thurman, R.E.10
Kuehn, M.S.11
Taylor, C.M.12
Neph, S.13
Koch, C.M.14
Asthana, S.15
Malhotra, A.16
Adzhubei, I.17
Greenbaum, J.A.18
Andrews, R.M.19
Flicek, P.20
Boyle, P.J.21
Cao, H.22
Carter, N.P.23
Clelland, G.K.24
Davis, S.25
Day, N.26
Dhami, P.27
Dillon, S.C.28
Dorschner, M.O.29
Fiegler, H.30
Giresi, P.G.31
Goldy, J.32
Hawrylycz, M.33
Haydock, A.34
Humbert, R.35
James, K.D.36
Johnson, B.E.37
Johnson, E.M.38
Frum, T.T.39
Rosenzweig, E.R.40
Karnani, N.41
Lee, K.42
Lefebvre, G.C.43
Navas, P.A.44
Neri, F.45
Parker, S.C.J.46
Sabo, P.J.47
Sandstrom, R.48
Shafer, A.49
Vetrie, D.50
Weaver, M.51
Wilcox, S.52
Yu, M.53
Collins, F.S.54
Dekker, J.55
Lieb, J.D.56
Tullius, T.D.57
Crawford, G.E.58
Sunyaev, S.59
Noble, W.S.60
Dunham, I.61
Denoeud, F.62
Reymond, A.63
Kapranov, P.64
Rozowsky, J.65
Zheng, D.66
Castelo, R.67
Frankish, A.68
Harrow, J.69
Ghosh, S.70
Sandelin, A.71
Hofacker, I.L.72
Baertsch, R.73
Keefe, D.74
Dike, S.75
Cheng, J.76
Hirsch, H.A.77
Sekinger, E.A.78
Lagarde, J.79
Abril, J.F.80
Shahab, A.81
Flamm, C.82
Fried, C.83
Hackermuller, J.84
Hertel, J.85
Lindemeyer, M.86
Missal, K.87
Tanzer, A.88
Washietl, S.89
Korbel, J.90
Emanuelsson, O.91
Pedersen, J.S.92
Holroyd, N.93
Taylor, R.94
Swarbreck, D.95
Matthews, N.96
Dickson, M.C.97
Thomas, D.J.98
Weirauch, M.T.99
more..
-
77
-
-
0037022533
-
C. elegans ksr-1 and ksr-2 have both unique and redundant functions and are required for MPK-1 ERK phosphorylation
-
DOI 10.1016/S0960-9822(02)00690-5, PII S0960982202006905
-
Ohmachi M, Rocheleau CE, Church D, Lambie E, Schedl T, et al. (2002) C. elegans ksr-1 and ksr-2 have both unique and redundant functions and are required for MPK-1 ERK phosphorylation. Curr Biol 12: 427-433. (Pubitemid 34209292)
-
(2002)
Current Biology
, vol.12
, Issue.5
, pp. 427-433
-
-
Ohmachi, M.1
Rocheleau, C.E.2
Church, D.3
Lambie, E.4
Schedl, T.5
Sundaram, M.V.6
-
78
-
-
33845436047
-
Large-Scale Sequencing Reveals 21U-RNAs and Additional MicroRNAs and Endogenous siRNAs in C. elegans
-
DOI 10.1016/j.cell.2006.10.040, PII S0092867406014681
-
Ruby JG, Jan C, Player C, Axtell MJ, Lee W, et al. (2006) Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans. Cell 127: 1193-1207. (Pubitemid 44894525)
-
(2006)
Cell
, vol.127
, Issue.6
, pp. 1193-1207
-
-
Ruby, J.G.1
Jan, C.2
Player, C.3
Axtell, M.J.4
Lee, W.5
Nusbaum, C.6
Ge, H.7
Bartel, D.P.8
-
79
-
-
0016063911
-
The genetics of Caenorhabditis elegans
-
Brenner S (1974) The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
-
(1974)
Genetics
, vol.77
, pp. 71-94
-
-
Brenner, S.1
-
80
-
-
0035941485
-
Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans
-
DOI 10.1016/S0378-1119(00)00579-5, PII S0378111900005795
-
Timmons L, Court DL, Fire A (2001) Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans. Gene 263: 103-112. (Pubitemid 32167059)
-
(2001)
Gene
, vol.263
, Issue.1-2
, pp. 103-112
-
-
Timmons, L.1
Court, D.L.2
Fire, A.3
-
81
-
-
34548406524
-
The Bro1-domain protein, EGO-2, promotes Notch signaling in Caenorhabditis elegans
-
DOI 10.1534/genetics.107.071225
-
Liu Y, Maine EM (2007) The Bro1-domain protein, EGO-2, promotes Notch signaling in Caenorhabditis elegans. Genetics 176: 2265-2277. (Pubitemid 47360658)
-
(2007)
Genetics
, vol.176
, Issue.4
, pp. 2265-2277
-
-
Liu, Y.1
Maine, E.M.2
-
82
-
-
0032493878
-
Meiotic recombination in C. elegans initiates by a conserved mechanism and is dispensable for homologous chromosome synapsis
-
DOI 10.1016/S0092-8674(00)81481-6
-
Dernburg AF, McDonald K, Moulder G, Barstead R, Dresser M, et al. (1998) Meiotic recombination in C. elegans initiates by a conserved mechanism and is dispensable for homologous chromosome synapsis. Cell 94: 387-398. (Pubitemid 28376082)
-
(1998)
Cell
, vol.94
, Issue.3
, pp. 387-398
-
-
Dernburg, A.F.1
McDonald, K.2
Moulder, G.3
Barstead, R.4
Dresser, M.5
Villeneuve, A.M.6
-
83
-
-
0028796703
-
Gld-1, a tumor suppressor gene required for oocyte development in Caenorhabditis elegans
-
Francis R, Barton MK, Kimble J, Schedl T (1995) gld-1, a tumor suppressor gene required for oocyte development in Caenorhabditis elegans. Genetics 139: 579-606.
-
(1995)
Genetics
, vol.139
, pp. 579-606
-
-
Francis, R.1
Barton, M.K.2
Kimble, J.3
Schedl, T.4
|